gi|384452082|ref|NC_017290.1|  Chlamydophila psittaci 08DC60 chromosome, complete genome. 1172032, gc%: 39.05%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
complement(367806..369395)         PHAGE_Plankt_PaV_LD_NC_016564: ABC transporter; CPS0D_0356; phage(gi371496158)       1.59e-08            Chlamydophilapsittaci08DC60MSIVLDKIGKTLGTRVLFDDVSVVFNPGNRYGLTGPNGAGKSTLLKIITGCVEPTRGSISLPKKVGILRQNIDSFGDVSVLDCVIMGNARLWDALQKRDALYLEEFTDAIGIKLGEMEEIIGEENGYRAESEAEELLTGIGIPEALFNNKMSTIPIDLQFRVLLCQSLFGHPEALLLDEPTNHLDIHSINWLGNFLKDYDGTVIVVSHDRHFLNTITTHIADIDYDTVIIYPGNYDAMVEMKTASRDQEKADIKSKEKKIAQLKEFVAKFGAGSRASQVQSRLREIKKLQPQELKKSNIQRPYIRFPLSEKASGKIVFSLEGITKSYNDEAHLFQPFSLEIYQGDKLGIIGNNGLGKTTLMKLLAGVESPTQGSIKTGHQVAYSYFPQNHSDVLKDCGDETLFEWLRNRKTGINDQEIRSVLGKMLFGGDDAFKKIKALSGGETARLLMAGMMLENHNTLILDEANNHLDLESVSALAWAINDYKGTSIFVSHDRTLIEECATKLLIFEKGKITFFDGTMADYTSSRKL
complement(369448..370386)         PHAGE_Bacill_Mgbh1_NC_041879: hypothetical protein; CPS0D_0357; phage(gi100037)      5.38e-28            Chlamydophilapsittaci08DC60MVSAFYAFLDYLKNIKTASPHTLRNYCIDLNDFKNFLEKHGELTPSPPICLVTKERQEAELPFSLLTKDAVRLYILKLMQENKAKRTIKRRLSAIKSFSQYCVKHRILPEDPTETIQGPRLPKELPSPITYEQVEILMATPDLSKYTGFRDRCLLELFYSSGLRISEIVAINHWDIDFTSHLIRIRGKGKKERLVPMTPHAAQWLQQYLTHPARTGIEKDSQAIFLNRFGKRLTTRSIDRKFQKYLRQSGLSGNITPHTIRHTIATHWLENGMDLKTIQALLGHSSLETTTIYTHVSMKLKKQTHDESHPHS
complement(370431..371351)         ribonuclease Z; CPS0D_0358                                                           N/A                 Chlamydophilapsittaci08DC60MSCRELVILGCSSQQPTRTRNQGAYLFRWNNEGLLFDPGEGTQRQFIFANIAPTVVSRIFISHFHGDHCLGLGSMLMRLNLDKVTHPIHCYYPASGKKYFDRLRYGTIYHETINVIEHPIDKEGIVEDFGNFRIEARKLNHLVDTLGWRITEPDTVKFIPEKIKAAGLRGPIMQDLLRNEQVTVNGKTLYLKDLSYIRKGDSIAVIADTLPCPSIVDLAKNARIMLCESTYLEEHRHLAESHYHMTAKQAATQALAAGAQQLVLTHFSARYLNSKEFEIEAGKIFPNVTAAEEFRSYPFPKNPSSK
complement(371455..372129)         incA family protein; CPS0D_0359                                                      N/A                 Chlamydophilapsittaci08DC60MTPSKLVPDATVPKNQTSCTITRNSEQKTESSQKNRLIISISILILALLAVIMIGGFIAALFSPKGIYIGIAALISLLIGIILFPLIITCSSKPPVAHIRPRDLDLSKLDVRYNRLLHETIKEDEKKYAKEQEAKLQRRQRRSLRTLPRRKQVKASSSDEVQKPRRRTSSVLNLIRSRNSSSPSSNSSSLDSDDSSSDHNTQQPIVLPKPVFPKKYENYMHCID
complement(372267..374723)         PHAGE_Agroba_Atu_ph07_NC_042013: putative virion structural protein; CPS0D_0360; phage(gi100292)     8.90e-05            Chlamydophilapsittaci08DC60MDSTINNDSQILDPNPEEVEKLLDESEEVEEKSDDRSLPSDLFILPLNKRPFFPGMAAPILIESGPYYEVLKLLAKSSQKYIGLVLTKKEDADILKVGFNQLYSVGVAARILRIMPIEGGSAQILLSIEERIRIVEPLKDKYLKARVSYHKDNKELTEELKAYSISIVSVIKDLLKLNPLFKEELQIFLGHSDFTEPGKLADFSVALTTATREELQEVLETTNMHDRIDKALILLKKELDLSRLQSSINQKIEATITKSQKEFFLKEQLKTIKKELGLEKEDRAIDLEKFMNRLKKRQVPDYAMEVIQDEIEKLQTLETSSAEYTVCRNYLDWLTIIPWGIQSKEYHDLKKAEIILNKDHYGLEDIKQRILELISVGKLSKGLKGSIICLVGPPGVGKTSIGRSIAKVLHRKFFRFSVGGMRDEAEIKGHRRTYIGAMPGKMVQALKQSQAMNPVIMIDEVDKIGASYHGDPASALLEVLDPEQNKDFLDHYLDVRVDLSNVLFILTANVLDTIPDPLLDRMEILRLSGYILEEKLQIATKYLVPRARKEMGLTAREIVFQPEALKHMINNYAREAGVRTLNGNIKKVLRKVALKIVKNQEKAHPKHTQYKINVKNLQDYLGKPIFSSDRFYDHTPVGVATGLAWTSLGGATLYIESVQVPSMKTDMHLTGQAGDVMKESSQIAWTYLHSALERYAPGYSFFPKSQVHIHIPEGATPKDGPSAGVTMVTSLLSLLLDTPILENLGMTGEITLTGRVLGVGGIREKLIAARRSRLNVLIFPEDNRRDYEELPAYLKKGLKIHFVAHYDDVFKVAFPHIN
375371..376012                     PROPHAGE_Escher_MG1655: protease specific for Gcp(YgjD), essential for nucleoid maintanence; CPS0D_0361; phage(gi16129761)     1.62e-05            Chlamydophilapsittaci08DC60MHFHRYVIIDTSGYQPFLAYVDHQKVLKQWDLPVGPDQGLVLEFIFKNSSLSFQGIGVAAGPGNFSATRVGLSFAQGLALSRKVPMIGYSSLEGYLTPKDKGKALMLPLGKKGGVLTLSSDLSEDGFIHDKNGVGPGILLPYEEASKYCLANNCYHVVSPNPQLFIDSFSNRIRIEKAVPSIDHIRRNVVSQLMLLECSQQLTPDYRSCSCFF
376211..376387                     30S ribosomal protein S21; CPS0D_0362                                                N/A                 Chlamydophilapsittaci08DC60MPSVKVRVGEPVDRALRILKKKVDKEGILKAAKAHRFYDKPSVKKRAKSKAAAKYRSR
376417..377592                     PHAGE_Agroba_Atu_ph07_NC_042013: putative virion structural protein; CPS0D_0363; phage(gi100293)     3.70e-15            Chlamydophilapsittaci08DC60MDYYDVLGVSKTASPEEIKKSYRKLAVKYHPDKNPGDAEAEKRFKEVSEAYEVLSDPQKRESYDRYGKDGPFAGAGGFGGAGMGNMEDALRTFMGAFGGEFGGGGSFFEGLFGGLGEAFGMRGDPAGARQGASKKVHITLTFEEAARGVNKELLVSGYKTCETCSGSGAASKQGIKCCDRCKGSGQIVQSRGFFSMASTCPECGGEGRIITDPCSNCRGQGRIKDKRSVHVQIPAGVDSGMRLKMEGYGDAGQNGAPAGDLYVFIDVEAHPVFERRGDDLILELPIGFVDAALGMKKEVPTLLKESACRLTVPEGIQSGTILKIKNQGFPNVHGRGRGDLLVRVSVETPQNLSEEQKELLRKFAATEKAENFPKKRSFLDKIKGFFSDFTV
377627..379663                     PHAGE_Synech_S_SM2_NC_015279: transketolase central region-containing protein; CPS0D_0364; phage(gi326781943)     3.33e-10            Chlamydophilapsittaci08DC60MVAIQHELGSSIKEVLKLVWGLRFAENKMLLLSRQSDSGGTFQLSCAGHELVGVVAGKSLIPGKDWSFPYYRDQGFPVGLGCDLSEIFASFLARLAPNHSSGRMMPYHYSHKKLRICCQSSVVGSQFLQAAGRAWAVKHTKSNEVVYVSGGDGSTSQGEFHEMLNYVALHKLPVVTVIQNNAWAISVPFKDQCSTDLVRLGESYQGLSVYEVDGGDYFELVDTFSKAVDQARHASVPALILVNVMRLEPHSNSDNHEKYRSREDLDHCKSNDPLVRLERLMIDECGISPAEILDIKAEAEFEVTRACEIAEGMPFPSKGSTSHDVFSPHTTSLIDYENSLEAQRLRDTQPKVMRDAITEALIEEMSRDSGVVVFGEDVAGDKGGVFGVTRGLTDRFGIERCFNTPLAEATIIGTAIGMAMDGIHKPVAEIQFADYIWPGINQLFSEASSIYYRSAGEWEVPLVIRAPCGGYIQGGPYHSQSIEAFLAHCPGIKVAYPSNAADAKALLKAAIRDPNPVVFLEHKALYQRRIFSACPVFSSDYVLPFGKAAITQVGSDLTIVSWGMSLVMSMEVAKELAALGISVEVIDLRTIVPCDFSTVIESVKKTSKLLIAHEASEFCGFGGELAATVAEQAYAYLDAPIRRVAGLHAPVPYSKILENEVLPQKEKIFQAAKSLAEF
