gi|409187975|ref|NC_018887.1|  Borrelia afzelii HLJ01 chromosome, complete genome. 905471, gc%: 28.32%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
complement(390508..391563)         PHAGE_Lactob_Ldl1_NC_026609: ATP binding cassette transporter; BafHLJ01_0414; phage(gi764162117)     3.17e-17            BorreliaafzeliiHLJ01MNGGNGEAFYMRIAIFIFGILLTSCFSKNGIESGSSKIKISMLVDGVLDDKSFNSSANEALLRLKKDFPENIEKVFSSAVSGVYSSYVSDLDNLKMNGSGLIWLVGYMLADVSLSVSLENPEINYGIIDPIYGDDVQIPKNLIGVVFRIEQGAFLAGYIAAKKSVSSKIGFIGGVKGDIVDAFRYGYEAGAKYANKGIEIVSEYSNSFSDIDIARVMANKMYSKGIDIIHFAAGLAGVGVIEAAKELGDGYYVIGADQDQSHLAPKNFITSVIKNVGDALYLITSESLKNDNVWKGGKIVQMGLRDGVVGLSNANEFEYIKDLERKIINKEIIVPCNQEGYEIFIKQILKL
complement(391619..392638)         PHAGE_Lactob_Ldl1_NC_026609: ATP binding cassette transporter; BafHLJ01_0415; phage(gi764162117)     5.79e-32            BorreliaafzeliiHLJ01MNKLLLLILFEGVIFLSCSGKSGLESGIPKVSLVIDGTFDDKSFNESALNGVKKLKEEFEIELVLKESSTNSYLSDLEGLKDAGSNLIWLIGYKFSDVAKAVSLQNSEMKYAIIDPVYSNEPIPSNLVGMTFRAQEGAFLTGYIAAKVSKTGKIGFLGGIEGDIVDAFRYGYEAGAKYANKDIKIFSQYIGSFSDLEAGRSVATKMYSDGIDIIHHAAGLGGIGAIEVAKELGSGHYIIGVDEDQSYLAPNNVITSSTKDVGRSLYLFTSNYLKTNTFDGGKLINYGLKEGVVGFVRNPKMIPFEVEKEIDSLSSKIINKEVIVPYNKESYEKFLKEFI
complement(392682..392921)         hypothetical protein; BafHLJ01_0416                                                  N/A                 BorreliaafzeliiHLJ01MFTYVSLSVSLDYIKNGVFKRRVVINQRLKEEVIEVVKDPDVLNNKLVDEVINLENKIINREIIVPDSEYAFDLFKSKL
complement(393301..394320)         PHAGE_Lactob_Ldl1_NC_026609: ATP binding cassette transporter; BafHLJ01_0417; phage(gi764162117)     7.12e-31            BorreliaafzeliiHLJ01MSKLLLLILFEGIIFLSCSGKDGIENRIPKVSLIVDGTFDDKSFNESALNGVKKIKEEFEIELVLKESSTNSYLSDLEGLKDAGSNLIWLIGYRFSDVAKAVSLQNSEMKYAIIDPVYSNEPIPANLVGMTFRAQEGAFLTGYIAAKVSKTGKIGFLGGIEGDIVGAFRYGYEAGAKYANKDIKIFSQYIGSFSDIEAGRSVATKMYSDGIDIIHHAAGLGGIGAIEVAKEFGSGHYIIGVDEDQSYLAPSNVITSTTKDVGRSLYLFTSNYLKTNTFEGGKSINYGLKEGVVGFVRNPNMIPFEVEKEIDSLSSKIINKEVIVPYNKESYEKFLEEFI
complement(394364..395431)         PHAGE_Lactob_Ldl1_NC_026609: ATP binding cassette transporter; BafHLJ01_0418; phage(gi764162117)     4.39e-18            BorreliaafzeliiHLJ01MILFKRFIFIALFLLVLACFQSNGKSAKSDKVVIGVLANGSFYDKGYNQSVYDGVVKLRDDFGVKLITKSLRPYPIEGKRLLTVNEAMTEDAYEVQKNPLNLFWLIGYQFSSLSVRLSYERPDICYGIIDAFDYGDIQVPKNSLAIKFRNEEAAFLAGYIAAKMSRKEKIGFLTGPTSEYLNDFKFGFKAGIFYANPKLRLVSKKAPSLFDKEKGKEMARFMYKEDKVGVILPIAGITSLGVYDAAKELGPKYYVIGLNQDQSYIAPQNVITSILKDIGKVIYSVSSDYIKNGVFKGGVVIDRGLKEGVIEVVKDPDVLNNRLVDEVINLENKIINGEIIVPDSEYAFDLFKSKL
complement(395739..396764)         PHAGE_Lactob_Ldl1_NC_026609: ATP binding cassette transporter; BafHLJ01_0419; phage(gi764162117)     1.19e-28            BorreliaafzeliiHLJ01MLKKVYYFLFFLFIIACSGSDDNKSESKTVSLIVDGTFDDKGFNESSSNAIRKLKTDFNINIIEKASTGNSYLGDISNLEDGNSNLIWGVGFRLSDMLLQRAGENVSINYAIIEGVYNEIQIPKNLLNISFRSEEVAFLAGYFAAKASKTGKIGFIGGVKGEVLESFMYGYEAGAKYANSNIKVVSQYVGTFGDFGLGRSTASNMYRDGVDIIFAAAGLSGIGVIEAAKELGSDHYIIGVDQDQAYLAPNNVLISAVKKVDSLMYSLTKKYLETGVWDGGKTMLFGLKEDGLGLVLNENLKSNYSEIYDESLKIGQSIINGIIKAPYDKASYDNFVLQIAN
complement(396865..397338)         30S ribosomal protein S7; BafHLJ01_0420                                              N/A                 BorreliaafzeliiHLJ01MSRKNKKIKKKIFVDTRYNSRIVAKFANRMMYDGKKSISESILYSSIDLLADKLEDSDKMAVFCKALDNIKPLVEVRSRRVGGATYQVPVEVREERREALAMKWIIFAARKASGRSMKEKLSNELLNAYNSTGAAFKKKEDTHRMAEANKAFTHYRW
complement(397363..397737)         30S ribosomal protein S12; BafHLJ01_0421                                             N/A                 BorreliaafzeliiHLJ01MPTINQLIRKPRKSQTEKTASPALQNCPQRRGICTRVMTVTPKKPNSALRKVARVRLSNGFEVTAYIPGIGHNLQEHSVVLIRGGRVKDLPGVRYHIVRGAKDTLGVNNRKKGRSKYGTKKPKA
complement(397805..401938)         PHAGE_Yersin_phiR1_37_NC_016163: RNA-polymerase beta-subunit RpoC, N-terminus; BafHLJ01_0422; phage(gi358356757)     1.09e-18            BorreliaafzeliiHLJ01MKEIKDFEKIKIKIASPDQIRNWSYGEVKKSETINYRTLRPEKDGLFCERIFGTTKEWECYCGKFKSVRYKGIICDRCNVEVTHFKVRRERMGHIELAAPVAHIWYYKYIPSRIGLLLDITASSLNSILYYEKYVVIEPGDTDLKKMQLLNEDEYIEARERYGMSFNASMGAEAIKSLLENLDLDELSSKLRIQMIDKDDKTDKKLLRRLEIIENFKISGNKPEWMIMEVLPVIPPEIRPMVQLDGGRFATSDLNDLYRRVINRNNRLRKLLLLNAPEIIVRNEKRMLQESVDSLFDNSHKRKVVKGSSSRPLKSLSDALKGKQGRFRQNLLGKRVDYSGRSVIVVGPELKLHQCGLPAKMALELFKPFVIRRLIESEAVFNIKRAKNLIEQEVDEVWQILDLVIKEHPILLNRAPTLHRLGIQAFEPVLVEGKAIKLHPLVCHAYNADFDGDQMAVHVPLTPSAQAESWALMLSTNNLLNPANGHPIVFPSQDIVLGLYYLTMEKKNTVGEGKKFLNFNNVILAINNRSLDYNASIYVKIDGKYKKTTAGRVIFNEALPNGIEFVNKTLSDLELQILISKVYVVHGSSTVIEMLDIIKELGFKYATKFGCTISMSDIIVPDEKKAYIDRANKEIAKIQNDYAKGVITGEERYNNVVSVWLKTNEELTNKMMEILKKDRDGFNVIYMMADSGARGSRNQIRQLAGMRGLMAKTSGDIIELPIISNFKEGLSVIEFFISTNGARKGLADTALKTADAGYLTRRLVDIAQDVVVRIEDCGTINGIKVETVKNGEEILESLKEKAVGSYSIERIKNPITGEIVLDANEEISEAKIELLEKIGVEKLVIRSVLTCEAEHGVCQKCYGRDFSKNKPVNIGEAVGIIAAQSIGQPGTQLTMRTFHIGGVAQAGSEDDKISLKNTFILNGIEGFNVRVENGILFTRKGTLKIINVFYEEKIKNIKEIKVSDSQRVIKGIPLFVNNKGVEILSSYIGYVKLRDDKFLIVSEEQEVSLKAGTKLEIEVGEYVESGKVIGTFDPFAEPIIAEVKGKIKFKDIILGTTLKEEINTETGNVEKRITDNVFESLDPRIFIIDSGGVEIASYVLPGDAYLQVEDGQNINIGDIIAKLSKGSEKTQDITGGLPRVNDLFETRIPKNLTEMAKVSGIVQFKSIQKGKRLINILDEYGVEHKHYIPAGKHLLVRDGDIVKAGDMLCDGRINPHDVLEILGGISLQEFLLAEIQDVYRKQGVSINDKHIGVIIKQMMKKVKIVAVGDTNFVYGQKVDKHTFYEQNRKVIEQGGEPAIASPILIGVTKTSLNIDSFISAASFQETTKVLTDASIAGKIDDLRGLKENVVIGHLIPTGTGMGLYKKIKVSENVNSEV

#### region 2 ####
451339..451725                     PHAGE_Entero_EF62phi_NC_017732: chromosome partitioning ATPase; BafHLJ01_0471; phage(gi384519759)     1.11e-12            BorreliaafzeliiHLJ01MKIISVINQKGGVGKTTSAINISYSMTLLNKKILLIDIDSQGNSTSGTNTSEHITENSSYELINKKIKVKPLNHFKLDIIPSSIKLALLEKELINELSRENFLKNALTLYEKDKYDFIIIDCPLHFQY
452093..452806                     PHAGE_Strept_9871_NC_031069: hypothetical protein; BafHLJ01_0472; phage(gi100027)     1.20e-11            BorreliaafzeliiHLJ01MSDNLETLMFLMGKKLETSSSNLENIEKKEIISIERKNFDYNKLDKDISDFLKTKQYEIFNIFNNTYTKIGKILKETQDKLKGNNQYNGLFYQWFKSMGFKKDKVYALISRYKLLVENSDKQLTIEKLPLSLSYEISKKSCPSILKTEVLNGKINSLKEFKIVYKKNFDLKDTHKSSLKKDKKYENDIKEALDFILKTIKEFKNIELNKLDQENLKLFFHSISEIKKKIKYIKNNLI
complement(453094..453876)         PHAGE_Gordon_Nyceirae_NC_031004: late promoter transcription; BafHLJ01_0473; phage(gi100046)     7.02e-09            BorreliaafzeliiHLJ01MDGVFKMIDIQLLDIDNDQPRKSVSLVELEELSISIKENGILQPIIVCKVNERYKIIVGERRFRAAKLIQMTNIPVIEVNIKESCRDFMPLVENIQRENFTPVEEAYAYKNVMNKYSLTQKDLSEKIGKSRTYISNIVRILDLEQEILNAVHRKEISFGHAKVILSLKDKQDRYNLYLIILKKKFSVRDAEKYVKNFYKSIAKKKEVEQDPFLSNIKEFLFDKIQTKIDIKGNQDKGKIEIEYFTAGDLRRIVSFFGHIN
complement(453994..455922)         PHAGE_Bacill_PBS1_NC_043027: hypothetical protein; BafHLJ01_0474; phage(gi100235)     2.67e-61            BorreliaafzeliiHLJ01MVNGSSGIAVGMATNMAPHNLREICDAIVYMLDNENASIFDLLKIVKGPDFPTFGEIVYNDNLVKAYKTGKGSVVIRARYHIEERTEDRNAIIVTEIPYTVNKSALLMKVAFLAKEEKLEGLLDIRDESDREGIRIVLEVKRGFDPHVIMNLLYEYTEFKKHFSINNLALVDGIPKQLNLEELLFEFIEHRKNIIERRIEFDLRKAKEKAHVLEGLNIALNNIDEVIKIIKSSKLAKDAKERLVANFGLSEIQANSVLDMKLQKLTALEIFKLEEELNVLLSLIKDYEDILLNPVRIINIIREETINLGLKFGDERRTKIIYDEEVLKTSMSDLMQKENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLNDGDEIAIALCVNSHDYLFMISNEGKLYLINAYEIKDSSRASKGQNISELINLGAQEEILTIKNSKDFTDDSYLLLTTASGKIARFESTDFKTVKSRGVIVIKLNDKDFVTSAEIVFKDEKVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLKEGDLFVKVLAVRENPYLLIISENGYGKRLSVSKISELKRGATGYTSYKKSDKKAGSVVDAIAVSEDDEILLVSKRSKALRTVAGKVSEQGKDARGIQVLFLDNDSLISVSKFIK
complement(455916..456425)         PHAGE_Bacill_G_NC_023719: gp254; BafHLJ01_0475; phage(gi593777710)                   7.35e-43            BorreliaafzeliiHLJ01MAVGENKEQILNVKIEDEIKTSYLNYAMSVIVSRALPDVRDGLKPVHRRILYSMYEMGLRSDKAFKKAGRIVGDVLGKYHPHGDQSIYDALVRLAQDFSLRYPVIRGQGNFGSIDGDPPAAMRYTEAKMARIAEYIVKDIDKETVNFKSNYDDSLSEPEIMLHHFHFFW
complement(456437..458356)         PHAGE_Bacill_PBS1_NC_043027: tail sheath stabilizer and completion protein; BafHLJ01_0476; phage(gi100209)     1.73e-96            BorreliaafzeliiHLJ01MNGRFMNYVASNIQVLKGLEAVRKRPGMYIGSVSVNGLHHLVYEVIDNSIDEALAGFCDRIDVIINLDNTITVIDNGRGIPTDIHEEEGISALELVLTKLHSGGKFNKGTYKVSGGLHGVGISVVNALSSFLEVYINRDGKIFRQTFSKGIPTSKVEVVGESSITGTKVTFLADSEIFETLDYNFDVLEKRLKELAFLNDKICISIEDKRFGKEKSSKFYFEGGIKSFVDYLTNDSKAYQSESYYIDGLMNDVIVNIGLKWTESYSDNILSFVNNINTREGGTHVMGFRSGLTKAMNEAFKNSKISKKDVPNLTGDDFKEGLTAVISVKVPEPQFEGQTKSKLGNSEIKKIVEIIVYEHLLKIINLNPLEIDLILGKAIKAARAREAARKARESERKKNAFESLALPGKLADCTSKNPLEREIYIVEGDSAGGSAKMGRNRFFQAILPLWGKMLNVEKTREDKVITNDKLIPIIASLGAGVGKTFDITKLRYHKIIIMADADVDGSHIRTLLLAFFFRYMRELIENGYIYIAMPPLYKIKYDNRIYYFYDEKEKEKFLNSIETKNRNSILLQRYKGLGEMNPTQLWETTMDPARRKMRLMNIDDAVEAEKIFVTLMGDLVEPRKEFIEQNALNVINLDV
