gi|422935762|ref|NC_019512.1|  Helicobacter phage 1961P, complete genome. [asmbl_id: NC_019512].26836, gc%: 35.52%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
363..442                           attL                                                                                 N/A                 CATCAATATGGAAAGGGTTTTGAAAAAACAGGGATTTTTTTTAAACCAAAAAACCCAAGCCCACTACTCATGTATTTGTC
536..703                           PHAGE_Helico_1961P_NC_019512: hypothetical protein; F419_gp01; phage(gi422935763)     2e-24               MRQKKETATSFNKLKEITQAIQAQKNSVLKPTKRAFSERQRTTHAKEIKRGVTNA
696..1817                          PHAGE_Helico_1961P_NC_019512: integrase; F419_gp02; phage(gi422935764)               0.0                 MHSYTIYLRDNALYLNYTKNSKRRRMSLNKLIKSLNLSNNQALEYLGGLGLDQILKMLKRASTPDKKQEKKSLPSPKKTKYTTIKQARESFLRKKIGLKETSLSFMRSRFNTISKLLKVKESYRVAKITKESIVNYHNNAFKKYQKNTLTNFNALLKSFLKFCEQEGFIDKSPYFKITLKNAKHGLKDDPFSLDEIKTILDHVPNLRLKAFLITAFFTGLRTGEQLALLWSDIDFENKKINVDKSLNSSGVFTSPKNKTSIRQVDLLEPVERILKELKEGEPNNKKMIFLSIPKRTQEFQKAFKALLKALNLKEKKLYITRHTFASLMISMGEDPLWVSKNMGHNDLNTTYSNYARYIPQPKKERAAFLKGLL
1864..2049                         PHAGE_Helico_1961P_NC_019512: hypothetical protein; F419_gp03; phage(gi422935765)     1e-28               MNVFQYLTYQTIKESDTDLSFFDFIQKLEKLQQTHTIRTSVCNVRNKRVTSYSILLQKKAV
2051..2359                         PHAGE_Helico_1961P_NC_019512: hypothetical protein; F419_gp04; phage(gi422935766)     4e-55               MEQEPLKAIDLEVLKALNKKAYLPKSADKISKELNIDYYYTLKIFNKLEKKGLCDQWVINKKKEKESKNNYYKVCYLNELGKDLCAYLNALKGSKTNKKDQQ
2356..3336                         PHAGE_Helico_1961P_NC_019512: putative phage replication protein; F419_gp05; phage(gi422935767)     0.0                 MNYILKQPMKFGYTQISNEICDDERVSDIAIAIYAYVKKHATTFKLTIEDIAKRFNRNTKTIYKYLNELKELGYIEFERERKNDGTFGKFFQFIMGNFSKNPSGKQGKKTDQKEAKKDASHMENNSMWLKPQKQGSNADNTEAQSTSTYFPAFTLIKDQNKHENIRVSENFSTQEFEEKNQASLNSQDLKNPDRNYSFKSSKKSNPSLFNRFSAFFSSILGNLDTKHLNQYERLAFEEFLNYRSEKHKLSYSTKKALLHQCEALKAQGCDLVACINQSIRRNYNEIYEVMHFEKPNYKSKAEQQNDEIMDQFDYKPNPKYNGLCIW
3346..3702                         PHAGE_Helico_1961P_NC_019512: hypothetical protein; F419_gp06; phage(gi422935768)     4e-62               MRALRYKHANRNFKPKVWTNSVLLESGILEILEALKAIENRSRSQVLERLIIFFIETQKGQNNEKAWERSKRAYKRTLTNQTKKNKLKRKQLERVTKAQKKKQLQANANYPFSFFERA
3533..3799                         PHAGE_Helico_1961P_NC_019512: hypothetical protein; F419_gp07; phage(gi422935769)     3e-43               MKKRGNDRSELIKELLLTKQKKISLRENNLKELQRLKRKNNYKLTQIIRLAFLKGLNQFKKENLLVHLTLKEFDSFLEVLEEKNQKKR
3808..4980                         PHAGE_Helico_1961P_NC_019512: putative DNA repair protein; F419_gp08; phage(gi422935770)     0.0                 MENLIMKSFLDYPKQIEDFLEGIHFSNFTPFNQKIIMALLEMKNKSQVVQLETIRLKIGDEAFRSKEFSTILEADSYPNYLDLKSDFKTYLSLKMQEHLANELIKATRKSEIFDFDFLGKYIKLGFNRNGKYYWEWEEFFKSKPKIEKIHTGINFLDNISDGGFEVGQLILLSGDPEAGKTLLGIQYIINAQQKHKVTYFGFEFSVRKHIETLNSKGFNINKENYFIDDLSCEINELVSQIRGLSREGHKLFIIDSQMKIQAPIVGRTIEEAETTKFTILADLAKRLQVIIVLIIQNSKSDSYAPTGSRKGAHEAHVMIRIEKIKRDELQHIKGYNERGKHRKILILKNKQTGLQGVQLFRIDGYKLFEVGANFNLKKSDFFDHENDFDD
4992..6560                         PHAGE_Helico_1961P_NC_019512: DNA primase; F419_gp09; phage(gi422935771)             0.0                 MITNFEGLKNIVSIVDVVEKYLDLYKCGANLKARCPFHDERSASFFVSQEKNLFKCFGCGVSGDAFKFLQEFKKISFIEAIEEIASMYNYTLEYANNEQEQEKERLKEVLNYANKLFKERLKNEPKVLDYLTLKRAISLEMIEAYGLGYCLHEDLEVLKERFSKDDLIACGLFSNKNEQKELRSFCNYRITIPLKDSKGQIRSFSARLCIPRLLKSSNAPKYINGRETILYNKTFFLYNYHRAIESIKQKNQVIICEGFFDVLAYECFNYKNAICTSGTAFTKEHLAFLNKISAELCFSFDNDMAGIEATIRAIEMCLFNHTTNLSVIKIKDKDIKDMGDYLEKNKRPNLAKINGFKFYCAYLLQKEFDNKTKDFNYKRILRAIKDLNPFIKSDLLKILKSFLPTKDPQIENEKKPVLSLLEARIYATMIESEEFNYIASRYLSPADVQFKDIFKKIVINDFRGLDFLKKYETIREHNYIFCLNELKIKGLKNSLKHAIENKDYKLIEAINSKIKEIQAGLS
6557..8224                         PHAGE_Helico_1961P_NC_019512: putative chromosome segregation protein; F419_gp10; phage(gi422935772)     0.0                 MSWIDIGVGSGGSDSSSNLLSPLINSLGNALNNIYSWSLSGFPWQVDGENSQIVGYYDDPIGYYSVIKKFLAQKNYHSNERLKNALERVINIENRFNQLNHEIRAKENAINSLNSETHHLNNEIHNQTQAINNLNHEIAGLNNGISAQSQAIKQEEEKLNALELQTNAKKQIEKEIKESLKRLEKLKQELKRLKKQPKWEKQFNFLADNPPNLEAQQQHALNQTRKENSRMNFFLTNPYAILPKGFIYEYHNPGKETYNALNAPNNMDGINNQFRTNALNQVLDNSYQKFLPGNDSYNALGGIEQVKALKFYDLAINHAPQSDKLESALFFKQISQYAKGLRLKILSAPSGKKDLARLKKLENTINQEKERLKGKDLNALEQEILKEQENALKLKESIKAKQNYTETLKNAINQKEQAKKPIEQQKQNLESQRNEKEREKQNQEHDKHNKEQERNNINNEINAIGNERLTFKQLGTPWNFLGIQPFLNNNGWGRTYARAFFSDKNKSIREYYELETRIKNILGFYRIGESDERVLQRFLQLSYQQQNELAWLLLQ
8292..10739                        PHAGE_Helico_1961P_NC_019512: JHP1044-like mosaic region protein; F419_gp11; phage(gi422935773)     0.0                 MQNTEIDLKNLPSTPLYPLKNPILTPEQLEQKRKDLIVDLNQKSKELTELGLLDKLGNFLGYQTDNAKEREKQLTDLKTQALDNKLDFKDLPNAIKDDYYNKAETSLFNPFKTKNEIAKEDYQKDLQRKLILNKTSKEITESDKELISDDSGFFNNALDFITGKSEVEKLKEYKEKEKAKDITREIQKAYSAFSNIDKNKDFFSLFTSPDKEAQEKAKQDFETIAKNLYHFDSVIYNEKNEPFVVKGDKVYKINEGFIDNFTQSLLNNKFSLAGSVAGGLTGAKYGKNAGVLGLVGGAIAGSALGATAGAASDAIVTNLALDRENKADEIIRHALSEGALSLATDTIMLGASKVLKPLAKTPLKLAEMSMPFQFTKNFFTGNAKRASEIIETTLSKEQQEALKEFSAQFGGETKINANNANDFLRDKIKSVFKGDETKLKAYDKVKEILTLDNNKEQQQAFIRAIRSDETGNTLAFLIEAANLSPKANANLKSILNQTTENLTKSLKQFDLKDYEIKSVFDHLEQGTKESYDKALNEIIGKLYDDSYKVNLRENIQDATNFEKFLNDLKAQGEIDGQAKSFLRQIEENVYNPNGVTYEQLKNSRQLINAYLRNVKDPSTLGYIQKASANFLKNDIDNGIESLLKQNKSAYEKISELQKSAISDYRDMKQALELVDKAKIRDKNTHENAAVNSLINIIKAQGQKDLSNYTALTKGLQESDKERLELTMLNRLMEESLKQDESLKVFDSAHFFNKLNEFKDEVFTTPKAKEYIDIASGFHKLFKNDAKIAESLKPSTTKNLSQGLATSLSGSKIPMG
10856..13615                       PHAGE_Helico_1961P_NC_019512: JHP1044-like mosaic region protein; F419_gp12; phage(gi422935774)     0.0                 MERSHSISDFSKQLELSAKNSKFTNNTLKIIEELNNGVKQASEELKEAIKPSNLVKSIREQDTRPFEVIEDKEAFFKDLNKNLEANATLLPKGMSVEEFKQSLESVENKDRFLEHLKTRDNSDERLAALNLIEPILREPHIEIFTKDNAIDKKEYIKAFKDENKARLYMLITQDNDKILRTFITDTPERYVRNHVRNADIIHSFIQPNRTAKSDNALSDVVVYENNLTQKPLTSQEELLKTQENALKTQENPPKTTQTPLSPLEQANAEKLAKLESEKLESEKEFLRLKEQEQARKEALKKKLEHERGNAGNIESATKIEVGEDIPTISQEQIPKSRVRLNEREIYDLNYAIVKAKDLKPSLTTGGTQKRTDMNEKQIKSIAQNFDPKKIFGSGGFEDLPIILHDGQVIAGNHRIQGMLNFTPKSRFAYERAIKEYYHIDLKPDELLVRLPSKRLNNTEINNLAASSNQGRFNSESDHAIAVLSHYEPKLKELEKQLNADSVYSLKNMVAKNLNFDKATHPNVTDSNLSLLMFNMPRTKTQGIELLNRWQKEFTNDIKSYEKVKKMFVDNAGSFHNLIHDMSFPNISLNAYLSDIMDRSFANLKNYQTTSESLKDLSEKFYKTNSLEMFEKSDQSVSDISEILGASVARFARFDDPSKALFEALKSDNIKKGLKEFKIADVTKDMFDPNSKEFKDIDIYDFTRYLLMVNREPNENNPTLNRLIEAVKDMQKETQKRIKEASKKNAEAVKKLNFDEIKKLIDESPNNGKDIIVIGEDNLTPEIVEYIHKKHAKVGIERLDEDEITAFNFTYPKNAKAIIDYQGIQHALNKHGINSPSVKFSKQPPITYKDIANYRNIVKNADETIKRGNRIISYKQVNGHFVVVEQINRNKSEFIFKTMFKEKGDYKNAPNYEKNIKEND
13774..13884                       PHAGE_Helico_1961P_NC_019512: hypothetical protein; F419_gp13; phage(gi422935775)     9e-15               MQLFEKWESVTDAYKSFYNEAEHFGLEVSMIERILK
13881..14468                       PHAGE_Helico_1961P_NC_019512: hypothetical protein; F419_gp14; phage(gi422935776)     6e-105              MIEVSEVIAKVRERLNDNEVGDYEILDSVIVENINQALLKICLEFKLNKTITRALLTEEERFLTLNNLLGIESVKLDKKEIEARNTIEKDTGECELLILSDKISVTPFKSGELEVVYYTYEEVSGILDPIKLPKICLDALVYSVLCSLLEIPNNETNFSTLANYKQLLKLAKDNLTNYLSLMYSKNIHFSKVVRV
14486..14650                       PHAGE_Helico_1961P_NC_019512: hypothetical protein; F419_gp15; phage(gi422935777)     7e-26               MAISHFIKWHKKAFLNANNIFNLEKKPLLETTENLIAKEYCLKEKIKNRVINRN
14725..15285                       PHAGE_Helico_1961P_NC_019512: phage structure protein; F419_gp16; phage(gi422935778)     4e-103              MGIKEKEIELETLKREIVQAEASLEQDFIKHMVDKTNEKVEDLFFSDKPEFYRFVFTEQNNYLREKLTDKVSKAMDLSDEIQRDKDAQEIEKDKQAFLNKHPEVDFNELLEFYEEELPKRIKTQIDKLEGVAFFEAVLDYFNAINAKEEEPKKENQEEERPLPKEALGNGVSGIGYANNENIMTRY
15296..16429                       PHAGE_Helico_1961P_NC_019512: phage structure protein; F419_gp17; phage(gi422935779)     0.0                 MLEKLNNINFNNISNNPNLGIEVGREIQNASWIKSPFFSITGTGADRGVRLFSVASQQPFRPRIKAQLTGSGVSGNTDFEANYDNLEILSQTIYPDAFGNSLRSKIKAYSELERIDFIKESVDSLTTWMNEERDKRIVASLTNDFTNYLYNTTMDVATIRKAIFHARNGLKGDNSKAFPIKPIRATMQSVGNVVVQNTSYIILLDSYQANQLKADSEFKELRKLYAFAGEDKGMLYSGLLGVIDNCPVIDAGVWNKLNVGMPNSSISDSDFSRYLNKANVNNIVTPMQLKKKLDNQEKLKNKEISIGCLIGASAVLLAGSKETRFYIDETVDAGRKSLVGVDCLLGVSKARYQSTDGVVTPYDNQDYAVIGLVSNME
16444..16827                       PHAGE_Helico_1961P_NC_019512: phage structure protein; F419_gp18; phage(gi422935780)     3e-66               MKQRVKTVSYLAKAEFEFKAGVYDLVALPAGAEVVKVSLEVVGNLPADLVGNFGIGFRDEDKKDFFLTLSSISNGLCITNTKDYTAVSNRVIVAEVKGEKLISSGENNIKGVVRVLYFLPSETEVEY
16855..17286                       PHAGE_Helico_1961P_NC_019512: phage structure protein; F419_gp19; phage(gi422935781)     5e-79               MFFENPLNTPNYFKPQNAKSTQELVSGPKNFGLLNYSKTSYSDFLNDYKPTPKVSKFSNFMENVGGYGGLGMLGGVIGGLGSLIVGAINYSEQNKNAKESMRMAREQFELEKQRYNAREQERLQNREAIDNIAKANADIMKRF
17355..19172                       PHAGE_Helico_1961P_NC_019512: putative phage portal protein; F419_gp20; phage(gi422935782)     0.0                 MDFTTLQNDFSNDYQKALTANAEFLEAKKYYNGNQLPQDVLNIILERGQTPIVENMFKVIVNKILRYKIESISEIRLSPKQEEDRALSDLLNSLLQVFIQQENYDKSMIERDKNLLIGGLGVIQLWVSQDKDKNVEIEIKAIKPESFVIDYFSTDKNALDARRFHKMLEVSEQEALLLFGDGVIVNYSYMNHERIASVIESWYKEYNEETQGYEWNRYLWNKNAGIYKSEKKPFKNGACPFIVSKLYTDELNNYYGLFRDIKPMQDFINYAENRMGNMMGSFKAMFEEDAVVDVAEFVETMSLDNAIAKVRPNALKDHKIQFMNNQADLSALSQKAEQKRQLLRLLAGLNDESLGMAVNRQSGVAIAQRKESGLMGLQTFLKATDDMDRLVFRLAVSFICEYFTKEQVFKIVDRKLGDRYFKINSNDDNKIRPLKFDLILKSQLKTESRDEKWYNWNELLKILAPIRPDLVPSLVPLMLNDMDSPITNDVLEAIQNANAIQQQNQEANAPYNQQIQALQIQKLQAEIMELQAKAHKYAEQGALSQTTNESEKINQAVAISEMQQQNDNNANNANNQETGTKAKKKLKTSDKTTWRKYPSAQNLDY
19272..20843                       PHAGE_Helico_1961P_NC_019512: terminsae large subunit; F419_gp21; phage(gi422935783)     0.0                 MDKQRALKELAVRELAIRELARRDFYQFVRLKWERYENKPFLDNWHIKYLCRVLECTQPNTCQSDELIRRLILNMPPSYGKTEIIARCFIAWSLGKDRTKKIFYISYSDELCRKIANQVRDLMSSSFYKAIFFNEPLEFLQNNAREFILREGGGLFVTTLKSALTGFHANQILIDDPIKVSGMNSKKEVSLVNYNFKESVISRLQNTESNITILMQRLGTNDLCGFLQSEREFDEKTIRKWKIIQLKALNKDQEFYKIKDFEHTRKKDTPLFEAKHNKEQLEALRLQMGNDEFSAQYQQDPVVSSGGYFEPQYFSRVFTHELGEMNTYIFVDNALSLSQNADNRAIVVVGVENYKESVRYIVLDCFFGIWSEEETIKHILAAKEKYKDAKTFIESDGGGLILYRLLLVALARHNEQNKQNNKGLLSDEIICYTPSRKISKVDKIKAIRPFYNTGFLVFSHSSNNTGQIEKELFSFNPDKPFKKDDCIDALASAIMHESVKAPIKREVKETHNARFHAKPTWRI
20898..21107                       PHAGE_Helico_1961P_NC_019512: hypothetical protein; F419_gp22; phage(gi422935784)     1e-33               MKNTNCIKHFKNIKNIKKKRLAVKKANKEALERLKNKGYRDFIAKVKSKKKGDDEILENLELSYLNAGV
21118..21330                       PHAGE_Helico_1961P_NC_019512: hypothetical protein; F419_gp23; phage(gi422935785)     4e-34               MWSDKIIKITPALLFLFCLLEIFELGLIISNMNKSEKLEAGLTQSLESLEKATNLLGENGMGSEHCKKER
21330..21656                       PHAGE_Helico_1961P_NC_019512: phage holin3 superfamily protein; F419_gp24; phage(gi422935786)     3e-56               MQQHLIILGYETSKIVPYILVMMIGLFVGFLYVLRAIRNEDFKNKTEKVFYIIQGVGSSMLITWISYEIENYFFNLPTSLCVAISGGVGYLGAERVSTLALDILKKRI
21660..21872                       PHAGE_Helico_1961P_NC_019512: hypothetical protein; F419_gp25; phage(gi422935787)     2e-35               MDLTNLEDALNNGNFKEQVYSGLDGVYRISKVLNQLDLLKNFSEHDLEIVGGNGWVFHEHSQAIVYEILK
21869..22096                       PHAGE_Helico_1961P_NC_019512: hypothetical protein; F419_gp26; phage(gi422935788)     3e-38               MKLLFLACVFGVSFSACAKKVIYRDVKVPIKCDIEIPTRPSEHLEALEYLRALLIYTETLENDLKFCAKNNNPLK
22138..22683                       PHAGE_Helico_1961P_NC_019512: hypothetical protein; F419_gp27; phage(gi422935789)     1e-103              MYLVLLERKHDLRSIVRKDKKESGMLGTFRVFESTHDQGISDKKIIKHYEKEEALFSCFSLENSGKPTDTPNLDKPIIARDYELEWSDTSCTVPKEYQNKKCNNLRHEVLQLVDPNNKDFKNRKILIHVGNSAHDTLGCVLLGMQHDEEMIYKSNEAVKKFFDLVKDKGVNNFLFKVIDKA
22687..23247                       PHAGE_Helico_1961P_NC_019512: hypothetical protein; F419_gp28; phage(gi422935790)     5e-97               MDTTRFIRNFVLFKEALQKQNFNNKDLNTTSMQAALQSEQLALSEEAQGGQSEQVRAKMQIDFLGMQANLQNAKAETLNKLIQCQAMLKSLKDNAMINRANALVSLLQVQANAANGITASNFEVAFKIIAQIGSEYNEISLNSGRISVQEKEQTNELKTILNNLSKELEKLNDQSEVNSIQVLAID
23253..23483                       PHAGE_Helico_1961P_NC_019512: hypothetical protein; F419_gp29; phage(gi422935791)     2e-37               MKDAPARLWGFSTLSNAEEGFYNEANEQIASGSVCLFRSDKVGKYIITFKAIKGNITLSKNITISVIANKLKERTS
23483..24061                       PHAGE_Helico_1961P_NC_019512: phage structure protein; F419_gp30; phage(gi422935792)     1e-104              MAYFESITAGRSGLDSFNQALNNQRYANLVLNESMGNFANTIANAGSLFDNAKIREEALKYQRMRDLANDKKQAEAFDLQKRQAEQNMDFSKRQQIMSEESHKQNKALNDHRAKAMKLENALNQQQQEWLMKVTPSAKASVSVGNRAKKPTTQNTISAQNTISAQNTPIAKPKAAIIEEVKSYINSNPFFRY
24061..24381                       PHAGE_Helico_1961P_NC_019512: hypothetical protein; F419_gp31; phage(gi422935793)     7e-54               MFYGVIFRVFRGGLPYIVIVILLVLNNNLKVKLALADERLEINEAKLIKQNEAIEALELESQQYKTNKLLEVIKIKDKYHKIIIKDNTCEAKLQGYEALINAFRKK
24552..25388                       PHAGE_Helico_1961P_NC_019512: phage structure protein; F419_gp32; phage(gi422935794)     1e-155              MNEKTESEIFEEQLNSLYKPIKQNAPESENKNNQALENEPISKALENEPISKALENEPSYISTGIAYLDDKIKNRSITAFDYYMAKKFLGLDLNVNLNGNLNIKSENKTRLASINKATQDIFDDIKALDLGDDLIKKAQEHSGIINQVKLWINHKTGGLKGVDYDLAKTDNARLSYANRVAKTMAQGGQVTQKLRDEAKEMTRWGFRSKEENTARATQTQEILLNSLRKNLQMLESLGGSVSPLMLAKIKEHQGKTDYINETGGKIDLKKYQSLSEGL
25388..26167                       PHAGE_Helico_1961P_NC_019512: terminase small subunit; F419_gp33; phage(gi422935795)     1e-141              MEEKKENENKKVNKAYSNNFKLRVKRYYERSLESKQKIASKFGISNRTLALWAMDGEWENKVILKEIRAMYETHGLSLNALSKKYSVSVSLIRKFKIRDKWEKKKIINEAAGVLEDKLTTDKMGLFLDTKKEEVKEVLKQSLENLNLDPVAVEAIAETSSDELILRAMNTAYIKKQILFCAIVARGELIKMIKKAGGKVKDNINIIMAAEKVSKLFIDAGVSLFGKEQIQAIEYKENNDYRQMNITELIALANADDNAD
26756..26835                       attR                                                                                 N/A                 CATCAATATGGAAAGGGTTTTGAAAAAACAGGGATTTTTTTTAAACCAAAAAACCCAAGCCCACTACTCATGTATTTGTC
