gi|499074415|ref|NC_021200.1|  Mycobacterium avium subsp. paratuberculosis MAP4, complete genome. [asmbl_id: NC_021200].4829424, gc%: 69.30%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
4258270..4258282                   attL                                                                                 N/A                 AACCTCGAAACCG
4264605..4264847                   PHAGE_Bacill_phBC6A52: DNA integration/recombination/invertion protein; MAP4_3929; phage(gi31415821)     1e-04               MSPQQSFRSLRYTYASLCLAARIRPIDIAELMGHRDVKTTLTVYAHLINTDDHTGNMAALGSLAAPLQKPNYGNVIPLHG
complement(4264882..4265820)       hypothetical protein; MAP4_3930                                                      N/A                 MTSEDHTAVATDTLTRSPSQTDARWQVLRASCWVLLVLTLLAAVVMAVRPSLAAQAGAAQMGFLILFVVVHAWLGYSARGMAAFVAIAGIVAFALEAIGVATGFPFGSYTHHLPGPKPLGVPPVAIASWIIFGWLAWALARVIMRPVPGVAVGGAERFTTPIVATLILGGYDLVYDPIGATAHDWYSYDHPTGALGVPLSNFLGWLLTGWLIFQLVALVEPRFPGSPVTRTRTYWLLPCLFWLSTTTQIFTSLIHPPDGFAVRGGKTIQLADVYESGASAALFTIVLTGIMALVRLYRRQASKTLRSSADEA
4266105..4267403                   putative cytochrome P450 hydroxylase; MAP4_3931                                      N/A                 MRTPVTVGQHRHPFGRDIYVGRSGYVTEDAISIGGVNLADPDTYRAGMPYGAFRKLRERAPVAWHPQKDGSGFWALTGYEEIHAVSRDSATWSSQINGAMFDAPPPGEVPPVMIFMDPPQHTALRKLINKGFTPRQVTRLNEHIVEMAKQIVDDVIERGECEFADDVAGALPSYVIAEMLGIPLEDGRRLYQITEILHTGSVGDSDDERQQAMVEMFQYGVELAVRKRAEPGDDIATSLLHAEVDGQSLSDLEFNLFFMLLIDAGGDTTRNLVAAGILALLEHPQELQRLKADPSLMPTAIEEMLRYTSPVTAFLRTATKDTELRGVPVKAGERVAMFYPSGNRDDSHFADPDRLDVGRAPNPHLAFGGGGTHFCLGANLARVEASAMVPEVLSRMNDLELAGPVERLRSDLINGIRSMPVRFTPGKRLGTA
complement(4267521..4267591)       tRNA                                                                                 N/A                 GCCGATGTAGTTCAATGGCAGAACATCAGCTTCCCAAGCTGAGAACGCGGGTTCGATTCCCGTCATCGGCT
4267757..4268401                   PHAGE_Mycoba_vB_MapS_FF47: tail length tape measure protein; MAP4_3932; phage(gi479336596)     1e-10               MLGVGRHALARKRRKPSATLAAVLAPAAVFFAVSADVHPFAERETAKPVINEPAPCCAEIVTLASTRLSKGFGDGQPVAASRYHTRSRFLPAGVAPERGLQVRTILTARSISAEFPQIHEIGGVRPDPLPWHPLGMAIDVMIPDPESAQGIALGNAIVAYVLQNADRFGIQDAIWRGVYYTPNGAQTSRLGHYDHVHVTTIGGGYPTGDEVYLR
4268431..4269003                   PHAGE_Halovi_HF1: similar to dCTP deaminases; MAP4_3933; phage(gi32453882)           3e-27               MLLSDRDLRAEITAGRLGIEPFDDALVQPSSVDVRLDCMFRVFNNTRYTHIDPAKQQDELTSLVEPQDGEPFVLHPGEFVLGSTLELITLPDDLAGRLEGKSSLGRLGLLTHSTAGFIDPGFSGHITLELSNVANLPITLWPGMKIGQLCILRLTSPAEHPYGSTRVGSKYQGQRGPTPSRSYQNFITST
4269095..4271167                   PHAGE_Human__4: EBNA-1; MAP4_3934; phage(gi82503233)                                 2e-35               MEGFVLNIVLGVSMAPSSIQMVVLEGEYADGATVEEDAIDVTGADDAATASAPDRVISAILGTREGAADAGLQLSSIGVTWTDQLEAAALRDALAARRIDNVMLVSAFLAAAALAQNVGGAMGYERTAVLLVEPDTATLAVVETSDGSIPDVYKQQIRAESYGDAAGQLSAMVAGLEKLESLPGGLLLVGSGVDVAPLKQVLQTTTFLDVSVAEEPETALARGAALAAANAPLFASSTAALAYAQDPGTGAVDQYSLPDYLYVPVGPEPGDDELAYSAVGDEDAESPTVVIEKLFLPEDSEPRRRPVLLVGSGLAVVGISAVLALEIALAIGIRTTGTVALQPTPNQHLIVPTEQAPAPPPVQASAPQPKISVPEPVAAPKPLSLPVAAPLPAAPPPAAPPLPEAPPIPAAPPVVPVPVVVPPVPVPVPVRIPVPDPVSPPQLLAPPRLSVPQPVQPPVRVPQPPSPPQVGGTVPQSPPQHQTPPGEGTPPKPDSPGNYGGGHAPTPGAGGSGGSGGGHVPTPGAGGSGGGHVPTPGAGGSGGGHVPTPGAGGPGGTGGSGGGHVPTPGAGTPGGSGGGHLPIPGAGSTPGGSGGGHLPTPGAGTPGGGLGGFGGGHAPAPGGGLGGFGGGHAPAPGGGLGGFGGGHAPAPGGGLGGFGGGHAPAPGGGLGGSGGGHSGGGLGGLGGGHK
4271356..4272864                   PHAGE_Emilia_86: hypothetical protein EhV364; MAP4_3935; phage(gi73852838)           3e-14               MLPGGRVGQRSKWGRGLEAVAGIVLGVAMTPTKVRMVLVEGESADGVTVDEDDFDVDTRRTALPGTAPDQVISAILGTREGAADSGYQLLSTGVTWTDHVEAAMLRDALIAHKVENVMLVSAFMAAAALTQAVGDATNYARTAMLFVEPYSATMAVVDTADGSVSEVRRRPLPEDEDQAVAELVDMAASAESLPTRPEGLVLVGSGVDVPLIKPALEAATSLELSVPDEPEMALARGAALASANAPLFASSTAALAYALDPGTGEVDPLALAGQSPGLLPGYQPEYHSRIAAQAADAGEGKANVAYSAVPDDDAEAKTLIDLDERARRRKSLLLVSSTLPVIFIAAVVALEIALAISIRPTVALRPSPNENIIAPAPAPPPPAPPVQAQPKITPPRPLAAPHPIAPPPPAPPPIAVPVPVLSPPVFVPPPRVPLARPPAPGHGPFGGHGPFGGGHGPFGGHGPFGGHGPFGGGHGPFGGHGPFGGGHGFGGGHGFGGGHGHR
4272923..4274155                   PHAGE_Antica_nucleopolyhedrovirus: viral capsid associated protein; MAP4_3936; phage(gi116326220)     8e-08               MAAARTLSKSRLTLKSRAPTRLRSHPAQQPTFGRFGGAVDVVLGVSMAPETVRMVLVEGESAGGLTVDQDGFDVTADATPAAAANHVVAAILETRDSATQGGYRLKSSGVSWTDPVKAAALRDALAARKIENVMLVSAVMAAAALAQAMGSATNWARTALLLVEPTSATLAVVDTRNGTVTDVHRHPLPGHDDAALAKLTAMVSGAESMRSRPDGLFLVGSDVDIPAIKPTLEAATSLSVTTPEEPEMALARGASLAAANARLGAPRTVEMAPTHLSSTATAPPAAELAYSADTHDDPASEPTREGRSPKSVATIAAVAVIFVGGIVALAWALAFIRPHADQRPEVGTQVVAPDNPPPPSAAPSPPPAAPVPAAPPPQAPVSPAPSPHSGDHEHWDDWLHRHLGPGVPVP
4274333..4275679                   PHAGE_Saimir_1: large tegument protein; MAP4_3937; phage(gi312162818)                1e-12               MDTVLGVSMAPTAVRMVLVEGENGDGATVDEDNFDVATSEDAATVTASDQVLSAILGTRQGAAEGGYQLASTGVTFTDPVEAAALRDKLAAHKVENVMLVSAFLAAAALAQAVGHRTNYAHTALLYIEPDTATLAVVDSADGSIADVRRQPLPEDDEAAVAELASMVSNAENLETRPDAVFVVGSGIDIPLIKPALEAATTLPLTAPEEPDTALARGAALASAHAPLFASSTAALAYAQDPGTGAINPLAVAPGYFETPADAGADGLAYSAVPDDPDEFFTGTQAAATELVDADYADRSSFKLVGSAVAAIFVIGVVALVVSLAIAIRPTANVRPSPNQNVVVAPTRPAPAAPAPAPVQVAPVPVPEAPAPAPAAPPPPPPAVAPIPVPIPLPIPGLGGPGFGGPPGHGGGDGGGHGGGGFPGFPGGGGHGGGGFPGFGGGHGGFGHH
4275818..4277143                   PHAGE_Acanth_1: hypothetical protein ATCV1_Z571L; MAP4_3938; phage(gi155371518)      2e-33               MRCTVFGTGYLGATHAVGMAELGHDVLGVDIDPGKVAKLAGGDIPFYEPGLRKLLNENLAAGRLRFTTDYDMAAGFADVHFLGVGTPQKKGEYGADLRHVYAVIDELVPRLTTSAVLVGKSTVPVGTAAELNQRAAALAPRGVDVEIAWNPEFLREGYAVQDTLRPDRIVLGIKQDSPRAQAAVRELYGPLLDAGVPFLVTDLQTAELVKVSANAFLATKISFINAISEVCEAAGADVSLLADALGYDPRIGRQFLNAGLGFGGGCLPKDIRAFMARAGELGADQALTFLREVDSINMRRRTRMVELASAACGGSLLGANVAVLGAAFKPESDDVRDSPALNVAGQLQLNGAAVNVYDPKALDNAQRLFPTLNYAVSVEEACERADAVLVLTEWRQFVEMDPDDLADRVRARVVVDGRNCLDVTRWQRAGWRVYRLGAPRP
4289551..4289563                   attR                                                                                 N/A                 AACCTCGAAACCG
