gi|387137613|ref|NC_017307.1|  Corynebacterium pseudotuberculosis CIP 52.97 chromosome, complete 2320595, gc%: 52.14%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
428215..428889                     PROPHAGE_Escher_MG1655: protease specific for Gcp(YgjD), essential for nucleoid maintanence; CpCIP5297_0427; phage(gi16129761)     9.05e-13            CorynebacteriumpseudotuberculosisCIP5297MLVLALDTATPDLIVGLVRVTSDTDTGVVVAQRILTDSRQHNELLTPTVVEILEESGQKFADIDRIVVGCGPGPFTGLRVGMVTAAAFGDALGIPVHGVCTHDAIANQLDGQALVATDARRKEIYWSLYSDGVRTMGPGIVAPTELSIPSRISTVSIPEKLGQLLPGPLRDVPQVNLRPLPECLVAVADFSQTPEPLEPLYLRRPDAKEPAPKPRSSAIPKVEI
428890..429381                     Ribosomal-protein-alanine N-acetyltransferase; CpCIP5297_0428                        N/A                 CorynebacteriumpseudotuberculosisCIP5297MFLRELTAADAPRCAELETLLFSEENPWSVEDLRAAINHSHTLYIAVVDSLEKGLILGYAGLAMLGPAHDPEFEIHTIGVDPQFQRQGVARLMMDNITFVADRAAGPVFLEVRTTNEPAIRLYESYGFERQGVRKNYYQPSGADAYVMMRTPSAVESNEESGK
429383..430438                     PROPHAGE_Escher_MG1655: glycation-binding protein, predicted protease/chaperone; essential for genome maintenance; CpCIP5297_0429; phage(gi16130960)     6.44e-75            CorynebacteriumpseudotuberculosisCIP5297MIVLGIESSCDETGVGIIELSPDGSMRILADAVASSMEEHARFGGVVPEIASRAHLEAMVPVMRQALDAAGVDKPDAVAATVGPGLAGALLVGASAAKAYAAAWDVPFYGVNHLGGHVAVANLEGEELPHSIALLVSGGHSQLLEVQAVGKPMKELGSTLDDAAGEAYDKVARLLGLGYPGGPVIDKLAARGNRKAIRFPRGLSRADDLRGEHRYNFSFSGLKTSVARYVEKAEREQSVISVEDVCASFQEAVCDVLTHKAILACQDTGAKVLLLGGGVAANSRLRELAAARCQTAGIELRVPRFKLCTDNGVMIAAVAAQLIHEGAPQSGLRIGTDTSLEVEIPLVYAAT
430600..430896                     PHAGE_Bacill_0305phi8_36_NC_009760: GroES; CpCIP5297_0430; phage(gi156564025)        3.57e-17            CorynebacteriumpseudotuberculosisCIP5297MANVNIKPLEDRVLVQISEAETTTASGLVIPDSAKEKPQEGVVVAAGPGRFDGDDRVPMDIKEGDTVVFSKYGGTELKYNGEEYLLLNARDVLAIIEK
430908..432530                     PHAGE_Cellul_phi14:2_NC_021806: chaperonin GroEL; CpCIP5297_0431; phage(gi526178751)     3.62e-96            CorynebacteriumpseudotuberculosisCIP5297MAKLIAFNQEAREGILKGVDTLANAVKVTLGPRGRNVVLEKAFGSPTVTNDGVTIAREIDVEDRFENLGVQLVKSVAVKTNDIAGDGTTTATLLAQAVITEGLRNVAAGANPVELNRGILAAADKAVEKLGERAAEVASAADIANVATVSSRDAEIGDMVAAAMEKVGKDGVVTVEESQSIESYLDVTEGVSFDKGYLSPYFITDTDSQRAELDDPYILLVRNKISSLPDFLPLLEKTVEANKPVLIIAEDVEGEPLQTLVVNSIRKTLRAVAVKSPYFGERRKAFMDDLAVVTNATVVDPEVGINLNEAGVEVFGTARRVTVTKDETIIVDGAGTSEAVENRRQQIRREIENTDSSWDREKAEERLAKLSGGVAVIKVGAATETEVSERKLRVEDAINAARAAAQEGVIAGGGSALVQIAKELRVYAEEFEGDAKVGVNALANALSKPAYWIADNAGLDGAVVVSKIADLPNGEGFNAATLEYGNLIEQGIIDPVKVTHSAVVNATSVARMVLTTEASVVEKPVEAKPQAGGHHHHHHH
432596..432787                     hypothetical protein; CpCIP5297_0432                                                 N/A                 CorynebacteriumpseudotuberculosisCIP5297MDDGSLNKLWLSRASSIALLRVPIRKDLPIFHKVQRIGEHVACNSSAPDTRNKFLLPGVHGTV
432909..433001                     hypothetical protein; CpCIP5297_0433                                                 N/A                 CorynebacteriumpseudotuberculosisCIP5297MKGNSLYQWYVVGGKADSEHEEAAFLIVRA
433208..433798                     PHAGE_Bacill_Glittering_NC_022766: RNA polymerase sigma factor; CpCIP5297_0434; phage(gi568191091)     7.22e-05            CorynebacteriumpseudotuberculosisCIP5297MRMMEEKGLAVAETETELSSLVPRAAGGDSRSLQRVISIIYPKVLSYARIRLSGGRHPTPEDVAQEICLAVATSISKFVDQGKPFMAFVYGIASNKVADAHRAYSRDVANPTEDVPETEVELETPESFALVAAGSNRVKELLDLLGDKPREIITLRVFVGLSAEETAEIVGSTPGAVRVAQHRALATLRKALEQEN
433801..434682                     hypothetical protein; CpCIP5297_0435                                                 N/A                 CorynebacteriumpseudotuberculosisCIP5297MTERRWARDGVEAAQSVEQLQADDQFLTHLSQGVDPTDGQDPLARLFLDARAEIQTNVPQAPTLAMLGLGSAEEFPTGELAPVTNESVDSSQLTDAPAAKVIELPRRRWNNAFAHALVGAAAATLIIAGGGTAIYNAGEGSALYALNQKFFGQTTNTEAVVALASKLDQANDLNAKGDKEGARQLLEQARELVNMLNARDRAQAEERIKEAERGSNVAPVPPPAEPEASSETVVTTMTTTVTETVTVEPTPARSTSTAPSTDRSATSSTSPVASTPSPTPAFELPQPEHSQAH
435248..436768                     PHAGE_Bacill_G_NC_023719: gp120; CpCIP5297_0437; phage(gi593777579)                  8.74e-34            CorynebacteriumpseudotuberculosisCIP5297MTQQRVSTGGDNPDKVALVGLTFDDVLLLPDASDVIPSEVSTSTQLTRNISLNIPIISAAMDTVTESRMAIAMAREGGMGVLHRNLSIEEQAQHVETVKRSESGMVTDPVTCSPDMSIAEVDALCARFRISGLPVVDDNGTLLGICTNRDMRFEQDFSIKVSEIMTRMPLVVAEEGVTKQQALNLLSANKVEKLPIVDKQGKLVGLITVKDFVKTEQYPHASKDSTGRLLVGAGIGVGEESWTRAGALVDAGVDVLVVDSAHAHSSGVLDMVSRVKKEWGDRVDVIGGNLATRSAAKAMIEAGADAIKVGIGPGSICTTRVVAGVGAPQITAIMEASVPAHAAGVPIIADGGMQFSGDLAKALAAGASSVMLGSMLAGTAEAPGEIVVVGGKQYKRYRGMGSMGAMQGRGLSGEKRSYSKDRYFQADVKSEDKLVPEGIEGRVPFRGSIEAITHQLVGGLRASMGYTGSATINDLWNARFVQITSAGLRESHPHHIQQTVEAPNYH

#### region 2 ####
complement(1802520..1804241)       PHAGE_Flavob_6H_NC_021867: cytochrome c oxidase subunit I; CpCIP5297_1686; phage(gi526120183)     9.52e-13            CorynebacteriumpseudotuberculosisCIP5297MTAVAPRLEDYSEPTRPAPTGGARKGTLAWKMLTTTDHKQLGIMYIIMSFVFFFLGGLMALLIRAELFSPGLQYLSNEQFNQLFTMHGTVMLLLFGTPIVWGFANYILPLQIGAPDVAFPRLNAFGFWVTMIGAAAMLSGFLTPGGAADFGWTMYLPLADSIHSPGIGSDMWIVGVGATGVGTISSAINMITTILCMRAPGMTMFRMPIFCWNIFVASVLVLMIFPLLTAAALGVLYDRKLGGHLFDPGNGGAIMWQHLFWFFGHPEVYVLALPFFGIVSEIVPVFARKPMFGYIGLVFATLSIGSLSMAVWAHHMFVTGAILLPFFSFMTFLISVPTGVKFFNWLGTMWKGHVSWETPMTWTMGFLVTFLFGGLTGIMLASPPLDFHISDTYFVVAHFHYTLFGTVVFASFAGVYFWFPKMTGRMLDERLGKIHFWITFVGFHGTFLVQHWLGNEGMPRRYADYLDSDGFTTLNQISTIFSFLLGMSVLPFIWNVIKSWRYGEVVTVDDPWGYGNSLEWATSCPPPRHNFTSLPRIRSERPAFELHYPHMVERMRREAHVGHHVEPVTVKTK
complement(1804415..1804594)       hypothetical protein; CpCIP5297_1687                                                 N/A                 CorynebacteriumpseudotuberculosisCIP5297MLWGGKGELTLYSSFGLITAGGEVGELVGVMYKYVPTLLCGAYHWNYLENAVFLAELIV
complement(1804710..1805696)       PHAGE_Mycoba_Bongo_NC_041970: baseplate wedge subunit; CpCIP5297_1688; phage(gi100108)     0.0                 CorynebacteriumpseudotuberculosisCIP5297MESYDSYLESHKKPVSAINWNSIPDEKDLEVWDRLTGNFWLPEKVPVSNDLKSWGTLNDLEKTTTMRVFTGLTMLDTIQGTVGAVSMIPDAITPHEEAVYTNIAFMESVHAKSYSNIFMTLASTKEINEAFRWSEENENLQKKAKIVLSYYEGADPLKRKVASTLLESFLFYSGFYLPMYWSSHAKLTNTADIIRLIIRDEAVHGYYIGYKYQQAVREQTPERQEELKEYTFDLLYDLYDNEIQYTEDLYDDLGWTEDVKRFLRYNANKALNNLGYEGLFPADECKVSPAILSALSPNADENHDFFSGSGSSYVIGKAENTTDDDWDF
1805914..1806099                   hypothetical protein; CpCIP5297_1689                                                 N/A                 CorynebacteriumpseudotuberculosisCIP5297MPHRMAYPKLILGNRLSWPLKKCGLYHLLAFHFTFSSISPLDKISIIKLGNPTRKIPVMLG
1806142..1806627                   Ferritin-like protein; CpCIP5297_1690                                                N/A                 CorynebacteriumpseudotuberculosisCIP5297MSINEKLAAALNNQITAELEASMVYLQLSYILDDLSLTGMRNWMQAQHKEELDHAAQFSKHLLDRDYRPQIGDIAPPKLDANSAVEAFEASLAHEQKVTAMIRELAEIADSVKDYDSRPLIDRFLEEQIEEEANVKEILDRLRIADTGSGILRIDAELAER
complement(1806700..1808859)       PHAGE_Entero_phiEF24C_NC_009904: putative ribonucleotide reductase; CpCIP5297_1691; phage(gi158079505)     0.0                 CorynebacteriumpseudotuberculosisCIP5297MSQSLGKHVAEPVSRTEQLDYHALNALLNLYNADGKIQFDKDREAANQFFLQHVNQNTVFFHDLEEKIEYLVENNYYEPGIIEKYEFAFIKDLFKQAYAHKFRFKSFLGAYKYYTSYTLKTFDGRRYLERFEDRVCMVALTLADGDQNLARNLVDEIMTGRFQPATPTFLNSGKAQRGEPVSCFLLRIEDNMESIGRSINSALQLSKRGGGVALLLSNLREAGAPIKKIENQSSGVIPVMKLLEDSFSYANQLGARQGAGAVYLNAHHPDILNFLDTKRENADEKIRIKTLSLGVVIPDITFELAKRNDDMYLFSPYDVERVYGKAFADISVSEHYAEMVEDPRIRKSKINAREFFQTIAEIQFESGYPYIMFEDTVNKANPIEGRVNMSNLCSEILQVNTPSLFNDDLTYEEVGEDISCNLGSLNIAMTMDSPDFAKTIETAIRGLTAVSEQTAINSVPSIRKGNDAAHAIGLGQMNLHGYLGREHIYYGSEEGLDFTNAYFAAVLYQCLVASNKLARERGRTFVGFETSKYATGEYFDGFDPADFAPKTEKVAKIFADSSIYTPTAADWADLKDSVAAHGLYNRYLQAVPPTGSISYINHSTSSIHPIASKIEIRKEGKIGRVYYPAPHMDNENLDYFADAYEIGFEKVIDTYAVATKYVDQGLSLTLFFKDSATTRDINRAQIYAWRKGIKTLYYIRLRQVALMGTEVEGCVSCML
complement(1809010..1809447)       PHAGE_Bacill_Mgbh1_NC_041879: ribonucleotide reductase A subunit; CpCIP5297_1692; phage(gi100062)     2.66e-18            CorynebacteriumpseudotuberculosisCIP5297MLVVYFSSATENTKRFVQKLGFPAKRIPLHKSSPGLVVDEPYVLVCPTYGGGASISGGNTRPVPAQVIRFLNNEHNRSLLRAVIAGGNSNFGLDFGKAGDTIAAKCKVPYVYRFELLGTDEDVRLVRDGLLGNAAVLGLLPEPVA
complement(1809573..1809806)       PHAGE_Mycoba_Adler_NC_023591: glutaredoxin-like protein NrdH; CpCIP5297_1693; phage(gi589892251)     4.98e-25            CorynebacteriumpseudotuberculosisCIP5297MSITVYTKPACVQCNATKKALDRAGLDYTLVDISIDDEARDYVMALGYLQAPVVEVNGEHWSGFRPERISSLVAQVA
complement(1810290..1810412)       50S ribosomal protein L36; CpCIP5297_1694                                            N/A                 CorynebacteriumpseudotuberculosisCIP5297MKVRKSLRSLKNKPGAQVVRRRGKVYVINKKDPRFKARQG
1810647..1811477                   PHAGE_Bacill_G_NC_023719: gp283; CpCIP5297_1695; phage(gi593777739)                  9.22e-103           CorynebacteriumpseudotuberculosisCIP5297MDTLRDTIKNRLRTRSAIDPAEEITARVDFLAQYLSASGARGFALGISGGQDSTLAGRLAQLAVEKLRKEGYPAEFWAIRLPYGVQADEEDARTALAFIQPDHSVTINIKPATDACAADVAQALGLETLNDFNKGNVKARQRMIAQYALAGEKGLLVIGTDHAAENVTGFFTKFGDGAADILPLAGLSKRQGAQLLQALNAPDSTWLKVPTADLEEERPALPDEVALGVTYSDIDTYIEGSGEVSEKAATRIEHLWKIGEHKRHLPVEPGDTWWRR

#### region 3 ####
2311405..2312352                   PHAGE_Bacill_G_NC_023719: gp344; CpCIP5297_2129; phage(gi593777800)                  9.08e-66            CorynebacteriumpseudotuberculosisCIP5297MSEAPNATTVHDVAIIGSGPAGYTAALYAARAELKPIVFEGIEFGGSLMTTTEVENFPGFPEGIMGPDLMDNMRSQAERFGADLRMELVTKVELEGEIKKIWVDDQEFHARSVILATGSAPRYIGAEGEQTLLGRGVSACATCDGFFFRDHDIAVIGGGDSAMEEATFLTKFAKSVTIVHRREEFRASAIMLERAKNNDKIKFLTNKTVSKVLGENTVSGLELTDTATGETSILDVTAMFVAIGHDPRSDLFRGVVDTNDAGYVRVEEPSTRTNVPGVFAVGDLVDAHYQQAITAAGSGCRGAIDAENYLAALDA
2312414..2312737                   PHAGE_Bacill_SP_15_NC_031245: hypothetical protein; CpCIP5297_2130; phage(gi100156)     1.74e-16            CorynebacteriumpseudotuberculosisCIP5297MNAPIALTEATFKTTVIDSDKPVLVDFWAEWCGPCKKLGPIIDEIAAEMGDEVVVGKVDVDAERNLGAMFQIMSIPTVLIFKDGQKVAEFVGVRPKSEIVAKLRSHQ
2312826..2314007                   PHAGE_Bacill_AR9_NC_031039: hypothetical protein; CpCIP5297_2131; phage(gi100271)     8.91e-09            CorynebacteriumpseudotuberculosisCIP5297MSDILRVGDHSPRVAEVRTALTRLGLVPDSDKEIKQSKGQTFTDPETYFDEDLAEVIKGMQQARGIIASGEINEVTLRALREASYKLGARVLSFEPNNIFVGDDVVQLQTQLQELGFYTDRVDGRFGENTYKALLSYQVNYGLKSDGVCGPETIRAFGRLGRRITGGSPQALRERERVRDAGPMLAGKRVVIDPSLGGNSRGQVVQGPYGEITEEEILWDLATRVEGRMIAAGMETIISRPRQDNPSHLERADIANAFDADVMICLQCDQYQNDKANGVATFYFGSEAGTSSLTGEMLSGFIQREISARTDLVNCGNHGRTWDLLRITAMPTIEVVLGYLTNPHDVTILTDPKHRDAIAEAIVVAVKRLYLLDDDDQPTGTYKFAEMLEQGML
complement(2314059..2314658)       hypothetical protein; CpCIP5297_2132                                                 N/A                 CorynebacteriumpseudotuberculosisCIP5297MFWELEESAALRASAAGTPTLEKEAWLAAMLSAYGTCGFNITSADNFASGNPRAYATLLYCPASEAPGCARLPTAPLTSDAYVLTSLHCDPNMVGSGLETMLLDAAIVHLARQGIKALEAFARDESFCDDPFHPQPENIQRIVNSAEEIGLMTVELLESAGFEIIRHHPVLPLLRLHLPPEHALLTVEAIEPLLANVTA
complement(2314768..2315820)       PHAGE_Agroba_7_7_1_NC_019519: hypothetical protein; CpCIP5297_2133; phage(gi435844368)     3.84e-13            CorynebacteriumpseudotuberculosisCIP5297MAQETRKGGLGRGIGALITGSPAPGQRIGASAADVVFGGAAEKKRQSHSPRDAKGARISPIIAQAVEKQSAGSRGADQQLEEFGATYREIPIGLIIPNEKNPRSVFDEEDLAELVHSIREFGLLQPIVVREAADDRYEIIMGERRWRASSKAGLKTIPAIVRKTDDSEMLRDALLENIHRVQLNPLEEAAAYQQLLQEFGVTQNELADKLGRSRPVITNMIRLLALPVAVQRKVAAGVLSAGHARALLGVKGGEAPQVALADRIVAEGLSVRATEEAVTLMNRGEKPAPKKREKAPTPEFLTNAANRLADGLDTKVSVSMGKRKGKIVVEFGGREDFDRIMGLLGGNSEG
complement(2315826..2316818)       PHAGE_Natria_PhiCh1_NC_004084: putative plasmid partitioning protein Soj; CpCIP5297_2134; phage(gi22091150)     4.58e-27            CorynebacteriumpseudotuberculosisCIP5297MDDQNWEDTPIAAAARRAAQVLTPNSLHLPRPDSSRRLTVANQKGGVGKTTSSVNLAAGLAINGLKVLVIDLDPQGNASTALGVDHRAGTLSSYELLIGECAVEDALQETTASENLFCIPATIDLAGAEIELVNLVRREYRLSDALNTEYMQQAGFDYIFIDCPPSLGLLTINAMTAVDEVLIPIQCEYYALEGVGQLLNNITMIRQYLNPNLHISSILLTMYDGRTKLAEQVMDEVRGHFGDVVLGTKIPRSVKVSEAPGYGQTVLAYDPGSRGALAYLDAARELATRGDYVPSESSGPIGMSPEALREQQEQNQSDGEADHADETSKE
complement(2316923..2317594)       Glucose-inhibited division protein B; CpCIP5297_2135                                 N/A                 CorynebacteriumpseudotuberculosisCIP5297MKHEENNGTEHGLELTPPPEIAAEIFGSLLDKAVEYHRLLATDGSTRGFIGPREIPKLWDRHILNCAVIGEAMDSNARVADIGSGAGLPGIPLALARPDLEITLIEPLLKRSVFLGEVKDSLGLDNVTIMRGRAEEKVIRNELGLVDVVTSRAVAPLGKLAGWSLPLVRLGGKMIAMKGSSVKEELARDEKMIFKAGGGKIKIFTVGDQLEDPTTLISIRKVR
complement(2317779..2318735)       Inner membrane protein translocase component YidC; CpCIP5297_2136                    N/A                 CorynebacteriumpseudotuberculosisCIP5297MLNFIYWPISAILWFWHKVVSFVFDPGSGISWVLAIMLLTFTIRAFLVKPMLNQMHSARKMQELQPLMQEIRKKYGKDQQKMMAETRKVQKEVGVNPIAGCLPALVQMPVFIGLFHVLRSFNRTGTGHSQLGLSVEVNRETPNYIFSAEDVQSFLDARIFGVPLSSYISMPADMYKAFQPVDFTRVNIIAVAAPLILIIVVATHMNGRLSVNRQKARRESGLQAAPTSGQMQMQMDLMNKMMLWFMPLTILFTGVLWHLGLLFYMVANNIWTFFQQRWIFNKIDAEEAEEIEAKKAAKRATAPKPGQRPQNPKKGKKK
complement(2318791..2319078)       PHAGE_Haemop_HP1_NC_001697: hypothetical protein; CpCIP5297_2137; phage(gi9628603)     1.12e-07            CorynebacteriumpseudotuberculosisCIP5297MCYSHDQMSNENNNSRLVRPAGIISGLLYDAVRFYQKYISPLKMGSTCRFDPTCSAYALEAVSRRGAVIGTALTIARLAKCGPWHPGGYDPVPRR
