gi|526230592|ref|NC_021871.1|  Salmonella bongori N268-08 plasmid RM1, complete sequence. 89986, gc%: 50.17%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
complement(48842..49063)           PHAGE_Entero_N15_NC_001901: gp50; A464_plas0076; phage(gi9630517)                    1.13e-06            SalmonellabongoriN26808MNYAGHEKLRADVAELANSMSDLRDALNDMEHRYRFDSDVLTERLARQTLFRINALFMAAYNEMLELDTCFKD
complement(49063..49743)           PHAGE_Faecal_FP_Mushu_NC_047913: hypothetical protein; A464_plas0077; phage(gi100026)     1.73e-30            SalmonellabongoriN26808MFRFILGNCVDIMSGFPERAVDFILTDPPYLVGFRDRSGRSIAGDKTDEWLQPACNEMYRVLKKDALMVNFYGWNRVDRFMAAWKSAGFSVVGHLVFTKTYSSKSAYVGYQHECAYILAKGRPALPQDPLPDVLGWKYSGNRHHPTEKPVTSLQPLIESFTHPNAIVLDPFAGSGSTCVAAVQAGRRYIGIELMEQYHKAGITRLSAVQRAMQRPAANDVFYPEAA
complement(50120..50455)           Putative cytoplasmic protein; A464_plas0078                                          N/A                 SalmonellabongoriN26808MNTWLVGLIADVDDTEMIVYYLVSATDLEHAEAGVLEMGGTWWPSLQREDDQHRWEYAAGVVWFNSIILLYDVENSILRGVKFLDAWTVTGSTDTPVLRDEWGNDWRDITR
complement(50452..50919)           Putative cytoplasmic protein; A464_plas0079                                          N/A                 SalmonellabongoriN26808MFRVTCIDLENGEFALYINGHYLSSEDGSGEKLYLGDILERLSRLPGVTTETVERPVPDSDEWNWNDVADSVFPMSVPLSRKMTVAAFKQRLSEYPDDTLCCGTFWLAEDFLALDNSLEAAEIDAAIELAQHNHDANEGVNWSHLKWAINEVKRV
complement(51308..51451)           hypothetical protein; A464_plas0081                                                  N/A                 SalmonellabongoriN26808MAYLLRCLFLYTVLFKMFSVLQVKFYCFPSDNCSAWKNRCQVIHRIS
51450..51872                       PHAGE_Cronob_ENT39118_NC_019934: protein umuD; A464_plas0080; phage(gi431811072)     6.51e-25            SalmonellabongoriN26808MLLLVAPEQEPVQSTAPLFTERCPAGFPSPAADYTEEELDLNAYCIRRPAATFFVRAIGDSMKEMGLHSGDLMVVDKAEKPMQGDIVITETDGEFTVKRLQLKPRIALLPMTPAYPTLYPEELQIFGVVTAFIHKTRSTD
51872..52756                       PHAGE_Cronob_ENT39118_NC_019934: DNA polymerase; A464_plas0082; phage(gi431811050)     5.47e-112           SalmonellabongoriN26808MFALADVNSFYTSCEKVFRPDLRDRPVVVLSNNDGCVIARSAEAKLLSLQPVEEIWGVGRRISKKPNTLGITTALQQARTNPTFIRKNFNVVLKRTVQELNGESCISLEDAPPPKQQIVCSRSFGERITTYEAMRQAVCQYAERAAEKLRGERQFCRHIAVFVKTSPFAVTEPYHGNLASEKLLIPTQDTRDIIAAAVRALDRIWVDGHRYAKAGCMLNDFTPTGVSQLNLFDEVQPRERSEQLMQVLDGINHSGKGKIWFASRGIAPEWQMKMELLSPAYTTRWADIPAAKLT
complement(52838..53812)           PHAGE_Escher_RCS47_NC_042128: portal protein; A464_plas0083; phage(gi100069)         3.58e-109           SalmonellabongoriN26808MSNERRKTIGRQLNTQASMVEMTDPQRSQVFTLKTGRKITFRFVRVPASDVESKTFVNQETNGRDQLALTRESLKSIIQTIKFQQFFPCIGIQQGERIEILDGSRRRASAIYIRTGLDVMVANELLSADEARHLAKDIQTAKEHNLREIGLRLMALKESGFNQKEIAELEGLSQAKVTRALQAAAVPQELISLFPVQSELSFSDYKILLEVNEKLSEKGLTSEGLIQSVSDQHDAILSDYERPDDEQKASILKLISQASQALIAPPPKEKSVISALWTFEEKDKFARKRVKGRTLTYEFSRMSKVVQDELDKAINEVLERNLSQ
complement(53812..55017)           PHAGE_Escher_RCS47_NC_042128: terminase large subunit; A464_plas0084; phage(gi100070)     0.0                 SalmonellabongoriN26808MENIEQLRKVATRAGKLLTSLSESIRQQKEELKLTEFYQEYSKAALYKLPKLSKGSVEYAVAEMEASGYIFKKKPSGNTMKYAMTIQNVIDLYFHRKVPKYRDRFDKAFTIFVCNLKGGGSKTVSTASLSHAFRAHPQLLFEDLRILAIDFDPQASLTMFLSHENSVGLVENTAAQAMLQNVSREELLSDFIVPSIIPGVDVIPASIDDAFLAEGWKGLCEEHLPGQNIHAVLKENIIDKLRYDYDFIFLDSGPHLDAFLKNCIGAADLMLTPLPPATVDFHSSLKFVASLPALIDSIEQDGHTCNLIGNVGFMSKILNKSDHKICHSQAKEVFGADMLDMVLPRLDGFERCGETFDTVISANPATYDGSTEALKSAKSAAEDFAKAVFDRIEFIRTNGGM
55444..56373                       PROPHAGE_Escher_MG1655: predicted transposase; A464_plas0085; phage(gi16131287)      6.46e-113           SalmonellabongoriN26808MKKKNTTPTPHDATFRQFLTQPDIARDFMELHLPAELRAICDLSTLKLESGSFVEDDLRQYFSDVLYSLKTTAGDGYIHVLVEHQSTPDKHMAFRLIRYAVAAMQRHLEAGHKKLPLVIPVLFYTGKRSPYPYSTRWLDEFDDTALAGKLYSSAFPLVDVTVIPDDEIAGHRSMAALTLLQKHIHQRDLAELVDRLAPILLAGYLSSSQVISLVHYIVQAGETADAEAFVRELAQRVPQHGDALMTIAQQLEQKGIEKGIQLGRQEGRSEGEREATLKIARTMLQNGIDRNTVMKMTGLTEDDLAQIRH
