gi|470221770|ref|NC_020566.1|  Staphylococcus aureus subsp. aureus ST228 complete genome, isolate 2759457, gc%: 32.85%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
complement(1406086..1407576)       PROPHAGE_Escher_MG1655: carboxy-terminal protease for penicillin-binding protein 3; SAI5S5_1010240; phage(gi16129784)     2.25e-33            StaphylococcusaureussubspaureusST228MDDKQHTSSSDDERAEIATSNQDQETNSSKRVHLKRWQFISILIGTTLITAVITVVAYIFINQKISGLNKTDQANLNKIENVYKILNSDYYKKQDSDKLSKAAIDGMVKELKDPYSEYLTKEQTKSFNEGVSGDFVGIGAEMQKKNDQIMVTSPMKGSPAERAGIRPKDVITKVNGKSIKGKALDEVVKDVRGKENTEVTLTVQRGSEEKDVKIKREKIHVKSVEYKKKGKVGVITINKFQNDTSGELKDAVLKAHKDGLKKIVLDLRNNPGGLLDEAVKMANIFIDKGKTVVKLEKGKDTEAIQTSNDSLKEAKDMDISILVNEGSASASEVFTGALKDYNKAKVYGSKTFGKGVVQTTREFKDGSLLKYTEMKWLTPDGHYIHGKGIKPDVTIDTPKYQSLNVIPNTKTFKVGDDDKNIKTIKIGLSALGYKVDNESTQFDQALENQVKAFQQANKLEVTGEFNKETNNKFTELLVEKANKHDDVLDKLINILK
complement(1407989..1408489)       Glucose-specific phosphotransferase enzyme IIA component; SAI5S5_1010250             N/A                 StaphylococcusaureussubspaureusST228MFKKLFGKGKEVQKDIAIYAPLTGEYVKIEDIPDPVFAQKMMGEGFGINPTEGEVVSPIAGRVDNVFPTKHAIGLKADNGLELLVHIGLDTVQLDGEGFEVLVSSGDEVNVGDPLVRFNLEFINNNAKSVISPIIITNTDQAASINIYDENAVIKGETKVIDVTMN
complement(1408922..1409455)       PHAGE_Temper_phiNIH1.1_NC_003157: putative methionine sulfoxide reductase; SAI5S5_1010260; phage(gi16271776)     1.47e-21            StaphylococcusaureussubspaureusST228MTKEYATLAGGCFWCMVKPFTSYPGIKSVVSGYSGGHVDNPTYEQVCTNKTGHVEAVQITFDPEVTSFENILDIYFKTFDPTDDQGQFFDRGESYQPVIFYHDEHQKKAAEFKKQQLNEQGIFKKPVITPIKPYKNFYPAEDYHQDYYKKNPVHYYQYQRGSGRKAFIESHWGNQNA
complement(1409541..1410380)       PHAGE_Staphy_SPbeta_like_NC_029119: DegV domain-containing protein; SAI5S5_1010270; phage(gi985761237)     5.47e-64            StaphylococcusaureussubspaureusST228MTKQIIVTDSTSDLSKEYLEVNNIHVIPLSLTIEGASYVDQVDITSEEFINHIENDEDVKTSQPAIGEFISAYEELGKDGSEIISIHLSSGLSGTYNTAYQASQMVDANVTVIDSKSISFGLGYQIQHLVELVKEGVSTSEIVKKLNHLRENIKLFVVIGQLNQLIKGGRISKTKGLIGNLMKIKPIGTLDDGRLELVHNARTQNSSIQYLKKEIAEFIGDHEIKSIGVAHANVIEYVDKLKKVFNEAFHVNNYDINVTTPVISAHTGQGAIGLVVLKK
complement(1410395..1410874)       PHAGE_Staphy_SPbeta_like_NC_029119: dihydrofolate reductase type 1; SAI5S5_1010280; phage(gi985761244)     8.38e-94            StaphylococcusaureussubspaureusST228MTLSILVAHDLQRVIGFENQLPWHLPNDLKHVKKLSTGHTLVMGRKTFESIGKPLPNRRNVVLTSDTSFNVEGVDVIHSIEDIYQLPGHVFIFGGQTLFEEMIDKVDDMYITVIEGKFRGDTFFPPYTFEDWEVASSVEGKLDEKNTIPHTFLHLIRKK
complement(1411074..1412114)       PHAGE_Staphy_SPbeta_like_NC_029119: thymidylate synthase; SAI5S5_1010290; phage(gi985761245)     0.0                 StaphylococcusaureussubspaureusST228MITKCYIKLSYIKLNIHTINNENEVLSHMLNSFDAAYHSLCEEVLEIGNTRNDRTNTGTISKFGHQLRFDLSKGFPLLTTKKVSFKLVATELLWFIKGDTNIQYLLKYNNNIWNEWAFENYIKSDEYNGPDMTDFGHRALSDPEFNEQYKEQMKQFKQRILEDDTFAKQFGDLGNVYGKQWRDWVDKDGNHFDQLKTVIEQIKHNPDSRRHIVSAWNPTEIDTMALPPCHTMFQFYVQDGKLSCQLYQRSADIFLGVPFNIASYALLTHLIAKECGLEVGEFVHTFGDAHIYSNHIDAIQTQLARESFNPPTLKINSDKSIFDINYEDLEIVDYESHPAIKAPIAV
complement(1412907..1414031)       Conserved virulence factor C; SAI5S5_1010300                                         N/A                 StaphylococcusaureussubspaureusST228MEILRIEPTPSPNTMKVVLSYTREDKLSNTYKKVEETQPRFINQLLSIDGITSIFHVMNFLAVDKAPKADWEVILPDIKAAFSDANKVLESVNEPQIDNHFGEIKAELLTFKGIPYQIKLTSADQELREQLPQTYVDHMTQAQTAHDNIVFMRKWLDLGNRYGNIEEVMDGVLEEVLATYPESQLPVLVKHALEENHATNNYHFYRHVSLDEYHATDNWKTRLRMLNHFPKPTFEDIPLLDLALSDEKVPVRRQAIVLLGMIESKEILPYLYKGLRDKSPAVRRTAGDCISDLGYPEALPEMVLLLDDPQKIVRWRAAMFIFDEGNAEQLPALKAHINDNAFEVKLQIEMAISRIENGDEALGSVWKQMANRTI
1414771..1415475                   PHAGE_Halovi_HCTV_1_NC_021330: hypothetical protein; SAI5S5_1010310; phage(gi509140748)     1.28e-13            StaphylococcusaureussubspaureusST228MYNEILGLVTFIATFVLMVLMYRFFGKQGLIAWVAIGTIIANIQVIKTVEIFGISATLGNVMFASIYLATDILNDIYGRRVAKRAVWLGFSSTLIMIIVMQLSLHFIPAPEDMAQKALHAIFDVVPRIALGSIVAYIIGQHIDVFIFSLIKKVFSSDKTFFIRAYGSTFLSSIIDTALFVAIAFIGSLPGTVVFEIFITTYVLKLASTVFNVPFGYIAKSFYRKGKIDKLDQGY

#### region 2 ####
complement(1841127..1841846)       PHAGE_Staphy_phiETA2_NC_008798: exfoliative toxin A; SAI5S5_1013250; phage(gi122891783)     1.01e-10            StaphylococcusaureussubspaureusST228MNKNIVIKSMAALAILTSVTGINAAVVEETQQIANAEKNVTQVKDTNNFPYNGVVSFKNATGFVIGKNTIITNKHVSKDYKVGDRITAHPNGDKGNGGIYKIKSISDYPGDEDISVMNIEEQAVERGPKGFNFNENVQAFNFAKDAKVDDKIKVIGYPLPAQNSFKQFESTGTIKRIKDNILNFDAYIEPGNSGSPVLNSNNEVIGVVYGGIGKIGSEYNGAVYFTPQIKDFIQKHIEQ
complement(1841904..1842668)       PHAGE_Staphy_phiETA2_NC_008798: exfoliative toxin A; SAI5S5_1013260; phage(gi122891783)     3.09e-15            StaphylococcusaureussubspaureusST228MYLDIKIIKKEELKMNKNVVIKSLATLTILTSVTGIGTTLVEEVQQTAKAENNVTKIQDTNIFPYTGVVAFKSATGFVVGKNTILTNKHVSKNYKVGDRITAHPNSDKGNGGIYSIKKIINYPGKEDVSVIQVEERAIERGPKGFNFNDNVTPFKYAAGAKAGERIKVIGYPHPYKNKYVLYESTGPVMSVEGSSIVYSAHTESGNSGSPVLNSNNELVGIHFASDVKNDDNRNAYGVYFTPEIKKFIAENIDK
complement(1842751..1843458)       PHAGE_Staphy_phiETA2_NC_008798: exfoliative toxin A; SAI5S5_1013270; phage(gi122891783)     6.42e-12            StaphylococcusaureussubspaureusST228MNKNVMVKGLTALTILTSLGFAENISNQPHSIAKAEKNVKEITDATKAPYNSVVAFAGGTGVVVGKNTIVTNKHIAKSNDIFKNRVAAHYSSKGKGGGNYDVKDIVEYPGKEDLAIVHVHETSTEGLNFNKNVSYTKFAEGAKAKDRISVIGYPKGAQTKYKMFESTGTINHISGTFIEFDAYAQPCNSGSPVLNSKHELIGILYAGSGKDESEKNFGVYFTPQLKEFIQNNIEK
1844417..1844998                   PHAGE_Staphy_71_NC_007059: ORF024; SAI5S5_1013280; phage(gi66396064)                 1.25e-28            StaphylococcusaureussubspaureusST228MNTKFLGKTLVASALVLTTLGTGLHSSYLGLNTNKVVKTAKAEEKMTNGQLWKKVKDSLIDSNIISGNENEEITVTYVNKTGYSSSVSAYGNNNDDFSSTPSNFSKLKEIDLKKDNVPSDDFNTTVSGEDSWKTLTSKLKEKGLVTDGQTVTIHCNDKSDNTKSSVSGKVGADLTSGNGTTFKKRFIDKITID
1846423..1847214                   PHAGE_Lactob_Lj965_NC_005355: hypothetical protein; SAI5S5_1013290; phage(gi41179221)     6.08e-05            StaphylococcusaureussubspaureusST228MHDNTIKSISKDYFDYLQTESKFIPLENETIEFYSPIVDYFGDSISVNISFSGDRYKLTDHGETLWNMEQLGIDLTSNKKQKKYQLLNNIVQNYSLVIENKHINFYTNRINLSQAIHDYVLAISEISYLGILKKENIKSLFKDEVMQYFLSNRKIYPNIFPEFKVEGKSKLIHSFEAVFPGEATEYVKTIKRIDKNNAKNVLFDWNDVEIHRNKNFDSNARLNIITEQQDDISEAVSTMLSQYNVEVFSFENKKQLEEKFSNV
complement(1847584..1848567)       PHAGE_Staphy_phi5967PVL_NC_019921: Panton-Valentine leukocidin chain S; SAI5S5_1013300; phage(gi431810286)     0.0                 StaphylococcusaureussubspaureusST228MKMKKLVKSSVASSIALLLLSNTVDAAQHITPVSEKKVDDKITLYKTTATSDNDKLNISQILTFNFIKDKSYDKDTLVLKAAGNINSGYKKPNPKDYNYSQFYWGGKYNVSVSSESNDAVNVVDYAPKNQNEEFQVQQTLGYSYGGDINISNGLSGGLNGSKSFSETINYKQESYRTTIDRKTNHKSIGWGVEAHKIMNNGWGPYGRDSYDPTYGNELFLGGRQSSSNAGQNFLPTHQMPLLARGNFNPEFISVLSHKQNDTKKSKIKVTYQREMDRYTNQWNRLHWIGNNYKNQNTVTFTSTYEVDWQNHTVKLIGTDSKETNPGV

#### region 3 ####
1850868..1851656                   PHAGE_Lactob_Lj965_NC_005355: hypothetical protein; SAI5S5_1013320; phage(gi41179221)     7.27e-51            StaphylococcusaureussubspaureusST228MTTFDAKKLKKEYLDWYNQILEFSNLSNNSVKIDTPFKDNSLDNLKIYALYDQSRDMITLTDDGYTIFGLENNGVSINKFKKRKKIFEEHLSAYGIKYNDKTHEIFVQTNFKNFNKSKHNLLQCLIFVNDMYLLSNPKSQNIFTEDVANKLDEHNIYYGRDIPIIGSSGVVHNFDFFISAKKNQKEKFINVFSNPNNSMIIKSKITDAMQAKKIKRHRQNEFIFILNDSKKEINEHNKNLLHENYISTIDYSELDEKIGLLI
1852490..1852984                   hypothetical protein; SAI5S5_1013330                                                 N/A                 StaphylococcusaureussubspaureusST228MRRLLSLLLASTMILVACGNANNENKKKEDEKKSEVKKEATKNNDKPKNEKKNQDINKNNNEQVQNVNNKQPVLNNNSNHNNQQQSNKNNYTVIENGNTVTEIYNGQSHTTTNNPIREEYVEGETDPIYKREYKHFYTPEEAQRAQENSDQILREMGLEPERYE
1853304..1854095                   PHAGE_Lactob_Lj965_NC_005355: hypothetical protein; SAI5S5_1013340; phage(gi41179221)     1.26e-25            StaphylococcusaureussubspaureusST228MEGYLVKTIEERMNEYFNWLKQNYIFKELDSSTEITTTFKNHLNDFIRIYADTLPNNEICLSDDGLTINELEMLGIDINTKTRTKLIQNILNQFNLKLVDKEITADVKNESFAQSKHNLIQGILKIYDLTLTTKSNVTNIFYEEVFEFLYDQKIRGLAQVSVSGESGLKYSIDYIVSETKSQPEKLVNFTNNLDFNKITNEAYIYRDIKPNRPSRNKLEPIMLIIVNDVDHPINERAQTVAEHENLEILKWSNKSKIIETLTS
complement(1854647..1855423)       PHAGE_Strept_T12_NC_028700: exotoxin type A; SAI5S5_1013350; phage(gi966201546)      2.87e-54            StaphylococcusaureussubspaureusST228MKKLSTVIIILILEIVFHNMNYVNAQPDPKLDELNKVSDYKNNKGTMGNVMNLYTSPPVEGRGVINSRQFLSHDLIFPIEYKSYNEVKTELENTELANNYKDKKVDIFGVPYFYTCIIPKSEPDINQNFGGCCMYGGLTFNSSENERDKLITVQVTIDNRQSLGFTITTNKNMVTIQELDYKARHWLTKEKKLYEFDGSAFESGYIKFTEKNNTSFWFDLFPKKELVPFVPYKFLNIYGDNKVVDSKSIKMEVFLNTH
complement(1855706..1856461)       PHAGE_Staphy_phiNM3_NC_008617: enterotoxin type A precursor; SAI5S5_1013360; phage(gi118725111)     3.08e-53            StaphylococcusaureussubspaureusST228MRLFYIAAIIITLLCLINNNYVNAEVDKKDLKKKSDLDSSKLFNLTSYYTDITWQLDESNKISTDQLLNNTIILKNIDISVLKTSSLKVEFNSSDLANQFKGKNIDIYGLYFGNKCVGLTEEKTSCLYGGVTIHDGNQLDEEKVIGVNVFKDGVQQEGFVIKTKKAKVTVQELDTKVRFKLENLYKIYNKDTGNIQKGCIFFHSHNHQDQSFYYDLYNVKGSVGAEFFQFYSDNRTVSSSNYHIDVFLYKD
complement(1857425..1858153)       PHAGE_Staphy_phiNM3_NC_008617: enterotoxin type A precursor; SAI5S5_1013370; phage(gi118725111)     9.21e-33            StaphylococcusaureussubspaureusST228MKKFKYSFILVFILLFNIKDLTYAQGDIGVGNLRNFYTKHDYIDLKGVTDKNLPIANQLEFSTGTNDLISESNNWDEISKFKGKKLDIFGIDYNGPCKSKYMYGGATLSGQYLNSARKIPINLWVNGKHKTISTDKIATNKKLVTAQEIDVKLRRYLQEEYNIYGHNNTGKGKEYGYKSKFYSGFNNGKVLFHLNNEKSFSYDLFYTGDGLPVSFLKIYEDNKIIESEKFHLDVEISYVDSN
complement(1858188..1858907)       PHAGE_Staphy_phiNM3_NC_008617: enterotoxin type A precursor; SAI5S5_1013380; phage(gi118725111)     9.49e-31            StaphylococcusaureussubspaureusST228MKRILIIVVLLFCYSQNHIATADVGVLNLRNYYGSYPIEDHQSINPENNHLSHQLVFSMDNSTVTAEFKNVDDVKKFKNHAVDVYGLSYSGYCLKNKYIYGGVTLAGDYLEKSRRIPINLWVNGEHQTISTDKVSTNKKLVTAQEIDTKLRRYLQEEYNIYGFNDTNKGRNYGNKSKFSSGFNAGKILFHLNDGSSFSYDLFDTGTGQAESFLKIYNDNKTVETEKFHLDVEISYKDES
complement(1859188..1859952)       PHAGE_Staphy_phiN315_NC_004740: enterotoxin P; SAI5S5_1013390; phage(gi30043936)     6.09e-42            StaphylococcusaureussubspaureusST228MLNVLLLILNLIAICSVNNAYANEEDPKIESLCKKSSVDPIALHNINDDYINNRFTTVKSIVSTTEKFLDFDLLFKSINWLDGISAEFKDLKVEFSSSAISKEFLGKTVDIYGVYYKAHCHGEHQVDTACTYGGVTPHENNKLSEPKNIGVAVYKDNVNVNTFIVTTDKKKVTAQELDIKVRTKLNNAYKLYDRMTSDVQKGYIKFHSHSEHKESFYYDLFYIKGNLPDQYLQIYNDNKTIDSSDYHIDVYLFT

#### region 4 ####
complement(2014727..2015968)       PHAGE_Staphy_42E_NC_007052: ORF007; SAI5S5_1014780; phage(gi66395515)                0.0                 StaphylococcusaureussubspaureusST228MNYGQFEIESTIIATLLKQPDVLEKIRVKDYMFTNEKFKTFFNYVMDVGKIDHQEIYLKATKDKEFLDADTITKLYNSDFIGYGFFERYQQELLESYQINKAKELVTEFKQQPTNQNFNNLIDELKDLKTITNRKEDGTKKFVEEFVDELYSDSPKKQIKTGYKLMDYKIGGFEPSQLIVIAARPSVGKTGFALNMMLNIAQNGYKTSFFSLETTGTSVLKRMLSTITGIELTKIKEIRNLTPDDLTKLTNAMDKIMKLGIDISDKSNITPQDVRAQAMRHSDRQQVIFIDYLQLMDTDAKVDRRVAVEKISRDLKIIANETGAIIVLLSQLNRGVESRQDKRPMLSDMKESGGIEADASLAMLLYRDDYYNRDEDDSITGKSIVECNIAKNKDGETGIIEFEYYKKTQRFFT
complement(2016321..2016992)       PHAGE_Staphy_42E_NC_007052: ORF016; SAI5S5_1014790; phage(gi66395524)                1.69e-164           StaphylococcusaureussubspaureusST228MQQIHYWLNNSKHKYDGKTWIFNSYPEWQKQFPFWSERTIKRTFGSLEKQNLLHVGNYNKAGFDRTKWYSINYETLNKLVARPSGQNGPTMRTNWHDARGQNDPTNTIDYTETNKHRETDDVSKSFKYISTNLEIIQNPLKAEQLEHEIKSFKQDQFEIVKVATDYCKENNKGLNYLLTVLKNWNKEGVSDKESAENKLKPRNSKKETTDDVIAQMEKELSDD
complement(2017069..2017743)       PHAGE_Staphy_42E_NC_007052: ORF019; SAI5S5_1014800; phage(gi66395527)                7.69e-167           StaphylococcusaureussubspaureusST228MPKITSYITQDDGTTTVVISGVELGNKETLLLDNGFDVEVDVNVIDPFQITGKQRRKIFALVKDIEEHTGQPMDYMRHMFIEFVRTYYGYDERISLSNCTRTQASQIIEATLDWTFYNDIPLSYKTSNLLKQDKSFLYWSTVNRNCVICGKPHADLAHYEAVGRGMNRNKMNHYDKHVLALCREHHNEQHAIGVKSFDDKYQLHDSWIKVDERLNKMLKGEKNE
complement(2017744..2018295)       PHAGE_Staphy_88_NC_007063: ORF027; SAI5S5_1014810; phage(gi66396359)                 6.19e-134           StaphylococcusaureussubspaureusST228MNELWKDVVGYEGIYEVSSKGRVRTHKNKVTWSNRYQKWRHWKQRYLKDKTPNGRDVRVTLWKNGKRKDFLVHRLVAFAFIPMIEGKNCINHIDGNPKNNNVENLEWCNHLENNRHAFETGLMHTNMAVKLINHLGIEYEFISMSRAGKFLGRSHSYISDKIKNNHKDVTDIHGNKYKFEKLI
complement(2018731..2019354)       PHAGE_Staphy_53_NC_007049: ORF024; SAI5S5_1014820; phage(gi66395393)                 3.16e-154           StaphylococcusaureussubspaureusST228MTEQTLFEQLNSKNVNDHTEQKNGLTYLAWSYAHQELKKIDPNYTVKVHEFPHPDINTENYFVPYLATPEGYFVQVSVTVKDSTETEWLPVLDFRNKSLAKGSATTFDINKAQKRCFVKASALHGLGLYIYNGEELPSASDNDITELEERINQFVNLSQEKGRDATIDKTMRWLKISNINKLSQKQIAEAHQKLDAGLKQLDSEEKQ
2020984..2021625                   PHAGE_Staphy_StauST398_4_NC_023499: hypothetical protein; SAI5S5_1014830; phage(gi588498254)     2.92e-142           StaphylococcusaureussubspaureusST228MILVYIDPLKNVRLSINNAINNVEISRSMAIKQSLKLKYQLDIINKNNLNLFSNFKVDFHLNNLIEMNFNLRNSFSSLTFQRNLFSEDAIKSFKELYRFDDEIVLQAQQTIRDFYINPTAISTLAEAINSTYPINEQGTYKRNDKFVNRIKNDFPHPFKQLIRWSNGIAAGADIQIFVTNYINENDLHIQNSLIVAIVCLLSFLSTYCSHSKK
