gi|482902549|ref|NC_021151.1|  Salmonella enterica subsp. enterica serovar Typhimurium str. U288, 4852606, gc%: 52.18%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
310500..310511                     attL                                                                                 N/A                 TATAGGGCAGGG
313971..315200                     PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage integrase protein; STU288_01355; phage(gi169257266)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrU288MAISDSYLKSCLGRERDKVEEKADRDGLWVRISKKGAVTFFYRFRFLGKQDKMTIGSYPEFGLKAAREEVTKWAAILARGENPRIRQSLDKAKINSQYTFEELFREWHAMVCVQKETSDQILRSFELHVFPKLGKYPAHQLTLHNWLTVLDRLAQGYTEITRRVISNGRQCYSWAVKRQLLEVNPLSEMSGRDFGIQKKMGERTLDRKEIAIVWRAIEDSRLIERNKILYKLSLIWACRVGELRQAEVSHFDFEEGVWTVPWENHKTGRKSKKPIIRPIIPEMLPLIQRAIELAPGRFVFSKYADKPMSEGFHMSISSNLVKFMLKAYNEQVPHFTIHDLRRTARTNFSELTEPHIAEMMLGHKLPGVWSVYDKYTYIEEMREAYSKWWARLMSIIEPDVLEFTPRQTG
complement(315178..315462)         PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; STU288_01360; phage(gi169257265)     2.53e-64            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MSKKIRDFELMSTREICCQLRISSRTLERYRKRPSDNNPFPEPDCSYMGGSNKWLKTKVNEWQVREMSRPTRRPMSHLNLPRDNKGRLIRSDVA
complement(315503..315742)         PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; STU288_01365; phage(gi169257270)     1.19e-52            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MRLINRSKQSPLGRRACDVALAAHHEKFGDYGRQKHVTNYTVVVDGVKVPVEVVNRATSYVATAMIGVRKLRNLPAQAN
complement(316906..319791)         PHAGE_Phage_Gifsy_2_NC_010393: putatitive bacteriophage exodeoxyribonuclease VIII; STU288_01380; phage(gi169257272)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrU288MSGTNPVFLVRKAKKSSGQKDAVLWCSDDFEAANATLDYLLIKSGAKLKDYFKAVATNFPVVNELPPEGELSLTFCDYYQLAKDNMTWTQIPGVTLPSSEAAAAARQHIVDGVDTETGEVLEDHTENFGNESNSPAQATAPAPELTVVATMPLRHRVLAQYIGEGEYLYHVDASQKKEILRLEMDTDNSYVQNLLLAAENVEAFKKAIEHDIHKIVNAVKKVFPVDGKTPELATVIQFLKTWFETEHIDRGLLVKEWAKGNRVSAIQRTESGANAGGGNKTDRNPDYEHTLDTLDVEIAMATLPMDFNIYELPGSVYRRAKEIVKKKESPFKEWSAALRATPGILDYSRAAIFALIRSAHPEFYHYPGRLQGYINANLTETDHENPTEEALTAARHTPEKDAVEEANRQLAAARGEYVEGISDPNDPKWVKTGTSQPTTEPELVKNVGNGIFDVSALMQNSSTHGTETNPETTSNVQVQKADSDEKQAGDAVQAGEDDLGTGKEAVTVENQNQAEAQQNVPESQQEEPEAAWPEYFEPGRYEGVPNEVYHAANGISSTQVKDARVSLMYFNARHVEKTIVKERSPVLDMGNLVHALALQPENLEAEFSVEPEIPEGAFTTTATLREFIDAHNASLPALLSADDIKALLEEYNATLPSQMPLGASVDETYASYEQLPEEFQRIENGTKHTATAMKACIKEYNVTLPAPVKTSGSRDALLEQLAIINPDLVAQEAQKSSPLKVSGTKADLIQAVKSVNPAVVFADELLDAWRENTEGKVLVTRQQLSTALNIQKALLEHPTAGKLLTHPSRAVEVSYFGIDEETGLEVRVRPDLELDMGGLRIGADLKTISMWNIKQEGLRAKLHREIIDRDYHLSAAMYCETAALDQFFWIFVNKDENYHWVAIIEASTELLELGMLEYRKTMREIANGFDTGEWSAPITEDYTDELNDFDVRRLEALRVQA
complement(319918..320217)         PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; STU288_01385; phage(gi169257273)     5.83e-52            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MKNSPLIWRGFIHPEFKTGEIMEIVKIEMNLKAVNKSIALFNCENLDGGYVLGKFDSPHCAVKAISLLTVKVSDGEQAGFGNYRSYKLDYSEKFYQTIH
complement(320701..321117)         PHAGE_Phage_Gifsy_2_NC_010393: putative bacteriophage regulatory protein; repressor; Lambda gpCI analog; STU288_01390; phage(gi169257276)     4.84e-98            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MNMNKNLHPIFAKRIQQVLDENGWSMADLSRRVMLSHTSVRKWASGTSVASGERLKRLSAVTGRPEYWFFMEPGDESEGERAEPKPRVLDEKEETLLSLFNQLPEAEKLRVILHTKAVLQEMDLLKNNVFDLINDLKK
321231..321470                     PHAGE_Phage_Gifsy_2_NC_010393: putative bacteriophage regulatory protein; Lambda gpCro analog; STU288_01395; phage(gi169257277)     1.32e-53            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MDNQLKIKISNHMTQMSIGEHFGISSQAVGKWLRKGVIPPRRILPLCEILEWKVTPHEIDPAAYPNPTDGLPSQEASAK
321661..321810                     PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage transcriptional activator; Lambda gpCII analog; STU288_01400; phage(gi169257278)     9.45e-28            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MAKELAFLGIQAAPPEAVLVSRNYLTAVEILADAGLKAERARPDALGWD
321895..322878                     PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage DNA replication protein; Lambda gpo homolog; STU288_01405; phage(gi169257279)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrU288MSMSNTAEIYKFPAPIPTQQECRMADLENGYLRLANQIQDALCIVELSGREFRVLNAIIRLTYGWSKKSDRIANSLIADKTTLKVKHVSEAVLSLAYRNIIILRRIGQTRYIGINTNLDKWAYSKPHCSKCPVSFPDDEIATWIISVPETRDSYPRKGGRASPKTGIVIPENRDSVLPHSAIPENGDSYPRKEGRASPKTGNTKDIIPKTNIKDLTPFNPPKGKVKFDPLSIPVPEWLNAASWNEWVTYRQQSGKPIKTELTVTKAFRLLKECLDEGHDPVNVINTSIANGYQGLFKPKFALNDRRAGRDVNHISAPDKTIPTGFRG
322881..323630                     PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage DNA replication protein; STU288_01410; phage(gi169257280)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrU288MKNVIGTGSALDRLKRIIPASVQPKFSTADEWRAWQEAEGRKRSEELDRMNQKSRTEKIFGRSGIQDLHRSCTFANYEVSGEGQRKAYTMAKSYAQNFGSGFASFVFSGGPGTGKNHLAAAIGNHLLAGGHSVLVVTIPDLMLRVRECYDGGQSEASLLDDLCKVDLLVLDEVGIQRGSSGEKVILNQVIDRRLSSMRPVGVLTNLNHEGLLDSLGARVIDRLQMDGGMWVNFDWESYRKNVSHLRIVK
323641..323988                     PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; STU288_01415; phage(gi169257281)     6.28e-80            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MARPKTQSERMIILERIIGLVKEQGRITTNDVVAIFGVHRTTAEKYLRIALERGGFIRHGRCGIFRDQRAVIDYDLRRYSSSQVTGFSALPVLEKSPVMQVYGASKMSINKGGAQ
323985..324296                     PHAGE_Phage_Gifsy_2_NC_010393: conserved hypothetical bacteriophage protein; STU288_01420; phage(gi169257282)     4.88e-70            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MSNIDKRALREVAERATPGNWRRTSSLFNGITVTPFSLCGEEVTLAHTVEKRDAEFIAAANPATVLALLDVLYEFGEDEVAISEYVTNLEDALRVAAAPQQEE
324395..324664                     PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; STU288_01425; phage(gi169257283)     3.11e-60            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MYQRMIFEEGKEPRLYSSQHDSKFIPISNNNGKVQKVPVMELKDTRGDVFYAYNYAYSGKKPSNDEIYKAIDELKPIGEKFEMSKTISD
324956..325189                     PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage damage-inducible protein DinI; STU288_01430; phage(gi169257284)     4.20e-51            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MRIELVISRAKQLPEGAVPALEKELITRLQNQYENCNLTIRRGSQDGLSIVGAADGDKKRIQSILQETWESADDWFY
325605..326207                     PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; STU288_01435; phage(gi169257286)     2.21e-147           SalmonellaentericasubspentericaserovarTyphimuriumstrU288MAHELQLIKQSSGILIPATPETSEILQSKIKLGAVLVAEFRQVRNPAFHRRFFALLNLGFEYWEPTGGTISANERKLVNGYAKFLAAYGGNESALLDAAEQYLEQIANRRVTNGISLCKSFDAYRAWVTVEAGHYDAIQLPDGTLRKHPRSIAFSSMDEVEFQQLYKSALDVLWRWILSRTFRTQREAENAAAQLMSFAG
326207..326413                     PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; STU288_01440; phage(gi169257287)     1.28e-44            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MAMKYSWFHHHDCTTEQADTLISDYQKRGVRTEKSLNPDFITWTVSAKLPEYAHRVRTPKSLRQKVWG
326416..327027                     PHAGE_Phage_Gifsy_2_NC_010393: NinG; STU288_01445; phage(gi169257288)                5.55e-146           SalmonellaentericasubspentericaserovarTyphimuriumstrU288MAKLPRRKCANKECRQWFHPIREGQIVCSYQCASAVGKEQTRKAREAAQRKAQSLQRAAEKKERAAWRQRKAAVKPLKHWIDLTQRAVNDICRETELAEGLGCISCGTKTAFAWHAGHYRSTAAAGHLRFTRFNIHLQCDVCNVYKSGNIEAYRAALVERYGEAAVLALENNNTPHRWTVEELKEIRLAALADLRALKKLEAA
327160..327957                     PHAGE_Phage_Gifsy_2_NC_010393: prophage antitermination protein; late gene regulator; Lamba gpQ homolog; STU288_01450; phage(gi169257290)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrU288MNLESLPKYFSPKSMMPGAVPCGITSDTLTITDVMASLGLLTAKAAVGIELYLAKAGVLSSENIIAYIRQLAEQRAERHGALRKMEKGKRSKFLDTMARYVFRDYSLSAASLVTCSSCHGAKLIDAEVFTNKVTYPDGKPPKWVKDTKGISPSDWEVWKSVREQVRVVCKACDGKGHVKNECRCRGRGEILDKKKSELQGVPVYKKCPRCKGRGYPRLKDTEIFKALGVTEMVWRYNYKLFFDRLVEHCHIEESYAEKVLGNVTR
327993..328340                     PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; STU288_01455; phage(gi169257291)     1.56e-63            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MANLIPTMGYYACDVTRIKNLASAGFLFFWWYIPLVSNHRGGDMGFYYVFQYKPKGMSSGKHLNVSEEFSDRNEAKRAKSRHMINDPDCVFSGIVQADSPAAVLQEVQAESLNRL
complement(328775..329224)         PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; STU288_01460; phage(gi169257293)     2.23e-107           SalmonellaentericasubspentericaserovarTyphimuriumstrU288MKNTALGKFIFIVGTALLLGGCSGMVMPPYATHGTSVGIIAPAGGYSEWHTDSRNHTTGDSHSQSQGNCTQSEDSQLNENGLTRTHQSNCNTRSQTHSSSTSKTRSSSVGFSVGGPVGASIGLIKQMESMNRAPANDMSSNEMFKNFGF
complement(329585..330271)         PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage virulence determinant; GtgA; STU288_01465; phage(gi169257294)     3.63e-170           SalmonellaentericasubspentericaserovarTyphimuriumstrU288MPTGIKPIFINNMMSTYGLSHPHDSKVFPDLPEHQDNPSQLRLQHDGLATDDKARLEPMCLAEYLISGPGGMDPDIEIDDDTYDECREVLSRILEDAYTQSGTFRRLMNYAYDQELHDVEQRWLLGAGENFGTTVTDEDLESSEGRKVIALNLDDTDDDSIPEYYESNDGPQQFDTTRSFIHEVVHALTHLQDKEDSNPRGPVVEYTNIILKEMGHTSPPRIAYEFSN
330541..330876                     PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage lysis protein; holin; STU288_01470; phage(gi169257295)     1.86e-75            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MKMNDKTPEFWAAVLTGLKNAWPQILGALMAGLIAYGRLIYDGATRKNKWLEGVLCGALSLCVTSALDVVGLPVSISPFVGGIIGFVGVDKLREIAISALKKRAGVNDENQ
330863..331312                     PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage lysis protein; endolysin; lysozyme; STU288_01475; phage(gi169257296)     2.94e-106           SalmonellaentericasubspentericaserovarTyphimuriumstrU288MRISEKGITLIKEFEGCSLTAYPDPGTGGDPWTIGYGWTHSVDGKPVKPGMMIDEATAERLLNTGLVGYENDVSRLVKVKLTQGQFDALVSFAYNLGARTLSSSTLLRKLNAGDYAGAADEFLRWNKAGGKVLNGLTRRREAERALFLS
331330..331809                     PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage lysis protein; Lambda gpRz homolog; STU288_01480; phage(gi169257297)     5.38e-115           SalmonellaentericasubspentericaserovarTyphimuriumstrU288MFVGLLLVSLIVAGRLANHYRNNAITYKEQRDTVTHRLTLANATITDMTKRQRDVAALDEKYTKELADAKAENDALRDDVAAGRRRLYVNATCPAVPTGKSTSTARMDNAASPRLADSAQRDYFALKERVKTMQKQLEGAQAYIRTQCHGNAGKTSNQW
332016..332549                     PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage DNA packaging protein; terminase, small subunit; STU288_01485; phage(gi169257298)     1.24e-127           SalmonellaentericasubspentericaserovarTyphimuriumstrU288MDQEIKSLELNITQLSAITGAHRQTIASRLKGVKTSGGNGSNLKIYRLVDILTAMMTMPAVTGENDPNKMKPSDRRAWFQSEMTRIELEKEMRTLIPASEVLSVYAVMAKTVVKTLEILPDLLERDAALPPDALEMTQKIIDQLREDLASMTYQACADAINGDDDDNGDEGQEEEQE
332641..334644                     PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage DNA packaging protein; terminase, large subunit; STU288_01490; phage(gi169257299)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrU288MRVPRDAGNSVAWESTLTPYVVEAMNCLSSRSYDAVVFVAPARTGKTLGLIDGWISYNIVCDPSDMLVVQMTQDKAQEHSKRRLAKMFRHSPAIARRLSPHRNDNNVHDKTFRDGSFLKIGWPSINVFSSSDFKCVALTDYDRFPEDVDGEGDAFSLASKRTTTFMSLGMTLVESSPGREITDTRWKPSSPHEAPPTTGILSLYNRGDRRRWYWPCPHCGEYFQPSMANMTGYRHIADPMEASEAARIQCPHCHKLTEPQQKRELNNRGVWLREGQHIDRDGNITGEARRSRIASFWMEGPAAAYQTWAQLVYKLLTAEEEYERTGSEETLKAVINTDWGLPYQSRRSLEARSGDALMARAEDVSKRTVSDGVRFIVATVDVQGGKKRRFVVQVVGYGAYGERWIIDRYNIRYSLRVNEDGESQPVNPAARPEDWDLLKTDVLEKTYPLAADPEQFMPVLAMAVDSGGEDGVTDNAYAFWRRCKRKGVAGRVYLFKGDSTRREKLITKTYPDNTERSERRAKARGDVPLYLLQTNALKDRVAAALEREEPGANYIHFPDWLGPWFYEELTYEERSADGKWKKPGRGNNEALDLMCYAHALAILRGYERINWEKPPGWARLPEKDAAKTTQPVEVRQQEQHEGGEKAVKARKKKILPAWGGGSGGGWL
334641..334847                     PHAGE_Phage_Gifsy_2_NC_010393: conserved hypothetical bacteriophage protein; STU288_01495; phage(gi169257300)     1.19e-41            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MTRAGLQELYNAYLEAELAVLKGKSIMLNGQSMTMESLEEIRKGRREIEDRLQRLNNPRRLFTRARLS
334844..336391                     PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage portal protein; STU288_01500; phage(gi169257301)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrU288MNFIDKAISMMSPGWAVSRLRSRAVIKAYEAAIPTRTHKIKRENRNANQLNQIAGKSLREQARWFDNNHDLVVGALDKMEERVIGAKGIIVEPQPLTVAGTLNNALAEQIRARWAEWSVSPDVTGQYTRPVLERLLLRTWLRDGEVFSQMVAGKMPGLEPVAGVPFWLEAMEPDYVPMEQTDSTNNLIQGIYFNDWQRPKSYIVCKSWPGFATAMVATKLIDAENMLHLKFTRRLNQARGVTLLAPVIIRLLDLKEYEDSERLAARISAAFAMFIRRSDAMVQDGDAPDYADKDRDLDIEPGTILKDLLPGEDIGTIKSDRPNANLESFRMGQLRAVAAGVRGSFSSIARNYDGTYSAQRQELVEAQEGYAILQDNFIAAVSRPVYRRWLATAITAGVIDVPTDTDMATLFNAVYSGPVMPWIDPLKEANAWRILIRGGAATESDWVRARGGAPAEVKRRRKAEIDENRKLGLVFDTDPAHDPGEQDNAGSEDNSGGDKNAAGDDSRERTRGGKQ
336342..338396                     PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage Clp protease involved in capsid processing; STU288_01505; phage(gi169257302)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrU288MPPVMTAGNGRGEGSSNSWYSIRAAANNTAEVRIYDEIGGWGISARWFAEELAALGQINRINLHIHSPGGAVLDGIAIYNLLKNHPAQKTVYIDGMACSMASAIAMVGNPIIMPENAMMMIHKPRGVAGGEAEDIREYADLLDKIESVIIPIYTEKTGKTPEDIAAMLAKETWMSGAECVSEGFADKLIQPVKAMACIHSKRVEEFEHMPQSIKGMIIAPQGNAGAQPQPQAKAPESQIQSQAQSLVTVDENAIRARLQEEQRNRITGIQNVFSLSGDRYASLMAKCIADVDCSLEMAKDRLLAEMAKGITPTNQLNGPQNRAEFHAGMYTGNGNITGDAVRAAVMARAGYEEAQKDNPYNCMTLRELARISLVARGTGVSSMNPMQMIGMAFTHSTSDFGNILLDVANKSILQGWQEAPETFDAWTKKGQLSDFRIAHRVGMGGFSSLRQVREGAEYKYVTTGDKQATIALATYGELFSITRQAIINDDMNMLTDVPMKLGRAAKATIADLVYDVLISNQKLSSDNVALFDKTKHANVLEKAVMDVASLDKARQLMRMQKEGDRHLNIRPAFVLVPTAMESVSNQVIKSVSVKGADINAGIINPVKDFATVIAEPRLDDASQSTFYLTAAKGSDTVEVAYLNGVDEPYIDQQEGFTVDGVTTKVRIDAGVAPVDYRGMVKCTV
338487..338810                     PHAGE_Phage_Gifsy_2_NC_010393: conserved hypothetical bacteriophage protein; STU288_01510; phage(gi169257303)     7.08e-70            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MAKNYVEDGKTIEIVATTSLKSGDLVQVGDMFAVAVTDIAAGSAGTGIAEGVFSIPKLTTEDIAVGKKVYLKDNVVQTDATGSLPYVGVVWAPAANGDETVPVKING
338803..339102                     PHAGE_Phage_Gifsy_2_NC_010393: conserved hypothetical bacteriophage protein; STU288_01515; phage(gi169257304)     2.90e-65            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MADLFDGMKRRMDALIAERFGMKVNINGTDCIVVESDFLAELGPVEGNGKNVVVFSGNVIPRRGDRVVLRGSEFTVTRIRRFNGKPQLTLEENNGGKGA
339083..339649                     PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage morphogenesis protein; Lambda gpZ homolog; STU288_01520; phage(gi169257305)     1.31e-134           SalmonellaentericasubspentericaserovarTyphimuriumstrU288MEVKGLKEAISVLKELDRGYVTRAKIRAINRVAKRVVSVSVRSAAALVVAGDNRRQGIPVRTVRRRARVRLARADKPFANIYVNCDPLTAIRLLSSPPSTPMRGRKGKPLRIGKYRFDRGFIAQAPNGWWQVFERSGAGRYPLNVVKIPVADALRHAFNTQVVLQMKTEMPKELKHEISYELRRFTKK
339646..340047                     PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail shaft stabilization protein; Lambda gpU homolog; STU288_01525; phage(gi169257306)     5.47e-94            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MTRHSAVRQAIIAALKKTDDGSTTFFDGRPVVVEEDELPAVAVYLSDAQYTGPEVDGDIWSAVLHVEVFLKATAPDSALDEQMENRVYPALGSVAGLGDIIRTMSAQGYNYQRDDEMAMWGSADLSYDITYSM
340059..340808                     PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage major tail protein; Lambda gpV homolog; STU288_01530; phage(gi169257307)     1.44e-179           SalmonellaentericasubspentericaserovarTyphimuriumstrU288MTDTTIPNPLAPVKGANTTFWMYNSEGDPFASPLSDNNWLRLANVKDLQPGELTADAEDNNYLDDENADWKSTTQGQKSAGDTSVTLAWKPGEDVQKKLIQLFTTGQKRGFRIKYPNGTVDVFRGWVSSLGKTVQSKDEIARTVKITSVGRPYMAEEDAPEVVSVTGLTVEPTNATVKVGATTAVTFTVKPDNVTDKSLRIATSDPTTATVTQAENIATVKGVKAGTVKIIGMTTDGNFTAIADITVQA
340854..341252                     PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail assembly chaperone; Lambda gpG homolog; STU288_01535; phage(gi169257308)     9.72e-92            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MFLKKETFTRGDASVALFELSGLQRIEYLEFIQKRTAKYDTDMDGTTEADKRVAYMQMALEINAWLVSRSLLNGDSSQDADTLYQSVQAKWSYEALDAGAESVLMLSGLSADKKDNASDSGNESEDMTPEKS
341315..341578                     PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail assembly chapterone - part of G+G' frameshift hybrid protein; Lambda gpT homolog; STU288_01540; phage(gi169257309)     7.33e-56            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MLDEMSSTELSEWADFFRENSFSDALLDAEFSTLKAQVFMLVTGKEIDAADFSLLTLPGAVQSMTEQDLLEVAVGIPGGVRFEPESR
341559..344645                     PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail tape measure protein; minor tail protein; Lambda gpH homolog; STU288_01545; phage(gi169257310)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrU288MSQKVGDIVINMDVDTAKVAAGLQTASNGLGKLVDSSDLVEKRIKRCMESSARSVAASAKSISAAMAQSQVATRTQSDAMAQLAREANEARERAVDLNQKLRAEAAQAAVVAQAQDAAAAAFYRQIDSVKQLSGGLQELQRIQAQVRQAKGRGDISQGDYLALVSEAAAKTRELTDAEALATQKKAQFIRRLKEQTAVQGLSRTELLRVKAAELGVSSAADVYIRKLDTATKSTHALGLKSAMARREIGVLIGELARGNFGALRGSGITLANRAGWIEQLMSPKGMMLGGLVGGVAAAVYGLGKAYYEGAKESEEFNKQLILTGSYAGKTTGKLNEMAKSLAGNGVTQHDAAGVLTQVVGSGAFTGQAVAMVSRTAARMQENVGQSVDETIRQFKRLQDDPVNAAKELDRALHFLTATQLEQIRVLGEQGRTADAAKIAMSAYSEEMNKRAGDVHDNLGWIEKAWNAVGDAAKWAWDRMLDIGREDTLDEKIATLQEKIARARKTPWTVSSSQTEYDQQQLNELQEQKRQKDLLDAKAQAERNYQKTQKRRNEQNAALNRDNETESLRHQREVARITAMQYADAAVRNAALERENERHKKAMARQKEKPKAYYNDEAGRLLLQYSQQQAQTEGLIAAAKLSTTEKMTEAHKQLLSFQQRIADLSGKKLTADEQSVLAHKDEIALALQKLDISQQDLQHQNAFNELKKKTLTLTSQLADEESRVRQQHALALATMGMGDQQRGRYEEHLKIQQHYQEQLEQLKRDSKAKGTYGSDEYRQAEQELQASLDRRLAEWADYNAKVDAAQGDWTQGASRALDNFLAQGGNVAGMTENVFTNAFNGMADSIANFAVTGKGSFRSLTVSILADLAKMEARIAASKLLGSVLGMFVFGASAGGSTPSGAYSSAALSVIPNADGGVYRSAGLSQYSGSIVNRPTFFAFARGAAVMGEAGPEAILPLRRGTDGKLGVVAAGSGGMAMFAPQYHIAISNTGPELTPQALKAVYDLGKKAAADFVQQQGRDGGRLSGAYR
344645..344974                     PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail tip assembly protein; Lambda gpM homolog; STU288_01550; phage(gi169257311)     1.41e-77            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MKTFHWKVDPDMGVDSEPQVSVVRFGDGYEQRRASGINNDLKKYSVTIRVDREDGPGLEGFLSQHNGVKAFLWTPPYGYRQIKVVCRKWSVKAGLLKTTFTATFEQVIS
345073..345570                     PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage virulence determinant; Lom homolog; STU288_01555; phage(gi169257312)     2.52e-113           SalmonellaentericasubspentericaserovarTyphimuriumstrU288MKKIVVAVLVGLALGSIGVANAAGYKNTVSIGYAYTDLSGWLSGNANGANIKYNWEDLDSGFGAMGSVTYTSADVNNYGYKVGDADYTSLLVGPSYRFNDYLNAYVMIGAANGHIKDNWGNSDNKTAFAYGAGIQLNPVENIAVNASYEHTSFSTDADSDVKAGT
complement(345687..346220)         PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage virulence determinant; superoxide dismutase precursor; STU288_01560; phage(gi169257313)     5.18e-125           SalmonellaentericasubspentericaserovarTyphimuriumstrU288MKYTILSLVAGALISCSAMAENTLTVKMNDALSSGTGENIGEITVSETPYGLLFTPHLNGLTPGIHGFHVHTNPSCMPGMKDGKEVPALMAGGHLDPEKTGKHLGPYNDKGHLGDLPGLVVNADGTATYPLLAPRLKSLSELKGHSLMIHKGGDNYSDKPAPLGGGGARFACGVIEK
346310..347005                     PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail tip assembly protein; Lambda gpL homolog; STU288_01565; phage(gi169257314)     6.83e-174           SalmonellaentericasubspentericaserovarTyphimuriumstrU288MQDIPQETLSETTKAEQSAKVDLWEFDLTAIGGERFFFCNEPNEKGEPLTWQGRQYEPYPIQVQDFEMNGKGASPRPNLVVANLFGLVTGMAEDLQSLVGASVVRHQVYSKFLDAVNFSNGNPDADPEQEAVARYNVEQLSELDSSTATIILASPAETDGSVVPGRTMLADSCPWDYRDENCGYDGPPVADEFDKPTSDPKKDKCSHCMKGCEMRNNLVNAGFFASINKLS
347015..347752                     PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail tip assembly protein; Lambda gpK homolog; STU288_01570; phage(gi169257315)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrU288MINDDILAHARQCAPAESCGYVVRTAQGERYFPCENLSAEPTMYFRISPEDYLNARNRGDIVALVHSHPDGKPCLSSADRTLQIQSGLDWWLVCDNRIHKFRCVPHLTGRQFEHGVTDCYTLFRDAYHLAGIDMPDFDREDDWWSQGKSLYLDHLEAAGFYRVNPEDAQPGDVLICCFGSPTPNHAAIYCGNGELLHHIPEQLSKREGYNDKWQRRTHSIWRHRQWCESAFTGIYNDLESASASA
347812..348354                     PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail tip assembly protein; Lambda gpI homolog; STU288_01575; phage(gi169257316)     3.15e-127           SalmonellaentericasubspentericaserovarTyphimuriumstrU288MNEGWYQVRIAGSDMAPDTLTARLNESLPPGAVVHIVPRMAGAKNGIWQVVAGAALIGASFIPGLNAVAAAVLFSAGTSMALGGVAQMLTPVPKTPTVGQADNGKQNTYFSSLENMVAQGNPVPVLYGEMKIGSRVISQMMSTRDESTSGKVVVIGSPLQANTTSRQDGGITRPSVVIRQ
348426..350873                     PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail fiber (host specificity) protein; Lambda gp J homolog; STU288_01580; phage(gi169257317)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrU288MSKGGGKGHTPREAKDDLKSTQQLSVIDALSEGPIVGPVNGLQSVLINNTPVVDADGNSNIHGVTVVYQVGETPQAPLEGFEASGAETVLGVEVKHDNPVTRTVVSENVDRLRFTFGVQMLQETTDKGDRNPSSVNLLIQFQRSGIWNTEFDITINGKITTQYLASVVADNLPPRPFSVRMVRVTPDSTTDRLQNKTLWSSYTEIIDIRQGYPGTAVAGLLVDAEQFGSQQVTRNYHLRGRIFQVPSNYDPDTRTYTGLWDGAFKPAYTNNPAWCTMDKLTHPRYGLGRRIGGADVDKWALYAIAQYCDQPVPDGFGGTEPRMTLNAYITTQRKAYDVLADFCSVMRCMPVWNGRKMTFIQDRPSDKAWTYTNGNVVGGRFKYSFSALKDRHNAVEVRYTDPLNGWQTSTELVEDHASQARYGRNLLKMDAFGCTSRGQAHRTGLWVMMTELLETQTVDFSVGAEGLRHTPGDIIEVCDNDYAGASVGGRITDLDISTRTLTLDREITLPESGATTLNIVGPDGKPFSTEIQSQPAPDRVVTKVLPETVQPYSIWGLKLPSLKRRLFRCVRIKENDDGTYAITALQHVPEKESIVDNGAHFDPLPGTTNSIIPPAVQHLTVSTDNDSTLYQAKAKWGTPRVVKDVRFVVRLTTGSGNEGDPVRLVTTATTSETEYAFHELPLGDYTLTVRAINGYGQQGEPASVAFSIQAPEAPSTIEMTPGYFQITVTPHQTVYDASVQYEFWYSATQLATAADIQSKAQYLGVGSFWIKDGLKPLHDAWFYVRSVNLAGKSVFAEASGRPGMTRKGIWIFLRD
350900..351775                     PHAGE_Phage_Gifsy_2_NC_010393: pseudogene; bacteriophage tail fiber C-terminus (Host specificity); Lambda gpJ homolog; STU288_01585; phage(gi169257318)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrU288MLKKIDLTENNASKLQQFSKEWQDANDKWSATWGVKIEQTKDGKYYVAGLGLSMEDTPDGKISQFLVAADRIAYINPANGNETPGFVMQGDQIIMNEAFLKYLSAPTITSGGNPPAFSLTPDGKLTAKNADISGHINAVSGSFTGEINATSGKFSGVIEAREFVGDICGSKVMQGVSIRATNDERSTSTRYTDSATYQIGKTITVMANCERNGGSGAITVTININGQVKTAEVMPYTAGIPAMYQTVVFSVYTTSPVVDISVSLRVRGQYTTSASVWPLVMVSRSGSNFTN
351814..352056                     PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; STU288_01590; phage(gi169257319)     6.58e-54            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MTMSRVISLAAGLSLSVLFSTAAVADNGRGSGNSNIENQTRIYTGTDRGQKQHREAKGKTITRSVQCSLPAYLRDPDNQC
352110..354548                     PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage side tail fiber protein; Lambda gpStf (gpN) homolog; STU288_01595; phage(gi169257320)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrU288MPVLISGVLKDGTGTPVQNCTIQLKACRTSTTVVVNTVASENPDDAGRYSMDVEQGQYTVTLLVDGYPPSHAGVITVYDDSKPGTLNDFLGAMTEDDVRPEALRRFEAMVEEVARQASEASRNATAAGQASEQAQTSAGQASESATAAVNAAGAAEASATQAASSAASAESSAGTATTKAGEASASAASADTARTAAAASAAAAKTSEANADASRTAAGDSAAAAAASATAAQTSAERAGASETAAKTSETQAASSAGDAGASATAAAASEKAAAASAAAAKTSETNAATSASTAAASATAASSSASEASTHAAASDTSASLAAQSSTAAGAAATRAEDAAKRAEDIADVISLEDASLTKKGIVKLSSATDSDSEALAATPKAVHAVMDEVQTKAPLDSPALTGTPTAPTPETAAAGIEIATAAFVAAKVAQLVGSAPETLDTLKELADALGNDPNFATTVLNKLAGKQPLDDTLTALSGKSVDGLIEYVGLRETINHAADALLKSQNGGDIPEKPLFVQNIGALPASGTAVAANRLASRGALPALTGATRGSDSGLIMGEVYNNGYPTQYGNILRLTGTGDGEILIGWSGTNGAPAPAYIRSHRDTADAEWSEWAMLYTSLNPPPNSYPVGAAIAWPSDATPAGYALMQGQSFDKSAYPLLAIAYPSGIIPDMRGWTIKGKPISGRAVLSQEMDGNKSHSHSARAQDTDLGTKSTSSFDYGTKSTNTTGNHTHQFGGYINSYWGDSNHTSFQPGGGAWTQAAGDHAHTVYIGGHEHTMYIGPHGHVVIVDADGNAETTVKNIAFNYIVRLA
354548..355129                     PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage side tail fiber assembly protein; Lambda gpTfa analog; STU288_01600; phage(gi169257321)     7.23e-143           SalmonellaentericasubspentericaserovarTyphimuriumstrU288MTFKMSEQAQTIKIFNLRSDTNEFIGAGDAYIPPHTGLPANCTDIAPPDIPASHIAIFDAETQTWSLHEDHRGEMVYDTTTGNQVYISAPGPLPENVTSVSPGGEYQKWDGKAKVWVKDEAAEKAAQLRQAEETKSRLLQMASEKIAPLQDAVDLGIATDDEKARLDEWKKYRVLVNRMDTAAPDWPERPASQ
355605..356573                     PHAGE_Phage_Gifsy_2_NC_010393: prophage virulence determinant; secreted effector protein; STU288_01605; phage(gi169257322)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrU288MPFHIGSGCLPAIISNRRIYRIAWSDTPPEMSSWEKMKEFFCSTHQAEALECIWTICHPPAGTTREDVVSRFELLRTLAYDGWEENIHSGLHGENYFCILDEDSQEILSVTLDDVGNYTVNCQGYSETHHLTMATEPGVERTDITYNLTSDIDAAAYLEELKQNPIINNKIMNPVGQCESLMTPVSNFMNEKGFDNIRYRGIFIWDKPTEEIPTNHFAVVGNKEGKDYVFDVSAHQFENRGMSNLNGPLILSADEWVCKYRMATRRKLIYYTDFSNSSIAANAYDALPRELESESMAGKVFVTSPRWFNTFKKQKYSLIGKM
356841..357089                     PHAGE_Stx2_c_1717_NC_011357: transposase; STU288_01610; phage(gi209447153)           1.74e-31            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MEIDNNICENALRCVALGRRNYLFFGSDSSGEAAAIIYSLLGTCKLNDVESEAWLRDVLWKISDWSSNRVHELLPWNLETVK
complement(357221..357847)         PHAGE_Pseudo_F116_NC_006552: hypothetical protein; STU288_01615; phage(gi56692976)     3.20e-36            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MCGRFAQAQTREEYLAYLADEADRNIAYDPQPIGRYNVAPGTKVLLLSERDEQLHLDPVIWGYAPGWWDKAPLINARVATAASSRMFKPLWQHGRAICFADRWFEWKKEGDKKQPYFIHRKDGKPIFMAAIGSTPFERGDEAEGFLIVTSAADKGLVDIHDRRPLALTPETARVWMRQFLEPHSKSITYRVIPALTRPMMRKDTNPCQ
357876..357887                     attR                                                                                 N/A                 TATAGGGCAGGG
complement(358200..358886)         gifsy-2 prophage protein; STU288_01620                                               N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrU288MLRHIQNSLGSVYRSNTATPQGQIIHHRNFQSQFDTTGNTLYNNCWVCSLNVIKSRDGNNYSALEDITSDNQAFNNILEGIDIIECENLLKEMNVQKIPESSLFTNIKEALQAEVFNSTVEDDFESFISYELQNHGPLMLIRPSLGSECLHAECIVGYDSEVKKVLIYDSMNTSPEWQSNIDVYDKLTLAFNDKYKNEDCSICGLYYDGVYEPKPLHSSSWKDWCTIL
complement(359157..359348)         PHAGE_Entero_mEp390_NC_019721: DinI-like family protein; STU288_01625; phage(gi428782688)     5.05e-34            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MFVELVYDKRNVEGLEGASEIILAELTKQVHQIFPDAEVRVKPMQANCLNSDTNKSDRENLNR

#### region 2 ####
1172591..1172959                   PHAGE_Entero_HK022_NC_002166: integrase; STU288_05685; phage(gi9634144)              5.40e-24            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MKIALPLSLNLPSMGLRLSTVIERCRLVSRSEYLISAGIRKNSPNGSIHPNSLTKKFVAARKLTGINFSENPPPFHEIRSLSGRLYKDAYGEGFAQKLLGHTSENTTKLYLDERDNKAYVML
1173094..1173116                   attL                                                                                 N/A                 AAAAAGAGACCGAATACGATTCC
complement(1173445..1173663)       hypothetical protein; STU288_05690                                                   N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrU288MATLREMLSPRYTTRYEDLLQVKWQVYPDFHIPDVMEPQPHRMQERAAASWRSFDSASIEWLPVAADFTCSR
1174263..1175177                   drug/metabolite transporter permease; STU288_05695                                   N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrU288MRKVSISILFMLVSLTWGTTWLAMRIAVETIPPVFATGMRFMFAAPFLIIIAWLRKKTLLFPPGQRLFQFVICIFYFCIPFSLMIYGETYVNSGLAAIIFANMPVAVLIASVLFLNEKAKLMQIAGLTIAITALTGILLEETNTSTESHWQGITALISAVLIHAIIYTQCKKRSCTVSVITFNALPCLLAGLILSATGWFFERPQVSTFSVHSILATLYLGAFAGVFGILCYFALQQKANAFQASLVFLIFPLIAVSLEDYIYGYAISTHSMLLIIPLVIGIFLTLVARNLPVTSRCRDNSSQK
1175310..1175468                   hypothetical protein; STU288_05700                                                   N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrU288MFMFLPFLLALSVAMGAINRKDKVSYILWAVLLIVTILSFIHHMTNSLTLSF
1175478..1176092                   hypothetical protein; STU288_05705                                                   N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrU288MKTHHHPTTFVHLINQVGLLGICVALVVAFYYQLVRHELPCPICLLQRAGLIIAGFGFLFNLCFGLRGIHYGMVIIGSILTGVMASRQICLHIMPGDTGYGSAFFGLHFYTWTLITSILIIIAVAVILAISSMNVAFRSLNINPDLFSIVGWVFLLLITANLISTVLECGGGECAANPVTYKLLSKQDIAFLKTGLLTRTVLRL
complement(1177240..1177365)       arsenical pump membrane protein; STU288_05710                                        N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrU288MFANADSELILTPIIIAVLLAPGFSKSTTLAILHFFFRREK
1177264..1177422                   hypothetical protein; STU288_05715                                                   N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrU288MQYSQRGAFAETRREQHGNDDRRQNEFGIGIGKQGAQSLIPTSSSAKSATMS
1177628..1177744                   PHAGE_Salmon_SEN34_NC_028699: putative tail assembly chaperone; STU288_05720; phage(gi966201445)     2.58e-06            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MWLAYKNEVKLIDITNTPDNVNWPVPPGERASHDLKST
complement(1178232..1179113)       PHAGE_Salmon_Fels_1_NC_010391: putative bacteriophage tail assembly protein; STU288_05725; phage(gi169257205)     8.93e-90            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MYIGPHGHVVIVDADGNAETFGLMDGGVDAAITAYFGSQLQERVQQNIIREYLGEQPVGTAFVIETGNSKHPWLVPAPTMRVPLIIDGTDAVYNATRAALLAIFQHNKSAGEDRKITSVALPAMGAGCGQVPPGQRRPANCTDIAPPDIPSSHIAVFDAETQTWSLQEDHRGETVYDTTTGNQVYISDLGPLPENVTSVSPGGGYKKWDSKAQVWMNDEAAEAAARLREAEGTKNRLLQIASEKIAPLQDAVDLDEATNKEKASLLAWRKYRVQVNRVDTLKPVWPEKPASSL
complement(1179268..1179531)       PHAGE_Salmon_Fels_1_NC_010391: bacteriophage terminase, small subunit; STU288_05730; phage(gi169257184)     8.76e-57            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MDGELKNLKCNISQLAAITGLHRQTVVSRLSGVPLALGSNEKNKLYLLTDVIRVLMETPVSQAAEHQDPNKMTPKERKNWFDSEKGR
1179839..1180006                   hypothetical protein; STU288_05735                                                   N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrU288MKNIITIIVAIIIVFYAGMWSQKFLMEDECLDSGGSYNENGICNIAGSHQDVPPK
complement(1180263..1180796)       PROPHAGE_Salmon_LT2: phage-tail assembly-like protein; STU288_05740; phage(gi16765210)     1.20e-124           SalmonellaentericasubspentericaserovarTyphimuriumstrU288MNLLSALLKRYWLQLVFILLMAGAFIAGNVWSDRGWQKKWADRDSAESSQEVNAQTAARIIEQGRVIARDEAVKDAQAQAAKSAATAAGLSATVSQLRTEAKKLATRLDAAKHTANLAAAVRSKTTNADARMLANMLGDIAEAAKHYAGIADERYRAGMTCERVYDSVRESNNYRRH
complement(1180850..1181080)       PHAGE_Salmon_Fels_1_NC_010391: putative bacteriophage endolysin; STU288_05745; phage(gi169257182)     4.51e-38            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MNGKKAFAPRSAKIRITGLENYTRCGVALKLDLVANPGQLELERHAARSAAWLFVTKGCLKYSGDLVRVTQIINGG
1181111..1181764                   PHAGE_Shigel_Stx_NC_029120: exodeoxyribonuclease VIII; STU288_05750; phage(gi985761253)     5.65e-27            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MPDNTPTTHEENAARLSQAGKCLRDIEAGRFQCDEEKQQPTGELADEPATPEAVEQDTTEHHPDPQPLENEPPVSQTEAGYQKIRAELHEARKNIPPKNPVDVGKQLAAARGEYVEDISDPNDPRWVHNNYSASNQGEKEEVVPEGKQPAAEPEAVTRNADGTFDVSALFLPPSNQTEKTEARTERDGETPKESNQQETAGDTGQEITTDGGSGTTS
1182310..1182678                   PHAGE_Entero_HK022_NC_002166: integrase; STU288_05755; phage(gi9634144)              2.79e-26            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MKIAIPLSLTLRATGLRLGTVIDRCRLVSRTDFMISAGIRKNSPTGNIHPDGLTKTFVKARKASGVNFSNNPPTFHEIRSLAGRLYKNEHGEVFAQKLLGHTSENTTKLYLDERDNKAYVML
1182809..1182831                   attR                                                                                 N/A                 AAAAAGAGACCGAATACGATTCC
complement(1183052..1183405)       PHAGE_Salmon_SEN1_NC_029003: hypothetical protein; STU288_05760; phage(gi971764937)     8.26e-12            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MKKILLPALLLATSGVALAAPQVITVSRFEVGKDKWAFNREEVMLTCRPGQALYVINPSTLVQYPLNAIAEQQVAEGKTRAQPIAVIQIDNPAKPGEKMSLAPFIERAQKLCDPSNS
complement(1183422..1184294)       cation transporter; STU288_05765                                                     N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrU288MLTFVWITLRFIHFASVMLVYGCALYGAWLAPASIRRLMTRRFLHLQQHAAAWSVISAAFMLAVQGGLMGGGWPDVFFVSVWGAVLQTRFGAVWIWQIILALVTLAVVVIAPVKMQRRLLILTVAQFILLAGVGHATMRDGVAGTLQQINHALHLLCAAAWFGGLLPVVYCMRMAQGRWRQHAISAMMRFSRYGHFFVAGVLLTGIGNTLFITGFTAIWQTTYGQLLLLKCALVVLMVAIALTNRYVLVPRMRQENPRTDLWFVRMTQIEWGVGGIVLAIVSLFATLEPF
complement(1184298..1184672)       hypothetical protein; STU288_05770                                                   N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrU288MASSAPSRRLALLLLASTFATPAAWAHAHLTHQYPAANAAVTASPQALTLNFSEGIEPGFSGATITGPQQELIKTRPAKRNEQDKTQLIIPLEQPLKSGAYTVDWHVVSVDGHKTKGKYTFSVK
1184810..1185040                   PHAGE_Pectob_ZF40_NC_019522: putative DNA polymerase; STU288_05775; phage(gi422936677)     7.33e-23            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MKTNLAQLEQAEMDKVNVDLAAAGVAFKERYNMPVVAEAVEREQPEHLRAWFRERLIAHRLASVSLSRLPYEPKVK
1185148..1185804                   carbon-nitrogen family hydrolase; STU288_05780                                       N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrU288MSSWKIAAAQYAPLNASPAEHVAHHLEYIELAARQQCELLVFPSLSLLGCDERNKSLPAPPDEALLQPLTHAADTHHMTIIVGMPVEHNCRFVKGIAIFAPWLTSPLMFHKSHGACIARQRSAINVVDEQPEGGDIDPSFTLFTTSQCLNEPELHASTSRLQRFSHKYALAVLMANACGSSALWNESGQLIVRADCGSLLLTGLRTTEGWQGDIIPLR
1185828..1186526                   PHAGE_Pseudo_H101_NC_029094: exodeoxyribonuclease X; STU288_05785; phage(gi985760125)     7.36e-19            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MLRIIDTETCGLQGGIVEIASVDVIDGNIVNPMSHLIRPDRPITPQAMAIHRITEAMVADKPWIEDVIPLYYGSEWYVAHNASFDRRVLPELPGEWICTMKLSRRLWPGIKYSNMALYKSRKLSVQTPPGLHHHRALYDCYITAALLIDIMRTTGWTAEEMVNITGRPALLTTFPFGKYRGKAVSEVAKRDPGYLRWLFNNLDNMSPELRLTLKHYLEDVQAGEQRSNGTPQ

#### region 3 ####
1934341..1934353                   attL                                                                                 N/A                 GCGCCAGAAAAGA
1942304..1943200                   PHAGE_Phage_Gifsy_1_NC_010392: leucine-rich repeat protein; STU288_09280; phage(gi169257209)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrU288MLPEELKELSIELIRTVPGTVIDDILPDKLKKLSINFCDNIKLPVKLPVNLKSINLSSRTPIAWEIPTCNLPAHIDISTDGYVKLNPEFLTRSDITFSNKPAGDVLSFQPGDVVYGLCKARDRVNTLVNSLYYFSKKDIIIQNTLTDAVWDRKNRAVFNKDEKIAERLNDVQRGIFFREFLSQHKKYNITEDKYSDLSNEECWIKTSKAGLEFQTRLRERSVIFVIDNLVDAISDIANKTGKHGNSITAHELRWVYRNRHDDLVKQNVKFFLNGEAISHEDVFSLVGWDKYKPKNRNR
complement(1943404..1943532)       hypothetical protein; STU288_09285                                                   N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrU288MSENLIKEKIISIDIFLFLQVFNACPNKRAQMVKNLVGHKKV
complement(1944529..1944693)       PROPHAGE_Xantho_33913: ISxcd1 transposase; STU288_09290; phage(gi21231544)           4.28e-07            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MAIDQITQSGLSSIKVIYYSAQLFITLCFIHPGKPLQNACIERYNRTVGYDWLG
complement(1945401..1945613)       PHAGE_Salmon_SJ46_NC_031129: hypothetical protein; STU288_09295; phage(gi100036)     2.69e-08            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MISAIIFSFQCKLIHMRVSSCAIQILTGSHPLGAQAGRLIRAGVPRQQVTIIYDAGLSTLYRKFPVSKLA
complement(1946044..1946622)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage side tail fiber assembly factor & structural component; Lambda gpTfa homolog; STU288_09300; phage(gi169257212)     4.99e-141           SalmonellaentericasubspentericaserovarTyphimuriumstrU288MTFKMSDTPQTIKIFNLRSDTNEFIGAGDAYIPPHTGLPANCTDIAPPDIPASHIAIFDAETGTWSLHEDHRGETVYDTTTGNQVYISAPGPLPENVTSVSPDGEYQKWDGKAWVKDEAAETAARLREAEGTKSRLLQMASEKIAPLQDAVDLDEATDKEKASLLAWRKYRVQVNRVDTLKPVWPEKPASSL
complement(1946612..1947436)       PHAGE_Phage_Gifsy_1_NC_010392: conserved hypothetical protein; contains pfam01661, Macro, Macro domain; STU288_09305; phage(gi169257213)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrU288MIKLILSAPVPAMAVAFEHSFQNTENVEIIPGPFETIPEFDCMVSAANSFGLMDGGVDAAITAYFGPQLQERVQQHILREYLGEQPVGTAFVIETGNSKYPWLVHAPTMRVPLIIDGTDAVYNATRAALLAIFQHNKSAGEDRKIKSVVFPAMGAGCGQVSPGSVARQMKLAWDGFINCTTEINWQYASARQNAVFSTTAYCPSKALCPNARTEYIGFGDYRTYCKKSGNTCISPRHQVDDIYIGAHSHAVFLSPNSHGKHLKPEYLSGVKNDV
complement(1947433..1949805)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage side tail fiber protein; Lambda gpSft (gpN) homolog; STU288_09310; phage(gi169257214)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrU288MPVLISGVLKDGTGTPVQNCTIQLKACRTSTTVVVNTVASENPDDAGRYSMDVEQGQYTVTLLVEGYPPSHAGVITVYDDSKPGTLNDFLGAMTEDDVRPEALRRFEAMVEEVARQASEASRNATAAGQASEQAQTSAGQAAESATAAVNAAGAAEASATQAASSAASAESSAGTATTKAGEASASAASADTARTAAAASAAAAKTSEANADVSRTAAGDSAAAAAASATAAQTSAARAGASETAAKTSETQAASSAGDAGASATAAAASEKAAAASAAAAKISETNAATSASTAAASATAASSSASEASNHAAASDTSASLAAQSSTAAGAAATRAEDAAKRAEDIADVISLEDASLTKKGIVKLSSATDSDSEALAATPKAVHAVMDEVQTKAPLDSPVFTGTPTTPTPPDDAKGLQTANAEFVRKLIAALVGSVPESLDTLQELADALGNDPNFATTITNMIAGKQPLDDTLTALSGKSIEGLIEYVGLRSTIDKAAGALPAGGTAVAANRLASRGALPALTGTTRGSDGGLIMGEVYNNGYPTQYGNILRLTGTGDGEILIGWSGTNGAPAPAYIRSHRDTADAEWSEWAMLYTTLNPPPDSHPVGAAIAWPSDATPAGYALMQGQSFDKSAYPLLAIAYPSGVIPDMRGWTIKGKPISGRAVLSQEMDGNKSHSHTARAQDTDLGTKSTSSFDYGTKSTNTTGNHTHQFGGYINSYWGDSNHTSFQPGGGAWTQAAGDHAHTVYIGGHEHTMYIGPHGHVVIVDADGNAETTVKNIAFNYIVRLA
complement(1949859..1950101)       PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; STU288_09315; phage(gi169257215)     1.13e-53            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MTMSRVISLAAGVSLSVLFSTAAVADNGRGSGNSNIENQTRIYTGTDRGQKQHREAKGQIITRSVQCSLPAYLRDPDNQC
complement(1950140..1953502)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage host specificity protein; tail fiber; Lambda gpJ homolog; STU288_09320; phage(gi169257216)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrU288MGKGGGKGHTPREAPDNLKSTQLLSVIDAISEGPIEGPVNGLQSVLVNQTPVVDRDGNTNIHGVKVVYRVGEQEQTPLEGFESSGAETVLGVQVKYDNPVTRTITAANIDRLRFTFGVQSLVEANSKGDRNPTSVRLQIHLERYGQWVVEKEITITGKTTTQYLASVIVDNLPPRPFGIRMVRVTADSTTDQLQNNTVWSSYTEIIDVRQRYPNTAVIGLQVESEQFGSQQVTRNYHFFGRIIHVPSNYDPVARTYSGIWDGTFKPAYSNNPAWCLWDVLTHPRYGMGQRIGAADVDRWALYAIGQYCDQMVPDGFGGTEPRMTFNAYLAQQRKAWDVLTDFCSAMRCMPVWNGQMMTFVQDRPSDTVWTYTRSNVVMPDEGTPFRYSFSARKDRHNAVEVNWIDPDNGWQTSTELVEDTVAISHYGRNLVKMDAFGCTSRGQAHRAGLWLIKTELLETQTVDFSVGAEGLRHVPGDVIEVCDEDYAGISLGGRILSVDRARRILTLDREITLPSSGTTLISLMDGEGLPVSVDVQSVTDGVQVQVSRIPDGVAEYSVWGLKLPSLRQRLFRCVAVRENDDGTYAITAVQHVPEKESIVDNGASFDPQPGTIHGTVPPAIQHLTTEILAEEGQYQVLARWDTPRVVKGASFSLRLNVAAEDGSDRLVSSAGTPDTQYRFRGLTPGRYTLSVRAVNSQGQQGDPASTQFSISAPAAPSFIELTPGYFQITATPRQAVYDPTVQYEFWFSDAQITDIHQVENAARYLGTALYWIAASVNIRPGRDYYFYIRAVNQVGKSAFVEATGQASNDAAGYLDFFKGQITESHLGKELLEKVELTEDNASKLQQFSKEWQDANDKWNAMWGVKIEQTKDGKYYVAGLGLSMEDMPDGKISQFLVAADRIAYINPANGNETPGFVMQGDQIIMNEAFLKYLSAPTITSGGNPPAFSLTPDGKLTAKNADISGHINAVSGSFTGEINATSGKFSGVIEAREFVGDICGSKVMQGVSIRETNDERSTSTRYTDSATYQIGKTITVMANCERNGGSGAITVTININGQVKTAEVIPYTAGLPAMYQTVVFSVYTTSPVVDISVSLRVRGQYTTSASVWPLVMVSRSGNNFTN
complement(1953564..1954211)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail tip assembly protein; Lambda gpI homolog; STU288_09325; phage(gi169257217)     5.57e-156           SalmonellaentericasubspentericaserovarTyphimuriumstrU288MATTHALHLATPGMARICLYGDLQRFCRRVSLQVASGAEAVRALAVQLPGLRQKLNDGWYQVRIAGDDVTADTLTTSLHDPLPPGAVIHIVPRLGGAKSGGVFQAVLGAALIAVAWWNPAGWLGAAAVSGMYMTGASMVLGGVAQMLAPKPKMSEMRQTDNGRQNTYFSSLDNMVANGNTLPVLYGEMQVGSRVISQEVSTADEGDGGQVVVIGR
complement(1954109..1954744)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail tip assembly protein; Lambda gpK homolog; STU288_09330; phage(gi169257218)     2.62e-148           SalmonellaentericasubspentericaserovarTyphimuriumstrU288MNISAAPEDYFRMAPEDWLRAETQGDIVALVHSHPGGQPYLSDVDRRLQVQSDLPWWLVCAGQVHKFRCVPHLTGRHYKHGVFDCYTLFRDAYHLAGIDMPDFHRDDDWWRHGDNLYLDNLETTGFYRVSAASAQPGDVLICCFGSSVPNHAAIYCGDGELLHHIPEQLSKRERYTDKWQRRTHSIWRHRAWRASAFTGICNDFAAASACR
complement(1954853..1955551)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail tip assembly protein; Lambda gpL homolog; STU288_09335; phage(gi169257219)     2.36e-174           SalmonellaentericasubspentericaserovarTyphimuriumstrU288MQDISQDTLNESAKLAQSARITLWEIDLTQSGGDRYFFCNEANEKGEAVTWQGRKYDVYPVDGCGFEMNGKGAAARPSLKVSNLYGMVTGMVEDLHSLVGATVIRRIVYARFLDAVNFQNGNQEADPEQESVSRWVIEQCSDLTAVSATFVLATPTETDGCVFPGRIMLANTCTWIYRSDECGYTGPAVADEFDNPTADPAKDACSRCARGCALRNNTGNFGGFLSINKLSQ
complement(1955561..1955890)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail tip assembly protein; Lambda gpM homolog; STU288_09340; phage(gi169257220)     5.72e-77            SalmonellaentericasubspentericaserovarTyphimuriumstrU288METFNWKIRPDMTVESEPKVTSIKLGDGYEQRRPAGLNNHLAKYNVTVRIRKGEHQNLEAFLSRHGGVKSFLWTPPYTWTQIRVICRKWSINVGSLWVTVTTTFEQVVI
complement(1955893..1958988)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail tape measure protein; minor tail protein; Lambda gpH homolog; STU288_09345; phage(gi169257221)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrU288MDQIANLVIDLSIDSAEFRNEVPRIKKLLNDAAGDSERSAARMQRFLDKQTEATRRTSASLEQVTASSTAYSSAVEKSAAASTRLAADVDQTRQRVEALGRKLREEQAQSAAVAAAQDRTSAAFYRQIDSVKQLSGGLQELQRIQAQVRQAKGRGDISQGDYLALVSETARKTRELTDAEALATQKKAQFIRRLKEQTTVQGLSRTELLRVKAAELGVSSAADIYIRKLERTGTATHTLGLKSAAARRELGVLAGELARGNFGALRGSGITLANRAGWIEQLMSPKGMMLGGLAGGVAAAVYGLGKAYYEGAKESETFNKQLILTGSYAGKTTGQLNAMAKSLAGNGVTQHDAAGVLAQVVGSGAFTGQAMAMVSRTATRMQENVGQSVDETIRQFKRLRDDPVNAAKELDRTLHFLTATQLEQIRVLGEQGRVADAAKIAMSAYSEEMNKRMGDVHDNLGWIERAWNAVGDAAKWAWDRMLDIGREDTLDEKIATLQEKIARDRKTPWTVSSSQTEYDQQQLNELQEQKRQKDLLDAKAQAERNYQETQKRRNEQNAALNRDNETESLRHQREVARITAMQYADAAVRNAALERENERHKKALSQQAKKPKTYHNDEARRLLLQYSQQQAQTEGQITAAKLSTTEKMTEAHKQLLSFQQRIADLSGKKLTADEQSVLAHKDEIALALQKLDISQQDLQHQNALNELKKKTLTLTSQLADEESRVRQQHAMALATMGMGDQQRGRYEERLKIQQHYQEQLEQLKRDSKAKGTYGSDEYRQAEQALKGSLDRRLAEWADYNAKVDAAQGDWTLGASRALDNFLAQGGNVAGMTENVFTNAFNGMADSIANFAVTGKGSFRSLTVSILADLAKMEARIAASKLLGSVLAMFGFGTSAGGSTPSGAYSSAALSVIPNADGGVYRSAGLSQYSGSIVNRPTFFAFAKGAGVMGEAGPEAILPLRRGADGKLGVVAAGSGGMAMFAPEYNIEIHNDAGNGQIGPQALQAVYNIGKKAAIDFWQQQSRDGGIAGGGR
complement(1958960..1959274)       PHAGE_Phage_Gifsy_1_NC_010392: part of bacteriophage tail assembly chaperone gpG by translational frameshifting; Lambda gpT homolog; STU288_09350; phage(gi169257222)     2.52e-71            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MRLAREFRRPDWRQMLAEMSATELGEWAEHFGKNSFSDMLLDAEFATLKSLISGLVTGTHHDAEMFSLITDPESLHEKTDDELMILGEGITGGVRYGPDSEPGH
complement(1959295..1959690)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail assembly chaperone; Lambda gpG homolog; STU288_09355; phage(gi169257223)     2.16e-93            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MFLNTDTFNYGGHSIVLSELSALQRVDYLKFIQQRTADYDAQPETLTEAERQTEFMQMGVDINAWLVSRSLCESKKEEEARALYESVRLEWSYEALGRGADMVLSLSGMRLPASQEDDSGSEKDTTTPEKS
complement(1959741..1960484)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage major tail subunit; Lambda gpV homolog; STU288_09360; phage(gi169257224)     4.39e-174           SalmonellaentericasubspentericaserovarTyphimuriumstrU288MGTPNPLVKTKGAGTTFWLYTGSGDAFKNPLADDDWLRLAGIKDLQPGEMSADAEDDDYLDDENADWKSTTQGQKSVGDTTATLAWKPGETGQKKLVELFDTGEVRAFRIRYPNGTVDVFRGWLSSLGKTVTSKEVMTRSVKITGVGRPSLAEEDTPDVVSVSGVTVAPASATVAAGATTTLTFTVKPDNASDKTLQVATADPLIATVTLKDNVATVKGVKAGSVNIVGISSDGSLVAVAAVTVTAS
complement(1960495..1960896)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail shaft stabilization protein; Lambda gpU homolog; STU288_09365; phage(gi169257225)     2.50e-93            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MSKHTLIRRAVLEKLESVTGAPVTLFDGLPAFVEQEDLPAIAVWLTDAQYTGLMTDEDDWQATLHTAVFLRAQAPDTELDIWMEEKIFPALEEVSGLERLIDTMTPLGYDYQRDSEMATWGMAEITYRITYTN
1961005..1962135                   PHAGE_Phage_Gifsy_1_NC_010392: transposase; STU288_09370; phage(gi169257226)         0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrU288MKRAYKYRFYPTTEQAELLAQTFGCVRFVYNSILRWRTDAYYERKEKIGYLQANARLTALKKEPEFAWLNDVSCVPLQQSLRHQQTAFANFFAGRAAYPAFKSKRHKQAAEFTASAFKYRDGKLYMAKNKIPLDVRWSRPLPSVPSTVTISKDAAGRYFVSCLCEFEPASLPITSSMVGIDVGLKDLFVTDTGFRSGNPRHTAKYAARLALLQRRLSKKAKGSKNRAKAHLKVARLHAKIADCRLDALHKATRKLINDNQVVCVESLKVRNMIRNPSLSKAIADASWGELVRQLRYKGEWAGRSVVAIDQFFPSSKRCSCCGFIMKKMPLDVRKWQCPECGTDHDRDVNAARNIKAAGLAVLAHGEPVNPESLKAA
complement(1962184..1962762)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage head-tail assembly protein; Lambda gpZ homolog; STU288_09375; phage(gi169257227)     9.02e-136           SalmonellaentericasubspentericaserovarTyphimuriumstrU288MKGLENAIRNLNSLDRQMVPRASIWAVNRVAQKAVSVATRKVARETVAGDNQVRGLPLKLVRQRVRLFKAGTDGKRSARIRINRGNLPAIKLGAAQVRMSKRRGKLLYRGSVLKIGPYLFRDAFIQQLANGRWHVMRRVNGKNRYPIDVVKIPLSGPLTQAFESATQSLIDEEIPKQLGYALKQQLRLYLSR
complement(1962790..1963173)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage minor capsid protein; forms tail attachment site on head; Lambda FII homolog; STU288_09380; phage(gi169257228)     5.83e-87            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MSQSENLFDTAISQADDAILRVMGTVATITSGVLAGATLTGVFDDPESVSYAAGGVRIEGDKPTFFVKTSLTVHLKRPDTLTILGDTFWVDRITPAGGDSSIILLGRGTPPTDNRRRTGGMFDCSPA
complement(1963184..1963543)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage accessory DNA packaging protein; Lambda FI homolog; STU288_09385; phage(gi169257229)     6.18e-80            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MATKEENIQRLRELATRLGRDPDVSGSAAELSQRVMEWEEEAEAEHLPAVENDSDESIVPPGIGQRSERVLIRALRTLHICAIDPDSNRELDMVMAGNPARISQHDVDELIAAGLIIEL
complement(1963601..1964629)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage major capsid protein; Lambda gpE homolog; STU288_09390; phage(gi169257230)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrU288MGLFTTRQLLGYTEQKVKFNPLFLSLFFRRTVTFPTQEVMLDKITGKTPIAAYVSPVVGGKVLRNRGGETRVLRPGYVKPKHEVNYAQVVERLPGEDPARLNDPAYRRLRILTDNLKQEEKAIVQVEEMQAVSAVLNGKYTMQGEQFDTVEVDFGRSAGNNIIQATGKKWSEQDRETFDPTYDLDMYCDQASGLINIAVMDGKVWRLLNGFKLFREKLDTRRGSNSQLETAVKDLGAVVSFKGYYGDLAIVVAKTSYVADNGTEKRYLPEGTLVLGNTAAEGIRCYGAIQDSQALAEGIVAATRYPKHWLTVGDPANEYTMTQSAPLMVLPDPDEFVIVTVG
complement(1964684..1965031)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage head decoration protein; Lambda gpD homolog; STU288_09395; phage(gi169257231)     2.18e-78            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MSFTTTIEKRADNRIFAGNDPAHTATGVSGITAATPMLTPLMLDDTTGKLVAWDGQKAGTAVGVLALELDGSENLLTYWKSGTFATESLAWPKSVDAIKQANAFAGSAVSHAALP
complement(1965044..1966540)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage prohead protease; Lambda gpC homolog; STU288_09400; phage(gi169257232)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrU288MQRNLSHIISQATSAPLLLEPAYARVFFCALGRESGINSLHIPGNNESLDQSDMALVTGDFMATGKPQARFYQVVNGIAVLPVTGTLVHKLGGMRPFSGMTGYDGVTARLQQAVSDPEVKGILLDIDSPGGQAAGAFDCADMIYRMREQKPVWALANETACSAAMLLAAACSHRLVTQTSRMGSIGVVMAHTSYAEKLKQEGIDITLIYSGAHKADLTPSQKLPESVYADYQQRMDEARKMFAEKVARYTGLSVDAVMATEAAVYDGQAIITTGLADGMVNAADAIGVMAEAINSNKTGGTMPELSAADAVTQENQRVMGILGCPEARGHEALAQMLAGQPGMSVAQAKSILAAAAPADTTSTADRILALEEAGGRETLAQTLAAMPEMTVEQARTILAASPIAAATSLHDAVMALDEAKGREELAEKLAVMPGMTTDQARDLLAAAPDKSGNAGLSMNNAFDAFMQSHSPGPISGGKGHSNDTETTLLMSIPGTSAT
complement(1966530..1968110)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage portal protein; Lambda gpB homolog; STU288_09405; phage(gi169257233)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrU288MKRTPVLVDVHGTPLRESLGYTGGGIGFGGQMADWMPPAESVDAALLPSLRLGNARADDLVRNNGIAANAVALHKDHIVGHLFLISYRPNWRYLGMRESAAKSFVDEVEAAWTEYCDGIFGEMDAEGKRTFTEFIREGVGVHAFNGEIFLQPVWDAETTQVFRTRFKAVSPKRVDTPGYARGNRQLRAGVETDRNGKALAYHVCDDDWPVAGGERWTRIPRFLPSGRPAMLHIFEPVEDGQTRGANQFYSVMERLKMLDTLQATQLQSAIVKAMYAATIESELDSEKAFEYITAADNKDTPLVNMLANYARYYSTNSIKLGGVKIPHLYPGDELNLQTAQDSDNGFSALEQALLRYIAAGLGVSYEQLSRDYSQVSYSSARASANESWRYFLGRRRFIAGRLATQMFSCWLEEALIRGVIRAPRARFSFWEARSSWSRSEWIGAGRMAIDGLKEVQESVMRIEAGLSTYEKELAIMGEDYQEIFRQQVRESEERRAAGLSRPVWITDTYQQQIAASRQTEEEKRAT
complement(1968107..1968310)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage head-to-tail joining protein; adapter between portal and gpFII; Lambda gpW homolog; STU288_09410; phage(gi169257234)     4.01e-42            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MATITELQEARVALHDLMTGKRVATVQKDGRRVEFTATSVGDLKKYVAELEASLCNGRRRAPVGVRL
complement(1968294..1970225)       PHAGE_Phage_Gifsy_1_NC_010392: DNA packaging protein; large terminase subunit; Lambda gpA homolog; STU288_09415; phage(gi169257235)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrU288MISGERRANNANRAITNGLIALHIPVPLTTVQWADEYYYLPKESSYTPGKWETLPFQVAIMNAMGYELIRVVNLIKSARVGYTKMLLGVEGYFIEHKSRNSLLFQPTDSSAEDFMKSHVEPTIRDVPVLLELAPWFGRKHRDNTLTLKRFSSGVGFWCLGGAAAKNYREKSVDVVCYDELSSFEPDVEKEGSPTLLGDKRIEGSVWPKSIRGSTPKVKGSCQIEKAANESAHFMRFYVPCPHCGEEQYLKFGDGSTPFGLKWEKSKPETVYYLCEHNGCVIRQSELDQKAGRWICDNTGMWTRDGLAYFSASGEEVPPPRSITFHIWTAYSPFTTWIQIIYDWLDALKDPNGVKTFINTTLGEPYEEAVAEKLSHELLLEKVIHYAAPVPERVVYLTAGIDSQRNRYEMYVWGWAPGEEAFLIDKQIIMGRHDDEDTLQRVDAVINKKYRHADGTDISISRICWDIGGIDAEIVYKRSKKHGIFRVLPVKGASVYGKPVITMPKKRNQSGVFLCEIGTDTAKEMLYARMGAVTAPADEATPYAIRFPDNPDVFTEVEAKQLVAEELVEKLVNGKFRLLWDAKGRRNEALDCLVYASAALRVSVQRWQLDLEALATSRKSEEQDTPTLEQLAAMLAGGVNGNNH
complement(1970197..1970742)       PHAGE_Phage_Gifsy_1_NC_010392: DNA packaging protein; small terminase subunit; Lambda Nu1 homolog; STU288_09420; phage(gi169257236)     1.81e-115           SalmonellaentericasubspentericaserovarTyphimuriumstrU288MNVNKKKLAEIFGCDVRTVTAWQSQGLPLVSGGGKGNEAVFDTAAAISWYAERDASIENEKLRKEVDDLRAAAESDLNPGTIDYERYRLTKAQADAQELKNAEREGLVLETELFTYILQRVAQEIAGILSRVPLVLQRKYPDLCQSHIDVVRTEIARASGRAATIADVEKWTDDFRRAQGE
1971029..1971430                   PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; STU288_09425; phage(gi169257237)     6.46e-93            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MKFKSIAKTVFLFALLTSAGFATGKNVNVEFDKGQNSARYSGVIKGYDYDTYNFQARKGQKVHVSISNEGADTYLFGPGISDSVDLSRYSSELDGNGQYTLPASGKYELKVLQTRNEARKNKAKKYSVNIQIK
complement(1971666..1972145)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage lysis protein; Rz; STU288_09430; phage(gi169257238)     4.06e-104           SalmonellaentericasubspentericaserovarTyphimuriumstrU288MMFNWKTMFVGLLLVSLIVAGRLANHYRNNAITYKYQRDTATHNLKLANETITDMTKRQRDVAALDAKYTKELADAQNRNTDLQRRLAAGSRVRVEGRCTVPTTTTTTTKTASTRRVGNAATVELSPVAGQNVLDIRAGIISDQEKLKYLQEYIRTQCK
complement(1972142..1972591)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage lysin protein; endolysin; STU288_09435; phage(gi169257239)     3.18e-106           SalmonellaentericasubspentericaserovarTyphimuriumstrU288MRISEKGITLIKEFEGCSLKAYPDPGTGGDPWTIGYGWTHSVDGKPVKPGMMIDEATAERLLKTGLVGYENDVSRLVKVKLTQGQFDALVSFAYNLGARTLSTSTLLRKLNAGDYAGAADEFLRWNKAGSKVLNGLTRRREAERALFLS
complement(1972578..1972913)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage lysis protein; holin; STU288_09440; phage(gi169257240)     8.99e-74            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MKMNDKTPEFWAAVLTGLKNAWPQILGALMAGLIAYGRLIYDGATRKNKWLEGVLCGALSLCVTSALDVVGLPVSISPFVGGIIGFVGVDKLREIAISALKKRAGVNDENQ
1973183..1973863                   PHAGE_Phage_Gifsy_1_NC_010392: virulence protein GogA; STU288_09445; phage(gi169257241)     2.10e-168           SalmonellaentericasubspentericaserovarTyphimuriumstrU288MPAGIKPIFINNMMSIYGLSNPHDSKVFPDLPEHQDNPSQLRLQHDGLATDDKARLEPMCLAEYLISGPGGMDPDIEIDDDTYDECREVLSRILEDAYTQSGTFRRLMNYAYDQELHDVEQRWLLGAGENFGTTVTDEDLESSEGRKVIALNLDDTDDDSIPECYESNDGPQPFDTTRSFIHEVVHALTHLQDKEDNNPRGPVVEYTNIILKEMGHTSPPRIAYES
complement(1973890..1974075)       PHAGE_Stx2_c_1717_NC_011357: transposase; STU288_09450; phage(gi209447153)           2.90e-20            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MFAGSDSGGEHAAVLYSLIGTCRLNNVEPEKWLRYVIEHIQDWPANRVRDLLPWKVDLSSQ
complement(1974183..1975460)       PHAGE_Stx2_c_1717_NC_011357: transposase; STU288_09455; phage(gi209447153)           4.28e-151           SalmonellaentericasubspentericaserovarTyphimuriumstrU288MDTSLAHENARLRALLQTQQDTIRQMAEYNRLLSQRVAAYASEINRLKALVAKLQRMQFGKSSEKLRAKTERQIQEAQERISALQEEMAETLGEQYDPVLPSALRQSSARKPLPASLPRETRVIRPEEECCPACGGELSSLGCDVSEQLELISSAFKVIETQRPKQACCRCDHIVQAPVPSKPIARSYAGAGLLAHVVTGKYADHLPLYRQSEIYRRQGVELSRATLGRWTGAVAELLEPLYDVLRQYVLMPGKVHADDIPVPVQEPGSGKTRTARLWVYVRDDRNAGSQMPPAVWFAYSPDRKGIHPQNHLAGYSGVLQADAYGGYRALYESGRITEAACMAHARRKIHDVHARAPTYITTEALQRIGELYAIEAEVRGCSAEQRLAARKARAAPLMQSLYDWIQQQMKHCRVTQIRQKRSHTC
complement(1975480..1975827)       PHAGE_Stx2_c_1717_NC_011357: transposase; STU288_09460; phage(gi209447152)           3.71e-57            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MISLPAGSRIWLVAGITDMRNGFNGLASKVQNVLKDDPFSGHLFIFRGRRGDQIKVLWADSDGLCLFTKRLERGRFVWPVTRDGKVHLTPAQLSMLLEGINWKHPKRTERAGIRI
complement(1975827..1976504)       PHAGE_Stx2_c_1717_NC_011357: truncated transposase; STU288_09465; phage(gi209447151)     1.36e-23            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MSIIFNGHYRMKHRTWITEALRLHFEEHLPRVVAGRRLGVPKSTVCSMFVRFRRAGLSWPLPAGMSEQELDACLYGQFSTVPVVRPESTVISEAPMVKNVPRRPNFPYEFKIALVEQSLQPGACVAQIARENGINDNLLFNWRHQYRKGGLLPSGKNMPALLPVTLTPEPDNKIPAPAQEPEQINTPSDSLCCELVLPAGTLRLKGKLTPALLQTLIREIKGSSH
complement(1976790..1976978)       PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; STU288_09470; phage(gi169257242)     3.22e-40            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MKEGFYWIQHNGRVQVAYYTHGVTEDLETGQTIIGVWHLTQGDDICHNGEAEILAGPLEPPI
complement(1977067..1977143)       tRNA                                                                                 N/A                 CCGCCATTAGCTCAACTGGAAAGAGCACGGAGCTTCTACCTCTGTGGTTCGGGGTTCGAATCCTCGATGGCGGACCA
complement(1977485..1978048)       PHAGE_Phage_Gifsy_1_NC_010392: conserved hypothetical bacteriophage protein; STU288_09475; phage(gi169257243)     9.13e-137           SalmonellaentericasubspentericaserovarTyphimuriumstrU288MTTQISVETLSPITHNQIPVITTELLAHLYGTKIKNISDNFLNNTTRFVVGKHFFKIEKNELREFKNRPETIGLVGKNARSLILWTERGAARHAKMLETDQAWEVFEKLEDCYFSQTLPSPTRQVQPAVDMLNIDLLIKIRDGNVKDIRQVGLDMFVGKVEQILSGLRDSGWIVIKRDLLAEKLATW
complement(1978321..1978998)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage antiterminator protein Q; STU288_09480; phage(gi169257244)     2.32e-165           SalmonellaentericasubspentericaserovarTyphimuriumstrU288MNTQYLQYVREQLMVATADLSGETKGQLLAWLENAQFDTKNYPRKKQRIWDEETESWITLNNPPIPGKQSLAKGSAIPLVKPVEYSTASWRRAVLSLDEHYKAWLLWNYSENTCWEHQVEITQWGWSAFAAQLDGKKMAGKTQERLRALIWLAAQDVKSELAGREVYQYKELAGLVGVSEKNWSETFTRHWLTMRAIFLRLDQASLLSVSESRSEQVAFNLYALN
complement(1978995..1979135)       PHAGE_Phage_Gifsy_1_NC_010392: conserved hypothetical bacteriophage protein; STU288_09485; phage(gi169257245)     4.92e-26            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MKPELIEILRMRWQRLRIYRRPGSVLVDYRILRNFVRIYQFTGFTQ
complement(1979132..1979743)       PHAGE_Phage_Gifsy_1_NC_010392: NinG; STU288_09490; phage(gi169257246)                8.78e-148           SalmonellaentericasubspentericaserovarTyphimuriumstrU288MAKLPRRKCANKECRQWFHPIREGQIVCSYQCASAVGKEQTRKAREAAQRKAQSLQRAAEKKERAAWRQRKAAVKPLKHWIDLTQRAVNDICRETELAEGLGCISCGTKTAFAWHAGHYRSTAAAGHLRFTRFNIHLQCDVCNVYKSGNIEAYRTALVERYGEAAVLALENNNTPHRWTVEELKEIRLAALADLRALKKLEAA
complement(1979952..1980572)       PHAGE_Phage_Gifsy_1_NC_010392: conserved hypothetical bacteriophage protein; STU288_09495; phage(gi169257248)     7.18e-125           SalmonellaentericasubspentericaserovarTyphimuriumstrU288MRHGEYHGARITTHQAVIWNSDPRYAGDQRNSAVKIKLGAVLVAEFRQVRNPAFHRRFFALLNLGFEYWEPTGGAISANERKLVNGYAKFLAAYGGNESALLDAAEQYLEQIANRRVTNGISLCKSFDAYRAWVTVEAGHYDAIQLPDGTLRKHPRSIAFSSMDEVEFQQLYKSALDVLWRWILSRTFRTQREAENAAAQLMSWAG
complement(1980969..1981202)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage putative DNA damage-inducible protein; DinI homolog; STU288_09500; phage(gi169257250)     4.20e-51            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MRIELVISRAKQLPEGAVPALEKELITRLQNQYENCNLTIRRGSQDGLSIVGAADGDKKRIQSILQETWESADDWFY
complement(1981494..1981763)       PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; STU288_09505; phage(gi169257251)     3.11e-60            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MYQRMIFEEGKEPRLYSSQHDSKFIPISNNNGKVQKVPVMELKDTRGDVFYAYNYAYSGKKPSNDEIYKAIDELKPIGEKFEMSKTISD
complement(1981862..1982173)       PHAGE_Phage_Gifsy_1_NC_010392: conserved hypothetical bacteriophage protein; STU288_09510; phage(gi169257252)     4.88e-70            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MSNIDKRALREVAERATPGNWRRTSSLFNGITVTPFSLCGEEVTLAHTVEKRDAEFIAAANPATVLALLDVLYEFGEDEVAISEYVTNLEDALRVAAAPQQEE
complement(1982170..1982517)       PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; STU288_09515; phage(gi169257253)     6.28e-80            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MARPKTQSERMIILERIIGLVKEQGRITTNDVVAIFGVHRTTAEKYLRIALERGGFIRHGRCGIFRDQRAVIDYDLRRYSSSQVTGFSALPVLEKSPVMQVYGASKMSINKGGAQ
complement(1982528..1983277)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage DNA replication protein; DnaC homolog; STU288_09520; phage(gi169257254)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrU288MKNVIGTGSALDRLKRIIPASVQPKFSTADEWRAWQEAEGRKRSEELDRMNQKSRTEKIFGRSGIQDLHRSCTFANYEVSGEGQRKAYTMAKSYAQNFGSGFASFVFSGGPGTGKNHLAAAIGNHLLAGGHSVLVVTIPDLMLRVRECYDGGQSEASLLDDLCKVDLLVLDEVGIQRGSSGEKVILNQVIDRRLSSMRPVGVLTNLNHEGLLDSLGARVIDRLQMDGGMWVNFDWESYRKNVSHLRIVK
complement(1983280..1984263)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage replication protein O; STU288_09525; phage(gi169257255)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrU288MSMSNTAEIYKFPAPIPTQQECRMADLENGYLRLANQIQDALCIVELSGREFRVLNAIIRLTYGWSKKSDRIANSLIADKTTLKVKHVSEAVLSLAYRNIIILRRIGQTRYIGINTNLDKWAYSKPHCSKCPVSFPDDEIATWIISVPETRDSYPRKGGRASPKTGIVIPENRDSVLPHSAIPENGDSYPRKEGRASPKTGNTKDIIPKTNIKDLTPFNPPKGKVKFDPLSIPVPEWLNAASWNEWVTYRQQSGKPIKTELTVTKAFRLLKECLDEGHDPVNVINTSIANGYQGLFKPKFALNDRRAGRDVNHISAPDKTIPTGFRG
complement(1984348..1984497)       PHAGE_Phage_Gifsy_1_NC_010392: probable regulatory protein; transcriptional activator; lambda CII analog; STU288_09530; phage(gi169257256)     1.25e-27            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MAKELAFLGIQAAPPEAVLVSRNYLTAVEILADAGLKAERARPDALGWD
complement(1984688..1984927)       PHAGE_Phage_Gifsy_1_NC_010392: conserved hypothetical prophage protein; putative Cro analog; STU288_09535; phage(gi169257257)     1.32e-53            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MDNQLKIKISNHMTQMSIGEHFGISSQAVGKWLRKGVIPPRRILPLCEILEWKVTPHEIDPAAYPNPTDGLPSQEASAK
1985041..1985457                   PHAGE_Phage_Gifsy_1_NC_010392: probable regulatory protein; putative repressor protein; helix-turn-helix motif; STU288_09540; phage(gi169257258)     3.28e-96            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MNMNKNLHPIFAKRIQQVLDENGWSMADLSRRVMLSHTSVRKWASGTSVASGERLKRLSAVTGRPEYWFFMEPGDESEGERAEPKPRVLDEKEETLLSLFNQLPEAEKLRVILHTKAVLQEMDLLKNNVFDLINDLKK
1985760..1985921                   PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; STU288_09545; phage(gi169257260)     5.13e-18            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MLKQCGYCRKSIDEGKEVKNTLLYLNGSQLARKERNIVPGSALNTTRWRTKVK
1985939..1986289                   PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; STU288_09550; phage(gi169257261)     1.84e-82            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MKNSPLIWRGFLHPEFKTGEIMEIVKIEMNLKAVNKSIALFNCEKKVSGVIHSNSTGETTVILDGGYVLGKFDCPHCAVKAISLLTVKVSDGEQAGFGNYRSYKLDYSEKFYQTIH
1986416..1989343                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage exodeoxyribonuclease VIII-like protein; STU288_09555; phage(gi169257262)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrU288MSGTNPVFLVRKAKKSSGQKDAVLWCSDDFEAANATLDYLLIKSGAKLKDYFKAVATNFPVVNELPPEGELSLTFCDYYQLAKDNMTWTQIPGVTLPSSEAAAAARQHIVDGVDTETGEVLEDHTENFGNESNSPAQATAPAPELTVVATMPLRHRVLAQYIGEGEYLYHVDASQKKEILRLEMDTDNSYVQNLLLAAENVEAFKKAIEHDIHKIVNAVKKVFPVDGKTPELATVIQFLKTWFETEHIDRGLLVKEWAKGNRVSAIQRTESGANAGGGNKTDRNPDYEHTLDTLDVEIAMATLPMDFNIYELPGSVYRRAKEIVKKKESPFKEWSAALRATPGILDYSRAAIFALIRSAHPEFYHYPGRLQGYINANLTETDHENPTEEALTAARHTPEKDAVEEANRQLAAARGEYVEGISDPNDPKWVKTGTSQPTTEPELVKNVGNGIFDVSALMQNSSTHGTETNPETTSNVQVQKADSDEKQAGDAVQAGEGDLGTGKEAVTVENQNQAETHQNNDSVSQSEPEAQQNVPESQQEEPEAAWPEYFEPGRYEGVPNEVYHAANGISSTQVKDARVSLMYFNARHVEKTIVKERSPVLDMGNLVHVLALQPENLEAEFSVEPEIPEGAFTTTATLREFIDAHNASLPALLSADDIKALLEEYNATLPSQMPLGASVDETYASYEQLPEEFQRIENGTKHTATAMKACIKEYNATLPAPVKTSGSRDALLEQLAIINPDLVAQEAQKSSPLKVSGTKADLIQAVKSVNPAVVFADELLDAWRENTEGKVLVTRQQLSTALNIQKALLEHPTAGKLLTHPSRAVEVSYFGIDEETGLEVRVRPDLELDMGGLRIGADLKTISMWNIKQEGLRAKLHREIIDRDYHLSAAMYCETAALDQFFWIFVNKDENYHWVAIIEASTELLELGMLEYRKTMREIANGFDTGEWSAPITEDYTDELNDFDVRRLEALRVQA
1989354..1990463                   PHAGE_Phage_Gifsy_1_NC_010392: RecT; STU288_09560; phage(gi169257263)                0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrU288MENTNIVTTEQQAPNTISASNAIFNVQALGQLTAFANLMADSQVTVPAHLAGKPADCMAIVMQAMQWGMNPYAVAQKTHLVNGVLGYEAQLVNAVIASSSAIHGRFHYRYGGDWERCTRTQEITRDKNGKNGKYTVTERVRGWTDEDEIGLFVQVGAILRGESEITWGEPLYLSGVVTRNSPLWVSNPKQQIAYLGVKYWARLYCPEVILGVYSPDEVEQREEREINPAPVQRMSVQEITSEVSTRTSAQESAANVDAVADDLRERIDTASSVDQAKAIRADIESQKALLGTALFTELKNKAVKRYYQVDAQNKVEAVINSIPNPGEPEAAEMFAKAESTLGAAKRHLGDELHDKYRVTLDDMKPEYIG
1990506..1990745                   PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; STU288_09565; phage(gi169257264)     1.19e-52            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MRLINRSKQSPLGRRACDVALAAHHEKFGDYGRQKHVTNYTVVVDGVKVPVEVVNRATSYVATAMIGVRKLRNLPAQAN
1990786..1991034                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage excisionase; STU288_09570; phage(gi169257269)     1.40e-55            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MSNIIQLTPNKWVSEKVLIAVTGLKPGTITRARKESWMLGREYLHISPDGNPKPSSECIYNREAVDQWIEAQKKNQPGAKTT
1990877..1990889                   attR                                                                                 N/A                 GCGCCAGAAAAGA
1991079..1992371                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage integrase; STU288_09575; phage(gi169257268)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrU288MANASYPTGVENHGGSLRIWFLYKGKRVRENLGIPDTAKNRKIAGELRSSVCFAIRMGNFNYVEKFPNSPNLARFGQDRKEITVLELTERWSELKRMEISSNTMSRYESIIKNMLPLIGENKMVSAVTTEDLLYVRKELLTGFQVMKKDHRTQVKGRKSSTVNNYMMLMAEIFQFGTDNGYAKENPFSGINRLKKAKGEPDPLTTDEFIRFIQACGHQQMRNLWSLAVYTGMRHGELCGLAWEDIDLHAGTIIVKRNLTQTDEFTLPKTDAGTDRVIYLIQPAIDALRNQAQLTRLGRQFEVEVKLREYGQSVIQPCTFVFSPQCVKRGPRTGYHYAVNSINKIWAPIIKRAGIRYRNAYQSRHTYACWSLSAGANPNFIATQMGHTDAQMVYKVYGKWMSEKSAEQVSLLNQALFRYAPSLPQSMVAAQ

#### region 4 ####
2427947..2427964                   attL                                                                                 N/A                 CCGCATAGCCCCGCCAGT
2429995..2430357                   PHAGE_Entero_UAB_Phi20_NC_031019: hypothetical protein; STU288_11580; phage(gi100049)     1.13e-79            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MLKLFAKYTSIGVLNTLIHWGVFAFCVYGMHTHQALANFSGFVIAVSFSFYANARFTFNASTTTLRYMMYVGFMGTLSAVVGWMADKCSLPPLLTLVTFSAISLICGFIYSKFIVFRDAK
2430354..2431280                   PHAGE_Entero_UAB_Phi20_NC_031019: hypothetical protein; STU288_11585; phage(gi100048)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrU288MKISLVVPVFNEEATIPIFYKTVREFEELKPYEVEIVFINDGSKDATESIINKIAASDPLVIPLSFTRNFGKEPALFAGLDHATGDAVIPIDVDLQDPIEVIPHLIEKWQAGADMVLAKRSDRSTDGRMKRKTAEWFYKLHNKISNPKIEENVGDFRLMSREVVENIKQMPERNLFMKGVLSWVGGKTDVVEYARAERVAGDSKFNGWKLWNLALEGITSFSTFPLRIWTYIGLFIAGMSFLYGAWMIIDKLIFGNNVPGYPSLLVSVLFLGGVQLIGIGILGEYIGRIYIETKKRPKYIIKNEKKNG
2431273..2432913                   PHAGE_Salmon_epsilon34_NC_011976: GtrC; putative membrane protein; STU288_11590; phage(gi221328637)     1.86e-102           SalmonellaentericasubspentericaserovarTyphimuriumstrU288MVNNRLKMVIAILIVFSLVYSIGFITPMNSDDYTYALRELSLSSVKMHYLGWSGRVVSDTISTSLLKFFSPHIYNAINSAALTLMVLCWTMIPATLTKSSPSPYVMIFLFFLYFVANPALGQTNFWLVGSANYLWTNMFIAIYILISIYLSNGKKSNLILFVYAISSIFAGCSNENTSLVVVLISVAYFFIMNRNKYLLIGVFGSAIGAGVLLLAPGNLSRASTIQDWYNQPLAWRVLEHFSERLPSAMGAYWQVYIAFIILLISVVLSRNSSSKLMFGSFLFMLGAIAANVAFLASPAMPSRALNGALCFMILSISFVAHSAFTKFNKASIYLSVTTYAMAFLYFIPSYILYYSSIKSISKQTEIREEIIDRAKHNKQDQAIIPDYYFPPVLHAGPSLDTFNSEAMSRYYGIDLKITAPGFFDYSRAFNFKPLNINAKICNNVYIKSLWIYKQQMGIKTFVIFEFNKNPADSLDENTAMFISFKTKDGKIINADVDKKTFQIDGRWLSGRAINGIDSNELESITSGTWDVRTGARTNENITEIIK
complement(2432970..2433128)       PHAGE_Salmon_Marshall_NC_022772: tailspike; STU288_11595; phage(gi568191873)         1.26e-17            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MGFGHMRILACIGQLPESGLMHYGSVGFFFGTDGALRLLAKKPDGAFVTYDM
2433300..2433518                   PROPHAGE_Xantho_33913: ISxac3 transposase; STU288_11600; phage(gi21231087)           4.55e-15            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MSGKRYPEEFKIEAVRQVVERGHSVSSAATHLDITTHSLYARIKKYGSNSSTNKEIKSSQMIRPESADSRKS
2433855..2434124                   PHAGE_Salmon_epsilon34_NC_011976: Tyrosine integrase; STU288_11605; phage(gi221328640)     8.41e-16            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MVRASRCHRLNMKTYIINDSEVSRLSVVIHRYAHLAPNHLTEHARKIDDIFGDDVPNMSHMENKEEIKKRNTLIYKWRALQDSNLRPTA
2439470..2439487                   attR                                                                                 N/A                 CCGCATAGCCCCGCCAGT

#### region 5 ####
2677719..2678519                   PROPHAGE_Escher_MG1655: IS3 transposase B; STU288_12775; phage(gi16128284)           4.44e-147           SalmonellaentericasubspentericaserovarTyphimuriumstrU288MLASTPPTSTGVFNRALSSLAIACICKRYVWHQRRHQINRRQRFHLVCDNVFREAFSDAKQRYGAPRLTDELRAQGYQFNVKTVAASLRRQGLRAKASRRFRPVSYRKHGLPVSENLLKQDFYASGPNQKWVGDITYLRTGEGWLYLAVVIDLWSRSVIGWSMSSRMTAQLACDALQMALWRRKCPENVIVHTDRGGQYCSTDYQSLLKRHNLRGSMSARGCCYDNACAESFFHTLKVECIHGEDFVSREIMRTAVFNYSECDYNR
2678845..2678890                   attL                                                                                 N/A                 TGGTGCCGATAATAGGAGTCGAACCTACGACCTTCGCATTACGAAT
2679179..2679541                   PHAGE_Entero_UAB_Phi20_NC_031019: hypothetical protein; STU288_12780; phage(gi100049)     3.64e-83            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MLKLFAKYTSIGVLNTLIHWGVFAFCVYGMHTHQALANFSGFVIAVSFSFYANARFTFNATTTTLRYMMYVGFMGTLSAVVGWMADQCSLPPLITLITFSAISLVCGFIYSRFIVFRDIR
2679538..2680470                   PHAGE_Salmon_ST160_NC_014900: GtrB; STU288_12785; phage(gi318065903)                 0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrU288MKISLVVPVFNEEDTIPIFYKTVREFNELKEYEIEIVFINDGSKDATESIINKIAASDPLVIPLSFTRNFGKEPALFAGLDHATGDAVIPIDVDLQDPIEVIPHLIEKWQAGADMVLAKRSDRSTDGRLKRKTAEWFYKLHNKISNPKIEENVGDFRLMSRAVVENIKQMPERNLFMKGVLSWVGGKTDVVKYARAERVAGDSKFNGWKLWNLALEGITSFSTFPLRIWTYIGLFIAGMSFLYGAWMIIDKLIFGNNVPGYPSLLVSVLFLGGVQLIGIGILGEYIGRIYIETKQRPKYILKRKGFKSEI
2680460..2681917                   PHAGE_Entero_ST104_NC_005841: O-antigen conversion protein C; STU288_12790; phage(gi46358649)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrU288MKFNSNDRIFISIFLGLAIIYTFPLLTHQSFFVDDLGRSLYGGLGWSGNGRPLSDFIFYIINFGTPIIDASPLPLMLGIVILALALSCIREKLFGDDYITASLCFMMILANPFFIENLSYRYDSLTMCMSVAISIISSYVAYQYKPINIIISSILTIAFLSLYQAALNTYAIFLLAFIISDVVKKNSISNITKNTASSVAGLIVGYFAYSYFIAKRLVTGSYNIEHSKIIEINSSLFEGIISNVLSFYRMFSTILNGDNYLIYYSLFFALIISLIVIVLKVIKRDENKKTKFLLVVLILLASMFFIIGPMIFLKSPIYAPRVLIGMGGFMFFCCLCVFYAFEDKQLISRIYFSFILLISTIFSYGAYNAINAQFQLEESIVNRISQDIDHLGFGRDKKNIKFIGTEPYASINENIVIKHPLMRELIPRIINNNWMWSEVLMQRNVFSRNYRLYDKEVKLENGWKKSGNNVYDIGVVGETIVVRFN
complement(2681976..2683979)       PHAGE_Entero_ST104_NC_005841: gp9; STU288_12795; phage(gi46358712)                   0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrU288MTDITANVVVSNPRPVFTESRSFKAVANGKIYIGQIDTDPVNPANQIPVYIENEDGSHVQIAQPLIINAAGKIVYNGQLVKIVTVQGHSMAIYDANGSQVDYIANVLKYDPDQYSIEADKKFKYSVKLSDYPTLQDAASAAVDGLLIDVDYHFYNGEKVDFGGKVLTIECKAKFIGDGNLIFTKLGKGSRIAGVFMESTTTPWVIKPWTDDNQWLTDAAAVVATLKQSKTDGYQPTVSDYVKFPGIETLLPPNAKGQNITSTLEIRECIGVEVHRASGLMAGFLFRGCHFCKMVDANNPSGGKDGIITFENLSGDWGKGNYVIGGRTSYGSVSSAQFLRNNGGFERDGGVIGFTSYRAGESGVKTWQGTVGSTTSRNYNLQFRDSVVIYPVWDGFDLGADTDMNPELDRPGDYPITQYPLHQLPLNHLIDNLLVRGALGVGFGMDGKGMYVSNITVEDCAGSGAYLLTHESVFTNIAIIDTNTKDFQANQIYISGACRVNGLRLIGIRSTDGQGLTIDAPNSTVSGITGMVDPSRINVANLAEEGLGNIRANSFGYDSAAIKLRIHKLSKTLDSGALYSHINGGPGSGSAWTQLTAISGNTPDAVSLKVNHKDCRGAEIPFVPDIASDDFIKDSSCFLPYWENNSTSLKALVKKPNGELVRLTLATL
2684115..2684363                   PHAGE_Entero_ST104_NC_005841: Mnt; STU288_12800; phage(gi46358711)                   3.74e-53            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MGRDDPQFNLRLPYELKEKVKQRAKANGRSLNAELVQIVADSLEKPTPVIGYRDDAEREADIVSREIQELVFEKLKDFYRKK
complement(2684816..2686792)       PHAGE_Entero_ST104_NC_005841: gp16; STU288_12805; phage(gi46358709)                  0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrU288MAKAWKDVIASQKYQALAPEQKAQAQEQYFNEVVAPQAGNDAEQAKQAFYAAYPPPTAQQPAKQPHGPAQPQQQGGFMSDLSNAAAETGRGLLQAGVNLANIPASMADAVASAGAWAGQKLGIGDGTYQPSPRVTTQGLEQDFGLQQGALTPQTTEGKIFSEALPYLTPVGAERIAAQASSIAGRVAQGASRLLAENAVGSLAANSERDNPGALATDLGTGVALGGAINQLGRAAGAAYRGIRGTIAPEAQQAIQFANAADVPLHTTDVLQPNSRVGRMAQTTAENIPFAGTSTMRANQQEARSQLVDEFASRFGEYDPSIVIGSLKAKTSGIRKAAGNRLEQVQSAMTGVNIQPTRAIQQIDDEIGKLQKLGQVADTDTISKLQAYRNELAKGDVNLEQLSRLRTQFRMDVRGERTQMPPPAEAAVQRVYRAMTGDIDNSIGQNLGNDTLRRYKQANAVYADEASKLQNTRLKNVLMKGDLTPEVVNNMLFSKNKSEVQNLYRSVGQVGRAQMRNGIIGKAMEKSGGSPDQFLRQVNLMSTQTGIAFKGRDAAYLKGLKNYLESTKRAGQAGVTTPTGQQTIPFILGIGTVTTPALVGVGGGYGLLARMYESEPARNAMLRLANTPRGSTAFEKALAEVERAVNSVAQGAKSDALSE
complement(2686792..2688228)       PHAGE_Entero_ST104_NC_005841: gp20; STU288_12810; phage(gi46358708)                  0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrU288MATWQQGINSGGFLAGIGAQNENAPKASDINATLGLIRENNELARSGANNVALTGLRGLAGVADIYNQEQQQKALNAFNQVHANAWATGDNSGLIKFAQENPAFVAQAQQAFSGLNEQQRNDMGDLAMKANVALSQGPEAYSKFITDNKDRLNRVGANPDWMIQTGVQNPEQLSHMLTTMSLGALGTEKAFAVQDKMVGRQLEGERNQLTARGQDISAATARRGQDISTQNSLRSAGGAVPASVREYQYFNSLSPEQQKNYLRVRGRPDAGGENVVQLADGRTVNVNGKLHGSGASAFYEGTDDNGNMVRVPASAIAAPPTSAASAQNYAMKKDIDAIANADASALDFMTGMTGGAGNPAIGADVRSRLTGKEQRQLYNSAQRIQGRMQNQGVAAARDMGASGINTIAEAKMYFQGMPQVDYSSPEAMQQSIREIQEYTNNYNKQYNVNVGKSQYQQSQPVQESQPASNSNFSSLWGD
complement(2688239..2688928)       PHAGE_Entero_ST104_NC_005841: gp7; STU288_12815; phage(gi46358707)                   3.56e-156           SalmonellaentericasubspentericaserovarTyphimuriumstrU288MLYAFTLGRKLRGEEPYYPEKGGKGGADKSAKYAAEAQKYAADLQNQQFNTIMNNLKPFTPLADKYIGSLEGLSSLEGQGQALNNYYNSQQYQDFVGQARYQNLAAAEATGGLGSTATSNQLAAIAPTLGQQWLSGQMNNYQNLANIGLGALQGQANAGQTYANNMSQISQQSAALAAANANRPSAMQSAIGGGASGAIAGAGLAKLIGSSTPWGAAIGGGLGLLGSLF
complement(2688931..2689386)       PHAGE_Entero_ST104_NC_005841: head assembly protein; STU288_12820; phage(gi46358706)     5.43e-111           SalmonellaentericasubspentericaserovarTyphimuriumstrU288MITFIPTRNIDLIETVGNHPDIIAGSNNGDGYDYKPECRYFEVNVHGQFGGIVYYNEIQPLTFDCHAMYLPEIRGFSKEIGLTFWRYILTNTTVQCVTSFAARKFRHGQMYCAMIGLKRVGTIKKYFKGVDDVTFYSATREELIDFLNHGR
complement(2689386..2690087)       PHAGE_Entero_ST104_NC_005841: gp26; STU288_12825; phage(gi46358705)                  7.56e-166           SalmonellaentericasubspentericaserovarTyphimuriumstrU288MADPSLNKPVIIQATRLDASILPRNVFSQSYLLYVIAQGADVGAIAGKANEAGQGAYDAQVKNDEQDVELADHEAKIQQLRIDVDDHEIRITANTNAIAALDVRLTTAEGEIVTLQADVSALDGRVTTAEGNISALQVDYVSKTATATQSLASPLNVTTSYSVGGTKVIGARQTGWTAATGAALLGAFNANQAYTVSATYTQSEVSALATGLQQARQRIKALEDAIRTHGLIN
complement(2690091..2691509)       PHAGE_Entero_ST104_NC_005841: gp10; STU288_12830; phage(gi46358704)                  0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrU288MPIQQLPMMKGMGKDFKNADYIDYLPINMLATPKEVLNSSGYLRSFPGIAKRNDVNGVSRGVEYNTAQNAVYRVCGGKLYKGEAVVGDVAGSGRVSMAHGRTSQAVGVNGQLIEYRYDGAVKTVSNWPADSGFTQYELGSVRDITRLRGRYAWSKDGTDSWFITDLEDESHPDRYSAEYRAESQPDGIIGIGSWRDFIVCFGSSTIEYFSLTGATTVGAALYVAQPSLMVQKGIAGTYCKTPFADSYAFISHPATGAPSVYIIGSGQASPIATASIEKIIRSYTAEELATGVMETLRFDSHELLIIHLPRHVLVYDASSSQNGPQWCVLKTGLYDDVYRAVDFMYEGNQITCGDKSEALTGQLQFDISSQYGLQQEHLLFTPLFKADNARCFDLEVESSTGVAQYADRLFLSATTDGINYGREQMIEQNEPFVYDKRVIWKRVGRIRRLIGFKLRVITKSPVTLSGCQIRLE
complement(2691469..2691969)       PHAGE_Entero_ST104_NC_005841: Gp4; STU288_12835; phage(gi46358702)                   2.93e-122           SalmonellaentericasubspentericaserovarTyphimuriumstrU288MQIKTKGDLVRAALRKLGVASDATLTDVEPQSMQDAVDDLEAMMAEWYQDGKGIVTGYVFSDDDNPPSEGDDHGLRSSAISAVFHNLACRIAPDYALEATAKIIATAKYGKELLYKQTAIARAKRAPYPSRMPTGSGNSFANLNEWHYFPGEQNADSTTPHDEGNG
complement(2691953..2692513)       PHAGE_Entero_ST104_NC_005841: ORF54; STU288_12840; phage(gi46358701)                 9.13e-135           SalmonellaentericasubspentericaserovarTyphimuriumstrU288MGVMLYKQGRGTKVWGKDVQVKVVDDGDVEDHLADGWVRHPNEVPETNDEPIGDSGVVKKDMGEVSDGYHTFNELYAHRVRLFSTLMNAFRESAWWSFQHHDGEQWDGWVLAGIDTPEGAVTYHLPESEIEHLPKGTEIEFGKEWDGHTADDVLNRLLSLRPKEPATKERKKPGPKPKAESDADKD
complement(2692554..2693846)       PHAGE_Entero_ST104_NC_005841: coat protein; STU288_12845; phage(gi46358700)          0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrU288MALNEGQIVTLAVDEIIETISAITPMAQKAKKYTPPAASMQRSSNTIWMPVEQESPTQEGWDLTDKATGLLELNVAVNMGEPDNDFFQLRADDLRDETAYRHRIQSAARKLANNVELKVANMAAEMGSLVITSPDAIGTNTADAWNFVADAEELMFSRELNRDMGTSYFFNPQDYKKAGYDLTKRDIFGRIPEEAYRDGTIQRQVAGFDDVLRSPKLPVLTKSTATGITVSGAQSFKPVAWQLDNDGNKVNVDNRFATVTLSATTGLKRGDKISFTGVKFLGQMAKNVLAQDATFSVVRVVDGTHVEITPKPVALDDVSLSPEQRAYANVNTSLADAMAVNILNVKDARTNVFWADDAIRIVSQPIPANHELFAGMKTTSFSIPDVGLNGIFATQGDISTLSGLCRIALWYGVNATRPEAIGVGLPGQTA
complement(2693846..2694757)       PHAGE_Entero_ST104_NC_005841: Gp8; STU288_12850; phage(gi46358699)                   0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrU288MEPTTEIQATEDLTLSGDHAAASADSLVVDNANDNAGQEEGFEIVLKYDETAPKQDPAKNAEFARRRIERKRQRELEQQMEAVKCGEFPESLRVNPDLPPQPDINAYLSEEGLAKYDYDNSRALAAFNAANTEWLMKAQDARSNAVAEQGRKTQEFTQKSAQYVEAARKHYDAAEKLNIPDYQEKEDAFMQLVPPAVGADIMRLFPEKSAALMYHLGANPEKARQLLAMDGQSALIELTRLSERLTLKPRGKQISSAPPADQPITGDVSAANKDAIRKQMDAAASKGDVETYRKLKAKLKGIR
complement(2694771..2696948)       PHAGE_Entero_ST104_NC_005841: Gp1; STU288_12855; phage(gi46358698)                   0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrU288MADNENRLESILSRFDADWTASDEARREAKNDLFFSRVSQWDDWLSQYTTLQYRGQFDVVRPVVRKLVSEMRQNPIDVLYRPKDGASPDAADVLMGMYRTDMRHNTAKIAVNIAVREQIEAGVGAWRLVTDYEDQSPTSNNQVIRREPIHSACSHVIWDSNSKLMDKSDARHCTVIHSMSQNGWDDFAEKYDLDADNIPSFQNPNDWVFPWLTQDTIQIAEFYEVVEKKETAFIYQDPVTGEPVSYFKRDIKDVIDDLADSGFIKIAERQIKRRRVYKSIITCTAVLKDKQLIAGEHIPIVPVFGEWGFVEDKEVYEGVVRLTKDGQRLRNMIMSFNADIVARTPKKKPFFWPEQIAGFEHMYDGNDDYPYYLLNRTDENNGEMPTQPLAYYENPEVPQANAYMLEAATAAVKEVATLGVDAEAVNGGQVAYDTVNQLNMRADLETYVFQDNLATAMRRDGEIYQSIVNDIYDVPRNVTITLEDGSEKEVQLMAEVVDLATGERQVLNDIRGRYECYTDVGPSFQSMKQQNRSEILELLGKTPQGTPEYQLLLLQYFTLLDGKGVEMMRDYANKQLIQMGVKKPETPEEQQWLVEAQQAKQGQQDPAMVQAQGVLLQGQAELAKAQNQTLSLQIDAAKVEAQNQLNAARIAEIFNNMDLSKQSEFREFLKTVASFQQDRSEDARANAELLLKGNEQTHKQRMDIANILQSQRQNQPSGSVAETPQ
complement(2696948..2698456)       PHAGE_Entero_ST104_NC_005841: Gp2; STU288_12860; phage(gi46358697)                   0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrU288MELDAILDNLSDEEQIELLELLEEEENYRNTHLLYEFTPYSKQREFIDAGHDYPERCFMAGNQLGKSFTGAAEVAFHLTGRYPGTKGYPADGKYGGEWKGKRFYEPVVFWVGGETNETVTKTTQRILCGRIEENDEPGYGSIPKEDIISWKKSPFFPNLVDHLLVKHHTPEGVEDGISICYFKPYSQGRARWQGDTIHGVWFDEEPPYSIYGEGLTRTNKYGQFSILTFTPLMGMSDVVTKFLKNPSKSQKVVNMTIYDAEHYTDEQKEQIIASYPEHEREARARGIPTMGSGRIFQIPEETIKCQPFECPDHFYVIDAQDFGWNHPQAHIQLWWDKDADVFYLARVWKKSENTAVQAWGAVKSWANKIPVAWPHDGHQHEKGGGEQLKTQYADAGFSMLPDHATFPDGGNSVESGISELRDLMLEGRFKAFNTCEPFFEEFRLYHRDENGKIAKIVKTNDDVLDATRYGYMMRRFARMMRDIRKPKEKKIPAPIRPVRRGR
complement(2698434..2698922)       PHAGE_Entero_ST104_NC_005841: Gp3; STU288_12865; phage(gi46358696)                   7.80e-119           SalmonellaentericasubspentericaserovarTyphimuriumstrU288MAAPKGNRFWEARSSHGRNPKFESPEALWAACCEYFEWVEANPLWEMKAFSYQGEVTQEPIAKMRAMTITGLTLFLDVTLETWRQYRVREDLSEVVTRAEQIIYDQKFSGAAADLLNANIIARDLGLKEQSQFEDVTPDKGDRDKRRSRIKELFNRGTGRDS
complement(2699330..2699719)       PHAGE_Entero_ST104_NC_005841: hypothetical protein; STU288_12870; phage(gi46358694)     1.90e-94            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MAKTKWPKLPRFFVPLFHSANVYLCRSKEEWDQACIHLGVGSGGNEMLAGATQSYCNTETGENLYLLGVFNGEAATLVHECAHVAFYVCRDVGVTTYPGDANETYCYMLDRMFSHFLPFFHEPEKEGAK
complement(2699723..2699965)       PHAGE_Entero_ST104_NC_005841: hypothetical protein; STU288_12875; phage(gi46358693)     2.01e-48            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MAEITALTELQQMNLDILRLVQSDTAAAEKAIAFVAGSKLNFELFKDQLVLAQGEGTALARAEKAIREAKEALDLFTAGA
complement(2700188..2700718)       PHAGE_Entero_ST104_NC_005841: ORF45; STU288_12880; phage(gi46358692)                 9.20e-129           SalmonellaentericasubspentericaserovarTyphimuriumstrU288MKYPTVMVNGVSVRVDEDGRYNLNDLHAAAVANGEATEQQRPSKFLCSAQIKRFIKALEAKVQKSTLKQIQPLKIIKGGTEPGVWGVELLAIRYAAWIKPEFEIEVYEVFKTIVRLGVGAMSRLNKIDHIISTETKAISQCASQMAKWGVGGRTRLLHVARERAANEVQMYLPGMV
complement(2700931..2701398)       PHAGE_Entero_ST104_NC_005841: gp15; STU288_12885; phage(gi46358690)                  8.64e-110           SalmonellaentericasubspentericaserovarTyphimuriumstrU288MSRLTSIISALVICIIVCLSWAVNHYRDNAITYKVQRDTVTQKLALANATITDMQTRQRDVAELDARYTKELADAKAENDALRRKLDNGGRVLVKGKCPVSSSAETSSASGMGNDATVELSPVAGRNVLGIRDGIISDQAALRTLQEYIRTQCLK
complement(2701395..2701865)       PHAGE_Entero_ST104_NC_005841: gp19; STU288_12890; phage(gi46358689)                  4.07e-112           SalmonellaentericasubspentericaserovarTyphimuriumstrU288MAAISGGAIAIASVLITGPGGNDGLEGVRYKPYKDVVGVLTVCYGHTGKDIMPGKTYTEAECKALLNKDLITVARQINPYIKVDIPETTRGALYSFVYNVGAGNFRTSTLLRKINQGDIKGACDQLRRWTYAGGKQWKGLMTRREVERDVCLWGKQ
complement(2701870..2702073)       PHAGE_Salmon_SEN22_NC_028696: class II holin; STU288_12895; phage(gi966201365)       6.10e-43            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MYRMDKIREWFSYSFGGLTAMGGILSLNDWAVIIGILCTVGTFGINWYYKRKEREDRLNGNVTGTTK
complement(2702504..2703277)       PHAGE_Entero_ST104_NC_005841: gp23; STU288_12900; phage(gi46358687)                  0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrU288MNLENTVKFHSPKSPQLSDSPRATASDSLTNTDVMAAFGMAQSRAPLGFSAFSGKMNLSDNDKRKAIQLLVQHGMKHCDKVAALRKLDTNVKGKVVQTLATFAYQDYCRSAASNVMCSCCKGRGVLRNKKRIVKHPGCGEKTPAKTAVEVTESLCTKCNGAGVVSTSCVKCRGRGVALDRKKSELQGAPVYSSCKQCSGRGYERILAASCFRAICQFTAAISPGVWDKAIKPFYESLISKVEMEESAANVVLSKVTS
complement(2703274..2703453)       PHAGE_Entero_ST104_NC_005841: NinZ; STU288_12905; phage(gi46358686)                  5.57e-37            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MTVTSINQAKQQCERDEAELRSVREMTEQHQKAMDYLHERERELVNRLGLNKTSGGDAA
complement(2703434..2703637)       PHAGE_Entero_ST104_NC_005841: NinH; STU288_12910; phage(gi46358685)                  6.86e-44            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MTHTIKTIPDMLIETYGNQTEVARRLSCHRNTVRRYLYDKEARYHAIVNGVLMIHQGGRGIYDRNQH
complement(2703634..2703858)       PHAGE_Entero_ST104_NC_005841: NinY; STU288_12915; phage(gi46358684)                  7.02e-51            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MSKIQYPMTTAAIFDDVVYPLHFDNAGKVRQEMEGAVNWFCRWRNEEKAVVKARLLVSCWGQYLSHEQVIREAA
complement(2703855..2704466)       PHAGE_Entero_ST104_NC_005841: NinG; STU288_12920; phage(gi46358683)                  1.39e-147           SalmonellaentericasubspentericaserovarTyphimuriumstrU288MAKPARRRCKNEECREWFHPAFANQWWCSPECGTKIALERRSKEREKAEKAAEKKRRREEQKQKDKLKIRKLALKPRSYWIKQAQQAVNALIRERDRDLPCVSCGTLTSAQWDAGHYRTTAAAPQLRFDERNIHKQCVVCNQHKSGNLVPYRVELINRIGQEAVDEIESNHNRHRWTIEECKAIKAEYQQKLKDLRDSRREAA
complement(2704459..2704635)       PHAGE_Entero_ST104_NC_005841: NinF; STU288_12925; phage(gi46358682)                  3.38e-36            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MLSPSQSLQYQKESVERALTCANCGQKLHVLEVHVCEHCCAELMSDPNSSMYEEEDDG
complement(2704628..2704969)       PHAGE_Entero_ST104_NC_005841: hypothetical protein; STU288_12930; phage(gi46358681)     7.51e-82            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MDYSQLSDFEINRMVGDIIFKGLWACKPETSGNNTNKWYYGNADTTFEPLNHLPDYCNDPSASWPIIEKHRISILDQLTEWCVDAKGVSPIFDTRPLRAAMIVFLMMQDANNA
complement(2704972..2705148)       PHAGE_Entero_ST104_NC_005841: NinE; STU288_12935; phage(gi46358680)                  2.50e-36            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MARQRRSITDIICENCKYLPTKRSRNKRKPIPKESDVKTFNYTAHLWDIRWLRERARK
complement(2705285..2705722)       PHAGE_Entero_ST104_NC_005841: NinB; STU288_12940; phage(gi46358678)                  2.20e-104           SalmonellaentericasubspentericaserovarTyphimuriumstrU288MKKLTFEIRSPAHQQNAIHAVQQILPDPTKPIVVTIQERNRSLDQNRKLWACLCDVSRQVNWHGRWLDAESWKCVFTAALKQQDVVPNLAGNGFVVIGQSTSRMRVSEFAELLELIQAFGTERGVKWSDEARLALEWKARFGDAA
complement(2705719..2705799)       PHAGE_Entero_UAB_Phi20_NC_031019: hypothetical protein; STU288_12945; phage(gi100004)     4.61e-10            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MTIYITELITGLLVIAGLFIWGRGKT
complement(2705796..2706065)       PHAGE_Entero_ST104_NC_005841: ORF30; STU288_12950; phage(gi46358677)                 1.36e-61            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MNKKQLAILEKAWDAQISYALKEQALPIIQTKSKIARQLCDDGFLNEVEITHQMATFKGYEINHHGIAAYCSHLPDDVDIDEMEREMKQ
complement(2706062..2707438)       PHAGE_Entero_ST104_NC_005841: gp12; STU288_12955; phage(gi46358676)                  0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrU288MRQDIEASVIGGLLIGGLTPTASDVLATLEPEAFSIPLYRKAFEVIRKQARNRNLIDGLMVAEECGDEYATAVMMTARSCPSAANLKGYAGMVVDSYQRRQVLQLLDEMREPISNGTLDASGRAMDDLVKRLSAIRKPRNEVKPVRLGEIINDYTDTLDRRLRNGEESDTLKTGIEELDAITGGMNAEDLVIIAARPGMGKTELALKIAEGVASRVIPGSGVRRGVLIFSMEMSAIQVVERGIAGAGMMSVSVLRNPSRMDDEGWARVASGMKLLADLDVWVVDASRLSVEEIRSISERHKQEHPNLSLIMADYLGLIEKPKAERNDLAIAHISGSLKAMAKDLKTPVISLSQLSRDVEKRPNKRPTNADLRDSGSIEQDADSIIMLYREAVYDENSSAAPFAEIIVTKNRFGSLGTVYQRFCNGHFVACDQDEARQICTASNAPAARGRRYAQGADV
complement(2707435..2708256)       PHAGE_Entero_ST104_NC_005841: gp18; STU288_12960; phage(gi46358675)                  0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrU288MGVVKLADYRPHLEVVEHRVADTEDGFMRVANEITDSLLMADLTVRQLKVMLAIMRKTYGFNKPMDRLTNTQIAAMTGIHHTHVCAAKRQLIERKFLIADGVKIGVNKVVSQWISQDSLTLAKTANKTLAKSANGYKPSQLNTKDNIQKTINTNTPLPPNGGGDGQVKPERRKAERIDYESFLNAYNTEVGDRLPHAVSVNEKRKRRLKKIIPQLKTPNVDGFRAYVRAFVHQAKPFYFGDNDTGWTADFDYLLREDSLTGVREGKFADRGIA
complement(2708243..2708404)       PHAGE_Entero_HK446_NC_019714: hypothetical protein; STU288_12965; phage(gi428782236)     1.65e-31            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MTKRRKKYQEKEEIRHPDSPEGLVVAAANNRAFAERLVGVYRLAKAGVKHGRR
complement(2708439..2708720)       PHAGE_Entero_ST104_NC_005841: C1; STU288_12970; phage(gi46358673)                    1.25e-62            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MNVVATKSKKAARIESTLLNKLAMMGQKTFAKAMGVPEYQVSRWKNGFFSQVSMMLAVLEYGIEDEEMAELTRRLATYLTKEKAPKNGEFFEA
complement(2708831..2709046)       PHAGE_Entero_ST104_NC_005841: Cro; STU288_12975; phage(gi46358672)                   1.32e-44            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MTNKAIQKAVAIAGSQQKLASLCGVKQPTVWRWLHGGGIDAKYVAAIVKATGGRIKARELRPDLADLLAAS
2709157..2709846                   PHAGE_Entero_ST104_NC_005841: CI; STU288_12980; phage(gi46358671)                    1.10e-168           SalmonellaentericasubspentericaserovarTyphimuriumstrU288MKKETLSDRLNKAMELAGMSQGALAKASGVAQPTIWRLTSGNARGSTKIVEIANALGVNSEWLSTGIGPMKKDGTTPINASPSSNTFKIDILDLEVSAGPGVINREFVEILRSVEYSQDDARHMFDGRKAENIRIINVRGDSMSGTIEPGDLLFVDVSIKNFDGDGIYAFLYDDTAHVKRLQKMKDKLLVISDNKSYSAWDPIERDEMNRVFVFGKVIGSMPQTYRKHG
2710047..2711090                   PHAGE_Entero_ST104_NC_005841: ORF23; STU288_12985; phage(gi46358670)                 0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrU288MSDKESKEPTGKSKGGVARANALSAEERSAIARKAAAARWGGDGEVEIAKRSGDIVIGDLKIQCAVLEDGTRVLSERAITKAFGGKRGGSHWKRMKENPDGAYLPVFLSAKNIKPFINNELSEGLSRRRLFKINKGAAPAYGIEASLLPKICNVYLKMRDQGDALQSSQIPISVQADIIMRGLAEVGIVALVDEATGHIDEKRQDEYRILFQEFIKEQVREYEKEFPKQFTDGLYRLYGLTQKKAGRHPQFFGKFTRKYIYEPLASSKGAILEMLDEKNPVVYANGGRRYKMFQFLTDSIGVPMFRAHLWQVVGILSSSRNKAEFDRAFKRAFPSPGTQFELLDEDE
complement(2711129..2711332)       PHAGE_Salmon_118970_sal4_NC_030919: hypothetical protein; STU288_12990; phage(gi100018)     5.82e-39            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MKSEEEFFAELHPQVVEVLGTALMQVLVEQREPSREALIEMIQVLWQEEDVDLAVELAIDVLTLPKE
2711696..2711998                   PHAGE_Entero_ST104_NC_005841: gp24; STU288_12995; phage(gi46358669)                  1.66e-68            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MTVITYGKSTFAGNAKTRRHERRRKLAMERDTICNIIDSIFGCDAPDASHEVKAKRIDRVTKAISLAGTRQKEVEGGSVLLPDVALYAAGYRKSKQITAR
complement(2712011..2712598)       PHAGE_Entero_ST104_NC_005841: SieB; STU288_13000; phage(gi46358668)                  1.04e-143           SalmonellaentericasubspentericaserovarTyphimuriumstrU288MNNSWWQELMRFFLQGMTLKQLIHMIIILILLIVVMPVSVKEWVNLHNPEILPQYWMYYILLFCVSYVLNGVVNSVYHVVNERIEASTAQQRKAREEKVVRDLFDSLTLGERAYLAFAVAANNQLKTEKGSPEAISLLEKGLLIRIPSATGYPDTDRFVIPESYRNECYIRFAGESDILMNELIAQDEQAKKITT
2712812..2713006                   PHAGE_Entero_ST104_NC_005841: Ral; STU288_13005; phage(gi46358667)                   2.86e-40            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MTTTIDTNQWCSRFVKCKGCKLDAECMVKPEEMALVREDGKIVDKWAIRTTAMIARELEKLKST
complement(2713144..2713548)       PHAGE_Lactob_LP65_NC_006565: tail fiber; STU288_13010; phage(gi56693145)             7.15e-13            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MVLASCSYIFTVRYTYEVFLTQNYESEIRQVGIAQVGTAQVGIAQVGTAQVGTVQVGTVQVGTAQVGTVQVGTAQVGTAQVGTVQVGTVQVGTAQVGTVQVGTAQVGIAQVGTAQVGTVQVGTVQVGSRSALTH
2713594..2713719                   PHAGE_Entero_ST104_NC_005841: ORF19; STU288_13015; phage(gi46358666)                 7.03e-23            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MDGRKALKFYPRLLDIIDFYIGKGERPDWLTSKEYADEVTE
2713753..2714040                   PHAGE_Entero_ST104_NC_005841: ORF18; STU288_13020; phage(gi46358665)                 4.16e-66            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MKKFKGTPGPWSGKDVRICRQDRAGLQLGFIMTHDENRVAECEANAHLIAASPDLLEALQLAEKAMAEGRNVTYPEWYGVINKARAAISKALGEE
2714040..2714165                   PHAGE_Salmon_g341c_NC_013059: Enterobacter protein of unknown function; STU288_13025; phage(gi255252718)     6.70e-21            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MEINKEQASEIIKLIEQALLDGFDDEILVSLHESLTKFVSE
2714403..2714630                   PHAGE_Entero_ST104_NC_005841: hypothetical protein; STU288_13030; phage(gi46358664)     2.64e-49            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MDALADYDAFQYDNNIKPDYCNANGLEMWDESLTDQDLEEMELTDRWVDWYSECQCYDDPREYIESLKEETTTAA
2714700..2714873                   PHAGE_Entero_ST104_NC_005841: C3; STU288_13035; phage(gi46358663)                    1.36e-32            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MESPTMTFAIAGGAVMGIAQLNESLLERITRKLRAGWKRLGEILNQPGVPRHDHYAC
2714821..2715042                   PHAGE_Entero_ST104_NC_005841: Kil; STU288_13040; phage(gi46358662)                   6.96e-41            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MKFLISQEYHAMTITPVNGTILVQQGNREFNKLYEKVFPDTKQGMSDAYTWAAGIALGWDKWQDEEWEARHVA
2715032..2715175                   PHAGE_Salmon_vB_SosS_Oslo_NC_018279: Arf protein; STU288_13045; phage(gi399528801)     5.41e-25            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MLHDFDDNEFIALIPPEIEEEVEQQINLAAERQNPIISWDEFAGYYS
2715172..2715879                   PHAGE_Entero_ST104_NC_005841: ORF13; STU288_13050; phage(gi46358661)                 2.72e-176           SalmonellaentericasubspentericaserovarTyphimuriumstrU288MNLDLLDEPFAAEDIEWRIQQSGKTRDGKLWAMVLAYVTNRAIMKRLDDVCGKAGWRNEYRDIPNNGGVECGISIKIDSEWVTKWDAAENTQVEAVKGGRSGAMKRAAVQWGIGRYLYNLEEGFAQISRDKKQGWHRAKLKDGTGFYWLPPSLPDWAMPASCNQPSPENTNQKSPSVDCEQILKDFSDYAATETDKKKLIERYQHDWQLLAGHDDAQTKCVQVMNIRINELKQVA
2715879..2716163                   PHAGE_Entero_ST104_NC_005841: Abc1; STU288_13055; phage(gi46358660)                  6.61e-65            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MRRLNITPAEMESVCGRMVACRAAEHLGLNINQFYYIAKKLSLKTAFVKPRWSDDEDKRMQTLISSGYTQRNVAKILGRSEESVKSRLSRLRKK
2716210..2716503                   PHAGE_Entero_ST104_NC_005841: Abc2; STU288_13060; phage(gi46358659)                  9.85e-66            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MPAPLYGADDPRNCSGSSKSEVLENIKNNLDAFLALPPETKAERKYRRDIQLAEKQEKDRINETAIRPFRKATYTKFIEIDPRLKNYRSRYGAISNN
2716514..2716684                   PHAGE_Entero_ST104_NC_005841: ORF10; STU288_13065; phage(gi46358658)                 1.62e-35            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MRGLSYDQGILPSEMIIRHRFKPINDIPREEMLARKSFPSVNQNKYLNAMWRSGKK
2716681..2717190                   PHAGE_Entero_ST104_NC_005841: ORF9; STU288_13070; phage(gi46358657)                  4.53e-121           SalmonellaentericasubspentericaserovarTyphimuriumstrU288MKQMTLIEMDGFLKGKCIPRDLKVNETNAEYLVRKFAEAEAKISALAEDHQRAIESIKQADSAVKLAHEKFSALASENAALKKSEVEFNEYCRRECEDVGDTWVDDFTDTPATDAFLDEVRAQAFNDLCSAFVKDATVVGLDDGDIVTVKEATDALLHCADQLRKGVHS
2717260..2718051                   PHAGE_Entero_ST104_NC_005841: ORF8; STU288_13075; phage(gi46358656)                  0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrU288MALAVDSISFDAVRVALNLVANMRRLEMTARFFIQRLEQSGISEQRRQPVSKIDYQALREKAEKATCGVWSLEYGEERFDAGDALIHREVVGYLPICRIEGAHPESGFDEDFQMEQQANAEFIAAANPATVLALLDERERNQQYIKRRDQENEDIALTVGKLRFELEAAKKRIAELEAEPVSQTYKLNELSGSYPATPDGWISCSERMPNEEDVLVYCSDTKEQMVGFHKGKGLFQFFYMNGVEGVCEPSHWMPLPEPPQEVK
2718051..2718335                   PHAGE_Entero_ST104_NC_005841: ORF7; STU288_13080; phage(gi46358655)                  1.69e-65            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MDPFAKYTIIDWIAFLQVLLIWFYMAYRSGQWIVSVACSKGWRWWNRKNKKALALDSFYEAFNLNSLQPGSVVVVTTQSGMTIQIHKPKEEGRG
2718328..2718612                   PHAGE_Entero_ST104_NC_005841: ORF6; STU288_13085; phage(gi46358654)                  1.50e-65            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MANLQLAVKGEYFDAMIRGEKTEEYRLCNDYWNKRIMFREYDRLIITKGYPKRDDSSRRIDVPYDGYEIKTITHPHFGDKPVKVFAIKMNIGNE
2718684..2718821                   PHAGE_Salmon_SEN22_NC_028696: formate dehydrogenase N alpha subunit; STU288_13090; phage(gi966201338)     3.55e-23            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MILVISATYLCRRGDIDGAVYAGIAIFGFIELLVEIALLASVLGK
2718824..2719174                   PHAGE_Entero_ST104_NC_005841: Xis; STU288_13095; phage(gi46358653)                   2.69e-82            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MESHSLTLDEACAFLKISRPTATNWIRTGRLQATRKDPSKPKSPYLTTRQACVAALQSPLHTVQVSAGDDITEELKCHYSAEVKPGTPVSHCRTAKDLSSLLGQRTKGRPQSFMTN
2719051..2720214                   PHAGE_Entero_ST104_NC_005841: Int; STU288_13100; phage(gi46358652)                   0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrU288MSLFRRGETWYASFTLPNGKRFKQSLGTKDKRQATELHDKLKAEAWRVNKLGETPDMTFEEACVRWLEEKAHKKSLDDDKSRIGFWLQHFAGMQLKDITETKIYSAIQKMTNRRHEENWKLMDEACRKNGKQPPVFKPKPAAVATKATHLSFIKALLRAAEREWKMLDKAPIIKVPQPKNKRIRWLEPHEAKRLIDECPEPLKSVVEFALSTGLRRSNIINMDWQQIDMQRKVAWIHPEQSKSNQAIGVALNDTACRVLKKQIGNHHKWVFVYKESSTKPDGTKSPVVRKMRYDANTAWRSALKRAGIEDFRFHDLRHTWASWLVQAGVPISVLQEMGGWESIEMVRRYAHLAPNHLTEHARQIDSIFGTSVPNMSHSKNKEGTNNT
2720229..2720274                   attR                                                                                 N/A                 TGGTGCCGATAATAGGAGTCGAACCTACGACCTTCGCATTACGAAT

#### region 6 ####
2842184..2842230                   attL                                                                                 N/A                 ATGTAGGAATTTCGGACGCGGGTTCAACTCCCGCCAGCTCCACCAAA
complement(2842346..2842564)       PHAGE_Salmon_Fels_2_NC_010463: P2 gpOgr-like protein (acttivation of late gene expression); STU288_13625; phage(gi169936018)     2.03e-48            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MMNCPECGHAAHTRSSFQVSATTKERYNQCQNINCGCTFVTHETFVRHIIKPNLISSAPPHPGKGGQGHMSF
complement(2842633..2843733)       PHAGE_Salmon_Fels_2_NC_010463: tail protein; STU288_13630; phage(gi169936019)        0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrU288MNFNSDLLNLNSKSPAFSITIEGKDVTTVMDARLMSLTLTDNRGFEADQLDLELDDADGQIVLPRRGAVIHLALGWKGQPLFPKGAFTVDEIEHSGAPDRLTIRARSADFRETLNTRREKSWHQTTVGEVVKEIAARHNLKVALGQDLTDKALDHMDQTNESDASFLMKLARQYGAIASVKDGNLLFIRQGQGRTASGKPLPVITITRKAGDGHRFTLADRGAYTGVIASWLHTREPRKKETTSVKRRRKKATTPKEPEAKQGDYLVGTDENVLVLNRTYANRSNAERAAKMQWERLQRGVASFSLQLAEGRADLYTEMPVKVTGFKQPIDDAEWTITTLTHSVSPDNGFTTSMELEVKIDDLEIE
complement(2843730..2844215)       PHAGE_Salmon_Fels_2_NC_010463: P2 gpU-like tail protein; STU288_13635; phage(gi169936020)     1.84e-114           SalmonellaentericasubspentericaserovarTyphimuriumstrU288MMMVLGLYVFMLRTVPYQELQYQRSWRHTANSRVNRRPSTQFLGPDNDSLTLSGVLLPEVTGGRLSLLALEQMAELGKAWPLIEGSGTIYGMFVIESLSQTKTEFFASGMPRRIEFTITLKRVDESLSDMFGSLSDQLSNLQDSAASAIGGIKNTVGGLLQ
complement(2844212..2847019)       PHAGE_Salmon_Fels_2_NC_010463: P2 gpT-like tail protein; STU288_13640; phage(gi169936021)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrU288MSDNNLRLQVILNAVDKLTRPFRSAQASSKELATAIQQSRARLKELDAQAGRIDGFRKASAQLAVTGNSLKAAREEAAKLATQFSATNRPTAAQARLLEQAKNRVTELQSKYNGLRQSVQRQRLALNEAGLDTKKLSSAQRELRQNADETRQALDRQQKSLKRLGEQQARMNAVRDQYSRRLEVRDRIAGAGATTTAAGVAMGAPVVAAVKSYASMEDAMKGVAKQVNGLRDDNGNRTKQFYDMQDAIKAASEQLPMENGAIDYAALVEGGARMGVTNQDDPYEEQKRDLLAFASTAAKAATAFELPADELAEGLGKIAQLYKVPTRNIEQLGDALNYLDDNAMSKGGDIINVLQRMGGVADRLDFRKAAALGSTFLSLGAAPEIAASASNAMVRELSIATMQSKRFFEGMNLLQLNPAEIEKQMTTDAMGTIQRVLEKVNNLPQDKRLSAMTMIFGKEFGDDAAKLANNLPELQRQLKLTSGSGANGSMQKESDINKDSLSAQWLLVKTGAQNAFSSLGETLRQPLMDIMGMVKRVTGALRRWVEQNPVLAGTLMKVAAATAAITVGLGALAVAVAAVLGPLAVIRFGLSMLSVKALPSAAAAATRTGSVLRLLISGPLALLRVALFAVGSLLGALLSPVGLVVAALAGVALVIWKYWQPISAFLGGVVEGFKAAAAPISAAFEPLRPVFQWIGDRVQALWGWFNDLLTPVKSTSEELNSAAAMGRRFGEALAEGLNMVMHPLESLKSGVSWLLEKLGIVSKEAAKAKLPAQVTQQQSATVNSDGKVVLPPGGFPAYAGMYDTGGIIPRGQFGIVGENGPEIVNGPANVTSRRRTAALASVVAGVMGVAATPAEVAPLHPFSLPARTYQTQPVKADSPPSVIRYEINAPIHIVAQPGQSAQDIAREVARQLDERERRARAKARSNFSDQGGYES
complement(2847012..2847131)       PHAGE_Salmon_Fels_2_NC_010463: P2 gpE-like protein; STU288_13645; phage(gi169936022)     2.42e-21            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MADIATIFHWSPSITDVMPLTEVLAWRYKAIQRSGASDE
complement(2847146..2847448)       PHAGE_Salmon_Fels_2_NC_010463: P2 gpE-like tail protein; STU288_13650; phage(gi169936023)     2.21e-64            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MSDKLTEKTVKLDTPIMRGKTEITEIVLRKPQSGALRGTRLQAIMDMDVGAMMTVIPRISTPTLTAQEMAELDPADLTALSVEVVTFLLKKSVLAGLPTA
complement(2847503..2848018)       PHAGE_Salmon_Fels_2_NC_010463: major tail tube protein; STU288_13655; phage(gi169936024)     4.07e-122           SalmonellaentericasubspentericaserovarTyphimuriumstrU288MALPRKLKHLNLFNDGNNWQGIVESLTLPKFTRKFEKYRGGGMPGAVDVDMGLDDGALDTEFSIGGTELLLFKQMGKATVDGIQLRFTGSIQRDDTGEVQAVELVVRGRHKEVDSGEWKTGESSSTKVSSTNSYAKLTINGEVLYEVDLVNMVEIVGGVDLMEAHRNALGL
complement(2848028..2849200)       PHAGE_Salmon_Fels_2_NC_010463: major tail sheath protein; STU288_13660; phage(gi169936025)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrU288MAQDYHHGVRVVEINEGTRPITTVSTAIVGMVCTGDDADASVFPLNKPVLLTDVLTASGKAGESGTLARSLDAIADQAKPVTVVVRVAQGETEAETTSNIIGGVTSDGKKTGMKALLSAQSQLGVKPRILGVPGHDTQAVATELLGVAQSLRGFAYLAANGCKTVEEAIAYRENFSQREGMLIWPDFINFDTVLKADATAYASARALGLRAKIDEQIGWHKTLSNVGVNGVTGISADVFWDLQDPATDAGLLNKNDVTTLIRKDGFRFWGSRCLSDDPLFAFENYTRTAQVLADTMAEAHMWAVDGVLNPSLARDIIEGLRAKMRSLVNQGYLIGGDCWLDESVNDKDTLKAGKLTIDYDYTPVPPLENLMLRQRITDRYLVDFASRVAA
complement(2849303..2849860)       PHAGE_Salmon_Fels_2_NC_010463: DNA-invertase; STU288_13665; phage(gi169936026)       1.27e-133           SalmonellaentericasubspentericaserovarTyphimuriumstrU288MQIGYVRVSTNDQNTDLQRNALNCAGCELIFEDKISGTKSERPGLKKLLRTLSEGDTLVVWKLDRLGRSMRHLVVLVEELRERGINFRSLTDSIDTSTSMGRFFFHIMGALAEMERELIVERTRAGLAAARAQGRVGGRRPKLTPEQWEQAGRLLAAGETRHRVGLLFDVSISTLYKKFPVNQSR
2849890..2850909                   PHAGE_Salmon_Fels_2_NC_010463: P2 gpH-like protein; STU288_13670; phage(gi169936027)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrU288MPFTTVFCIFINLGLGETAKQAAGAVQKTGDEMSGKLTLPQTSSFGVNTNNTLGGSSIAIGDNDTGLKGNGDGNLAFMANNVLAGYFNENELQHSKKMLTKNFQALVDNNWPEGAGGFSGQLSSEAPFSVPMVHRQNNDNNFFPLLKGKVSLESGYPVAASFGILTSGNTNFPQIAIHAKTDFDVNDKIWVFDVATGEFRAPGRITATEILLSGKSRVGPDGNLYGDVWGGWLNDFLINNYNRKNTASLGDYGWVRDESTGFIMQWGTLGSSNGTYNFPREFPTSCFAVFVTNTNQQGGSVDNAFGYPVSKSQFFAATKASTDGNVVNGYPVAWFAIGR
2850916..2851323                   PHAGE_Salmon_Fels_2_NC_010463: P2 gpG-like protein; STU288_13675; phage(gi169936028)     1.80e-96            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MSDYYYSFKEKGFFYKPDTESGDFPTDLIPLTDEHYHGLMQGQVDGKYIEHRKGGPVLVEHREYTPEELVAQAESRKAELLAEAESVIAPLARAVKLKMATDEEIKRLEAWELYSVLVNRVDTSNPDWPDKPVSQ
complement(2851327..2851914)       PHAGE_Salmon_Fels_2_NC_010463: P2 gpG-like protein; STU288_13680; phage(gi169936029)     1.28e-143           SalmonellaentericasubspentericaserovarTyphimuriumstrU288MKKYQNIKNFRLIDDPVSRGKTQAEINIGAYFLESEDGQDWYECQSLFSDDTAKIMYDPEGVIWGVVNHPVPQRGNTYAVSMLWPVNMSVAEIDAADCPDDCRGDGSWLYRDGKVLPVPVDYQAKAETTRQKLLNDADNAIKDWRTELTLGIISDENKAALILWMNYINVLKSLDLTDVSDEATFTAIRWPALPQ
complement(2851914..2853488)       PHAGE_Salmon_Fels_2_NC_010463: P2 gpH-like protein; STU288_13685; phage(gi169936030)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrU288MSAKFYTLLTEIGAAKLASAAALGVPLKITHMAVGDGGGVLPTPSAQQTALVAEKRRAALNMLYIDPQNSSQIIAEQVIPETEGGWWIREVGLFDETGALIAVGNCPESYKPQLTEGSGRTQTVRMVLITSSTDNITLKIDPAVVLATRKYVDDKALELKVYVDDLMAKHLAAPDPHSQYAQKDSPTLTGIPKVPTPAAGNSTKQIANTEFVASSIAAMVDSAPAALDTLNELAAALGNDPNFATTMINALAGKQPLDNTLTNLSGKDIAGLLTYLGLGETAKQAAGAVQKTGDEMSGKLTLPQTSSFGVNTNNTLGGSSIAIGDNDTGFKQNGDGILDTFANSQHTVRVAPGEMMVLGAIRAGKEKKLSLTSNNNSTMTATFNLWGDANRPTVIELDDDQGWHLYSQRNPDGSIVFTVNGDITANTLRAGGAIYQNNGDIFGSVWGNSWLSLWINNNFVADVQLGAGTSVTTWNNAGSWPNTPGYVVTSVWKDAQGENIDGINYAPLQKRVGNQWYTVQGGTA
complement(2853485..2854090)       PHAGE_Salmon_Fels_2_NC_010463: P2 gpI-like baseplate assembly protein; STU288_13690; phage(gi169936031)     1.49e-149           SalmonellaentericasubspentericaserovarTyphimuriumstrU288MNSLLPPGSSPLERRLAQTCSGISDLQVSLRDLWNPATCPIRFLPYLAWAFSVDRWDESWTESVKRRVVQDAFYIHQHKGTTSAVRRVVEPFGFLIRINEWWQTGETPGTFRLDIGVQDHGITEDTYLELERLISDAKPCSRHMTGMSINMQTSGPYWVGAASYLGEEITVYPYINETIVSGGTAHEGGAVHVIDTMRVNP
complement(2854083..2854991)       PHAGE_Salmon_Fels_2_NC_010463: baseplate assembly protein; STU288_13695; phage(gi169936032)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrU288MAVIDLSRLPPPQIVDVPDFETLLAERKAAFVALYPVDEQDAVRRTLALESEPVTKLLQESTYREILLRQRINEAAQAVMVAYSMGNDLEQLAANCNVKRLTVVPADNDAVPPVTAVMEDDEALRQRIPAAFEGLSVAGPTGAYEFHARSADGRVADASATSPAPAEVVLTVLSREGDGTAVKDLLDVVEKALNSESVRPVADRLTVRSAEIIPYRVEATIFLYPGPEAEPVMVAAKASLQRYIASQTRLGRDIRRSAIYAALHVEGVQRVELTSPLEDVVLDKTQAASCTEWSVTNGGTDE
complement(2854978..2855337)       PHAGE_Salmon_Fels_2_NC_010463: baseplate wedge subunit; STU288_13700; phage(gi169936033)     1.45e-82            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MTLYIGMSRNDGQALADTDHLRQSVRDILLTPQGSRIARREYGSLLFALIDQPQNPALRLQIMSAVYVALNRWEPRLTLDSITINGNFDGSMVVELTGHSNNGAPVSLSISTGADNGSH
complement(2855334..2855912)       PHAGE_Salmon_Fels_2_NC_010463: P2 gpV-like protein; STU288_13705; phage(gi169936034)     2.64e-139           SalmonellaentericasubspentericaserovarTyphimuriumstrU288MNAQLTEIMRLITNLIRTGTVTEVDRENWLCRVRVGELETNWINWLTLRAGGARTWWCPSPDEQVVVLSMGGNLETAFALPAIYSNQFAPPSDSVDGCVTEYPDGGWFEYEPATGRWHVRGIKSMVIEAADNITLKTGEFVVEADTTRINSEVVINGGVTQGGGAMSSNGVVMDKHGHTGVKSGGDTSGGPV
complement(2855981..2856427)       PHAGE_Salmon_Fels_2_NC_010463: P2 gpS-like tail completion protein; STU288_13710; phage(gi169936035)     2.60e-104           SalmonellaentericasubspentericaserovarTyphimuriumstrU288MDELQKVDDWLTALLANLEPAARSRMMRQLAQQLRRTQQQNIRLQRNPDGSGYEPRRVTARSKKGRIKRQMFAKLRTTKYLKTTASADSASVQFDGKVQRIARVHHYGLRDRVSRKGPEVRYAERRLLGVNEEVETVTRDTLLRWLAG
complement(2856420..2856851)       PHAGE_Salmon_Fels_2_NC_010463: P2 gpR-like tail completion protein; STU288_13715; phage(gi169936036)     1.17e-101           SalmonellaentericasubspentericaserovarTyphimuriumstrU288MNKPQSLRSALNKAVAYVRDNPDKLHLFVDNGSLVATGASSMSWEYRYTLNVVIEDFSGDQNLLMAPVLLWLSTSQPDAINNPDLREKLFTFEVDILRNDVCDISMNLQLTERVLVSTDGSVSSVEAVPEPDEPEEMWTVKRG
complement(2856814..2856930)       PHAGE_Salmon_Fels_2_NC_010463: P2 LysC-like protein; STU288_13720; phage(gi169936037)     3.74e-19            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MLDETEAAWAVCADKVDTIIACQERDSEQTAVLTQRPE
complement(2856947..2857375)       PHAGE_Salmon_Fels_2_NC_010463: P2 LysB-like protein; STU288_13725; phage(gi169936038)     4.16e-97            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MNRLLAVVLALVLAALGWQSWRLNNASHTIETQGAVLKSKTQELTKKNSQLIGLSILTETNSREQARLYAAAEQTTALLRSRQHRIEELKRENEDLRRWADTPLPADIIRLRERPALAGGAAYREWLSQSDAVPSGKVSAAQ
complement(2857752..2858261)       PHAGE_Salmon_Fels_2_NC_010463: endolysin; STU288_13740; phage(gi169936041)           3.36e-114           SalmonellaentericasubspentericaserovarTyphimuriumstrU288MNPSIVKRCLVVAVLAIAATLPGFQSLHTSVEGLKLIADYEGCRLQPYQCSAGVWTDGIGNTSGVVPGKTITERQAAQGLITNVLRVERALDKCVVQPMPQKVYDAVVSFAFNVGTGNACSSTLVKLLNQRRWADACHQLPRWVYVKGVFNQGLDNRRAREMTWCLKGV
complement(2858242..2858457)       PHAGE_Salmon_Fels_2_NC_010463: lysis protein; STU288_13745; phage(gi169936042)       1.18e-45            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MTLERISAFITYCIAVLLAWLGDLSLKDASTVGGVLIGVLMLAINWYYKHQSFKLLRGGKISRGEYESFNR
complement(2858461..2858664)       PHAGE_Salmon_Fels_2_NC_010463: P2 gpX-like tail protein; STU288_13750; phage(gi169936043)     1.50e-44            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MKVRAHQYDTVDALCWRHYGRTQGVTEQVLHANPGLAEYGPFLPHGLQVELPDITASTTAQTVQLWD
complement(2858664..2859128)       PHAGE_Salmon_Fels_2_NC_010463: P2 gpL-like protein; STU288_13755; phage(gi169936044)     1.84e-112           SalmonellaentericasubspentericaserovarTyphimuriumstrU288MKFVAPEQAPEQAEVIKNTPFWPDVDLSEFRSVMRTDGTVTQPRLKQVVLTAISEVNAELYDFRNRQQMLGWRTLAEVPAEMLDGKSERIRHYHNAVFCWARAVLNERYQDYDATASGVKRGEELAEASGDLWRDARWAISRVQDVPHCTVELI
complement(2859222..2859875)       PHAGE_Salmon_Fels_2_NC_010463: terminase endonuclease subunit; STU288_13760; phage(gi169936045)     1.83e-155           SalmonellaentericasubspentericaserovarTyphimuriumstrU288MSLSPARQHRLRIQAEQAAREGGSVRRHASGYDLMLLQLAEDRRRLKGIQSTVKKAEIKVELLPKYSAWAEGVLAAGGAQQDDVLMYVMLWRIDAGDYAGALEIGRHALRHGWVMPLGNRNVQTVLAEEMADAAQSALLAAAGFDADLLLQTLDLTTDLDMPDQSRARLHKAIGAVLSESNPASALNHLTHALQLDPRCGVKKEKQQLERRLRNDSR
complement(2859879..2860961)       PHAGE_Salmon_Fels_2_NC_010463: capsid protein; STU288_13765; phage(gi169936046)      0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrU288MKKKTRFAFNAYLQQLARLNSVEVEELSSKFTVEPSVQQTLEDQIQQSAAFLTLINITPVTEQSGQLLGLGVGSTIAGTTDTTTKEREPTDPTLMEDVEYKCEQTNFDTVLTYAKLDLWAKFQDFQVRIRNAIVKRQALDRIMIGFNGVKRAKTSNRAENPLLQDVNKGWLQKIREDAPDHVMGSKTAEDGTTTAEPVKVGPGGKYVNLDAVVMDAVNELIDVEYQDDDELVVVCGRELLSDKYFPLVNKEQDNSEKIAADMIISQKRMGGLQAVRAPFFPANALLITRLDNLSIYWQEDTRRRSVIDNPKRDRIENFESVNEAYVVEDYRCAALVENIEMSDFTPPAAPVVAAESGNGE
complement(2860978..2861811)       PHAGE_Salmon_Fels_2_NC_010463: capsid-scaffolding protein; STU288_13770; phage(gi169936047)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrU288MTVKAKRFRIGVEGATTDGREIQREWLVQMAASYNPTVYTALINLEHIKSYLPESTFNRYGRVTGLVAEEIQDGPLAGKMALYADIEPTDALVELVKKGQKLFTSMEVSTKFADTGKAYLVGLGATDDPASLGTEMLAFSASAAHNPLANRKQNPENLFSEAVETLIELEEVQDEKPSLFARVTALFTKKEQTDEARFSDVHKAVELVASEQQNLSERTDKSLSEQDKRLSELESSLQEQLAAFAELEQKLSSEDSRKDYRQRAPGGDAPAGTLTNC
2861954..2863720                   PHAGE_Salmon_Fels_2_NC_010463: terminase ATPase subunit; STU288_13775; phage(gi169936048)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrU288MNTTLTPADLDPRRQAMLLYFQGYRVARIAEMLGEKVATVHSWKKRDKWGDYGPLDQMQLTTAARYCQLIMKEHKEGKDFKEIDLLARQSERHARIGKFNNGGNEADLNPNVANRNKGPRRQPEKNVFTDEQIEKLEEVFHASMFDYQRHWFEAGKTNRIRNLLKSRQIGATFYFAREALIDALLTGRNQIFLSASKAQAHVFKQYIIDFAKEVDVELKGDPMVLPNGAALYFLGTNARTAQSYHGNLYLDEYFWIPKFQELRKVASGMAIHKKWRQTYFSTPSSLTHSAYPFWSGALFNRGRAKADKVDIDLTHSNLARGLLCPDGQYRQIVTVEDAVRGGCNLFDLDQLRMEYSPDEYQNLLMCEFIDDLASVFPLSELQACMVDSWEVWTDFQALALRPFGWREVWIGYDPAKGTQNGDSAGCVVMAPPTVPGGKFRILERHQWRGMDFRAQADAIKKLTQQYNVTYIGIDSTGVGHGVYENVKAFFPAVREFVYNPNVKNALVLKAYDIISHRRLEFDAGHTDIAQSFMAIRRATTASGNRPTYEASRSEEASHADLAWATMHALFNEPLQGESANTSNIVEIF
2863720..2864760                   PHAGE_Salmon_Fels_2_NC_010463: portal vertex protein; STU288_13780; phage(gi169936049)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrU288MSELEALTSSTPTEATVPKNAGVTAEAFSFGDPIPVLDRRELLDYVECVQMDRWYEPPVSFDGLARTYRAAVHHSSPIAVKRNILTSTFIPHPLLSQQAFSRFVQDYLVFGNAYLEKRTNRLGGILSLEPSLAKYTRRGIDLDTYWFVQYGMTTQPYEFTKGSIFHLMEPDLNQEIYGLPEYLSAIPSALLNESATLFRRKYYINGSHAGFIMYMTDAAQNQEDVNNIRQAMKSAKGPGNFRNLFMYSPNGKKDGIQIIPLSEVAAKDEFLNIKNVSRDDMMAAHRVPPQMMGIIPNNTGGFGDVEKASRVFVRNELIPLQERMKEINEWIGHEVIKFKAYILEVI
complement(2864846..2866543)       PHAGE_Salmon_Fels_2_NC_010463: hypothetical protein; STU288_13785; phage(gi169936050)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrU288MHRIVKAHLDSFVKSYGIENHEEDVQFELFCNKAMLSSRISMDFEIDDVTTGAGDDGMDGIAIIIDEELCISPEDASSIFSSQRKNHDVDIVFIQSKRSESFDLGDFLKFKASVFRFIDESPYSCLDDIQKNAHEVFDVVIKNVPKIRGGRPSFTAKYVATGIYKSPRELESARKLFIKEIEELGYFCNVSVEFVDRDELTRTWIDTYSVVNAELPLFSNAPLPKINGIEEAYLAVVKAKDFVSNLLMTEEGSLRNHVFVENVRAFLGIDNPVNASIAETIKDRDAASRFPVLNNGITIVSPDVKLQGSILHLENFQIVNGCQTSNVLYECRDSLDDTMMVNLKVVETLNEDVFSELVRATNSQTKVDETQFYSLRPIIKKVEAYFDTYEGQDGRLYLERRERQFIGRDIPAVRVFSVHMAAKCVAAMFFRRPDLSYRYPKRMYELLAEKIFSNDTKEIVFYAACLTLYRLHLLTSNADIPQNIRKYKWHLMAVVCVLIAGKDIPKFGSKKMDIYCNKIITEMTKHGDKIKATFQRAVDIVLSIDDITDDRMKRQAILDEMLAKI
complement(2866811..2867488)       PHAGE_Salmon_Fels_2_NC_010463: hypothetical protein; STU288_13790; phage(gi169936051)     4.52e-163           SalmonellaentericasubspentericaserovarTyphimuriumstrU288MKINNVALTISLAVILTGCVPHASNRNITAIEVVKPAIGQSATAYMGDPIITSATGFKTDVLELGAANGALSSIAAGTYCSEGNGIYRNYHNPQAVALKNLYGQIGNYVDYVSYDAAKNEISPPNGTSYSASEISIKRVPDGLCRVSNSLVKTIEYNGNAGGVMKFTYREFANDMARAAFTTDFSVDSKGSDVIAYKGAKFKVNKADNSSISYTIISGFDKAVTF
complement(2867602..2867835)       PHAGE_Salmon_Fels_2_NC_010463: TumB protein; STU288_13795; phage(gi169936052)        7.13e-50            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MRIEIMIDKEQKISQSTLDALESELYRNLRPLYPKTVIRIRKGSSNGVELTGLQLDEERKQVMKIMQKVWEDDSWLH
complement(2867846..2868034)       PHAGE_Salmon_Fels_2_NC_010463: hypothetical protein; STU288_13800; phage(gi169936053)     3.64e-39            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MQDYFLESLKLQRIDFFLKLIAASECSDEEKGLALQWVSELTDELMAKIRTHEYNRSMDVIN
complement(2868187..2870616)       PHAGE_Salmon_Fels_2_NC_010463: P2 gpA-like protein; STU288_13805; phage(gi169936054)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrU288MAVSKFTLHNAPTTGGSNEAAVVFPWNTPKKAVNPYLDPAEVAPESALSNLIALYAADNEQEQLRRETLSDEVWERYFFNESRDPVQREIEQDRLISHAKTAREQQRFNPDLVIIADVGAQPAHISKPLLERIKYFHSLGRAKAYSRYLRETIRPCLERLERVRDSQVSASFRFMASHDGLEGLLVLPEMNQDQVKRLSTLVAAHMSMCLDAACGDLFVSDDVKPEEIRQAWERVAAEAMRLEVIPPAFEQLRRKKRRRKPVPYELIPPSLARMLCADWWCRKLWQMRCEWREEQLRAVCLVNKKASPYVSYEAVIHKREQRRKSLEFFRSHELINEDGDTLDMEDVVNASNSNPAHRRNEMMACVKGLELIAEMRGDCAVFYTITCPSRFHATLNNGRPNPKWTSATVRQSSDYLVDTFAAFRKAMHKTGLRWYGVRVAEPHHDGTVHWHLLCFMRKKDRRSITALLRKFAIREDREELGTNTGPRFKSELINPRKGTPTSYIAKYISKNIDGRGLAKEISKETGRPLRDSAEHVSAWASLHRVQQFRFFGIPGRQAYRELRLLAGQAARVQGERKAGAPVLDNPRLDAVLAAADAGCFATYIMKQGGVLVPRKHHLVRTAYELNDEPSAYGDHGIRIYGIWSPIAEGKICTHAMKWKKVRKAVDVQEAAADQGACAPWTRGNNCPLAENLNQQEKDKSADGGTRTDITRMDDKELHDYLYSMSKKDRRELAARLRLVKPKRRKDYKQRITDHQHQQLVYELKSRGFDGSEKEVDLLLRGGSIPSGAGLRIFYRNQRLKEDDKWRNQY
complement(2870607..2871464)       PHAGE_Salmon_Fels_2_NC_010463: DNA adenine methylase-like protein; STU288_13810; phage(gi169936055)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrU288MSTILKWAGNKTAIMAELKKHLPEGPRLVEPFAGSCAVMIETDYPHYLVADINPDLINLYQVIKNDVEYFIKEGRYLFEARNDPEAYYKTRQEFNLRHGGAIERALYFLYLNRHGYRGLCRYNLDGYFNVPYGNYKKPYFPENEIRAFAEKAKRATFICASYDETLALLQTGDVVYCDPPYDGTFNGYHTAGFTENDQFHLASILERRSSEGHPVIVSNSDTSLTRSLYRDFTRHRITAKRSMGVAAGDSKTAVEIIATKSACWFGVDLASGPDISVETEVRAWQ
complement(2871461..2871688)       PHAGE_Salmon_Fels_2_NC_010463: DksA-like zinc finger domain containing protein; STU288_13815; phage(gi169936056)     8.71e-50            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MADSMDLVQQRVEEERQRHIHTARNKTPGVSRVLCIDCDAPIPPARRRAIPGVQCCITCQEIAELKGKHYNGGAV
complement(2871688..2871921)       PHAGE_Salmon_Fels_2_NC_010463: hypothetical protein; STU288_13820; phage(gi169936057)     9.61e-49            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MRNIETRITKTGPDDAGLNQLLTDARMEERRGRADLMAARLDSLAAHIVSRQLNHTEAAELLRQEAVKIQNEAQEIH
complement(2871989..2872330)       PHAGE_Salmon_Fels_2_NC_010463: hypothetical protein; STU288_13825; phage(gi169936058)     2.15e-78            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MAIDGPVATVPLSPGKRLDGLNHIAELRAKVFGLNIESELERFIEDMRDQRDVNNKQNERALAAIFYMAKIPAERHSVNISDLTTDEKRELIKAMNHFRAVVSLFPKRLTMPN
2872550..2873008                   hypothetical protein; STU288_13830                                                   N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrU288MTKQSSEYFQLHYCYYLELMTATLHGRADKLMTAIQIISGTAVIADTGLEWVFALPVVVIATIQLVWQPAIISERASVQSRQYGELLYAGDELTPELIAQKLKTLHHSDSAPFGSLLNPAYKRAAIACGRSDDTKLSFQEKLFAWFAGCLPR
complement(2872956..2873189)       PHAGE_Salmon_Fels_2_NC_010463: hypothetical protein; STU288_13835; phage(gi169936060)     1.49e-51            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MLTREPSFASLLVKQSPAMHYGHGWIYLPCGKKWHPCIELSPRQQAVRGIGKKRLLQRLSFNVAGILQTRRKAFPGS
complement(2873197..2873706)       PHAGE_Salmon_Fels_2_NC_010463: bacteriophage regulatory protein CII; STU288_13840; phage(gi169936061)     4.83e-124           SalmonellaentericasubspentericaserovarTyphimuriumstrU288MFDYKISKHPHFDEACRVFALRHNMAKLAERAGMKVQTLRNKLNPEQPHQLTPSEIWLLTDLTEDSTLVDGFLAQIHCLPCVPMNEVAKEKLPHYVMSATAEIGRIAAGAVSGDVKTTAGRRDVISSINSVTRLMALAAVSIQARLQANPAMASAVDTVTGLGASFGLI
complement(2873742..2873981)       PHAGE_Salmon_Fels_2_NC_010463: bacteriophage regulatory protein Ap1; STU288_13845; phage(gi169936062)     1.89e-53            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MSTDISIRVPKEMATPAEFAEWEGISRGSVYQKIHHGQLAKYMVKKEKNKGRVSLRYLMYKTDQVRESLGHSNFRVIVG
2874098..2874730                   PHAGE_Salmon_Fels_2_NC_010463: P2 CI-like protein; STU288_13850; phage(gi169936063)     3.89e-154           SalmonellaentericasubspentericaserovarTyphimuriumstrU288MSLIKAGNDSGGRDAINRLIKAYNFSSRQQLCEHLEVSKSTMANRYLRDSFPAEWVIQCALETGISLLWLATGQGDMYACENEERNLKNETSVTVRPLSKIVAPSIKHVELKNGELQPSDEILLDSRLLDGDSSNSLFVKTATDSFVVDTSVKQVSNGFWLVDMDGVKSIVKIARVPGNKIVVHQDETSFECSVDDIEAIGRAVKVIKSL
2874734..2875759                   PHAGE_Salmon_Fels_2_NC_010463: integrase; STU288_13855; phage(gi169936064)           0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrU288MSIRKQPNGKWLCECYPNGRDGKRVRKQFATKGEAIAFENHTMDEVNKKPWLGEKEDRRHLSEVIDQWHSLYGQTLADPKRLMAKLSIICNGLGDPIASELTAGDFTKYREARLKGEVKNEDGVLMSPVKPRTVNLEQRNLSSVFGTLKKLGHWSAPNPLAGLPTFKIAEGELAFLAPEEIKRLLDACADSQSPSLLMIAKVCLATGARWSEAENLQGHQLSKYRITYTKTKGKKNRTVPISQDLYDELPKNRGKLFTPCRKAFERAVKRAGIELPEGQCTHVLRHTFASHFMMNGGNILVLRDILGHADIKMTMVYAHFAPDHLEDAVTKNPLHNLNWKR
2875877..2875923                   attR                                                                                 N/A                 ATGTAGGAATTTCGGACGCGGGTTCAACTCCCGCCAGCTCCACCAAA
2876088..2877152                   PROPHAGE_Entero_Fels-2: integrase-like protein; STU288_13860; phage(gi16766052)      0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrU288MPNQLKPLTNVEIAGAKPRSTDYELRDGEGLYLLVKTSGRKAWHFEYYHPVTKKRTKTSLGPYPVVTLAMARETRTKYRRLLYQGIDPRQHLAGIAEEKRIQNECTLEKVAEQWLKEKKRTSDLSEDHAKDVWRSLEMHVFPSLGNTPVTEIRPKMLKEHLTPLEEQGILETLRRVISRLNEIFRFAISEELIEFNPADNLVARFKKPKKQNMPALHPSELGRLMLALQNASIRKETRCLIEWELLTWVRPGEAVSARWCDIDMKKAEWRIPDTFMKMNRSHTVPLSKQALRVLQIMEPVSRHRPWVFPSIRKPLEHMHQQTANAALIRMGFGGELVAHGMRSRQDRRRRSFSP
2877166..2877333                   PROPHAGE_Escher_MG1655: CP4-57 prophage; integrase; STU288_13865; phage(gi16130540)     1.13e-10            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MLAHQKEDEIEAAYNRSDYLEQRRPLMQWWGNYVDAARRQALLGAEEPLQIVEGE

#### region 7 ####
complement(4412794..4413522)       PHAGE_Salmon_SJ46_NC_031129: hypothetical protein; STU288_21060; phage(gi100101)     5.91e-39            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MIIVSVLRQSKDFTTKHAQWLHKQLKGYDSVCLTDALKIKGVNTAPLLYDWPGWWAKLELFNPLHPVLGNEDILYIDIDSVIVGDITPLTTMKKITLLNDFSQHGASVAPATGIMFIPAPAKKNVWDEFMKNPEKEINAIRTPPYHGDQGFIGRICQDAERWQNILPGRIISYKANIATPKMIGFNPELYDGTGNGKLPDGASIVCFHGSPRPWNTALPWVPYFSLKNTIQSKVKQYKLSLR
complement(4413719..4413985)       putative inner membrane protein; STU288_21065                                        N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrU288MRLFAVMNFYYIDYLCRPITIAVVIFLFWWRLANEMYIYGSKKQKKTGLWINRKLNSKFGIDIELGAVKRGNKITPIPTLILYIPMKI
complement(4414258..4414713)       PHAGE_Haemop_SuMu_NC_019455: enoyl-CoA hydratase/carnithine racemase-like protein; STU288_21070; phage(gi418489075)     2.04e-28            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MSQTTVWLACYKGRSEHRGIARFADWLTRKVTRGIYSHCELAVAHGGNEYLCYSASFRDRGVRGKIIPLPDDKWDKLPLKATLPEVEVFFRKHNGKRYDWQGALGIALYNRERKDRLFCSEFCAEFLGLNDSWRYSPSHLYALVSSWQYDC
complement(4414710..4415174)       putative cytoplasmic protein; STU288_21075                                           N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrU288MCLNPLEFITTPPPGKFYRLQGNEWVYDEALFVSALESVKAQVIQAIKAHRDDVTADYIVIDGNHFHSDANSRIQQMSLTRMGQAQQIPAGLMWQAKNNGLIELTNDIAAQFETVTMDHDMRLFANAQRHIAAVEALEDIEAVLDYDYSTGWQP
complement(4415320..4417065)       PHAGE_Salmon_SP_004_NC_021774: phage tail fiber protein; STU288_21080; phage(gi526003631)     3.07e-85            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MDNEFYTLLTDRGMAKIASALADKKQLHLQKMAVGDGGGQYYEPIASQTKLRHEVWRGEMNTLTVAPNNPNWLIAELVLPEDVGGWYVREVGVFDDEGELIAIGKFPESYKPLLPGGCGKQVCIRLIMEVSNTTAVTLTVDPSIVLATRDYVDTRLDEHEHSTNHPDATLTQKGFTQLSNATDSDDETKAATPKAVKAAMAEARNHTHTWNQITGVPDGTLTQKGIVKLNSATDSTSTTEAATPSAVKAAMDKANAAAPANHTHVWNQVTGVPDGTLAQKGIVKLNNATDSTSTTEAATPSAVKAAMDKASAAAPARHTHAWGQITGAPDGTLTQKGIVKLNNATDSTSTTEAATPSAVKAAYDKASAAAPANHSHYQFFTANGTFTVPDGVTQVFVEMLGGGGGGGGGGHTSNTDGLLYCSGGNAGKSGEPEIAIVPVIAGNNYPVTVGAGGASGAGGVLPNSNPTGNVVQVGQAGNSGINGGNSIFIDVVANGGAGGAGGIVQSRIPLSGFNQLDSISGGNAETTFFGKGGTGAVLSNGSNASGYGAGGGGGASVNSLNIALSGYAGGRGSSGFVKISW
complement(4417068..4417700)       PHAGE_Burkho_BcepMu_NC_005882: gp51; STU288_21085; phage(gi48696961)                 5.01e-32            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MDKLLLPPPLASDERFSILANIAAERFAQIDLTALLVYLVDIVDASALPSLAEQFHVQGLEGWLFAANEQEKRELIKQAIELHKYKGTPWAVRRVLEILSLPGTISEWFEYGGKAYFFKVEIKLINQGMDENLFNNLVDLIHEYKNVRSKLEALIVWIINQSAIPVIGSALYGGEITTVLPFQVLEVQQTKPIYFGTGQWSLEITSIYPE
complement(4417693..4418808)       PHAGE_Burkho_BcepMu_NC_005882: gp50; STU288_21090; phage(gi48696960)                 2.24e-132           SalmonellaentericasubspentericaserovarTyphimuriumstrU288MAIAEPDFIDRDPAQITSEMIAQYEEASGKKLYPAQAERLLIDLFAYRENLVRIAIQEAAKQNLVAYSRAPMLDYLGELVGVHRLPAQAAKTTLQFSVTQAAKSNLVIPQGTRASASDSVMFATDEDVLLPAGSLSVAVTATCVVTGEPGNNWQPAQISALVDRVGNYDISVTNLTASSGGCGEENDDALRKRIQLAPESFSNAGSYGAYRFHTLSVSQSIIDVAVLGPDEGLAEGCVELYPLTLNGLPGPELLAQIEREVSKEKKRPLTDKVSAKCSPRVAYQISARLTLFTTADQETTLAAAREAINTWTRSRQTRLGQDIVPNQIIKVLQVDGVYDVALDMPAKKVLQAHEWAECTAIDVTIAGVSDG
complement(4418799..4419158)       PHAGE_Burkho_BcepMu_NC_005882: gp49; STU288_21095; phage(gi48696959)                 3.12e-43            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MNTKTRPSTLHWQPALQRPEEYVCGLDDIHQAIHIILRTPRGSDPHRPLFGSNLWRYIDYPIERAIPHVVRESVEAIRMWEPRCRLLKVTPTIDGEHLTLRVQWRAADGVINSTEVLWR
4419219..4419341                   hypothetical protein; STU288_21100                                                   N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrU288MAGSECVLPGGASALTGPVLMHILLNGEDRVLRKVKMKLL
complement(4419322..4420869)       PHAGE_Salmon_epsilon34_NC_011976: GtrC; putative membrane protein; STU288_21105; phage(gi221328637)     6.53e-62            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MNTMLKILPKTAMILLAFLAIFLIEWYTPIHSDDYRYYLLGISPESHFHHYMTWSGRIIADYTSALILYTRSQLVYSISAAVSTLVFCYFIVKTPSGTLRWNKSDYLLFPLIFFTYWISNPNLGQTTFWIVGAANYLWTNLFVVAWLFFFYTITIKNSKAISPWVALLSFMAGCSNESVSPFVSLISVLAIAYELWQNKSVSRNKIVYSLCAIAGSCVLILSPGNFIRASGKEFWYGRPIFERIFIHLTERVHNHLALIWIAYVVLLLLVLLVIFNKQIRAKIDKTSLICAALVVCIGIGTSLIMFASPSYPDRVMNGTFMFFLLAISFIAYALLKSGVKAGVVGVTAVTVLCGIVFLWSYSLMLNGYKKTAGQEIVRQKIITKEIAAGKQKFIIPDYYFVKLQNSGGHFGLFHDPAVYGEYYHVQAIFKKKVNFDYSVIANGAKHSLSNETTAYSNTRGDFAIISREQLTGSITLSVNGRQKTIPVEKMKHAEINDEFWYYASVDKGEITAISF
complement(4420869..4421798)       PHAGE_Entero_SfV_NC_003444: bactoprenol glucosyltransferase; STU288_21110; phage(gi19549012)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrU288MKISLVVPVFNEEDAIPIFYKTVREYSSLKPYNVEIIFVNDGSHDATESIISALAVADPLVVPISFTRNFGKEPALFAGLDHATGDVVIPIDVDLQDPIEVIPHLINKWQAGAEMVLAKRIDRSTDGHLKRKSAEWFYRLHNKISTPKIEENVGDFRLMSREIVENIKLLPERNLFMKGILSWVGGQTDVVEYARAERVAGNSKFNGWKLWNLALEGITSFSTFPLRIWMYIGVSVSALSLIYAMWMIIDKLMWGNPVPGYPSLMTAILFLGGIQLIGIGIMGEYIGRVYTEVKQRPRYIVKNKKTMME
complement(4421795..4422157)       PHAGE_Entero_SfV_NC_003444: putative flippase; STU288_21115; phage(gi19549013)       2.31e-59            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MIKLFIKYVSIGVLNTALHWAIFALCVYGFQTSQALANVAGFAVAVSFSFFANARFTFGASVSTGRYLLYVGFMGVLSAVVGWTGDKCAMPPIFTLIVFSAISLICGFLYSRFIVFRNEK
complement(4422485..4423207)       PHAGE_Burkho_BcepMu_NC_005882: gp48; STU288_21120; phage(gi48696958)                 2.85e-38            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MKGVTRQTGIISDIDEAVVRVRVTLPECDNLRSNWLAVLQRNTQDNKDYWLPDIGEQVEVSLDDNGEDGVVLGAVYSSVDTAPLASRDKRYVQFSDGAAFEYDRALHQLTVNGGIEKIVIEVKEHTQLTSPQVEVRAQHVTVISETVDVAATSVGVKAVDVNVEAPHTGIKALNVTVDAPLSTFTGDVTVMKKLTWLGGMAGSGGVGNSAVITGNVNVLGNVNASGTLMDNGGNSNHHSH
complement(4423217..4424260)       PHAGE_Burkho_BcepMu_NC_005882: tail protein; STU288_21125; phage(gi48696957)         1.76e-101           SalmonellaentericasubspentericaserovarTyphimuriumstrU288MAEITVSGGVFATLTPIFTLWYGHKEITYDIAPYVTSISYSDSIKNESDVIAIALEDSTGRWVNEWYPGKGDTLALRLGYQGEDLLDCGIYVIDKIDISAPPSTVNIDGIATSVSKALRTKNSQGFEETTLSAIASRIAQKHGLTLAGKIAPLTIDRVTQYAETDVAFLKRLASEYGYTVKVTATELIFSHLPTLRCLAPVKTLRRTDVSHYTFKDTINRIYKNATVQHQNSKQKELVIYTHDSQEKTSARGAATSADTLKINSRAPDTGAAQAKANAALDSHNEYQQTGTLSLMGCPQLTAGNKIELSDFGVLSGQWLIDKSMHKLTRSGGYTTEIDISRGPATSQ
complement(4424248..4424457)       PHAGE_Burkho_BcepMu_NC_005882: gp46; STU288_21130; phage(gi48696956)                 6.01e-23            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MRYLEHVTTDGERWDNLAWRYYGDALAYERIIAANPHVAIMPVLPSGVRLIIPVISVTQTTPELPPWLR
complement(4424457..4425410)       PHAGE_Burkho_BcepMu_NC_005882: gp45; STU288_21135; phage(gi48696955)                 4.32e-50            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MYAVLGEIEFDVVAYWDEFESTMGVDYTSHARIEGKPGVQFIGDKLDKITLKFNFHSQYCQPTTELNRLREAMTAHQAMALVFGNGDYRGWFVITDLTATHQHTDPYGNVIAQGGSLSLQEYTGDPKSPLLPPAITTQEPNIDEMLDELPDVNDSWFDELLSVVEEGMREAKEMMDEVADAIDDIKKTIAQAKELVKEAKALKEKCGDIVDSLKKTMSSIDALFQQPLDLQTLAGLPKALAAKMQELIDSLPGIRECAGDAGTLIEHAESLFDAITSSVAEATYDSAATLVNQARGTLQTSAPDVSQLAAADITRSL
complement(4425410..4427764)       PHAGE_Burkho_BcepMu_NC_005882: gp44; STU288_21140; phage(gi48696954)                 1.34e-60            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MANDIITQLQARNETLTQAIARYGSLNASTLHTLSFEQTKVTRLTQQLANSALRREENDKQRAGLLEKTQTFAGQLGKLLNVETPDWKLPYEFQGNMVDMAAKGGMDNTARDALSLNIRDWSLDFNQDQKDLQSTAATMIEGGVSALQDLSRYMPDIAKAATASRDSAQSWAQAALATRDKLNIAPDDFRFAQNMLYSVAKSGGGSVAEQTQWINAFAGKTGAQGKEGIAELTATMQIAMKNAPDAGAAAANFDHFLKSAFSKETDSWFARQGVDLQGSLLEHQQNGIGVTEAMTHIVQMQLEKMNPQILDTFRQTMKIEDLSARGDALQAMVEKFNLGAMFGDAQTRDFLAPMLANMDEYRQLKASAMQAAGQHVIDDDFAAKMTSPGEQTKALQLSLNDLWLTVGLELMPAIGELAQSITPLVRQFSAWLRENPALVQGVAKVVSVIWLFNGALNILRLGANLIASPFIRLIDIFLKVKAGLALGGGSRALSVLKSFGNGAKSLTMLLGNGLIKGLRLVGQTFIWLGRALLMNPVGLTITAIAGAAYLLYRYWEPISGFFAGVWERIKTAFDGGIAGVTRLILDWSPLGLFYRAFAGVLDWFGIELPASFSEFGGNILDSLINGILNALPFLSGAIEKIKALIPDWAKSALGISAEMPSVAAAVPGIAGTMVAQQASAPLASGAKAVTTSAKTMASPQPVKTKSAATPPTPAALPGKSGGKPYTLPSRAQSNVQVHFSPQVTVQGSGANAAKDINNVLSLSKRELERMINDVMAQQRRREYA
complement(4427861..4427989)       phage GpE; STU288_21145                                                              N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrU288MALLARWFRFPPSEIDALSVDDFTCWLDEASAQIKHEYDSQA
complement(4427949..4428266)       PHAGE_Burkho_BcepMu_NC_005882: gp41; STU288_21150; phage(gi48696951)                 1.65e-10            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MNEKYTLQFPFTSAAGERIDVLQLRRLKVKDMRAARRASDKPEEWDEPLMAAMTGLVTEDLAEMDLLDYQALQKRFQSMLSMATEPTATVAGNGAAGEVVSLSAQ
complement(4428318..4428842)       PHAGE_Burkho_BcepMu_NC_005882: gp40; STU288_21155; phage(gi48696950)                 5.56e-90            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MAGKIQINRITNANIYLDGNNLLGRASEIKLPDISMIMQEHKALGMVGKIELPAGFDKLEGEIKWNSFYHDVMRKTANPWQAVALQCRSSIDCYNSQGKADQLALVTHMTVMFKKNPLGTFKQNENPEFSSAFGCTYIKQVVDGETLLELDYLANIFRVNGADQLNAYRNNIGG
complement(4428842..4430269)       PHAGE_Burkho_BcepMu_NC_005882: major tail sheath protein; STU288_21160; phage(gi48696949)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrU288MAANYLHGVETIEIETGPRPVKAVKSAVIGLIGTAPCGPVNQPTLCLSESDAAQFGPGLANFTIPQALKAIYDHGAGTVVVINVLNPAVHKSTIPSETVKVDDNGQIQLKHGAVQTMNIGRSTNAGNAYIKGTDYTIDMLTGKITCMGTNLKPGVQAYVNYTYADPTKVTAADIVGAVNTAGDRTGMKLLQDTWNQFGFYAKILIAPVFCTQNSVAVKLIAQAEALGAITYIDAPIGTTFQQVLAGRGPQGAINFNTSSDRARLCYPHVKVYDSATNSEVLEPLSSRAAGLRAKVDLEKGFWWSNSNQEIQGITGVERSLSAMIDDPQTEVNQLNENGITTIFNSYGSGLRLWGNRTAAWPTVTHMRNFENVRRTGDVINESIRYFSQQYMDMPINQALIDALTESVNTWGRKLIADGALLGFECWYDPARNEQTELAAGHLLLSYKFTPPPPLERLTFETEITSEYLVSLESNR
complement(4430259..4430456)       PHAGE_Burkho_BcepMu_NC_005882: gp38; STU288_21165; phage(gi48696948)                 2.20e-11            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MKYIYSGPASGVTLADGQEVLLWPNSEISLPEDNEWVITMIARRHLVPVVTQEVETNEEEIVHGS
complement(4430453..4430908)       PHAGE_Burkho_BcepMu_NC_005882: gp37; STU288_21170; phage(gi48696947)                 2.66e-15            SalmonellaentericasubspentericaserovarTyphimuriumstrU288METLSVIHTVANRLRELNPDMDIHISSTDAKVYIPTGQQVTVLIHYCGSVFAEPENTDATVQKQLIRISATVIVPQISDAINALDRLRRSLGGIELPDCDRPLWLESEKYIGDAANFCRYALDMTASTLFIAEQESKDSPLLTIVNYEEIQ
complement(4431068..4431382)       PHAGE_Burkho_BcepMu_NC_005882: gp25; STU288_21175; phage(gi48696935)                 1.36e-29            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MKLSIDFWEVISLLLSFVGLMFAAGKLLLAQIEKRLNERFEALEAARRESEAGWSRLEREFLEFRADLPLHYVRREDYLRGQAVLEAKLDALYSKIELIQRGNH
complement(4431395..4432000)       PHAGE_Burkho_BcepMu_NC_005882: gp22; STU288_21180; phage(gi48696932)                 1.05e-67            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MRYQYVCLVCAMTFLSADAAEPPRASLQWRNEVIRTAREIWGLNAPVADFAGQLHQESGWAPDALSPAGAQGMAQFMPATAKWVSQLYPELHENKPFNPAWAIRALVQYDRQLWKSVLAKNSCQRMAFTLSAYNGGQGWVNRDKKLAAAKGLDASIWFEHVERVNAGRSAANWRENRHYPKAILYQHAPRYLQWGRASCIH
complement(4432003..4432290)       PHAGE_Burkho_BcepMu_NC_005882: gp21; STU288_21185; phage(gi48696931)                 3.36e-14            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MRKIIVPRLSGWLVASVVLFALIGWTSSAQIPVVIYKLSLVSLSAVLGYWLDRSLFPWARPDSFCPWEESLCCAAAMIRRAIIVAAICLAVALGL
4432866..4433213                   PHAGE_Burkho_BcepMu_NC_005882: gp01; STU288_21190; phage(gi48696911)                 2.19e-30            SalmonellaentericasubspentericaserovarTyphimuriumstrU288MIQKSKEMVRLPEIINDLAFHASQVLIESMNIDSASAENAGQAIADRMMRNWGGQSIYFPKGISGRASERDYQIYSECDGRNYAELAKKYNLTLQWIYKIVKRVHTEKQHQRRML
