gi|488766820|ref|NC_021181.1|  Lactobacillus acidophilus La-14, complete genome. 1991830, gc%: 34.71%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
733010..733023                     attL                                                                                 N/A                 AAGAAGATAAGCAA
complement(745460..746956)         PHAGE_Lactoc_bIL310_NC_002669: helicase; LA14_0781; phage(gi13095886)                2.76e-57            LactobacillusacidophilusLa14MENITPKLDQKLVDEFNNSPISLTYLKSILRNDGHERRQLLKDKSDKKDKNIILPMRTVTNILEYHIIWAVLGNDKEDWQKSALYFYNTESGIYEKDSLLIEELINTVEPQITERNIKEVKSKLRIESKRLFLTNDPNLYALGNGIFDAKKHKLLAYSPKCVFTSKIAVNYNPNAQEPRFDNWSFSKWINEDIAENKTDKIKLIWQTIKAVVNSNYSYHSAVFLIDSKKGSAGKGTFEALLENIAGPNNYATIKLNQFEKAPILATIVNKPLVIGDDNDPNRAVDSSENFKSASTGDPIVINDKFEKAYSYKPTCLIVQSLNALPVFKDNTDATYRRIRVIKFNKKYIENAKNRRVKDEYISNKELLEWIVKKAIDVKIDGVMIRTQESNEILKENQIDSDSFLQFTNDIIVPTTNGYRFKDDTYQAYKKWFEITGHQFGLETYRGFNKRMREDIGLKQSRKMRNGRKMDVWLNIQLKTDSGNLNDMDLKDLNGRENN
complement(747074..747298)         PHAGE_Strept_mu1/6_NC_007967: hypothetical protein; LA14_0782; phage(gi93007417)     2.93e-06            LactobacillusacidophilusLa14MQSSKPYLNRKEIAKYFGVADSTITYWASLGMPVANIDGRKLYGKASITAWLASHEMPSQKQNKKPVTMGVVKD
complement(747371..747595)         hypothetical protein; LA14_0783                                                      N/A                 LactobacillusacidophilusLa14MNNEIKLHQALYEMKAVAEQLYPLYKALTDEIEQLTEDDPNDPITTKKTLKYLSEDVFDLGTRLIDNAKSIEKE
complement(747599..747982)         hypothetical protein; LA14_0784                                                      N/A                 LactobacillusacidophilusLa14MNSKLVIDMQRDLRAHGINLSLEQTYQHLLKANFIDAEGEPTEWAIKNGYVGVEYSYPQGMPTQDESDILTVLGYLPQSAIHHNDCPNLSGIDKEPLKKAIKQALHDDAISINGRKKWKNVLLDLEA
complement(747986..748204)         hypothetical protein; LA14_0785                                                      N/A                 LactobacillusacidophilusLa14MTNYSSDGSNVVDRWYKDGYLYCAFVDGTIMEYGRNKIPERYIEVMRNELAQTVYDLQGGKYDFDDFEPEEA
complement(748197..748403)         hypothetical protein; LA14_0786                                                      N/A                 LactobacillusacidophilusLa14MSKEYLTLKEAMSYMGFTTYDSLRKVIKLGLPVIKFGNSKRISKTAIDDFMQSHTAVVHPTKELVNND
748538..749089                     PHAGE_Lactoc_bIL309_NC_002668: Orf32; LA14_0787; phage(gi13095837)                   2.30e-10            LactobacillusacidophilusLa14MNRIREIRENKKLSLKKTTELLKSNDLLTLTPDALAKYERGDRQPNEPTWQALANFFNVSVDYLKGHGYSKEHIYKCLDNAYKEPYTKDYEIEPPFTNPVLSAKEEIEKYCEQNKISIPKDTDLDFWKTNFNFIFNDKSVNRLLTTKDKYSDSDIKELIINAIFFASLSPETKRALNLMKHNS
749255..750325                     PHAGE_Strept_T12_NC_028700: site-specific recombinase; LA14_0788; phage(gi966201482)     8.57e-60            LactobacillusacidophilusLa14MNNDIKEYTTPSGKKRYGFNLYVGVDETTGHSIQIRKQGYKSKKEAQEAYLNYQLKIIKGEYIPESKGHITFNKLYEMWLKLYRETVKTSTYATTTRYFEDHILKQLGSKYIDKLTVLDCQKAVNIWFNDAPKTYKRFMRYTNNVLNYGINNLELISKNPMNKVIPPKAKNEPKPFTDFYSKDELNTFLRNAKEYNFKYFVFFRLLAYSGMRKGEALALKWSDINFKDNTISINKDVTVGLNNELYEDTPKTENSFRTLDMDATTMEYLKEWRLMQQKTMLELGYNFLNIDNLLFPTINNGYLSMSKPRQWNVAICKKYDLRRIKIHGFRHTHASLLFEAGASMNEVKARLGLTRP
complement(750573..751925)         putative amino acid ligase found clustered with an amidotransferase; LA14_0789       N/A                 LactobacillusacidophilusLa14MSFKSGIAKVAGKSSYWFLHNVLKGGTSFPGKFAMKIDPNVLNSLAKGYETVIVTGTNGKTMTTALIVEALKKKYGDVLTNPSGSNMQQGIVTAFLAHKNKHVKRKIAVLEVDEANVKMVTKLLHPSVFVLTNIFRDQMDRYGEIYTTYEKIVDGIKLAPDATIIANGDASIFSSVDLPNKKIFYGFKLPDDKKENDFKAPVNTDGVLCPKCDHILHYHERIYANLGDFFCPNCGYHRPDLTFTVNKILEQTPNSVKFQMGNKDYSINIGGTYNIYNALAAYSVARHFGLTEAEVAQAFAENKRIFGRQELIHYGGKDIDLILVKNPVGLDEVLHMLNTEKDDYSLVALLNANHADGIDTSWIWDADFEGLDRSKIKKVLVGGQRWHDMGFRLEIAGFDPGKMSTNPDDDSLIEEIKKLPTKKVYILSTYTAMLALRKKMAEKKIIKAGM
752073..752672                     PHAGE_Lactob_Lb338_1_NC_012530: thymidine kinase; LA14_0790; phage(gi226377693)      1.27e-62            LactobacillusacidophilusLa14MAQLFFRYGAMSSGKTIEILKVAHNYEAQGRKIALMTSGLDNRSGVGTVASRIGIHRKAIPITEEMDLFEYIKEMNNHDLADGDGKLACVLIDEAQFLKRHHVLECAKIVDEFNIPVMTFGLKNDFQNHLFEGSENLLIFADKIEEMKTICHYCGHKATMNLRINNGKPVYEGEQVQIGGDESYYPVCRYHYFHPNVVR
752688..753773                     PHAGE_Mycoba_Tonenili_NC_031080: baseplate wedge subunit; LA14_0791; phage(gi100201)     1.07e-05            LactobacillusacidophilusLa14MDKVMAQLESLVAHYEELQEMMADPEVINDTKRYMEISKEEADLREVVQKYKKYKENKKEIEDNKEIISNETDSDLIEMAKEENAELEKEIPELEDQIKILMLPKDPNDDKDIIMEIRGAAGGDEASLFAGDLLRMYEKYAERQNWNVSMIDSEPTEVGGYKRVAIMITGDKVYSKLKYENGAHRVQRIPVTESQGRVHTSTATVAVMPEYEQVDIDIDPKDIRVDVYRSSGAGGQHINKTSSAVRMTHLPTGIVVAMQDQRSQQQNREKAMQILKSRVYDYYESQNQAQYDAKRKNAVGTGDRSERIRTYNYPQNRVTDHRIGLTLNKLDRVMNGELDEIIDALILYNQTKQLEELADNA
763972..763985                     attR                                                                                 N/A                 AAGAAGATAAGCAA

#### region 2 ####
863948..863965                     attL                                                                                 N/A                 TAAAAACAAAATAAAAAG
complement(870706..871656)         PHAGE_Lactob_Sha1_NC_019489: phage integrase; LA14_0916; phage(gi418489824)          1.12e-84            LactobacillusacidophilusLa14MEVAKDQQQISDANPVFADYFKSWYGTYKIPGKSRTTVVRYETIYKKLNAYYGKAKLAKVTRKSYQIFMNEYGKKHAKDTVYKTNGSIRSCVRDGVADGIIQKDFTQKINLTWNSERTRKIDYLNYEEIQSLKNSLLHNIKHTYISRYMILTALYTGMRPGEIAVLTWSDIDFKNQTININKSYNHDKGRVDNYDSSEIDKSTKNTNSVRIIKVDKKFLDILSQLKQNDHEKIFIGKDGTIPTSNAVNKVWRKQLEKLNIDKPSFHFHSVRHTHVALLPFKGVPLYAISKRLGHANMSTTAKKYAYMLDELKQQVR
complement(871876..872076)         hypothetical protein; LA14_0917                                                      N/A                 LactobacillusacidophilusLa14MGPMRTLTVAIDWILIILFVISIILLIYALVKKNKKMAKYAGIAAAIIFILLFIAMRFALTVKPGQ
complement(872079..872732)         PHAGE_Bacill_vB_BhaS_171_NC_030904: RNA polymerase sigma factor; LA14_0918; phage(gi100049)     7.77e-08            LactobacillusacidophilusLa14MFTYLLITIFGIGLLIWAFWYDKNMFKPEKKKNGKMTKPLHTRWYFWVLVVFSIVGGIGNMLGLGADDDDSDNNSAQTVQTSKKAKQSKAENHSKAKKSGTKKSKEISDEEKEAAALLLLRKNFKGKAKVWYDSDNKAFMIQPTGTEFKEELLDIIATQDTSDWKDLTDSMDSLSRSLYKNLQLADFVSIVNPDNPDKVLYSSLNGHSEYDFLKDDE
complement(873261..873599)         PHAGE_Lactob_Lj965_NC_005355: putative repressor; LA14_0919; phage(gi41179224)       3.34e-34            LactobacillusacidophilusLa14MTNQTNLAQKITNYREAQDMTQAELADKSGIERTALNKIEKGTRKVSSDELKAIALALNISADTLLDLNGSELTWADLGMPYGGEIPDELKDTYADIARGYFKRHPEYLNKN
873763..873966                     PHAGE_Lactob_Lj965_NC_005355: putative cro repressor; LA14_0920; phage(gi41179225)     5.98e-23            LactobacillusacidophilusLa14MKKEINLALIRERRLKRGFSNEDMAKSLGLASSDKYFRREHGIYKFQASELPALSKKLGIPLEKFFI
874226..875617                     amino acid permease domain protein; LA14_0921                                        N/A                 LactobacillusacidophilusLa14MGKKNKVPQLSRSMTAGQMEMISLGGAIGVGLFMGSTSTIKWTGPSVLLAYMFVGLILYIVMRALGEMLYINPGTGSFADYATEYVHPLAGYLAEWANVFEYIVVGMSEVVAATEYLKYWWPNISALWSGVIIIAFLLLANLASAKAYASLEFWFAMIKVITIILMIILGFIVIFFGVGNGGKPIGFSNLWAHGGFFTGGVKGFFFSMSIIVGSYEGIELLGISAGEVANPQKAIVKSVKSVLLRILIFYVGAIFVIVTIYPWNKLSSLGSPFVTTFAKVGITAAASIINFVVLTAALSGANSGIYSSSRMLFKLSHDNEAPSVFKHISKRIVPDRAIMGISGGIFIGFILNIIASQFNHSASDLFVIVFSSSVLPGMIPWFVILLAELRFRRHNQDMMKDHPFKLPLYPFSNYFAFLMLLVIVIFMFINPDTRISVITGALVLIVATIVYLVRHKDEFSKNN
875745..876701                     PHAGE_Staphy_SPbeta_like_NC_029119: thymidylate synthase; LA14_0922; phage(gi985761245)     4.85e-144           LactobacillusacidophilusLa14MAILEQPYLDLINKIMIEGHDKNDRTGTGTRSYFGAQMRFDLSKGFPILTTKKVPFGLIKSELLWFLRGDTNIRFLLEHKNHIWDEWAFKNWVNSDEYTGPDMTDFGLRSQSDPEFNKIYQAELKKFDRRILDDENFAKKYGNLGDVYGAQWRHWQKRDGSFIDQIENVIEQIKNNPDSRRMIVTAWNPEDVPTSALPPCHVMFQFYVVDGKISVQLYQRSGDMFLGVPFNIASYALLLNMIARETGLQVGEFIHTLGDAHIYSNHFSQVKEMLSRKPYESPQLWLNPEKKHIEDFDMQDIKLVDYKHHGTIKAPVAV
876711..877214                     PHAGE_Bacill_G_NC_023719: gp125; LA14_0923; phage(gi593777584)                       1.61e-28            LactobacillusacidophilusLa14MIEYVWAEDKEKNIGLNGHLPWYLPADMKHFKEVTINHPIIMGRKTFESFPNLLPKRKHIVLTHNEELKNKYQNNDQVTILPTVEDLHNFVAEHQDERMCAIGGVSIFNALMDQVEVLEKTEIDAIFEADTKMPEIDYSRFNLVAKKHYEPDEKNKYPYTFLTYKLK
890009..890026                     attR                                                                                 N/A                 TAAAAACAAAATAAAAAG
