gi|386612081|ref|NC_017640.1|  Escherichia coli UMNK88 plasmid pUMNK88_Ent, complete sequence. 81475, gc%: 50.37%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
1157..1168                         attL                                                                                 N/A                 TGCTCCCTTCAT
complement(1265..2005)             PHAGE_Brevib_Jenst_NC_028805: putative recombinase XerD; UMNK88_pEnt17; phage(gi971744895)     3.96e-05            EscherichiacoliUMNK88MNNVIPLQNSPERVSLLPIAPGVDFATALSLRRMATSTGATPAYLLAPEVSALLFYMPDQRHHMLFATLWNTGMRIGEARMLTPESFDLDGVRPFVRILSEKVRARRGRPPKDEVRLVPLTDISYVRQMESWMITTRPRRREPLWAVTDETMRNWLKQAVRRAEADGVHFSIPVTPHTFRHSYIMHMLYHRQPRKVIQALAGHRDPRSMEVYTRVFALDMAATLAVPFTGDGRDAAEILRTLPPLR
4702..5196                         putative transcriptional regulator; UMNK88_pEnt18                                    N/A                 EscherichiacoliUMNK88MDSMKLLNKTIIYQQQNEQSYPSQEHLLLQLCMRVNKKLSDNINAYLKNYDINDTTLMILTLLSSVDGFCLSPTELSERLDVSKTNITRACDSLEKIGFIKRMASKEDRRSKNIYLTPEGDLYLHQTTRIYGIYLKEIWSCLADDEINLLKVISRKVLSYDIPL
complement(5747..6370)             PROPHAGE_Escher_MG1655: IS3 transposase B; UMNK88_pEnt19; phage(gi16128284)          1.03e-122           EscherichiacoliUMNK88MKYVFIEKHQAEFSIKAMCRVLRVARSGWYTWCQRRTRISKRQQFRQHCDSVVREAFTRSKQRYGAPRLTDELCAQGYQFNVKIVAASLRRQGLRAKASRKFSPVSYRAHNLPVSENLLEQDFYASGPNQKWAGDITYLRTDEGWLYMAVVIDLWSSAVIGLSMLPRMTAQLACDALQMALWRRNYRSLGPRKPVLFSRLSGAAEAA
complement(6367..6675)             PROPHAGE_Escher_MG1655: IS3 transposase A; UMNK88_pEnt20; phage(gi226524700)         4.00e-58            EscherichiacoliUMNK88MTHMTKSVSTRKKARKQHSPEFRSEALKFAERIGVAAAARELSLYESQLYNWRSKQQHQQTSSERELEMAIEIARLKRQLAERDEELAILQKAATYFAHRLK
6811..7554                         PHAGE_Shigel_Sf6_NC_005344: putative transposase OrfB; UMNK88_pEnt21; phage(gi41057343)     1.67e-12            EscherichiacoliUMNK88MTFSPDSRLTMKALEMAWETRGKPGRVMFHSDRKNAGISFYHHSVWECGRFPRLSGDETCLLKKKKSAPLSFISNMVRSWLPSYVNWATLRKEICGVGSAHGKQVVAQKNPFVTSTVTPMSKNRLLLNIILTTTAAWRLPAEPWVIPALMCSLAGLMNVIPTDDVYLPVRPTRLRPLNQKSNIRLSWHSVHDKYQPVKSPGVLVSVVRYYINGKMKLSATVFTRLCVNITNLPWRQNAMRCGKKSPD
complement(7556..8029)             PROPHAGE_Escher_CFT073: insertion element IS2 transposase InsD; UMNK88_pEnt22; phage(gi26249446)     4.76e-83            EscherichiacoliUMNK88MLGAVVRPFGSELPISPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTIKRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRASNGLSDNRCLESKLCFFSVVQVTDTDARVFFRISSSICRRRIS
complement(7966..8490)             PROPHAGE_Escher_CFT073: transposase insC; UMNK88_pEnt23; phage(gi26249447)           7.71e-64            EscherichiacoliUMNK88MIVLILVFRLVIGEQMSDVLGPEKRRRRTTQEKIAIVQQSFEPGMTGSLVTRQHGAAASQLFLWRKQYQKGSLTAVAAGEQVVPASELAAAMKQIKELQRLLGKKNDGALTGSSSAVITEKNCESRSRWTAVTVRHCTGRLLRAASTVKQYRTSCWERWYAPSAASFRYRQWNG
9038..10534                        hypothetical protein; UMNK88_pEnt24                                                  N/A                 EscherichiacoliUMNK88MVFGSLIFLFIILLTFFWKKAELVNDSQIRVNFALGYIENLLDQNNSISSEAEHLLLNNCNADTQRKLSNLLLKRPQLRALSLTRQEAVFCSTHPGLPVGPIAEKERWQHDMLIRFPEDAGTLPWILLKVPYSNGTIITVTDYYFIQDIISVISAVPAIKFRSGSTVLSVSGKNVSLHPDDSGIQKEIHSKKYPFSLIYIIPVKMQLIYAWKHAWYMLPVAIFVGILTAFQLSRRRPSSLNDMLKNALTYGEFRPYFQPVISAKNHQLSGCEVLIRWHHPINGIIPPDQFIPLAESTGLIVPITQQLMSLVEHSLNSVAHFLPDHFHIGINISPAHFLSLGLENDCRKFLSAFPKGKVKLVLELTERNQLSVTTESKALFAKLHQQGVQFALDDFGTGYATHSYLQSFPVDYIKLDKGFVQMVGVDEISEHIVENVIALAGRLGIDIIAEGIETELQESVMIEKGISYLQGYRYAPPLPAEQFITEWIYGNKNSKSQR
complement(10955..12568)           PHAGE_Stx2_c_1717_NC_011357: transposase; UMNK88_pEnt25; phage(gi209447153)          0.0                 EscherichiacoliUMNK88MSQKYLIRIAELERLLSEQAEALRQKDQQLSLVEETEAFLRSALTRAEEKIEEDEREIEHLRAQIEKLRRMLFGTRSEKLRREVELAEALLKQREQDSDRYSGREDDPQVPRQLRQSRHRRPLPAHLPREIHRLEPEESCCPECGGKLDYLGEVSAEQLELVSSALKVIRTERVKKACTKCDCIVEAPAPSRPIERGIAGPGLLARVLTGKYCEHLPLYRQSEIFARQGVELSRALLSNWVDACCQLMTPVNDALYRYVMNTRKIHTDDTPVKVLAPGQKKAKTGRIWTYVRDDRNVGSSSPPAVWFAYSPNRQGKHPEQHLRPFRGILQADAFTGYDRLFSAEREGGALTEVACWAHARRKIHDVYISSKSATAEEALKRISELYAIEDEIRGLPESERLAVRQQRSKVLLTSLHEWMVEKNGTLSKKSRLGEAFSYVLNQWDALCYYSDDGLAEADNNAAERALRAVCLGKKNFMFFGSDHGGERGALLYGLIGTCRLNGIDPEAYLRHILSVLPEWPSNRVDELLPWNVVLTNK
complement(12599..12949)           PHAGE_Stx2_c_1717_NC_011357: transposase; UMNK88_pEnt26; phage(gi209447152)          5.39e-51            EscherichiacoliUMNK88MISLPSGTRIWLVAGVTDMRKSFNGLGEQVQHVLNDNPFSGHLFIFRGRRGDTVKILWADADGLCLFTKRLEEGQFIWPAVRDGKVSITRSQLAMLLDKLDWRQPKTSSRNSLTML
complement(12946..13371)           PHAGE_Stx2_c_1717_NC_011357: truncated transposase; UMNK88_pEnt27; phage(gi209447151)     1.29e-15            EscherichiacoliUMNK88MELQDWRKEPRKNYSNEFKLRMVELASQPGACVAQIARENGVNDNVIFKWLRLWQNEGRVSRRLPVTTSSDTGVELLPVEITPDEQKEPVAAIAPSLSTSTQTRVSASSCKVEFRHGNMTLENPSPELLTVLIRELTGRGR
13664..14032                       hypothetical protein; UMNK88_pEnt28                                                  N/A                 EscherichiacoliUMNK88MHKIDRPALVQRFWRSQWRGITHRKPLFAFTAKIQLQQTINTMDPFVIPRVSLPSQNLEKLRKAVSWVSLSRSLQGGNNGFITRGIRAVMVNRSAQVQTPAGLTDTESECRYQMSAQLTLKS
complement(14022..14300)           PROPHAGE_Salmon_LT2: transposase; UMNK88_pEnt29; phage(gi16766077)                   4.53e-55            EscherichiacoliUMNK88MRKARFTEHQIIAVIKSVEAGRTVKDVCREACISEATYYNWKSRYGGMEASDIKKIKDLEDENRRLKQMFADLSLENRALKDVIEKSFKISF
complement(14688..14903)           heat stable enterotoxin II Stb; UMNK88_pEnt30                                        N/A                 EscherichiacoliUMNK88MKKNIAFLLASMFVFSIATNAYASTQSNKKDLCEHYRQIAKESCKKGFLGVRDGTAGACFGAQIMVAAKGC
complement(15338..15628)           PROPHAGE_Escher_CFT073: transposase; UMNK88_pEnt31; phage(gi26246249)                3.52e-40            EscherichiacoliUMNK88MPTELKNRGLNDILIGCVNGLKGFPDAINTVYPEARIQLCIVHMVRNSLRFVSWKDYKAVTRDLKAIYQAPTEEAGQQALEAFQQKEYHILLYFEA
16195..16446                       PROPHAGE_Escher_CFT073: insertion element IS2 transposase InsD; UMNK88_pEnt32; phage(gi26249446)     2.81e-33            EscherichiacoliUMNK88MLDCGDREALHWAVSSGGFGSETVQDIMLGMVEHCFGNGLPISLVEWLTYNGSCYRANETCQFVRMLGVEPKTRRCGVRRVTA
complement(16720..17691)           PROPHAGE_Brucel_1330: ISBm3, transposase, programmed frameshift; UMNK88_pEnt33; phage(gi52430457)     1.39e-15            EscherichiacoliUMNK88MNREIQQRLQWVKLYETSGDAGFVCRRCGISRPTLRKWWRRYLAQGIAGLESHSRRPKHSPSTKTGAGEVALILELRSLRNLGARRIQSELKRLHAISLAVATIHKVLCQNKVKSVVKFRRKADFIRYERPVPGDRVQMDTCKIGPGLYQYTSVDDCTRYRVLRLYSRRTAANTLDFIDCVIEEMPFPIQRLQTDRGREFFAVKMQEKLKEYSIKFRPNKPASPHLNGKVERSQKTDKAEFYATVDLSTDDLKELLAEWQHYYNWERHHSAHNGKTPMARYFELAEQTPHSDAVHTSYQPNEEHIQEQNYKLELELRKLKRCL
complement(17903..18616)           hypothetical protein; UMNK88_pEnt34                                                  N/A                 EscherichiacoliUMNK88MSDSALLRNSSLFIAYMGCLGWGSAYFYGWGTSFYYGFPWWVVGAGVDDVARSLFYAVTVIVVFLIGWGTGIVFFLGVKQKNNMQSLSFFRLFLAILLLFVSPALEFSVIHQHFAPYTLTLCVIAALIITLLVRMGVGFISVKCISEVSFIRQYRIECVLLGFIIYFWLFSFIAGWYKPQFKKEYQTLRYENAWYYVLARYDERLILSKSYLNGSKKFVVLNSANTDGFEINIVRVL
19429..20259                       PHAGE_Vibrio_CTX_NC_015209: CtxA; UMNK88_pEnt35; phage(gi332672306)                  4.29e-156           EscherichiacoliUMNK88MALSFSGLSSCMIYKFSSMKNITFIFFILLASPLYANGDRLYRADSRPPDEIKRSGGLMPRGHNEYFDRGTQMNINLYDHARGTQTGFVRYDDGYVSTSLSLRSAHLAGQSILSGYSTYYIYVIATAPNMFNVNDVLGVYSPHPYEQEVSALGGIPYSQIYGWYRVNFGVIDERLHRNREYRDRYYRNLNIAPAEDGYRLAGFPPDHQAWREEPWIHHAPQGCGNSSRTITGDTCNEETQNLSTIYLREYQSKVKRQIFSDYQSEVDIYNRIRDEL
20256..20630                       PHAGE_Vibrio_CTX_NC_015209: CtxB; UMNK88_pEnt36; phage(gi332672307)                  2.89e-70            EscherichiacoliUMNK88MNKVKCYVLFTALLSSLYAHGAPQTITELCSEYRNTQIYTINDKILSYTESMAGKREMVIITFKSGETFQVEVPGSQHIDSQKKAIERMKDTLRITYLTETKIDKLCVWNNKTPNSIAAISMKN
complement(20908..21441)           hypothetical protein; UMNK88_pEnt37                                                  N/A                 EscherichiacoliUMNK88MAKFSVPLQSGQVSRYTAYSALFDQPRTGLPLSCCFDRMISRRSLHRALLNCSSPDRLGVGPVFFVTVSDISDNCRQQASEPAVPVIARFYSTGRSVTAGMPVRPAHWLSRGGVDYVVAVQLFPHLFSPLLRPDNAALPVLPGNFRPAFFLNRATPTGGRIILTDCPWGIEQPLRFT
21452..21790                       PROPHAGE_Shewan_MR-1: ISSod1, transposase OrfA; UMNK88_pEnt38; phage(gi24373865)     7.36e-10            EscherichiacoliUMNK88MICSPQNNTGAPMKKRNFSAEFKRESAQLVVDQNYTVADAAKAMDVGLSTMTRWVKQLRDERQGKIPKASPITPEQIEIRELRKKLQRIEMENEILKKATALLMSDSLNSSR
21817..22656                       PHAGE_Shigel_Sf6_NC_005344: putative transposase OrfB; UMNK88_pEnt39; phage(gi41057343)     0.0                 EscherichiacoliUMNK88MVTLCHVFGVHRSSYRYWKNRPEKPDGRRTVLRSQVLELYGISHGSAGARSIATMATRRGYQMGRWLAGRLMKELGLVSCQQPTHRYKRGGHEHVAIPDYLERQFAVTGPNQVWCGDVTYIWTGKRWAYLAVVLYLFARKPVGWAMSFSPDSRLTMKALEMTWETRGKPGGVMFHSDQGSHYTSRQFRQLLWRYQIRQSMSRRGNCWDNSPMERFFRSLKNEWMPVVGYVSFSEAAHAITDYIVGYYSALRPHEYNGGLPPNESENRYWKNSNSVASFC
complement(23074..23505)           hypothetical protein; UMNK88_pEnt40                                                  N/A                 EscherichiacoliUMNK88MAHRYLREKCFALNLNWKCKLFLTPPKSFWGTTHAYNFCPIHFLQALPSLPLSRNVEVAYGMPLIFVDVNGPSDVEVVRSFDVSTYLPLMPFSARAFDFMITKSAHFSAATYCGSFSTFPAHAVIVKTVAAANNLPSFIFIPY
complement(24263..24874)           PHAGE_Sinorh_phiM9_NC_028676: putative ProQ/FINO family protein; UMNK88_pEnt41; phage(gi966199408)     3.20e-06            EscherichiacoliUMNK88MWYLWPQEDDSSEAEHSMTEQKRPVLTLKRKTEGEAPVRSRKTIINVTTPPKWKVKKQKLAEKAAREAELAAKKAQARQALSIYLNLPTLDEAVNTLKSWWPGLFDGDTPRLLACGIRDVLLEDVAQRNIPLSHKKLRRALKAITRSESYLCAMKAGACRYDTEGYVTEHISQEEEAYAAARLDKIRRQNRIKAELQAVLDEK
complement(24878..25261)           IncF transfer acetylation protein TraX; UMNK88_pEnt42                                N/A                 EscherichiacoliUMNK88MAAQVLTWCETRSLWRTAAAILLMALWGPLSGTSYGIAGLLMLAVSHRLYRAEDRTERLALVACLLAVIPALNLATSDAAAVAGLVMTVLTVGLVSCAGKSLPRFWPGDFFPTFYACHLAVLGVLAL
complement(25641..30911)           PHAGE_Mycoba_Adler_NC_023591: hypothetical protein; UMNK88_pEnt43; phage(gi589892239)     3.89e-06            EscherichiacoliUMNK88MMSIAQVRSAGSAGNYYSDKDNYYVLGSMGERWAGQGAEQLGLQGSVDKDVFTRLLEGRLPDGADLSRMQDGRNRHRSGYDLTFSAPKSVSVMAMLGGDKRLIDAHNQAVDFAARQVEALASTRVMTDGQSETVLTGNLVMALFNHDTSRDQEPQLHTHAVVANVTQHNGEWKTLSSDKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVPVEAFSSRSQAIREAVGEDASLKSRDVAALDTRKSKQHVDPEVRMAEWMQTLKETGFDIRAYRDAADQRAETRTQAPGPASPDGPDVQQAMTQAIAGLSERKVQFTYTDMLARTVGILPPENGVIERARAGIDEAISREQLIPLDREKGLFTSGIHVLDELSVRALSRDIMKQNRVTVHPEKSVPRTAGYSDAVSVLAQERPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQMNLKQDERLSGELITGRRQLLEGMAFTPGSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQRTGTGSALMAMKDAGVNTYRWQGGEQRPATIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQAIRRELKTQGVLGHPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSNSLTLRDAQGETQVVRISSLDSSWSLFRQEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPATLPVGDSPFTALKLESGWVETPGHSVSDSATVFASVTQMAMDNATLNGLARSGRDVRLYSSLDETRTAEKLARHPSFTVVSEQIKARAGETLLETAISLQKAGLHTPAQQAIHLALPVVESKNLAFSHVDLLTEAKSFAAEGTSFADLGREINAQIKRGDLLYVDVAKGYGTGLLVSRASYEAEKSILRHILEGKEAVTPLMERVPGELMEKLTSGQRAATRMLLETSDRFTVVQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSAGVDAQTLASFLHDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGAGRAVASGDTDQLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELREAVYSLINRDVERALSGLESVKPSQVPRQEGAWVPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIHDAREKAGELGKEQVMVPVLNTANIRDGELRRLSTWETHRDALVLVDNVYHRIAGISKDDGLITLEDAEGNTRLISPREAVAEGVTLYTPDTIRVGTGDRMRFTMSDRERGYVANSVWTVTAVSGDSVTLSDGLQTRVIRPGQEQAEQHIDLAYAITAHGAQGASETFAIALEGTEGGRKQMAGFESAYVALSRMKQHVQVYTDERQGWTDAINNAVQKGTAHDVLEPKADREVMNAERLFSTARELRDVAAGRAVLRQAGLAGGDSPARFIAPGRKYPQPYVALPAFDRNGKSAGIWLNPLTTDDGNGLRGFSGEGRVKGSWDAQFVALQGSRNGESLLADNMQDGVRIARDNPDSGVVVRIAGEGRPWNPGAITGGRVWGDIPDNSVQPGAGNGEPVTAEVLAQRQAEEAIRRETERRADEIVRKMAENKPDLPDGKTEQAVREIAGQERDRAAITEREAALPESVLREPQREREAVREVARENLLQERLQQMERDMVRDLQKEKTLGGD
34812..34823                       attR                                                                                 N/A                 TGCTCCCTTCAT
