gi|528816716|ref|NC_021902.1|  Salmonella enterica subsp. enterica serovar Newport str. 4915960, gc%: 52.14%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
complement(523255..523770)         PROPHAGE_Escher_Sakai: putative tail fiber assembly protein; SN31241_5110; phage(gi15834244)     1.65e-35            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MQLRNVTRYYPEHMPFGENIQYFIDENGLDFYNSIDTFKLKYKLCIHPDTKVIHSVSENISTLYPAGFDIVESDSLPYDDIISGKYQFVDNKIIPRTYNEVELTQITNAEKSKKLKLANEKIRPLQDAVDLGIATDEEIQKLGAWKRYRVEINRIDTSNLLDISWPLPPDV
complement(523780..525261)         PHAGE_Entero_P88_NC_026014: tail fiber protein; SN31241_5120; phage(gi744692739)     1.18e-84            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MDNEFYTLLTDWGMAKIASALADKKQIHLQKMAVGDGGGQYYEPTASQTNLRHEVWRGEMNTLTVAPNNPNWLIAELVLPEDVGGWYVREVGVFDDEGELIAIGKFPESYKPLLPGGCGKQVCIRLIMEVSNTTAVTLTVDPSIVLATRDYVDARLDEHEHSTNHPDATLTQKGFTQLSNATDSDDETKAATPKAVKAAMAEARNHTHTWNQITGVPDGTLTQKGIVKLSSATDSTSTTEAATPSAVKAAMDKANAAAPASHTHAWNQITGVPDGTLTQKGIVKLNSATDSTSTTEAATPSAVKAAMDKASAAAPASHTHAWGQITGTPDGTLTQKGIVKLNNATDSTSTTEAATPSAVKAAYDLANGKAAGSHKHAWGDITDVPDGTTAQKGIVKLNSATNSTSTTEAATPSAVKAAYDLAKSKTSATNIYTRTQSDARYVQNVMLGAEVQAPTMAPAGCVITFVDGGDKMECVRYKPLQININGFWRTISG
complement(525264..525896)         PHAGE_Burkho_BcepMu_NC_005882: gp51; SN31241_5130; phage(gi48696961)                 2.26e-31            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MDKLLLPPPLASDERFSILANIAAERFAQIDLTALLVYLVDIVDASALPSLAGQFHVQGLEGWLFAANEQEKRELIKQAIELHKYKGTPWAVRRVLEILSLPGTISEWFEYGGKAYFFKVEIELINQGMDENLFNNLVDLIHEYKNVRSKLEALIVWIINQSAIPVIGSALYGGEITTVLPFQVLEVQQTKPIYFGTGQWSLEITSIYPE
complement(525889..527004)         PHAGE_Burkho_BcepMu_NC_005882: gp50; SN31241_5140; phage(gi48696960)                 7.80e-132           SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MAIAEPDFIDRDPAQITSEMIAQYEEASGKKLYPAQAERLLIDLFAYRENLVRIAIQEAAKQNLVAYSRAPMLDYLGELVGVHRLPAQAAKTTLQFSVTQAAKSNLVIPQGTRASASDSVMFATDEDVLLPAGSLSVAVTATCVATGESGNNWQPAQISALVDRVGNYDLSVTNLTASSGGCGEENDDALRKRIQLAPESFSNAGSYGAYRFHTLSVSQSIIDVAVLGPDEGLAEGCVELYPLTLNGLPGPELLAQIEREVSKEKKRPLTDKVSAKCSPRVAYQIRARLTLFTTADQETTLAAAREAINTWTRSRQTRLGQDIVPNQIIKVLQVDGVYDVALDMPAKKVLQAHEWAECTAIDVTIAGVSDG
complement(526995..527309)         PHAGE_Burkho_BcepMu_NC_005882: gp49; SN31241_5150; phage(gi48696959)                 4.86e-38            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MQRPEEYVCGLDDIHQAIHIILRTPRGSDPHRPLFGSNLWRYIDYPIERAIPHVVRESVEAIRMWEPRCRLLKVTPTIDGEHLTLRVQWRAADGVINSTEVLWR
527415..527537                     hypothetical protein; SN31241_5160                                                   N/A                 SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MAGSECVLPGGASALTGPVLMHILLNGEDCVLRKVKMKLL
complement(527518..529065)         PHAGE_Salmon_epsilon34_NC_011976: GtrC; putative membrane protein; SN31241_5170; phage(gi221328637)     1.07e-61            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MITMLKILPKTAMILLAFLAIFLIEWYTPIHSDDYRYYLLGISPESHFHHYMTWSGRIIADYTSALILYTRSQLVYSISAAVSTLVFCYFIVKTPSGTLRWNKSDYLLFPLIFFTYWISNPNLGQTTFWIVGAANYLWTNLFVVAWLFFFYTITIKNSKALSPWVALLSFMAGCSNESVSPFVSLISVLAIAYELWQNKSVSRNKIVYSLCAIAGSCVLILSPGNFIRASGKEFWYGRPIFERIFIHLTERVHNHLALIWIAYVVLLLLVLLVIFNKQIRAKIDKTSLICAALVVCIGIGTSLIMFASPSYPDRVMNGTFMFFLLAISFIAYALLKSGVKAGVVGVTAVTVLCGIVFLWSYSLMLNGYKKTAGQEIVRQKIITKEIAAGKQKFIIPDYYFVKLQNSGGHFGLFHDPAVYGEYYHVQAIFKKKVNFDYSVIANGAKHSLSNETTAYSNTRGDFAIISREQLTGSITLSVNGRQKTIPVEKMKHAEINDEFWYYASVGKGEITAISF
complement(529065..529994)         PHAGE_Entero_SfV_NC_003444: bactoprenol glucosyltransferase; SN31241_5180; phage(gi19549012)     0.0                 SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MKISLVVPVFNEEDAIPIFYKTVREYSSLKPYNVEIIFVNDGSHDATESIISALAVADPLVVPISFTRNFGKEPALFAGLDYATGDVVIPIDVDLQDPIEVIPHLINKWQAGAEMVLAKRIDRSTDGHLKRKSAEWFYRLHNKISTPKIEENVGDFRLMSREIVENIKLLPERNLFMKGILSWVGGQTDVVEYARAERVAGSSKFNGWKLWNLALEGITSFSTFPLRIWTYIGVSVSALSLIYAMWMIIDKLMWGNPVPGYPSLMTAILFLGGIQLIGIGIMGEYIGRVYTEVKQRPRYIVKNKKTMME
complement(529991..530248)         PHAGE_Entero_SfV_NC_003444: putative flippase; SN31241_5190; phage(gi19549013)       2.21e-40            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MANVTGFAVAVSFSFFANARFTFGASVSTGRYLLYVGFMGVLSAVVGWTGDKCAMPPIFTLIVFSAISLICGFLYSRFIVFRNEK
complement(530429..530668)         hypothetical protein; SN31241_5200                                                   N/A                 SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MLDGGFALSSLQKVHKHRPGKRRSATGQIAGGYLFQRNVIKPFSRAISDENVITLRCKYCIYVYWKTNAIFYFNFALLT
complement(530677..531399)         PHAGE_Burkho_BcepMu_NC_005882: gp48; SN31241_5210; phage(gi48696958)                 6.47e-39            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MKGVTRQTGIISDIDEAVVRVRVTLPECDNLRSNWLAVLQRNTQDNKDYWLPDIGEQVEVLLDDNGEDGVVLGAVYSSVDTAPLASRDKRYVQFSDGAAFEYDRQLHQLTVNGGIEKIVIEVKERTQLTSPQVEVRAQHVTVISETVDVAATSVGVKAVDVNVEAPRTGIKALNVTVDAPLSTFTGDVTVMKKLTWLGGMAGSGGIGNSAVITGNVNVLGNVNASGTLMDSGGNSNHHSH
complement(531409..532452)         PHAGE_Burkho_BcepMu_NC_005882: tail protein; SN31241_5220; phage(gi48696957)         4.46e-101           SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MAEITVSGGVFATLTPIFTLWYGHKEITYDIAPYVTSISYSDSIKNESDVIAIALEDSAGRWVNEWYPGKGDTLALRLGYQGEELLDCGIYVIDKIDISAPPSTVNIDGIATSVSKALRTKNSQGFEETTLYAIASRIAQKHGLTLVGKIAPLTIDRVTQYAETDVAFLKRLASEYGYTVKVTATELIFSHLPTLRCLAPVKTLRRTDISHYTFKDTINRIYKNATVQHQNSKQKELVIYTHDSQEKTSARGAATSADTLKINSRAPDTGAAQAKANAALDSHNEYQQTGTLTLMGCPQLTAGNKIELSDFGVLSGQWLIDKSMHKLTRSGGYTTEIDISRGPATSQ
complement(532440..532649)         PHAGE_Burkho_BcepMu_NC_005882: gp46; SN31241_5230; phage(gi48696956)                 6.98e-23            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MRYLEHVTTDGERWDNLAWRYYGDALAYERIIAANPHVAIMPVLPSGVRLIIPVISVTQTTPELPPWLR
complement(532649..533602)         PHAGE_Burkho_BcepMu_NC_005882: gp45; SN31241_5240; phage(gi48696955)                 4.96e-50            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MYAVLGEIEFDVVAYWDEFESTMGVDYTSHARIEGKPGVQFIGDKLDKITLKFNFHSQYCQPTTELNRLREAMTAHQAMALVFGNGDYRGWFVITDLTATHQHTDPYGNVIAQGGSLSLQEYTGDPKSPLLPPAITTQEPNIDEMLDELPDVSDSWFDELMSAVEEGMREAKEMMDEVADAIDDIKKTIAQAKELVKEAKALKEKCGDIVDSLKKTMSSIDALFQQPLDLQTLAGLPKALAAKMQELIDSLPGIRECAGDAGTLIEHAESLFDTITSSVAEATYDSAATLVNQARGTLQTSAPDVSQLAAADITRSL
complement(533602..535956)         PHAGE_Burkho_BcepMu_NC_005882: gp44; SN31241_5250; phage(gi48696954)                 1.33e-59            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MANDIITQLQARNETLTQAIARYGSLNASTLHTLSFEQTKITRLTQQLANSALRREENDKQRAGLLEKTQTFAGQLGKLLNVETPDWKLPYEFHGNMVDMAAKGGMNNTARDALSLNIRDWSLDFNQDQKDLQSAAATMIEGGVSALQDLSRYMPDIAKAATASRDSAQSWAQAALATRDKLNIAPDGFRFAQNMLYSVAKSGGGSVAEQTQWINAFAGKTGAQGKEGIAELTATMQIAMKNAPDAGAAAANFDHFLKSAFSKETDSWFARQGVDLQGSLLEHQQNGIGVTEAMTHIVQMQLEKMNPQILDTFRQTMKIEDLSARGDALQAMTEKFNLGAMFGDAQTRDFLAPMLANMDEYRQLKASAMQAAGQHVIDDDFAAKMTSPGEQTKALQLSLNDLWLTVGLALMPAIGELAQSITPLVRQFSAWLRENPALVQGIAKMVGVIWLFNGALNILRLGANLIASPFIRLIDIFLKVKAGLALGGGSRALSVLKSFGNGAKSLTMLLGNGLIKGLRLVGQTFIWLGRALLMNPVGLTITAIAGAAYLLYRYWEPISGFFAGVWERIKTAFDGGIAGVTRLILDWSPLGLFYRAFASVLDWFGIELPASFSEFGGNILDSLINGILNALPFLNGAIEKIKALIPDWAKSALGISAEMPSVAAAVPGIAGTMVAQQASAPLVSGAKAVTTSAKTMASPQPMKMKSAATPPTPAALPGKSGGKPYTLPSRTQSNVQVHFSPQVTVQGSGANAAKDINNVLSLSKRELERMINDVMAQQRRREYA
complement(536053..536181)         hypothetical protein; SN31241_5260                                                   N/A                 SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MALLARWFRFPPSEIDALSVDDFTRWLDEASTQIKHEYDSQA
complement(536141..536458)         PHAGE_Burkho_BcepMu_NC_005882: gp41; SN31241_5270; phage(gi48696951)                 5.30e-10            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MNEKYTLQFPFTSAAGERIDVLQLRRLKVKDMRAARRASDKPEEWDEPLMAAMTGLVTEDLAEMDLLDYQALQKRFQAMLSMATEPTATVAGNGAAGEVVSLSAQ
complement(536510..537034)         PHAGE_Burkho_BcepMu_NC_005882: gp40; SN31241_5280; phage(gi48696950)                 5.60e-90            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MAGKIQINRITNANIYLDGNNLLGRASEIKLPDISMIMQEHKALGMVGKIELPAGFDKLEGEIKWNSFYHDVMRKTANPWQAVALQCRSSIDCYNSQGKADQLALVTHMTVMFKKNPLGTFKQNENPEFSSAFGCTYIKQVVDGETLLELDYLANIFRVNGTDQLNAYRNNIGG
complement(537034..538461)         PHAGE_Burkho_BcepMu_NC_005882: major tail sheath protein; SN31241_5290; phage(gi48696949)     0.0                 SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MAANYLHGVETIEIETGPRPVKAVKSAVIGLIGTAPCGPVNQPTLCLSESDAAQFGPGLANFTIPQALKAIYDHGAGTVVVINVLNPAVHKSTIPSETVKVDDNGQIQLKHGAVQTMNIGRSTNAGNAYIKGTDYTIDMLTGKITCMGTNLKPGVQAYVNYTYADPTKVTAADIVGAVNTAGDRTGMKLLQDTWNQFGFYAKILIAPVFCTQNSVAVKLIAQAEALGAITYIDAPIGTTFQQVLAGRGPQGAINFNTSSDRARLCYPHVKVYDSATDSEVLEPLSSRAAGLRAKVDLEKGFWWSNSNQEIQGITGVERSLSAMIDDPQSEVNQLNENGITTIFNSYGSGLRLWGNRTAAWPTVTHMRNFENVRRTGDVINESIRYFSQQYMDMPINQALIDALTESVNTWGRKLIADGALLGFECWYDPARNEQTELAAGHLLLSYKFTPPPPLERLTFETEITSEYLVSLESNR
complement(538451..538648)         PHAGE_Burkho_BcepMu_NC_005882: gp38; SN31241_5300; phage(gi48696948)                 2.55e-11            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MKYIYSGPASGVTLADGQEVLLWPNSEISLPEDNEWVITMIARRHLVPVVTQEVETNEEEIVHGS
complement(538645..539100)         PHAGE_Burkho_BcepMu_NC_005882: gp37; SN31241_5310; phage(gi48696947)                 3.09e-15            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241METLSVIHTVANRLRELNPDMDIHISSTDAKVYIPTGQQVTVLIHYCGSVFAEPENTDATVQKQLIRISATVIVPQISDAINALDRLRRSLGGIELPDCDRPLWLESEKYIGDAANFCRYALDMTASTLFIAEQESKDSPLLTIVNYEEIQ
complement(539260..539574)         PHAGE_Burkho_BcepMu_NC_005882: gp25; SN31241_5320; phage(gi48696935)                 1.58e-29            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MKLSIDFWEVISLLLSFVGLMFAAGKLLLAQIEKRLNERFEALEAARRESEAGWSRLEREFLEFRADLPLHYVRREDYLRGQAVLEAKLDALYSKIELIQRGNH
complement(539587..540192)         PHAGE_Pseudo_B3_NC_006548: endolysin; SN31241_5330; phage(gi56692593)                4.19e-73            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MRYQYVCLVCAMTFLSADAAEPPRASLQWRNEVIRTAREIWGLNAPVADFAGQLHQESGWAPDALSPAGAQGMAQFMPATAKWVSQLYPELHENKPFNPAWAIRALVQYDRQLWKSVLAKNSCQRMAFTLSAYNGGQGWVNRDKKLAAAKGLDASIWFEHVERVNAGRSAANWRENRHYPKAILYQHAPRYLQWGQASCIH
complement(540195..540482)         PHAGE_Burkho_BcepMu_NC_005882: gp21; SN31241_5340; phage(gi48696931)                 3.91e-14            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MRKIIVPRLSGWLVASVVLFALIGWTSSAQIPVVIYKLSLVSLSAVLGYWLDRSLFPWARPDSFCPWEESLCCAAAMIRRAIIVAAICLAVALGL
540709..540840                     hypothetical protein; SN31241_5350                                                   N/A                 SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MIKIILLIFKVSLKIHAIVRKAIFLIERRKKCKKLTVYAYSIV
541060..541407                     PHAGE_Burkho_BcepMu_NC_005882: gp01; SN31241_5360; phage(gi48696911)                 2.55e-30            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MIQKSKEMVRLPEIINDLAFHASQVLIESMNIDSASAENAGQAIADRMMRNWGGQSIYFPKGISGRASERDYQIYSECDGRNYAELAKKYNLTLQWIYKIVKRVHTEKQHQRRML

#### region 2 ####
867519..867533                     attL                                                                                 N/A                 CGAGTCCGGCCTTCG
867690..868967                     PHAGE_Entero_P4_NC_001609: integrase; SN31241_8570; phage(gi9627511)                 0.0                 SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MCPQMKLNARQVETAKPKDKTYKMADGGGLYLEVSAKGSKYWRMKYRRPSDKKEDRLAFGVWPTVTLAQARAKRDEAKKLLVQGIDPKAEQKEAQAENSGAYTFETIAREWHASNKRWSEDHRSRVLRYLELYIFPHIGSSDIRQLKTSHLLAPIKKVDASGKHDVAQRLQQRVTAVMRYAVQNDYIDSNPASDMAGALSTTKARHYPALPSSRFPEFLARLAAYRGRVMTRIAVELSLLTFVRSSELRFARWDEFDFDKSLWRIPAKREEIKGVRYSYRGMKMKEEHIVPLSLQAMALLEQLKQMSGDKELLFPGDHDPTKVMSENTVNSALRAMGYDTKTDVCGHGFRTMARGALGESGLWSDDAIERQLSHSERNNVRAAYIHTSEHLDERRLMVQWWADYLDEIKIIYITPYDFAKMNNRN
complement(869017..871566)         PHAGE_Acidia_8_NC_010154: putative helicase; SN31241_8580; phage(gi162329488)        6.04e-06            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MNTLANEVINQIKSRLEFKNDLGFLFAHSFLQKHTQTSFSALQGKIESDSVVIYKRLIESAYLFSQSESDEDKNLAQSIAYHLNIITSDNYLKQLSENLLRALGNFPGASYLQEKNGFIPETFYAYLKRSFIENENKVKIANKEIILTNFQKKVWESLHSNVPQAISAPTSAGKSFLVVEMLANRIISGELNSAIYIAPTRALVNEITQKFINKTLPYQNEVRVTSIPTINDEYYKQIFVLTQERLQVLLDNFKNKIDIVVIDEAQSISDEIRGMILQDCLDKISIQNPDAKYVFLAPGAEGFNDLADIIGIDTIHVEKTNLSPVVQNKIIIKVDPAKENNLQLSLLDNSNILSIGELTSTRGFANENTRLAAVALELGKDEGSLVYGTGAANAEDVAKQIASGLPLLENDSDLKELSKFIKKHVHKDYSLANLVLRGVGYHYGKMPSLLRETLEKNFTNNKLKFLVCTTTLFQGVNLPAKNVFIDTPTRGNRGEALDPASLWNFAGRAGRLGYAFSGNVYLIDYDDWETKPLDSKIDFKITSSFKKVINEDFDTVISRLDKNNHLGVSQYSNVDAAAGLLISRAAKGDLHNFLERSFRTIPDKSKLEIIEDATYSSLESLNIPHNILTLNWTVDPFGQERLYNRFIQKIKDGKIDELIPRHPSGNVYTNYVGVFSRINKYILNHNTSKFSNYLTAMALNWMRGKSLPEIISLSIAKKKEKNSTRPVNVDRAVREVFDFVEDNLRFKYVQLGKAYIDLLRQALIVNNQAEKAEEIYDFPLSLELGVSSIAGQVFIELGLSRISASYLENIIPNSNPTISTAKEWLRNNDYDSLNLPLTIYSELEDKGLL
complement(871550..872587)         hypothetical protein; SN31241_8590                                                   N/A                 SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MKSEDTNSLHKIYNPVYGLDNIVLLAQECQSTDPVKVNLLCLGFKEDLPKDKELAETLFLELVHYCIPHPVIAKRKALSQTEGKDEARLYSELAREARSLFMKYKLESTLTIKKGETQEKFEQRVKNANLRYGEVGELISYCIAIHFLKAAQLVSKMALKTSSEMPVFGLDGIHATVDDEGTLTVFYLESKMTREFTSGSEQFSKSVSGFENDRKSRRNEYRILQDLSNLESLEGEERKKAVQYFDPYSSESSNVRERFVGIIVYNEEAYKNKIAIDDESPLSIHLDHFKKSYIGSYKDKVKIITEDLSKAGATPQKCRAYIFALPDVDAFKLDFAKELSGEHFS
complement(873018..873155)         Phage transcriptional activator, Ogr/Delta; SN31241_8600                             N/A                 SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MDTVIMKPWRNERESDKAQMPEKQQQTLNRYGSASKLSSRQQIPV
complement(873292..873846)         PHAGE_Entero_P4_NC_001609: amber mutation-suppressing protein; SN31241_8610; phage(gi9627520)     3.99e-08            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MNAGSITQEALNDYRSAIKSWLTLRNTQSTCQLRLAALLDTEEKPAAYASQLEDLRERLAVLEWQINCAARDGLYAHQIVLESCVTSATENFMSEHGDALTDALAPFLCAPYGLEAAMKILRTAVARQTEVRTPVISAAYKSIIDETGLTVDASMCADASASFTPAQHKVFLARLNRLNEKGGY
complement(873843..874595)         head size determination protein; SN31241_8620                                        N/A                 SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MTTVNQIPDANITPSLPPKIREAVDKVKVAKAVWQEERRKQTEAAAMIETIRKRQEDTKTETQALNDEWRNLFRENQGNMTPRMKKLRAEIALGRETLDEFEDLLAAQAAENEFLPWKTADAANHYISEHNRLIETHAVWLWNEFMKEHGQKLIQILGLLKMTLGRSASAVIGVVHTVNDPESVLKQFISEQLTTPALSCNVSSTDDITLPGISIYADDKAIQDARQSPSPAARSRMLKQRDMVKGGEKK
complement(875817..875942)         hypothetical protein; SN31241_8630                                                   N/A                 SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MGVPEQRRKKRRTARLVSPISNSGSYARQPILRQRENYTWK
876122..876313                     PHAGE_Entero_P4_NC_001609: putative CI repressor; SN31241_8640; phage(gi9627516)     2.21e-23            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MATILAPSHPQFIFVFAAVRRAERKPRISMLRIVASNEHHARLSLVHEYVLCLAARLPVREVM
876313..876534                     hypothetical protein; SN31241_8650                                                   N/A                 SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MNHAAISYDDIVRLKHLRNVGEFVTGMAVLQDCYEKPAGAQCEQLASLIYLMTEQLDGVVQRCQDDLMNMEVV
876573..876857                     PHAGE_Entero_P4_NC_001609: hypothetical protein; SN31241_8660; phage(gi9627513)      2.13e-43            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MYRRAVACAWLSACYQQNRHLQLTLDEIETAIARELEGFYLRQHGQTKGMEIACALLSDLMESGPLMSCPALSQLGIAVMDELCVRHIKKPVLH
876872..879202                     PHAGE_Entero_P4_NC_001609: DNA primase; SN31241_8670; phage(gi9627512)               0.0                 SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MSGMKVSQAVKAARGHWAKILPALGVNILKNRHQPCPVCGGKDRFRFDDQEGRGTWFCNQCGAGDGLALVTRALNVDISEAADRIHGLTHGLSVVNSEVRALTADTDSGKDAAALAARLLQASRESAGNTYLTHKGFPEHICHELTSAHKTGGVMFRPGDLIVPLYNADGELVNIQLISGNGSKCFLKGGQVKEAYHLIEGGGSSLRRMWIAEGYATALTIHHLTGEAVMVAFSSVNFLSLASVAHNKYPGYQLIIAADRDLNGSGQNRAETAAKACQCDIVLPPVFGDWNDALTQYGEESTRKAILEALKPHNASPFDTMSEAEFTAMSVSEKAQRVREHYRDALAVDPNGQLLSRYESGAWKVISQSDFSRDVAALFQRLGAPFSSGKIASLVETLKLIVPQQQNPARHLIGFRNGVLDTRTGLFSPHCKENWLRTLCEVDFTPPVKGETLETHAPAFWRWLDRAAGHKPAKRDIILAALFMVLANRYDWQLFLEVTGPGGSGKSILAEIATMLAGEDNATSATIETLESPRERAALIGFSLIRLPDQEKWSGDGAGLKAITGGDAVSVDPKYQNAYSTHIPAVILAVNNNPMRFTDRSGGVSRRRVILHFPEQIAPEERDPQLKDKIARELAVIVRQLMQRFSDPMSARTLLQSQQNSDEALTIKRDADPAFDFCGYLEALPDTNGMFMGNANIVPRQPRTYLYHAYLVYMEANGYKNTLSLTMFGKGLPVMLKEYGLHYEKRRTNQGMQTNLTLKEESNADWLPKCDEPILK
879555..879569                     attR                                                                                 N/A                 CGAGTCCGGCCTTCG

#### region 3 ####
1842588..1842612                   attL                                                                                 N/A                 CTGCTTTTTTATACTAAGTTGAACG
complement(1842678..1843748)       PHAGE_Entero_HK106_NC_019768: integrase; SN31241_17860; phage(gi428783305)           0.0                 SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MGRRRSHERRDLPPNLYIRNNGYYCYRDPRTGKEFGLGRDRRIAVTEAVQANIELFSSAERKSLTSRINNEDAMTMHAWLEKYDSIISVRGLRPKTLADYRSKIRAIKERFQDIPLSDITTRDIATILNDYVSEGKSATSKLIRSTLSDIFREAIAEGFIHSNPVTATRAAKSEVKRVRLTTDEFMKIYDAAGKQPPWVKLSMEIALLTGQRVSDICAMKWVDISEGFLHVQQQKTGVKLAIPVTIKLDAANLSLSDTLKRCKSLSQGETIISSTRSEALSSGTVSRYFMRARKESGLSFSGEPPTFHEIRSLSARLYEKQYGERFAQHLLGHKSDSMAAQYRNDRGREWERIEIS
complement(1844121..1845095)       PHAGE_Entero_ES18_NC_006949: gp37; SN31241_17870; phage(gi62362250)                  2.82e-35            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MNNKLPEWRKALNSAVENYQSTQAWYEENPDNPAAEQDMDAAEGDIEKLLKQYGVLIVLSLMDEIDELQERRKADSAEPLAWTDEEELRDLRKVGFCEMFSVEPISKDADMLRVIPLYRHAQPAPVMPAELHPDTQNLVADFCTALAEKLYKAQLKYGYDADWKQDGWATQCLSHFHQHIAKGDPCDVAAYCAFMWYHGWKTESVSGPVVPEEMPKGLAGQIVSLLAHNIGDKLLAQKIWNACRAVMLQSKYRDLSQPVDPQISEYEKIMLRAGWVMVPVEPTDEMIAAAMNCEDVLFNSDESFCVQFGNIYEAMLAAAPQEVK
complement(1845165..1845398)       PHAGE_Entero_ES18_NC_006949: gp38; SN31241_17880; phage(gi62362251)                  6.30e-21            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MTTITKERLLKIQHWRETYGAGSNVMLPAEEAEELARIALASLDADKPELKIAELINKFYERYPLASFNKDTDEPRR
complement(1845402..1845539)       PHAGE_Salmon_epsilon34_NC_011976: hypothetical protein; SN31241_17890; phage(gi221328644)     3.62e-26            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MVPISPIFFIWLAGVQAEKIAEWYSSIVWGPFNKLHNKLNPYREG
complement(1845622..1846218)       PHAGE_Entero_P22_NC_002371: EaD; SN31241_17900; phage(gi51236733)                    3.26e-49            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MSNIDKQALREAAERAMHDDWGYDTDIFHEQVTPSVVLALLDENLQLQREKDAIEAVALALRDDMRQAREQLEAAERSIAEQSAIVAAAEKLVRCKGRYHSELNYRALAKLFGVITPDLPPLEYENVHYTDAAEVEISALRQRIQELEARVIVLPQRLSPEGYHIDEAYMVDDTEGEYLDRDAVIDAIRAAGIKVKGE
complement(1846215..1846739)       PHAGE_Entero_ES18_NC_006949: gp43; SN31241_17910; phage(gi62362256)                  3.26e-54            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MEGFLRGKCIPGDLKVNETNAEYLVRKFSEAEAKISALTAENELARKAVQAFCDVVGDNIEVISEEVGRDGVLVILEAMKATGNTPATDAFLAEVRASARNEGINYAASRLAAAFNHGFLDKPVSEVLDVTRMILSAKEDLSNDPLPAADGLSGEYAEKSIEEWATQLRKGDAQ
complement(1846751..1846882)       PHAGE_Salmon_BTP1_NC_042346: hypothetical protein; SN31241_17920; phage(gi100026)     5.73e-16            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MIIRHRFKPINDIPREEMLKRNSFPLVNENRFLNTWLKERSKK
complement(1846935..1847216)       PHAGE_Salmon_g341c_NC_013059: Putative ABC transporter ATP-binding protein; SN31241_17930; phage(gi255252711)     7.70e-63            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MYGANDPRRCSGNSVSEVLDKFRKNYDLIMSLPQETKEEKEFRHCIWLAEKEERERIYQTSIRPFRKATYTKFIEIDQRLRDYRSRYGAISNN
complement(1847244..1847792)       PHAGE_Salmon_g341c_NC_013059: endonuclease; SN31241_17940; phage(gi255252712)        4.69e-135           SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MNHLMVDLETMGNGPYAPVISIGAVFFDLKTGETGEDFSVNISLESSMRYRARPDASTILWWMEQGEDARKSLTNDTQELSTALSWLSDFIAKHANPKFVQVWGNGASFDCVILRNSYALAGHQAPWQWWNDRDVRTIVELGKAIGFDPKRDMPFEGTRHNALDDAIHQAKYVSAIWKKLAK
complement(1847801..1847914)       PHAGE_Shigel_Sf6_NC_005344: gene 26 protein; SN31241_17950; phage(gi41057303)        5.00e-20            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MWLCKSCHVEWHKHNKPIYPDEAPVTFPFPRHAIHAI
complement(1848289..1848723)       PHAGE_Escher_HK75_NC_016160: single-stranded DNA binding protein; SN31241_17960; phage(gi356870708)     1.30e-82            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MIILGRVGQDPEVRYSPSGTAFANLTVATSEQWRDKQTGEQKELTEWHRVAVVGKLAEVVSQYVKKGDQVYFEGMLRTRKWQDQSGQDRYTTEVHVGINGVMQMLGGTGDSKQQAASKQPRKHQQSAPQHSEPPMNFDDSDIPF
complement(1848748..1849455)       PHAGE_Salmon_SE1_NC_011802: Erf; SN31241_17970; phage(gi219681206)                   1.00e-169           SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MNLDQLDEPFAAEDIEWRIQRSGKTRDGKVWAMVLAYVTNRAIMKRLDDVCGKAGWRNEYRDIPNNGGVECGISIKIDSEWVTKWDAAENTQVEAVKGGRSGAMKRAAVQWGIGRYLYNLEEGFAQTSLDKKQGWHRAKLKDGTGFYWLPPSLPDWAMPASGNQPSPENTNQKSPSFDCEQILKDFRDYAATETDKKKLIERYQHDWQLLAGHDDAQTKCVQVMNIRVNELKQAA
complement(1849452..1849595)       PHAGE_Salmon_vB_SemP_Emek_NC_018275: Arf; SN31241_17980; phage(gi399498832)          3.48e-27            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MLHDFDDEEFIALSSPEIEEEVEQQINLAAERQNPVISWDEFAGYYS
complement(1849585..1849806)       PHAGE_Salmon_vB_SosS_Oslo_NC_018279: Kil protein; SN31241_17990; phage(gi399528802)     7.58e-41            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MKFLISQECHAMTITPVNGTILVQQGNREFNKLYEKVFPDTKQGMSDAYTWAAGIALGWDKWQDEEWEARHVA
complement(1850122..1851249)       PHAGE_Salmon_SEN22_NC_028696: c-type lectin precursor; SN31241_18000; phage(gi966201348)     0.0                 SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MGNQNHGNDCQRAGKTKGYIVGLLLSHFKYLIRSQCGLFYCQNLRNNNMTKEIVTFKGFNKDLKCRGFQFAIGETFHHDGKVEACGSGFHACECPFDVFSYYPPAESRYAETISFGITDSEEGGDTKIASSSITIKDELTLPQFIQRGIEWIWSKIDKSLEQQIMCGSWSAATNTGYQSAATNTGDWSAATNTGDRSAATNTGNRSAATNTGDWSAATNTGDRSAATNTGNRSAATNTGDWSAATNTGNRSAATNTGNRSAATNTGYQSAATNTGDWSAATNTGYQSAATNTGYQSAATNTGDCSAAEVSGSQSVAASLGIEGKARASEGGAIVLCYRDEDGELIHIRASKVGENGIMPNTWYQLDKDGEFVECE
complement(1851654..1851959)       PHAGE_Entero_mEp213_NC_019720: antitermination protein N; SN31241_18010; phage(gi428782636)     4.53e-37            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MTVVITYLADDNARNRRRARRQAQREQAMQEQRLARKIALKLSGCVRADKAASLGSLRCKKAEEVERKQNRIYYRKPRSEMGVTCSGRQKQRGKSIPAYYD
1853537..1853731                   PHAGE_Entero_HK140_NC_019710: prophage antirepressor; SN31241_18020; phage(gi428781989)     6.10e-41            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MIRMTLADYAKIHGQAKAASDFGVIQCAISKAILAGRNIMVTVKPDGSVIGEEVRPFPSNKKNK
1853924..1854118                   PHAGE_Shigel_Sf6_NC_005344: gene 41 protein; SN31241_18030; phage(gi41057318)        3.70e-39            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MADALGINESQISRWKDSFIPKMGMLLAVLEWGVEDEELAELAKKVARMLTKEKAPKNGEFFEA
1854348..1854797                   hypothetical protein; SN31241_18040                                                  N/A                 SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MIAAFHSNNPASDEKLIHKAFAKERLSDNREFFKLEDNELSESLNEIRALVGPERNGETAEYAIYDSFISFRHENELDLNEELIEQGLGSVVGHLPAVKNFLIRAGIDYAKQLISKYNSSIVINTDGSVVMVKSLEAQCFDAEVGNEPG
1854769..1855626                   PHAGE_Entero_mEpX1_NC_019709: DNA replication protein O; SN31241_18050; phage(gi428781918)     0.0                 SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MRRLEMSLAEVFYLSKSEPVEQERRVADIDDGYTRFANELLEAIASADLTARQLKVMLAYVRKTYGFNKKTDRIADEQIAQLTGLSRQNVNKAKKELISMNCLFMDGNQIGVNSEVSAWQFSKCLQVSNFVSKLETKNVSKLETLNVSKLETHKRHSLKTKENINKPPISPKKVSQKFDPLETELPDWLSAETWLSWVTYRKEIGKSIKSKQSVTQAINVLSRSLEKGYTPEEIINQSIASGWQGIFEPKTPKGKSQPRPQHRAMQENFATKDYGQTEMPSWAQE
1855629..1856474                   PHAGE_Entero_mEpX1_NC_019709: putative replication protein DnaC; SN31241_18060; phage(gi428781919)     6.73e-146           SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MTLDEKISQLEKKLAELSSPPIAIEHTSVEIGTGICEKHGEFEQRNRYSTGPIKFASRPSGCPECMRDKLIRLQAEKIKIDEESRKRNVEFLLNNLDIPERFKGCTLQNYEPVNDDAKRVLRVCQAYASKWPERLQKGGGLVMCGKPGTGKNHLALAIARHAITEHQSSAIFTTALKIAREYKSTWSKNSTRTEDEVIRQFTKPDLLIIDEVGVQFGSEAEKMIMFEIINTRYERMKPTILISNQSKDELSAFIGERVIDRMNDGGGCTLAFTWDSYRSRS
complement(1856872..1857024)       hypothetical protein; SN31241_18070                                                  N/A                 SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MLHLPFHFINVNVIRKVGAIRRYTMMIYLIPFERYHLARNLNFVQESVIA
1857100..1857426                   PHAGE_Shigel_Sf6_NC_005344: gene 46 protein; SN31241_18080; phage(gi41057323)        6.12e-76            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MADWQIPIVILAGASLVAGFILLKKHKDRDQKVEVLYGYPANSTTWLTIYHYRKSGRWVFEWDDLFAEKRPKSWGDISECMMFEERKSGATREEFNEAWARLSERGYL
1857462..1857623                   PHAGE_Shigel_Sf6_NC_005344: gene 47 protein; SN31241_18090; phage(gi41057324)        1.35e-32            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MLSERPTPVFDIWLKWRSNGMYIETIDRRMQYLRKKGLVANVRGKGWVKINLS
1857659..1857886                   PHAGE_Salmon_ST64T_NC_004348: hypothetical protein; SN31241_18100; phage(gi24371564)     1.06e-25            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MEWFGEEFESINNSEELHVQAIKMIAWQSWVKSRAAIEIKLDDKVMAEDDFDKGHNCAIDYCADAIRAAGIKVKE
complement(1858079..1858195)       Protein ninB; SN31241_18110                                                          N/A                 SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MGLEGFAVLREWRFADALEIEFQRLVFSYRYTTLDICF
1858906..1859037                   PHAGE_Salmon_vB_SemP_Emek_NC_018275: NinF; SN31241_18120; phage(gi399498849)         2.13e-24            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MCAGCNKQLAPDEIYACAECVNEWLVYRDPNGDMSNEEGKAAL
1859423..1859620                   PHAGE_Stx2_c_1717_NC_011357: NinG protein; SN31241_18130; phage(gi209447163)         2.10e-38            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MCNQHKSGNLVPYRVELINRIGQEAVDEIESNHNRHRWTVEECRTIKAEYQQKLKKLRNSRSEAA
1859701..1860288                   PHAGE_Shigel_Sf6_NC_005344: gene 58 protein; SN31241_18140; phage(gi41057331)        7.39e-137           SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MNKLDTIGFDNKKDLLISVGDLVDRGAENVECLELITFPWFRAVRGNHEHMMIDGLSERGNVNHWLLNGGVWFFNLDYDKEILAKALAHKAEELPLIIELVSKGKKYVICHADYPCDEYEFGKPVDHQQVIWNRERISNSQDGIVKEIKGADTFIFGHTPAVKPLKFANQMYIDTGAVFCGNLTLIQVQGEGAWA
1860279..1860797                   PHAGE_Shigel_Sf6_NC_005344: gene 59 protein; SN31241_18150; phage(gi41057332)        3.71e-125           SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MGIRELNLTKEQHEWLNGWLELWGAWVYSGRLEKRMSSVIAKFMESVEPGRVMTRPMCNDDDGMLISQVVDSVMCIDKKAFGILLSYYAHGSSKRAIASYYHATAKPRKMCGRGGEGWRKPSLATCRNEIDDILKASLFVLYQPMQNAFKMRKRVEKVKHVAVKSLDMQLSI
1860861..1860935                   tRNA                                                                                 N/A                 GGGTCAGTCGTATAAAGGTGATTACGGAAGGCTGTTAACCTTCTTATCGTGGTTCGAGTCCACGCTGTCCCGCCA
1860941..1861016                   tRNA                                                                                 N/A                 GCTGGTTTAGCTCTAATGGTAGAGCAGTCGCCTTGTAAGCGAATGGGTAGCGGTTCAAGTCCGTTAACCAGCACCA
1861321..1861464                   PHAGE_Salmon_SEN22_NC_028696: class II holin; SN31241_18160; phage(gi966201365)      3.71e-27            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MGGILSLNDWAVIIGILCTVGTFGINWYYKRKEREDRLNGNVTGTTK
1861622..1861939                   PHAGE_Salmon_vB_SemP_Emek_NC_018275: lysin; SN31241_18170; phage(gi399498856)        2.12e-73            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MLGKTYTEAECKALLNKDLATVARQINPYIKVDIPETTRGALYSFVYNVGTGNFRTSTLLRKINQGDIKGACDQLRRWTYAGGKQWKGLMTRREIEREVCLWGQQ
1861992..1862465                   PHAGE_Salmon_BTP1_NC_042346: dihydrofolate reductase; SN31241_18180; phage(gi100060)     9.36e-100           SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MAVVSGRWGVDVMSRLTAIISALIICIIVCLSWAVNHYRDNAIAYKEQRDKAASTIADMQKRQRDVAELDARYTKELADANATIESLRADVSAGRKRLQVAATCAKSTTGASGMGDGESPRLTADAELNYYRLRSGIDRITAQVNYLQEYIRTQCLK
1862544..1863071                   PHAGE_Entero_IME11_NC_019423: hypothetical protein; SN31241_18190; phage(gi414090513)     3.58e-40            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MTQHIGVKLINAFPMTRQAYNDFRGWQLPAGENGEDEGYLVEYLDGGKPNTDRFDGYVIWSPKEVFEKAYRPVSGLSFGLAIEALKLGNKVARAGWNGKGMWLAYVKPYTEAVHTGSTPCFCSRVFELPEGTHGEPKRSPKQLPYIAMKTADDKLVPWLASQTDVLAEDWQIITM
1863367..1863609                   PHAGE_Shigel_Sf6_NC_005344: hypothetical protein; SN31241_18200; phage(gi41057340)     2.83e-49            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MAEIISMTEEQKFQLEIYKLVMNQNAAAEEAFQFIGTDELKLELFKIHFQSGGANSDITIRTFEAVRKSKEALDLFTTGA
1863611..1863790                   PHAGE_Shigel_Sf6_NC_005344: hypothetical protein; SN31241_18210; phage(gi41057341)     6.95e-26            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MGYVINLGKEKKFPITQELYERLESAIHDYDGEISLCEAIGTLELLKQSLIEGAKEPST
1863808..1864236                   PHAGE_Shigel_Sf6_NC_005344: gene 1 protein; SN31241_18220; phage(gi41057279)         4.97e-99            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MNMATEPKAGRPSDYMPEVADDICSLLSSGESLLKVCKRPGMPDKSTVFRWLAKHEDFRDKYAKATEARADSIFEEIFEIADTAIPDAAEVAKARLRVDTRKWALARMNPRKYGDKVTNELVGKDGGAIQIETSPMSTLFGK
1864233..1865648                   PHAGE_Shigel_Sf6_NC_005344: gene 2 protein; SN31241_18230; phage(gi41057280)         0.0                 SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MTSINPIFEPFIEAHRYKVAKGGRGSGKSWAIARLLVEAARRQPVRILCARELQNSISDSVIRLLEDTIEREGYSAEFEIQRSMIRHLGTNAEFMFYGIKNNPTKIKSLEGIDICWVEEAEAVTKESWDILIPTIRKTFSEIWVSFNPKNILDDTYQRFVVNPPDDICLLTVNYTDNPHFPEVLRLEMEECKRRNPTLYRHIWLGEPVSASDMAIIKREWLEAATDAHKKLGWKAKGAVVSAHDPSDTGPDAKGYASRHGSVVKRIAEGLLMDINEGADWATSLAIEDGADHYLWDGDGVGAGLRRQTTEVFSGKKITATMFKGSESPFDEDALYQAGAWADEVVQGDNVRTIGDVFRNKRAQFYYALADRLYLTYRAVVHGEYADPDDMLSFDKEAIGEKMLEKLFAELTQIQRKFNNNGKLELMTKVEMKQKLGIPSPNLADALMMCMHCPESAAQPDYSSYSIPCGVG
1865650..1867848                   PHAGE_Entero_Sf101_NC_027398: portal protein; SN31241_18240; phage(gi849122265)      0.0                 SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MAEKKMTDWHRKVLCNFDNAWSATQDMREQIIEAQRFVRVSGAQWEGSTNAGYSFDEGRFEHYPRFELNKIARECDRIIGEYRQNRISVKFRPKDDKASEALAEKMNGKFRADYQETSGGEACDNAFDDAVTGGFGCFRMCADYEDEMDPSNEQRRISLLPVYDPATCVFFDQDSKQYDRSDAMWAMEMFSMTPKAFEAEYPDSIAASLSRDDTGTQYDWSTPDAIYVGRYYEVRIEKVKLTAWRNPVSGETAIYDEEQIKDIVDELTDGAFELIGERTVKKRRVYCGLLSGAEWLEEPKRIPGEHIPLIPVYGRRSFVDNQERIEGHAAKAMDAQRLENLMVSMIADNATQAGGDGIPIVDVDFIPGPLMNHWAERNKKRPAVLPMTSKKDKNGTVISEAQVAGWTPPTQMPPALAGLLQYTGTAIQQITGASQLENMPSNVATDTVDSIFNRMDTQSYIYMDNMAKSMRRAGVVWLSMAREVYGSDTPMRIVNEDGSDDVALMTGEVVDRQTGQVIALNDLSQGNYEVTVDVGQSFATRRDATVKSLLSMLALIPPGTPKHDLVSSMILDNMDGEGMDDLKEYNRNQLLLSGVIKPRTPEEQQMVEQAKQQQASQPDPAMVAAQGQLLAGQAELQKAQNEQAAIQVKAFQAQTDAQVAAANVVKILASADSQQKSDIREALKLLGQFQQQQGDNARADAELVLKSQAQGHAQRMDIGSILQKSTQQQPQQ
1867939..1868832                   PHAGE_Shigel_Sf6_NC_005344: gene 4 protein; SN31241_18250; phage(gi41057282)         9.60e-16            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MDQMAENTPEVEIETDTSEQIPDDVELAEEVETEDGSESSGNDAEEDTETDDDESEQEFYFGDEKLDSPTSEDGAEHGLVKHLRKTIKEKDRELKELMRQSQKPVEQQPVITQPPRMPKLDDEDIGFDEEIYQQRMAKWAEENGKYQEQVRERKREEEARTATLQQKAANYMQRVKALKVAGYQDAEQAVREDVPVHIQDMILLESEKPEIVVLALGRNAELRKQLAEATNPVAIGRLLERIESKARIMPKAKTTAATTPTVKGSNGAVINNLDKLKAKALETGDWTPYFAAKKAKK
1868851..1870104                   PHAGE_Entero_Sf101_NC_027398: coat protein; SN31241_18260; phage(gi849122267)        0.0                 SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MANQLAKDLEIMFENYVEGFEAACVVSRNAKKFRPGDTAMQRAGDVLYRPQHYHMNIEEGLDLSNKTPTALVQRLVPSVFKEPKNILYTLDAREMRDPEHKTEAGRAAGMRLAAQIDSDLISMVTQRATNVITMADSTTGTQGRDLWNCAAGIDATMTAIGVPQGINRRSFWNPFNYKDLAGELGHRAYAQGATLTAYEKAQIPPVASFDSYKTDISGRVPKGTATSITLAAAPAHKVEAKDANDMPVDNRQGTITVSAEGLQVGDAFTIAGVNSVHQITKDTTGQPQVFRVLAVSGTTVTISPKILPPDNADVASRPYANVDANAASSAAITILNKNAAPANLFWADGSVELMYGKLAFPTGQGPQVMTATTEQGATLIMSYAFDHIKGVTTARFTTLYGCSVLVPEYTGIVIAGQ
1870158..1870334                   PHAGE_Entero_Sf101_NC_027398: hypothetical protein; SN31241_18270; phage(gi849122268)     2.18e-36            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MLYKPGNMITCGQFAVDYVIVDDEEVKSHLKKGWVKTPEETATKQKVAKAEEDGENEG
1870384..1870776                   PHAGE_Shigel_Sf6_NC_005344: gene 7 protein; SN31241_18280; phage(gi41057285)         8.38e-25            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MTDADPQAIEDAINDLEDMMAAWQAKGIELGYQFADTENGIMPLPDDDSGIPAWANDGVALKLAVQVCMDNVIQPSDALLTAADSAYQTICIALTKIPPLERRNDMPRGSGNKSAFTWNRFYIEKDDPST
1870786..1872204                   PHAGE_Entero_P22_NC_002371: head completion protein; SN31241_18290; phage(gi9635541)     0.0                 SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MPIQQLPLMKGVGKDFRNADYIDYLPVNMLATPKEILNSSGYLRSFPGIAKRSDVNGVSRGVEYNMAQNAVYRVCGGKLYKGESEVGDVAGSGRVSMAHGRTSQAIGVNGQLVEYRYDGTVKTVSNWPADSGFTQYELGSVRDITRLRGRYAWSKDGTDSWFITDLEDESHPDRYSAQYRAESQPDGIIGIGTWRDFIVCFGSSTIEYFSLTGATTAGAALYVAQPSLMVQKGIAGTYCKTPFADSYAFISHPATGAPSVYIIGSGQASPIATASIEKIIRSYTAEEMATGVMETLRFDSHELLIIHLPRHVLVYDASSSQNGPQWCVLKTGLYDDVYRGVDFMYEGNQITCGDKSEAVVGQLQFDISSQYDKQQEHLLFTPLFKADNARCFDLEVESSTGVAQYADRLFLSATTDGINYGREQMIEQNEPFVYDKRVLWKRVGRIRRLIGFKLRVITKSPVTLSGCQIRLE
1872208..1872909                   PHAGE_Salmon_BTP1_NC_042346: hypothetical protein; SN31241_18300; phage(gi100009)     2.22e-155           SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MADPSLNNPVVIQATRLDASILPRNVFSRSYLLYVIAQGTDVGAIAGKANEAGQGAYDAQVKNDEQDVEIADHEARIQQLRIDVDDHEIRITANTNAIAGLDVRLTMAEGEIVTLRADVSALDGRVTTAEGNISALQTDYVSKTATATQSLASPLNVTTSYSVGGTKVIGARQTGWTAATGAALLGAFNANQAYTVSATYTQSEVSAMATGLQQARQRIKALEDAIRTHGLIN
1872909..1873364                   PHAGE_Salmon_SPN9CC_NC_017985: head assembly protein; SN31241_18310; phage(gi389060545)     1.58e-109           SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MITFTPTRNIDLIETVGNHPDIIAGSNNGDGYDYKPECRYFEVSVHGQFGGIVYYNEIQPLTFDCHAMYLPEIRGFSKEIGLTFWRYILTNTTVQCVTSFAARKFRHGQMYCAMIGLKRVGTIKKYFKGVDDVTFYSATREELIDFLNRGR
1873367..1874059                   PHAGE_Shigel_Sf6_NC_005344: gene 11 protein; SN31241_18320; phage(gi41057289)        1.35e-156           SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MLYAFKLGRKLRGEEPYCPEKGGKGGSSDKSAKYAAEAQKYAADLQNQQWQTIMKNLAPFTPLAEQYVDQLQNLSSLEGQGQALNQYYNSQQYKDLAGQARYQSLAAAEATGGLGSTATSNQLATIAPTLGQSWLSNQMSNYNNLANVGLGALQGQANAGQTYANNMSSIAQQSAALAAANANKPSSLQTAISGGTSGAIAGAGLASLLGTSTPWGAGIGAGIGLLGSLF
1874102..1875364                   PHAGE_Shigel_Sf6_NC_005344: gene 12 protein; SN31241_18330; phage(gi41057290)        0.0                 SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MAGIGGVNSNAPSVNDIGNTLQLIRQNNDIERSGANNVGLTALQGLSGIAGVFQQEKQAQRQKEFQQAYANAYASGDRGALRQLATQYPDQIESVRKGMGFIDEDQRNSIGTLAAGARLASSSPEAMQSWLQNNAKELTRVGVDPNNVVQMYQQNPSGFGEFVDHLGMAALGPIDYFNVQDKMAGREIDRGRLAETIRSNQAGEALQQRGQDITVRGQNISAQNAALSREIQRAELQDKVLDRQIARETNQIKLDELKQKQADVRHKAEIAKADRQAAAQGAVDTFSTALDSLNEIEQSPGLSKAVGIRSAFPTVPGSDAANFEARLDTFKAQTFLPMVQSLKGMGALSDAEGKKLSDAVGALSPKMSEKAFRDSIGKIRNQLESKLSTVKKQFDYQEPVQNAPVQQSPAGSNFSSLWGD
1875364..1877355                   PHAGE_Salmon_ST64T_NC_004348: DNA transfer protein; SN31241_18340; phage(gi24371595)     0.0                 SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MAKAWKDVIASPQYQALAPEQKAQAQEQYFNEVVAPQAGNDAEQAKQAFYAAYPPPTTQQPAQQPQESPQQQGGFMSDLGNAAAETGRGLLQAGVNLANIPASMADAVASAGAWAGQKLGIGDGTYQPAPRVTTQGLEQDFGLQQGALTPQTTEGKIFSEALPYLTPVGAERIATQAPSIAGRVAQGASRLLAENAVGSLAANSERDNPETLATDLGTGVALGGAINQLGRAAGAAYRGIRGTIAPEAQQAIEFANAADVPLHTTDVLQPNSRVGRMAQTTAENIPFAGTSTMRANQQEARSQLVDEFASRFGEYDPSIVVGSLKAKTSGIKRAAGNRLEQVQNAMAGVNIQPSKAIQQIDTEIASLQKLGKVADNDTISKLQAYRDELTRNAGANGPMAMDLQQLSGLRSQFRQDVKGERTVLPNRSDAAIQRIYNAMTGDIDSAIGQNLGNDTLRRYKQANAIYADEANKLQNTRLKNVIMKGDLTPEVVNNMLFSKNKSEIQNLYRSVGQVGRAQMRNGIIGKAMEKSGGSPDQFLRQVNLMSNQTGIAFKGRDAAYLKGLKNYLESTKRAGQAGVTTPTGQQTIPFILGIGSATNPALVGVGGGYGLLARMYESEPARNAMLRLANTPRGSTAFEKALSDVERAVNSFAQGVKSESLSE
1877544..1879496                   PHAGE_Salmon_vB_SemP_Emek_NC_018275: tailspike protein; SN31241_18350; phage(gi399498815)     0.0                 SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MKRRTLLKSLLGLTSLLPVKFAASQNLQGKSTMSDITANAVVSMPSQLFTMPRSFKAVANGKIYIGQIDTDPVNPANQVQVYLENENGTHVPVPQPININAGGFPVYNGQIAKFVTVQGHSMAVYDANNAQQFYFPNVLKYDPDQLEYRLSQPDGYLLVGGLAEHYSLPVKFVVVDNAPYNGDLKAALTAATSGSVFWLGKKTYNITGLYGVNRNTVENITIVGAGMPQLSSDKRYLMDGTGTIIQGTIKNQAKGFKIFNLGIDVGDYVSQNVYPSVTYEDGLQHYGAGSNANLEINNVKLLNTVTDPSKPGTHSLLLEQLSGVKLGYVECIGGFHGFTVKCQGLQGGIAHCYGQYGDAFIFKSDSGGACADNYMERIAVGLYDNSGWPDVTMGGIYDAHDNVTIDRIGIGELIVQNASWGLIPSDANTGFITNVSIGRYSAFNVYGNYYSLTIDNKCVGWTIGEHRISNASGGIRVHPDSVEINIGTGSSKGNTKSGYALGGNSLTHGKLFANENGEAGVDYLGGLGLDASLINGYINGTVLISGYPGVKDGNPLNGWADTGAFDMILTGKTVQVTGSLTRGTAAVAYNTISACRPIKRVPIPAWGVSASSTMIPVECYIETNGQLNVAGFASIPVGGTVNFNGNYLTK
1879765..1879789                   attR                                                                                 N/A                 CTGCTTTTTTATACTAAGTTGAACG

#### region 4 ####
2082431..2082445                   attL                                                                                 N/A                 TTATAAAAATGTAGC
complement(2082480..2083865)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage integrase; SN31241_20220; phage(gi169257268)     0.0                 SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MDRGAEKKSTRCEDNMKSCTLVNAPGRQEGLMANASYPTGVENHGGSLRIWFLYKGKRVRENLGIPDTAKNRKIAGELRSSVCFAIRMGNFNYVEKFPNSPNLARFGQDRKEITVLELTERWSELKRMEISSNTMSRYESIIKNMLPLIGENKMVSAVTTEDLLYVRKELLTGFQVMKKDHRTQVKGRKSSTVNNYMMLMAEIFQFGTDNGYAKENPFSGINRLKKAKGEPDPLTTDEFIRFIQACGHQQMRNLWSLAVYTGMRHGELCGLAWEDIDLHAGTIIVKRNLTQTDEFTLPKTDAGTDRVIYLIQPAIDALRNQAQLTRLGRQFEVEVKLREYGQSVIQPCTFVFSPQCVKRGPRTGYHYAVNSINKIWAPIIKRAGIRYRNAYQSRHTYACWSLSAGANPNFIATQMGHTDAQMVYKVYGKWMSEKSAEQVSLLNQALFRYAPSLPQSMVAAQ
2083931..2084134                   hypothetical protein; SN31241_20230                                                  N/A                 SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MQVLAAQHPGFFSGAGNGSGLKPGNRNQNFFANPLVWRQLDNVAHRFLQWPRSGPSLIFSLPVLADF
complement(2084388..2085497)       PHAGE_Phage_Gifsy_2_NC_010393: conserved hypothetical bacteriophage protein; SN31241_20240; phage(gi169257271)     0.0                 SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MENTNIVTTEQQAPNTISASNAIFNVQALGQLTAFANLMADSQVTVPAHLAGKPADCMAIVMQAMQWGMNPYAVAQKTHLVNGVLGYEAQLVNAVIASSSAIHGRFHYRYGGDWERCTRTQEITRDKNGKNGKYTVTERVRGWTDEDEIGLFVQVGAILRGESEITWGEPLYLSGVVTRNSPLWVSNPKQQIAYLGVKYWARLYCPEVILGVYSPDEVEQREEREINPAPVQRMSVQEITSEVSTRTSAQESAANVDAVADDLRERIDTASSVDQAKAIRADIESQKALLGTALFTELKNKAVKRYYQVDAQNKVEAVINSIPNPGEPEAAEMFAKAESTLGAAKRHLGDELHDKYRVTLDDMKPEYIG
complement(2085508..2088393)       PHAGE_Phage_Gifsy_2_NC_010393: putatitive bacteriophage exodeoxyribonuclease VIII; SN31241_20250; phage(gi169257272)     0.0                 SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MSGTNPVFLVRKAKKSSGQKDAVLWCSDDFEAANATLDYLLIKSGAKLKDYFKAVATNFPVVNELPPEGELSLTFCDYYQLAKDNMTWTQIPGVTLPSSEAAAAARQHIVDGVDTETGEVLEDHTENFGNESNSPAQATAPAPELTVVATMPLRHRVLAQYIGEGEYLYHVDASQKKEILRLEMDTDNSYVQNLLLAAENVEAFKKAIEHDIHKIVNAVKKVFPVDGKTPELATVIQFLKTWFETEHIDRGLLVKEWAKGNRVSAIQRTESGANAGGGNKTDRNPDYEHTLDTLDVEIAMATLPMDFNIYELPGSVYRRAKEIVKKKESPFKEWSAALRATPGILDYSRAAIFALIRSAHPEFYHYPGRLQGYINANLTETDHENPTEEALTAARHTPEKDAVEEANRQLAAARGEYVEGISDPNDPKWVKTGTSQPTTEPELVKNVGNGIFDVSALMQNSSTHGTETNPETTSNVQVQKADSDEKQAGDAVQAGEDDLGTGKEAVTVENQNQAEAQQNVPESQQEEPEAAWPEYFEPGRYEGVPNEVYHAANGISSTQVKDARVSLMYFNARHVEKTIVKERSPVLDMGNLVHALALQPENLEAEFSVEPEIPEGAFTTTATLREFIDAHNASLPALLSADDIKALLEEYNATLPSQMPLGASVDETYASYEQLPEEFQRIENGTKHTATAMKACIKEYNVTLPAPVKTSGSRDALLEQLAIINPDLVAQEAQKSSPLKVSGTKADLIQAVKSVNPAVVFADELLDAWRENTEGKVLVTRQQLSTALNIQKALLEHPTAGKLLTHPSRAVEVSYFGIDEETGLEVRVRPDLELDMGGLRIGADLKTISMWNIKQEGLRAKLHREIIDRDYHLSAAMYCETAALDQFFWIFVNKDENYHWVAIIEASTELLELGMLEYRKTMREIANGFDTGEWSAPITEDYTDELNDFDVRRLEALRVQA
complement(2088841..2088999)       PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; SN31241_20260; phage(gi169257274)     1.88e-31            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MLKQCGYCRKSIDEGKEVKNTLLYRNGSQLASKEKEYCSRQCAEYDQMAHES
2089121..2089267                   hypothetical protein; SN31241_20270                                                  N/A                 SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MPYRRPAERFTPDNDALVVDETNDKTKGSICKAKSATKSSILEHKNST
2090205..2090411                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage transcriptional activator; Lambda gpCII analog; SN31241_20280; phage(gi169257278)     1.58e-43            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MGISESTVSRRKAEGYFCNMAKELAFLGIQAAPPEAVLVSRNYLTAVEILADAGLKAERARPDALGWD
2090496..2091479                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage DNA replication protein; Lambda gpo homolog; SN31241_20290; phage(gi169257279)     0.0                 SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MSMSNTAEIYKFPAPIPTQQECRMADLENGYLRLANQIQDALCIVELSGREFRVLNAIIRLTYGWSKKSDRIANSLIADKTTLKVKHVSEAVLSLAYRNIIILRRIGQTRYIGINTNLDKWAYSKPHCSKCPVSFPDDEIATWIISVPETRDSYPRKGGRASPKTGIVIPENRDSVLPHSAIPENGDSYPRKEGRASPKTGNTKDIIPKTNIKDLTPFNPPKGKVKFDPLSIPVPEWLNAASWNEWVTYRQQSGKPIKTELTVTKAFRLLKECLDEGHDPVNVINTSIANGYQGLFKPKFALNDRRAGRDVNHISAPDKTIPTGFRG
2091482..2092231                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage DNA replication protein; SN31241_20300; phage(gi169257280)     0.0                 SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MKNVIGTGSALDRLKRIIPASVQPKFSTADEWRAWQEAEGRKRSEELDRMNQKSRTEKIFGRSGIQDLHRSCTFANYEVSGEGQRKAYTMAKSYAQNFGSGFASFVFSGGPGTGKNHLAAAIGNHLLAGGHSVLVVTIPDLMLRVRECYDGGQSEASLLDDLCKVDLLVLDEVGIQRGSSGEKVILNQVIDRRLSSMRPVGVLTNLNHEGLLDSLGARVIDRLQMDGGMWVNFDWESYRKNVSHLRIVK
2092272..2092589                   PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; SN31241_20310; phage(gi169257281)     6.24e-72            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MIILERIIGLVKEQGRITTNDVVAIFGVHRTTAEKYLRIALERGGFIRHGRCGIFRDQRAVIDYDLRRYSSSQVTGFSALPVLEKSPVMQVYGASKMSINKGGAQ
2092712..2092897                   PHAGE_Phage_Gifsy_2_NC_010393: conserved hypothetical bacteriophage protein; SN31241_20320; phage(gi169257282)     2.77e-35            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MTLAHTVEKRDAEFIAAANPATVLALLDVLYEFGEDEVAISEYVTNLEDALRVAAAPQQEE
2093113..2093265                   PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; SN31241_20330; phage(gi169257283)     1.06e-28            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MEFKDTRGDVFYAYNYAYSGKKPSNDEIYKAIDELKPIGEKFEMSKTISD
2093557..2093790                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage damage-inducible protein DinI; SN31241_20340; phage(gi169257284)     4.88e-51            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MRIELVISRAKQLPEGAVPALEKELITRLQNQYENCNLTIRRGSQDGLSIVGAADGDKKRIQSILQETWESADDWFY
2094206..2094808                   PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; SN31241_20350; phage(gi169257286)     2.56e-147           SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MAHELQLIKQSSGILIPATPETSEILQSKIKLGAVLVAEFRQVRNPAFHRRFFALLNLGFEYWEPTGGTISANERKLVNGYAKFLAAYGGNESALLDAAEQYLEQIANRRVTNGISLCKSFDAYRAWVTVEAGHYDAIQLPDGTLRKHPRSIAFSSMDEVEFQQLYKSALDVLWRWILSRTFRTQREAENAAAQLMSFAG
2094808..2095014                   PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; SN31241_20360; phage(gi169257287)     1.48e-44            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MAMKYSWFHHHDCTTEQADTLISDYQKRGVRTEKSLNPDFITWTVSAKLPEYAHRVRTPKSLRQKVWG
2095017..2095628                   PHAGE_Phage_Gifsy_2_NC_010393: NinG; SN31241_20370; phage(gi169257288)               1.46e-147           SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MAKLPRRKCANKECRQWFHPIREGQIVCSYQCASAVGKEQTRKAREAAQRKAQSLQRAAEKKERAAWRQRKAAVKPLKHWIDLTQRAVNDICRETELAEGLGCISCGTKTAFAWHAGHYRSTAAAGHLRFTRFNIHLQCDVYNVYKSGNIEAYRAALVERYGEAAVLALENNNTPHRWTVEELKEIRLAALADLRALKKLEAA
2095761..2096558                   PHAGE_Phage_Gifsy_2_NC_010393: prophage antitermination protein; late gene regulator; Lamba gpQ homolog; SN31241_20380; phage(gi169257290)     0.0                 SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MNLESLPKYFSPKSMMPGAVPCGITSDTLTITDVMASLGLLTAKAAVGIELYLAKAGVLSSENIIAYIRQLAEQRAERHGALRKMEKGKRSKFLDTMARYVFRDYSLSAASLVTCSSCHGAKLIDAEVFTNKVTYPDGKPPKWVKDTKGISPSDWEVWKSVREQVRVVCKACDGKGHVKNECRCRGRGEILDKKKSELQGVPVYKKCPRCKGRGYPRLKDTEIFKALGVTEMVWRYNYKLFFDRLVEHCHIEESYAEKVLGNVTR
complement(2098187..2098660)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage virulence determinant; GtgA; SN31241_20390; phage(gi169257294)     1.82e-112           SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MDPDIEIDDDTYDECREVLSRILEDAYTQSGTFRRLMNYAYDQELHDVEQRWLLGAGENFGTTVTDEDLESSEGRKVIALNLDDTDDDSIPEYYESNDGPQQFDTTRSFIHEVVHALTHLQDKEDSNPRGPVVEYTNIILKEMGHTSPPRIAYEFSN
2099230..2099478                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage lysis protein; holin; SN31241_20400; phage(gi169257295)     2.08e-52            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MAGLIAYGRLIYDGATRKNKWLEGVLCGALSLCVTSALDVVGLPVSISPFVGGIIGFVGVDKLREIAISALKKRAGVNDENQ
2099450..2099914                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage lysis protein; endolysin; lysozyme; SN31241_20410; phage(gi169257296)     3.04e-107           SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MQGLMMRISEKGITLIKEFEGCSLTAYPDPGTGGDPWTIGYGWTHSVDGKPVKPGMMIDEATAERLLNTGLVGYENDVSRLVKVKLTQGQFDALVSFAYNLGARTLSSSTLLRKLNAGDYAGAADEFLRWNKAGGKVLNGLTRRREAERALFLS
2099911..2100411                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage lysis protein; Lambda gpRz homolog; SN31241_20420; phage(gi169257297)     9.14e-115           SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MMFNWKTMFVGLLLVSLIVAGRLANHYRNNAITYKEQRDTVTHRLTLANATITDMTKRQRDVAALDEKYTKELADAKAENDALRDDVAAGRRRLYVNATCPAVPTGKSTSTARMDNAASPRLADSAQRDYFALKERVKTMQKQLEGAQAYIRTQCHGNAGKTSNQW
2100556..2101152                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage DNA packaging protein; terminase, small subunit; SN31241_20430; phage(gi169257298)     5.35e-127           SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MVRFLFDTERHFHRIQEKSTTVDQEIKSLELNITQLSAITGAHRQTIASRLKGVKTSGGNGSNLKIYRLVDILTAMMTMPAVTGENDPNKMKPSDRRAWFQSEMTRIELEKEMRTLIPASEVLSVYAVMAKTVVKTLEILPDLLERDAALPPDALEMTQKIIDQLREDLASMTYQACADAINGDDDDNGDEGQEEEQE
2101214..2103247                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage DNA packaging protein; terminase, large subunit; SN31241_20440; phage(gi169257299)     0.0                 SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MKISDAVRKYMRVPRDAGNSVAWESTLTPYVVEAMNCLSSRSYDAVVFVAPARTGKTLGLIDGWISYNIVCDPSDMLVVQMTQDKAQEHSKRRLAKMFRHSPAIARRLSPHRNDNNVHDKTFRDGSFLKIGWPSINVFSSSDFKCVALTDYDRFPEDVDGEGDAFSLASKRTTTFMSLGMTLVESSPGREITDTRWKPSSPHEAPPTTGILSLYNRGDRRRWYWPCPHCGEYFQPSMANMTGYRHIADPMEASEAARIQCPHCHKLTEPQQKRELNNRGVWLREGQHIDRDGNITGEARRSRIASFWMEGPAAAYQTWAQLVYKLLTAEEEYERTGSEETLKAVINTDWGLPYQSRRSLEARSGDALMARAEDVSKRTVSDGVRFIVATVDVQGGKKRRFVVQVVGYGAYGERWIIDRYNIRYSLRVNEDGESQPVNPAARPEDWDLLKTDVLEKTYPLAADPEQFMPVLAMAVDSGGEDGVTDNAYAFWRRCKRKGVAGRVYLFKGDSTRREKLITKTYPDNTERSERRAKARGDVPLYLLQTNALKDRVAAALEREEPGANYIHFPDWLGPWFYEELTYEERSADGKWKKPGRGNNEALDLMCYAHALAILRGYERINWEKPPGWARLPEKDAAKTTQPVEVRQQEQHEGGEKAVKARKKKILPAWGGGSGGGWL
2103244..2103450                   PHAGE_Phage_Gifsy_2_NC_010393: conserved hypothetical bacteriophage protein; SN31241_20450; phage(gi169257300)     1.38e-41            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MTRAGLQELYNAYLEAELAVLKGKSIMLNGQSMTMESLEEIRKGRREIEDRLQRLNNPRRLFTRARLS
2103447..2104994                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage portal protein; SN31241_20460; phage(gi169257301)     0.0                 SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MNFIDKAISMMSPGWAVSRLRSRAVIKAYEAAIPTRTHKIKRENRNANQLNQIAGKSLREQARWFDNNHDLVVGALDKMEERVIGAKGIIVEPQPLTVAGTLNNALAEQIRARWAEWSVSPDVTGQYTRPVLERLLLRTWLRDGEVFSQMVAGKMPGLEPVAGVPFWLEAMEPDYVPMEQTDSTNNLIQGIYFNDWQRPKSYIVCKSWPGFATAMVATKLIDAENMLHLKFTRRLNQARGVTLLAPVIIRLLDLKEYEDSERLAARISAAFAMFIRRSDAMVQDGDAPDYADKDRDLDIEPGTILKDLLPGEDIGTIKSDRPNANLESFRMGQLRAVAAGVRGSFSSIARNYDGTYSAQRQELVEAQEGYAILQDNFIAAVSRPVYRRWLATAITAGVIDVPTDTDMATLFNAVYSGPVMPWIDPLKEANAWRILIRGGAATESDWVRARGGAPAEVKRRRKAEIDENRKLGLVFDTDPAHDPGEQDNAGSEDNSGGDKNAAGDDSRERTRGGKQ
2104957..2106999                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage Clp protease involved in capsid processing; SN31241_20470; phage(gi169257302)     0.0                 SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MTAGNGRGEGSSNSWYSIRAAANNTAEVRIYDEIGGWGISARWFAEELAALGQINRINLHIHSPGGAVLDGIAIYNLLKNHPAQKTVYIDGMACSMASAIAMVGNPIIMPENAMMMIHKPRGVAGGEAEDIREYADLLDKIESVIIPIYTEKTGKTPEDIAAMLAKETWMSGAECVSEGFADKLIQPVKAMACIHSKRVEEFEHMPQSIKGMIIAPQGNAGAQPQPQAKAPESQIQSQAQSLVTVDENAIRARLQEEQRNRITGIQNVFSLSGDRYASLMAKCIADVDCSLEMAKDRLLAEMAKGITPTNQLNGPQNRAEFHAGMYTGNGNITGDAVRAAVMARAGYEEAQKDNPYNCMTLRELARISLVARGTGVSSMNPMQMIGMAFTHSTSDFGNILLDVANKSILQGWQEAPETFDAWTKKGQLSDFRIAHRVGMGGFSSLRQVREGAEYKYVTTGDKQATIALATYGELFSITRQAIINDDMNMLTDVPMKLGRAAKATIADLVYDVLISNQKLSSDNVALFDKTKHANVLEKAVMDVASLDKARQLMRMQKEGDRHLNIRPAFVLVPTAMESVSNQVIKSVSVKGADINAGIINPVKDFATVIAEPRLDDASQSTFYLTAAKGSDTVEVAYLNGVDEPYIDQQEGFTVDGVTTKVRIDAGVAPVDYRGMVKCTV
2107105..2107413                   PHAGE_Phage_Gifsy_2_NC_010393: conserved hypothetical bacteriophage protein; SN31241_20480; phage(gi169257303)     6.03e-65            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MEDGKTIEIVATTSLKSGDLVQVGDMFAVAVTDIAAGSAGTGIAEGVFSIPKLTTEDIAVGKKVYLKDNVVQTDATGSLPYVGVVWAPAANGDETVPVKING
2107439..2107705                   PHAGE_Phage_Gifsy_2_NC_010393: conserved hypothetical bacteriophage protein; SN31241_20490; phage(gi169257304)     1.13e-56            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MDALIAERFGMKVNINGTDCIVVESDFLAELGPVEGNGKNVVVFSGNVIPRRGDRVVLRGSEFTVTRIRRFNGKPQLTLEENNGGKGA
2107686..2108252                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage morphogenesis protein; Lambda gpZ homolog; SN31241_20500; phage(gi169257305)     1.52e-134           SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MEVKGLKEAISVLKELDRGYVTRAKIRAINRVAKRVVSVSVRSAAALVVAGDNRRQGIPVRTVRRRARVRLARADKPFANIYVNCDPLTAIRLLSSPPSTPMRGRKGKPLRIGKYRFDRGFIAQAPNGWWQVFERSGAGRYPLNVVKIPVADALRHAFNTQVVLQMKTEMPKELKHEISYELRRFTKK
2108249..2108650                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail shaft stabilization protein; Lambda gpU homolog; SN31241_20510; phage(gi169257306)     6.36e-94            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MTRHSAVRQAIIAALKKTDDGSTTFFDGRPVVVEEDELPAVAVYLSDAQYTGPEVDGDIWSAVLHVEVFLKATAPDSALDEQMENRVYPALGSVAGLGDIIRTMSAQGYNYQRDDEMAMWGSADLSYDITYSM
2108662..2109411                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage major tail protein; Lambda gpV homolog; SN31241_20520; phage(gi169257307)     1.68e-179           SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MTDTTIPNPLAPVKGANTTFWMYNSEGDPFASPLSDNNWLRLANVKDLQPGELTADAEDNNYLDDENADWKSTTQGQKSAGDTSVTLAWKPGEDVQKKLIQLFTTGQKRGFRIKYPNGTVDVFRGWVSSLGKTVQSKDEIARTVKITSVGRPYMAEEDAPEVVSVTGLTVEPTNATVKVGATTAVTFTVKPDNVTDKSLRIATSDPTTATVTQAENIATVKGVKAGTVKIIGMTTDGNFTAIADITVQA
2109457..2109855                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail assembly chaperone; Lambda gpG homolog; SN31241_20530; phage(gi169257308)     1.13e-91            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MFLKKETFTRGDASVALFELSGLQRIEYLEFIQKRTAKYDTDMDGTTEADKRVAYMQMALEINAWLVSRSLLNGDSSQDADTLYQSVQAKWSYEALDAGAESVLMLSGLSADKKDNASDSGNESEDMTPEKS
2109918..2110181                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail assembly chapterone - part of G+G' frameshift hybrid protein; Lambda gpT homolog; SN31241_20540; phage(gi169257309)     8.51e-56            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MLDEMSSTELSEWADFFRENSFSDALLDAEFSTLKAQVFMLVTGKEIDAADFSLLTLPGAVQSMTEQDLLEVAVGIPGGVRFEPESR
2110162..2113248                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail tape measure protein; minor tail protein; Lambda gpH homolog; SN31241_20550; phage(gi169257310)     0.0                 SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MSQKVGDIVINMDVDTAKVAAGLQTASNGLGKLVDSSDLVEKRIKRCMESSARSVAASAKSISAAMAQSQVATRTQSDAMAQLAREANEARERAVDLNQKLRAEAAQAAVVAQAQDAAAAAFYRQIDSVKQLSGGLQELQRIQAQVRQAKGRGDISQGDYLALVSEAAAKTRELTDAEALATQKKAQFIRRLKEQTAVQGLSRTELLRVKAAELGVSSAADVYIRKLDTATKSTHALGLKSAMARREIGVLIGELARGNFGALRGSGITLANRAGWIEQLMSPKGMMLGGLVGGVAAAVYGLGKAYYEGAKESEEFNKQLILTGSYAGKTTGKLNEMAKSLAGNGVTQHDAAGVLTQVVGSGAFTGQAVAMVSRTAARMQENVGQSVDETIRQFKRLQDDPVNAAKELDRALHFLTATQLEQIRVLGEQGRTADAAKIAMSAYSEEMNKRAGDVHDNLGWIEKAWNAVGDAAKWAWDRMLDIGREDTLDEKIATLQEKIARARKTPWTVSSSQTEYDQQQLNELQEQKRQKDLLDAKAQAERNYQKTQKRRNEQNAALNRDNETESLRHQREVARITAMQYADAAVRNAALERENERHKKAMARQKEKPKAYYNDEAGRLLLQYSQQQAQTEGLIAAAKLSTTEKMTEAHKQLLSFQQRIADLSGKKLTADEQSVLAHKDEIALALQKLDISQQDLQHQNAFNELKKKTLTLTSQLADEESRVRQQHALALATMGMGDQQRGRYEEHLKIQQHYQEQLEQLKRDSKAKGTYGSDEYRQAEQELQASLDRRLAEWADYNAKVDAAQGDWTQGASRALDNFLAQGGNVAGMTENVFTNAFNGMADSIANFAVTGKGSFRSLTVSILADLAKMEARIAASKLLGSVLGMFVFGASAGGSTPSGAYSSAALSVIPNADGGVYRSAGLSQYSGSIVNRPTFFAFARGAAVMGEAGPEAILPLRRGTDGKLGVVAAGSGGMAMFAPQYHIAISNTGPELTPQALKAVYDLGKKAAADFVQQQGRDGGRLSGAYR
2113245..2113577                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail tip assembly protein; Lambda gpM homolog; SN31241_20560; phage(gi169257311)     1.73e-78            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MMKTFHWKVDPDMGVDSEPQVSVVRFGDGYEQRRASGINNDLKKYSVTIRVDREDGPGLEGFLSQHNGVKAFLWTPPYGYRQIKVVCRKWSVKAGLLKTTFTATFEQVIS
2113676..2114173                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage virulence determinant; Lom homolog; SN31241_20570; phage(gi169257312)     2.92e-113           SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MKKIVVAVLVGLALGSIGVANAAGYKNTVSIGYAYTDLSGWLSGNANGANIKYNWEDLDSGFGAMGSVTYTSADVNNYGYKVGDADYTSLLVGPSYRFNDYLNAYVMIGAANGHIKDNWGNSDNKTAFAYGAGIQLNPVENIAVNASYEHTSFSTDADSDVKAGT
complement(2114290..2114595)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage virulence determinant; superoxide dismutase precursor; SN31241_20580; phage(gi169257313)     2.06e-66            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MPGMKDGKEVPALMAGGHLDPEKTGKHLGPYNDKGHLGDLPGLVVNADGTATYPLLAPRLKSLSELKGHSLMIHKGGDNYSDKPAPLGGGGARFACGVIEK
2114913..2115608                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail tip assembly protein; Lambda gpL homolog; SN31241_20590; phage(gi169257314)     7.93e-174           SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MQDIPQETLSETTKAEQSAKVDLWEFDLTAIGGERFFFCNEPNEKGEPLTWQGRQYEPYPIQVQDFEMNGKGASPRPNLVVANLFGLVTGMAEDLQSLVGASVVRHQVYSKFLDAVNFSNGNPDADPEQEAVARYNVEQLSELDSSTATIILASPAETDGSVVPGRTMLADSCPWDYRDENCGYDGPPVADEFDKPTSDPKKDKCSHCMKGCEMRNNLVNAGFFASINKLS
2115744..2116355                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail tip assembly protein; Lambda gpK homolog; SN31241_20600; phage(gi169257315)     1.34e-152           SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MYFRISPEDYLNARNRGDIVALVHSHPDGKPCLSSADRTLQIQSGLDWWLVCDNRIHKFRCVPHLTGRQFEHGVTDCYTLFRDAYHLAGIDMPDFDREDDWWSQGKSLYLDHLEAAGFYRVNPEDAQPGDVLICCFGSPTPNHAAIYCGNGELLHHIPEQLSKREGYNDKWQRRTHSIWRHRQWCESAFTGIYNDLESASASA
2116415..2116957                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail tip assembly protein; Lambda gpI homolog; SN31241_20610; phage(gi169257316)     3.66e-127           SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MNEGWYQVRIAGSDMAPDTLTARLNESLPPGAVVHIVPRMAGAKNGIWQVVAGAALIGASFIPGLNAVAAAVLFSAGTSMALGGVAQMLTPVPKTPTVGQADNGKQNTYFSSLENMVAQGNPVPVLYGEMKIGSRVISQMMSTRDESTSGKVVVIGSPLQANTTSRQDGGITRPSVVIRQ
2117029..2120379                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail fiber (host specificity) protein; Lambda gp J homolog; SN31241_20620; phage(gi169257317)     0.0                 SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MSKGGGKGHTPREAKDDLKSTQQLSVIDALSEGPIVGPVNGLQSVLINNTPVVDADGNSNIHGVTVVYQVGETPQAPLEGFEASGAETVLGVEVKHDNPVTRTVVSENVDRLRFTFGVQMLQETTDKGDRNPSSVNLLIQFQRSGIWNTEFDITINGKITTQYLASVVADNLPPRPFSVRMVRVTPDSTTDRLQNKTLWSSYTEIIDIRQGYPGTAVAGLLVDAEQFGSQQVTRNYHLRGRIFQVPSNYDPDTRTYTGLWDGAFKPAYTNNPAWCTMDKLTHPRYGLGRRIGGADVDKWALYAIAQYCDQPVPDGFGGTEPRMTLNAYITTQRKAYDVLADFCSVMRCMPVWNGRKMTFIQDRPSDKAWTYTNGNVVGGRFKYSFSALKDRHNAVEVRYTDPLNGWQTSTELVEDHASQARYGRNLLKMDAFGCTSRGQAHRTGLWVMMTELLETQTVDFSVGAEGLRHTPGDIIEVCDNDYAGASVGGRITDLDISTRTLTLDREITLPESGATTLNIVGPDGKPFSTEIQSQPAPDRVVTKVLPETVQPYSIWGLKLPSLKRRLFRCVRIKENDDGTYAITALQHVPEKESIVDNGAHFDPLPGTTNSIIPPAVQHLTVSTDNDSTLYQAKAKWGTPRVVKDVRFVVRLTTGSGNEGDPVRLVTTATTSETEYAFHELPLGDYTLTVRAINGYGQQGEPASVAFSIQAPEAPSTIEMTPGYFQITVTPHQTVYDASVQYEFWYSATQLATAADIQSKAQYLGVGSFWIKDGLKPLHDAWFYVRSVNLAGKSVFAEASGRPGDDAKGYLDFFKGLITETYLGTELLKKIDLTENNASKLQQFSKEWQDANDKWSATWGVKIEQTKDGKYYVAGLGLSMEDTPDGKISQFLVAADRIAYINPANGNETPGFVMQGDQIIMNEAFLKYLSAPTITSGGNPPAFSLTPDGKLTAKNADISGHINAVSGSFTGEINATSGKFSGVIEAREFVGDICGSKVMQGVSIRATNDERSTSTRYTDSATYQIGKTITVMANCERNGGTGAITVTININGQVKTAEVMPYTAGIPAMYQTVVFSVYTTSPVVDISVSLRVRGQYTTSASVWPLVMVSRSGSNFTN
2120424..2120660                   PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; SN31241_20630; phage(gi169257319)     4.14e-52            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MSRVISLAAGLSLSVLFSTAAVADNGRGSGNSNIENQTRIYTGTDRGQKQHREAKGKTITRSVQCSLPAYLRDPDNQC
2120714..2123152                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage side tail fiber protein; Lambda gpStf (gpN) homolog; SN31241_20640; phage(gi169257320)     0.0                 SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MPVLISGVLKDGTGTPVQNCTIQLKACRTSTTVVVNTVASENPDDAGRYSMDVEQGQYTVTLLVDGYPPSHAGVITVYDDSKPGTLNDFLGAMTEDDVRPEALRRFEAMVEEVARQASEASRNATAAGQASEQAQTSAGQASESATAAVNAAGAAEASATQAASSAASAESSAGTATTKAGEASASAASADTARTAAAASAAAAKTSEANADASRTAAGDSAAAAAASATAAQTSAERAGASETAAKTSETQAASSAGDAGASATAAAASEKAAAASAAAAKTSETNAATSASTAAASATAASSSASEASTHAAASDTSASLAAQSSTAAGAAATRAEDAAKRAEDIADVISLEDASLTKKGIVKLSSATDSDSEALAATPKAVHAVMDEVQTKAPLDSPALTGTPTAPTPETAAAGIEIATAAFVAAKVAQLVGSAPETLDTLKELADALGNDPNFATTVLNKLAGKQPLDDTLTALSGKSVDGLIEYVGLRETINHAADALLKSQNGGDIPEKPLFVQNIGALPASGTAVAANRLASRGALPALTGATRGSDSGLIMGEVYNNGYPTQYGNILRLTGTGDGEILIGWSGTNGAPAPAYIRSHRDTADAEWSEWAMLYTSLNPPPNSYPVGAAIAWPSDATPAGYALMQGQSFDKSAYPLLAIAYPSGIIPDMRGWTIKGKPISGRAVLSQEMDGNKSHSHSARAQDTDLGTKSTSSFDYGTKSTNTTGNHTHQFGGYINSYWGDSNHTSFQPGGGAWTQAAGDHAHTVYIGGHEHTMYIGPHGHVVIVDADGNAETTVKNIAFNYIVRLA
2123152..2123733                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage side tail fiber assembly protein; Lambda gpTfa analog; SN31241_20650; phage(gi169257321)     8.40e-143           SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MTFKMSEQAQTIKIFNLRSDTNEFIGAGDAYIPPHTGLPANCTDIAPPDIPASHIAIFDAETQTWSLHEDHRGEMVYDTTTGNQVYISAPGPLPENVTSVSPGGEYQKWDGKAKVWVKDEAAEKAAQLRQAEETKSRLLQMASEKIAPLQDAVDLGIATDDEKARLDEWKKYRVLVNRMDTAAPDWPERPASQ
2124209..2125177                   PHAGE_Phage_Gifsy_2_NC_010393: prophage virulence determinant; secreted effector protein; SN31241_20660; phage(gi169257322)     0.0                 SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MPFHIGSGCLPAIISNRRIYRIAWSDTPPEMSSWEKMKEFFCSTHQAEALECIWTICHPPAGTTREDVVSRFELLRTLAYDGWEENIHSGLHGENYFCILDEGSQEILSVTLDDVGNYTVNCQGYSETHHLTMATEPGVERTDITYNLTSDIDAAAYLEELKQNPIINNKIMNPVGQCESLMTPVSNFMNEKGFDNIRYRGIFIWDKPTEEIPTNHFAVVGNKEGKDYVFDVSAHQFENRGMSNLNGPLILSADEWVCKYRMATRRKLIYYTDFSNSSIAANAYDALPRELESESMAGKVFVTSPRWFNTFKKQKYSLIGKM
2125445..2125693                   PHAGE_Stx2_c_1717_NC_011357: transposase; SN31241_20670; phage(gi209447153)          2.03e-31            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MEIDNNICENALRCVALGRRNYLFFGSDSSGEAAAIIYSLLGTCKLNDVESEAWLRDVLWKISDWSSNRVHELLPWNLETVK
complement(2125825..2126451)       PHAGE_Pseudo_F116_NC_006552: hypothetical protein; SN31241_20690; phage(gi56692976)     3.72e-36            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MCGRFAQAQTREEYLAYLADEADRNIAYDPQPIGRYNVAPGTKVLLLSERDEQLHLDPVIWGYAPGWWDKAPLINARVATAASSRMFKPLWQHGRAICFADRWFEWKKEGDKKQPYFIHRKDGKPIFMAAIGSTPFERGDEAEGFLIVTSAADKGLVDIHDRRPLALTPETARVWMRQFLEPHSKSITYRVIPALTRPMMRKDTNPCQ
2126433..2126582                   hypothetical protein; SN31241_20680                                                  N/A                 SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MQSVHTYETASRQAESIGQGENVARSGNDLQGIYTVIRNENLCIDEFRN
complement(2126804..2127490)       Gifsy-2 prophage protein; SN31241_20700                                              N/A                 SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MLRHIQNSLGSVYRSNTATPQGQIIHHRNFQSQFDTTGNTLYNNCWVCSLNVIKSRDGNNYSALEDITSDNQAFNNILEGIDIIECENLLKEMNVQKIPESSLFTNIKEALQAEVFNSTVEDDFESFISYELQNHGPLMLIRPSLGSECLHAECIVGYDSEVKKVLIYDSMNTSPEWQSNIDVYDKLTLAFNDKYKNEDCSICGLYYDGVYEPKPLHSSSWKDWCTIL
complement(2127761..2127952)       PHAGE_Entero_mEp390_NC_019721: DinI-like family protein; SN31241_20710; phage(gi428782688)     5.87e-34            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MFVELVYDKRNVEGLEGASEIILAELTKQVHQIFPDAEVRVKPMQANCLNSDTNKSDRENLNR
2128258..2128272                   attR                                                                                 N/A                 TTATAAAAATGTAGC

#### region 5 ####
complement(2154984..2156195)       PHAGE_Strept_20617_NC_023503: methyltransferase; SN31241_20950; phage(gi588295144)     5.80e-29            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MTESTFPQYPRLVLSKGREKSLLRRHPWVFSGAVSRLEGKANLGETIDIVDHQGKWLARGAWSPASQIRARVWTFDKAESIDIAFFTRRLRQAQQWRDWLAKKDGLDSYRLIAGESDGLPGVTIDRFGHFLVLQLLSAGAEYQRAALISALQTCYPDCAIYDRSDVAVRKKEGMALTQGPVTGELPPALLPIEEHGMKLLVDIQGGHKTGYYLDQRDSRLATRRYVENQRVLNCFSYTGGFAVSALMGGCRQVVSVDTSQDALDIARQNVELNQLDLSKAEFVRDDVFKLLRAYRERGEKFDVIIMDPPKFVENKSQLMGACRGYKDINMLAIQLLNPGGILLTFSCSGLMTSDLFQKIIADAAIDAGRDVQFIEQFRQAADHPVIATYPEGLYLKGFACRVM
2156443..2156958                   DLP12 prophage; SN31241_20960                                                        N/A                 SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MMALSGSVSAASAFSLSSADIPADFRLTQQHVFKGFGCSGENISPQLSWRNSPAGTKSYAITVFDPDAPTGSGWWHWTMVNIPAQIHDLPTGADKKTLPAGVVQGRNDFGYAGFGGACPPPGDKPHRYQFTVWALNTATLPLDSESSGALVGFMLNAHAIAKAQFTATYGR
2156975..2157763                   Bacterial regulatory protein, AraC; SN31241_20970                                    N/A                 SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MQEMHIRHQDLTTAEVRSSHLHRLHRVTLFSAAICHITQGSKVIIQDDSRLVAGPGELIIIPANTPLEIINQPAQNGFRSDLLLLSPEIIARFKTMYVQDYPPANLTSLCTPMSRSLTFMWENVLDAVRQGLPVGLQEHQAMGLLLALLHDGAAGPLLIERRYTLTEQVRQLIMLSPAKLWTAQEIARRLAMGTSTLRRRLQRESQSYRQIIEEVRMSCALSQLQSTTLPIGEIALRCGYLSGSRFTARFRQHYGCLPSQVR
2157812..2158093                   Acylphosphatase; SN31241_20980                                                       N/A                 SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MSNVCIIAWVYGRVQGVGFRYTTQHEAQRLGLTGYAKNMDDGSVEVVACGDAAQVEKLIKWLKEGGPRSARVDKILTEPHSPRETLTGFSIRY
complement(2158090..2158419)       PHAGE_Podovi_Lau218_NC_024329: sulfur transfer protein, DsrC; SN31241_20990; phage(gi971848691)     6.83e-08            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MLIFEGKEISTDSEGYLKETTQWSEALAVAIAANEGIELSAEHWEVVRFVREFYLEFNTSPAIRMLVKAMANKFGEEKGNSRYLYRLFPKGPAKQATKIAGLPKPVKCI
complement(2158506..2159165)       Inner membrane protein YccA; SN31241_21000                                           N/A                 SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MDRIITSSRDRSSLLSTHKVLRNTYFLLSLTLAFSAITATASTVLMLPSPGLILTLVGMYGLMFLTYKTANKPVGILSAFAFTGFLGYILGPILNAYLSAGMGDVIGLALGGTALVFFCCSAYVLTTRKDMSFLGGMLMAGIVVVLIGMVANIFLQLPALHLAISAVFILISSGAILYETSNIIHGGETNYIRATVSLYVSLYNIFVSLLSILGFASRD
2159231..2159380                   hypothetical protein; SN31241_21010                                                  N/A                 SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MVLPIFTHSFTFSFLKRFQVITVVKTVCSCLALRHKTGGSANHALPIKN
2159560..2159647                   tRNA                                                                                 N/A                 GGAAGTGTGGCCGAGCGGTTGAAGGCACCGGTCTTGAAAACCGGCGACCCGAAAGGGTTCCAGAGTTCGAATCTCTGCGCTTCCGCCA
2159587..2159664                   attL                                                                                 N/A                 CCGGTCTTGAAAACCGGCGACCCGAAAGGGTTCCAGAGTTCGAATCTCTGCGCTTCCGCCAGATTAAACAAGGGGTTA
complement(2159753..2160592)       PHAGE_Salmon_118970_sal3_NC_031940: baseplate subunit; SN31241_21020; phage(gi100105)     6.77e-111           SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MTFEKLWKMFLKSAYYTELAIRTQRDYLQHQKKLLAVFGKVKADVIKPEDVRQFMDRRGLQSKNQANQEMSSMSRVYRWGYERGYVKGNPCAGVSKFSLKAREQYITDEDYLAIYKHADHVVRAAMEISYLCAARQADVLALRWMQISDKGIFIQQGKTGKKQIKVWTPRLQQALKTAQTECPKLSPDALVLYNNDRGQFIRKTFNNRWLKAVRAAQSELGRQLDYTFHDIKAKAISDFEGSSRDKQIFSGHKTESQVLIYDRKVQISPTLDRPVIGEK
complement(2160773..2160997)       PHAGE_Salmon_118970_sal3_NC_031940: baseplate hub assembly protein; SN31241_21030; phage(gi100106)     5.75e-05            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MTRENDLLTDAELIEFTGYQKPSKQREILDRGGVSYIPDREGRPMVTWTHINAVLNGQITVQQATETKPDFGAI
complement(2161210..2161392)       PHAGE_Pectob_ZF40_NC_019522: hypothetical protein; SN31241_21040; phage(gi422936645)     1.01e-14            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MLKLSLKRGDAVHVVFADGSNGIIEARSRCELGMHLPKNVKVTREKGAFLPENLIKRNQK
complement(2161395..2161949)       PHAGE_Pectob_ZF40_NC_019522: hypothetical protein; SN31241_21050; phage(gi422936646)     1.66e-67            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MTTAIALAADYTSLLQLLESSDELTPEMIADTLESIEGELADKLDAIMVIARNNLGHAKTCDEEIKRLAERKKHFENKDKTLRKYILSCLMAANLDKLKTSKNTFSARKGSISVVIDNEKLLPDELVTVQTIIAPDKKAIKEAIEAAEAAAAQITADGGEVPAELLNPVPGAHLVIGERSLQVR
complement(2161946..2164210)       PHAGE_Pectob_ZF40_NC_019522: putative exonuclease; SN31241_21060; phage(gi422936647)     8.05e-123           SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MTIYNCLFEPKKSAIKDGAVALAISIEAPNKKVAESIVIGKLWEHYPANGDNYFKPKIWEDSEDQPRPEVGKFDEQFAQANTFDGEKWIANKPDTSVPGLPSSDEIIDLMKLPARERFAAVLMFSNSPIDGVLYSQVLDYLDNLENNTEPFDDDDRINSNILHALHNNEPVRHMHVEGLNNLIQAILAKFEDQTPGKAAISQFIKRWLENPGKREEMVPSKTSSLNTSDNIESPKVAPLRGYKHTYATLDQEIAVALLPISPDAPVLSGNLRDAEKIIAEDREDFKRWSMALRTTEKILKYDRPSIFGVIQNTPAKDTYHFPESLRRHIDSWLTEHGQFECPEPDAERTGKLLAAARGEYVEGISDPNDPKWVKTDTQPQVSNLGNGMFSVDNLMSEAASNECKKQEVTEQGTVTDDQATQARETLNSMGYGVYATNRDEAIQQEEKLSDKVKNIVQDVDQLVERIKREEQFPQASELVQSINEMQSAERDNLELWKNVFKTDERFTTAFSVNGGGTSINGTYMTMIATREFGPKGIGWGVDILEERFDNGAPITRTVKGTDGNNTWELIPDGVLTEKHHVIKIRLWYIRNSVRGEEISFGCTPYIYGSKYGPICDGEATKKSLTDATKKALSALGFCADIFMGLYDNPEYRQKNKAEFALKNASENAEDAARVRQELDDKLTRVANTIASAVSENEINKVYSSIAREAEVHRKDAEAKGDTQHARYLGGRLRRLTTIKDERIAELNKAQEKAE
complement(2164493..2164816)       PHAGE_Pectob_ZF40_NC_019522: hypothetical protein; SN31241_21070; phage(gi422936648)     7.02e-07            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MEALAIPVKLYIHYNANTFAQEKVIVSTCDMSRTFPDQYVLLETRDISIDVNQPEPFDIIALQVDQLRGQKEKIATLAKHQIAQVDDKIQQLLCIDHSPVQESDIPF
complement(2166212..2166427)       hypothetical protein; SN31241_21080                                                  N/A                 SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MFLPAFRSPLEDFSFQFVEVFHFVASPVAENLITLNQISNTPLVKLRSYLEHHRLDLDKDQDESHEVLPEM
2166461..2166808                   PHAGE_Pectob_ZF40_NC_019522: putative cII repressor; SN31241_21090; phage(gi422936652)     1.13e-24            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MGGNTRSVKLHQMEDSKGNADWRAINNNRQQIFRWLRGETKAARTKTKALAKAMEAALPAERYAQLGMTAQHLICIAIRDFAAAIIALLLDARDRPQRIAQALQAIQETQRLTSV
2166831..2167055                   PHAGE_Pectob_ZF40_NC_019522: hypothetical protein; SN31241_21100; phage(gi422936653)     4.92e-14            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MQTSTDRITWRNGWRLNGEPSCAHDVRGIFEERLAAKKWEIYEQRKAEMIETCVFLTPKDYELACRELAELLGI
2167073..2168038                   PHAGE_Pectob_ZF40_NC_019522: putative replication protein; SN31241_21110; phage(gi422936654)     4.04e-62            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MARAMAIKTGNPIRKLVLIKLADNANDNGECWPSYQHIADHCECSRSAVRTHIDALIGMGVLTKENRMGINNGKGNTSNVYYLNLDNPVPPKSTAPVPSKITGMPLENTPPMPCGGTRTSHSFEPVNEPNDPPNPQKGKGDEWILADAKKALEFYNEQTGTRCRDIKPFVLMLTPTQTREAYTLAELQLVIRWVLATWRRRGSGLPKPANICRVNRFDGYLADAEAWATTEADVDPDAVMKGYNEIFADTLPAAELDADRRGMIIRLAAHMKNKTTGAFLGYFEKFRADAPDFYFGASGWRASFDYLMKPETLRKTREEAL
2168035..2169423                   PHAGE_Salmon_BTP1_NC_042346: RNA polymerase binding protein; SN31241_21120; phage(gi100043)     1.67e-135           SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MSPQELEACVLAGLLNGGASPDAFDVIASTPEESFSIGFYRRTFSEIKKQALTSGMIDMLFISEALGGASLANLSEISRIPATVPNLKGYARKMVKAWRSRALAKLLQDGADGIRNAVNQEQRDQIVENAVAQLLDMTADSGDVQPVHINELLPAYMDTVQKRMNGDESTRNLLTGIVDLDNATGGINPQDLIVVAGRPGMGKTEFALTVVEGVTSKGGGALIFSMEMAAAQIVERSLAGAGNLSVSRLRNPQDMYDEDWARLTAAIGELTDRDIWIVDATDLTVEQIRAIAETHKRRHPHLAMIMVDYLGLIKKPKAERNDLAVAHISRNLKTMAMRLHTPTFALSQLSRAVDARPAAQRRPVMSDLRDSGSIEQDADSILFLYRDDVYNPESPAAGVAEVILGKCRFAAAGTVIYQEFKNGHFLPIDQHVGKEKTRIQLEAAKPRKPHRKYSEKYNTDAF
2169413..2170141                   PHAGE_Pectob_ZF40_NC_019522: hypothetical protein; SN31241_21130; phage(gi422936656)     8.93e-11            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MHFKRLTRAKFREERPMTDLIYPKVETIDDACDWTNVIIWRMNAGARARSRSMYVPCPRPVPIPGLTVRVPSTVKKVKQSGPAPRRHTKTHTGTVIYSGGEKTVKLRETATVWTSGSKENYDKKTGYRVGVTSRCRLLLDSIKPIAASTEPVVQSKSSELPAVQLVAIMKGKTLSYQGIMSAIKKYHPDIKITLEQLQKRVFALCMSNFVGIERHDDMPVTHFTLKSVDPRFYVHSEKNMRA
2170145..2170393                   PHAGE_Pectob_ZF40_NC_019522: hypothetical protein; SN31241_21140; phage(gi422936657)     3.61e-17            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MAGQSDYLPPGLPLNRAKWPQECQLKEHYDMRAAALIRQLYERKVTRQMVIQHIDATPESYRDFFRGRLNYWRQMREGGNSE
2170386..2170988                   PHAGE_Escher_TL_2011b_NC_019445: putative adenine methylase; SN31241_21150; phage(gi418487629)     2.41e-122           SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MNKKYTLIYADPPWAYRDKAADGDRGAGFKYPVMNVLDICRLPVWDLAAQSCLLAMWWVPTQPIEALKVVEAWGFRLMTMKGFTWNKCGSRQTDKLVMGMGHMTRANSEDCLFAIKGNLPERIDAGIVQSFTAPRLEHSQKPDFVREKLVQLLGDVPRIELFARQSSHGFDVWGNECDSPDVMLLPGIAEFIKEHGECAA
2171155..2171493                   PHAGE_Entero_Tyrion_NC_031077: recombination endonuclease subunit; SN31241_21160; phage(gi100052)     5.22e-60            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MAKSASERKAAQRARQSAAGERKIELVLDSQELDMLERNCAARRPGRAPYEMGEYIAMLIRQDDARVRGRIKSISANQCGKCGDALPITSCPCAGDSQCWVTSGWHAVKLTM
2171937..2172533                   PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; SN31241_21170; phage(gi966201473)     2.12e-82            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MAQYSFVKSAGGVLIPATPDAREFIDKKFRLGAVLYADFKQARNAAFHRKFFALLNLGFDYWQPSGGAISPADKKLVRGYVQLVAHYAGHEETLQELADQYLHEEAEKRASNISSVKSFEAFRAWVTIESGFYTEYQMPDGTSRKEPKSISFAKMDDIEFSQLYKSVLDVLWNYILYRTFPTQQAAENAAAQLFSYAA
2172952..2173398                   hypothetical protein; SN31241_21180                                                  N/A                 SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MFNALLASKKVSKTAIQQVLRHLKASGLSKDELREYFEDLLAGKNKSHLAFCTDAEGLMMDAVIGEILVRAGHKKLFGLICQRYKRRMSKKAMARELNEMHPEWCLRTCESRIDVWLQMAEAMLYQPMCEVFEKKPDRFRLHDCAGVA
2173791..2173979                   PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; SN31241_21190; phage(gi169257242)     1.05e-30            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MKEGYYWIQHNGVVQVAYYTNDTVDDLESGQLIVGVWHLPRGDDICHNGEAEVLSGPLQPPA
2174176..2174484                   PHAGE_Bacter_APSE_2_NC_011551: phage 21-like group II holin; SN31241_21200; phage(gi212499716)     2.95e-07            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MTMDKHTTWLAYIWALISGICAQWTLNDYGALIGIVLGIGTFLVNKHYKKKSEQAQARQAAAMEERNRLIARILEKNDHDSTLKMLAVSEMPEGSNGAQDKS
2174462..2175001                   PHAGE_Entero_mEp460_NC_019716: endolysin; SN31241_21210; phage(gi428782372)          8.33e-99            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MAHRTKVKYGLSAAMLALIAAGASAPQLLDQFLQEREGNTLVAVRDNGGVWSVCRGVTHIDGKPVVKGQRLTQSQCDHYNAIERDKALAWVNKHVHIPLTEPQKAGIASFCPYNIGPGKCFPSTFYRKLNAGDRKGACAEIRRWVYDGGKDCRNRENQCYGQVIRRDQESALACWGIDQ
2175171..2175308                   PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; SN31241_21220; phage(gi966201440)     6.45e-14            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MIDISKLIRELRLMIEQLPNWKFILIWLVLFVAAIGYLIGQIRWW
2175352..2175774                   PHAGE_Salmon_SEN34_NC_028699: outer membrane lytic protein Rz; SN31241_21230; phage(gi966201480)     1.10e-74            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MIAALAWATDHYHSNAVRFRQQRDTATHNLKLANETISDMQTRQRDVAALDAKYTKELADAQTRNTDLQRRLAAGGRVRVEGRCSVPTETETASTSRVGNAATVELSPGAGQNVLNIRAGIISDQEKLKYLQEYIRTQCK
2176275..2176904                   PHAGE_Salmon_SEN34_NC_028699: terminase small subunit; SN31241_21240; phage(gi966201418)     4.99e-148           SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MAKPDWEAIETAYRAGVMSLREIASHHGISEGAIRKRAKRDDWSRDLNARIQQKADDLVRKQEVRKTVRTKTELTERVLIEATAEVIASVRMEHRGDIRRARELTNILFDELGAQCADVGALEQLGDIMFAPDDKGRDRLNETYQKVISLPSRVKSLKDLSDSLKTLIGLEREAWSIDAVSEPEKTPLPGKNTDLTTDQAAELYKKMMG
2176907..2178529                   PHAGE_Salmon_SEN34_NC_028699: terminase large subunit; SN31241_21250; phage(gi966201419)     0.0                 SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MPLPFSFDFKHPDYQMVFEWRMERLQRIRQHPEMLPALKQFYRTNPAQFIIDWGMTTDPRNIDYGLPVTIPFLLFPKQEEWIHWIMERWGKRENGITEKSREMGLSWTAIGMACSLCLFNKEMVIGFGSRKEEYVDSTGDPKALFWKARKFVETLPVEFRGSWNEKKHAPYMRVEFPETGAVIKGEAGDNIGRGDRTTLYLVDEAAFLQRPLLIDAALSQTTRCRIDLSSVNGMANPFAQKRHGGKIPVFTFHWRSDPRKDDEWYRRECEKIDNPVVVAQELDLNYSASAEGVLIPSDWVQAAVDAHIRLGIQPTGKRLGAMDVADEGRDKNAFSTRHGFLLENVREWSGVGSDIYQSVEKVFGFCEQDNLEEFRFDEDGLGAGVRGDARAINELRKAARRPPILATPFRGSGAVFDPDDEAVRGDNGQAARLNKDFFANAKAQSWWYLRKLFRNTYRAVVEGMAYNPDEIISISSTMESKDKLIIELSQPTYSINGVGKIVVDKQPDGTRSPNLADSVMISYAPMNSALNIWELLGRQA
2178562..2179998                   PHAGE_Salmon_SEN34_NC_028699: putative portal protein; SN31241_21260; phage(gi966201420)     0.0                 SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MQATADGYENFVARVGMQTPNQHSASTYRANFTSRNRMLVEWSYRSSWLIGEAVDAIPDDMTRKGIRITSEIDAKDRGTLEAQLDQLQIWDALNDVLKWSRLYGGAVGFIMIEGQAPMAPLRLETIGEGKFKGILPLDRWMINPVLTRRIKEMGPNLGKPELYDVVTTATGIPAWRIHHSRLIRFDGVTLPFQQKMTENEWGMSVVERIWDRLTAFDSATVGAAQLVYKAHLRTYKVEKLRELIALGGPAFEALLKNIDLIRQFQSNEGMTLMDAKDTFETHQYSFSGLDDILSQFAEQISGAVGIPLVRLFGQSPKGFSTGDADLANYYDRVSSLQERRLRLPVRRVLDIMHRSELGKPLPDDFTFEFNPLWQMSDVDRSTVAVNTTTAIVNALDAGLMTTKAAMTDLRENSDVTGIGASITDEDIENAEDEAPPDIGELVDKPPEPTGGDPISNEPTADSAGGRGYRKWALRWFKR
2180012..2180629                   PHAGE_Salmon_SEN34_NC_028699: putative head morphogenesis protein; SN31241_21270; phage(gi966201421)     4.29e-131           SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MEALERYSEIITPWATKVAENFTADIVRQNEKQWRQHSRNISAELRNMVDRAPVGQVMQSIIAQQVRYIKSLPLEAADRVYDIQNKAIEAVVTGGRAEPFAKEIAASGAVAKSRADLIARTELGRATGALDMSRAIAIGSDGYIWRTADDGDVRHSHAEMEGKFVRWDKPPTLDGMTGHAGELPNCRCYKEIVFARVPFAMKRAA
2180633..2181865                   PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; SN31241_21280; phage(gi966201422)     0.0                 SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MKYFFNTRLGETRYQLADGSLLCRDVPIGRTGKQLYGAADLPNLKPDKFGEIVVTRSPEQVFHPATLASFEGMSITILHPEDENGNVRLVNPENWKELAVGHLQNVRRGTGDQSDLMLADLIVKDESAIQLIEDGLREVSCGYDAEYEQTEPGKARQVDITGNHVALVPKGRAGNRCAIGDRDTMANQKKSWWTRMRTAIKTGDSDTMNELLDSAPAAVTGDEGDLPGGVNLNINLSPQQPLPDKKPEMGGDVTGDGEDDIKTLLKALLAKLEGTATGDNADTPDDKDKKDPTGDGEDNEEETTITGDSAYRAEVIIPGIDLSRKVKPTAFKRDVLAAADKTLVRQVVGDADIRKLPKQSVDMAFNAVSEIAKGRNTRSTTGDAQRPGMGMTSIASLNKQNADFWSNRKG
2181891..2182367                   PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; SN31241_21290; phage(gi966201423)     1.09e-108           SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MPVGIAGAISRPQDLTVEPVILKSDNAFAAYGLAGKYDADGFFVPLAEGDTVDKVKGIYVRPYPTTSQPDMVRQVGSDKNFPGDAMKRGYMTVNVGADASSVKKGGVVYIVVSADASIPVPLGGITAAEVTGKTAALPDAFFTGAGDANGNAEISWKI
2182379..2183320                   PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; SN31241_21300; phage(gi966201424)     0.0                 SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MITFDQATVDSSGAFLIGELERLDQGLNLPLVGYTWTRDIQLREDVSIADDISSWTNTSFGVAGSGANPNGKNWVGKDSTAIAGVNVDISKDGNPLNLWGMELGWTVVELAAAQQVGRPIDTQKYDGMQLKWQMDNDEQVYVGDEALGLKGLTNLVGVTLNNATKTWANSTNDEILDSVNSILSNAWAASGYSVVPSDLRIPPEQYSLLASRKVSEAGNQSLLTYLAVNTIAFHQNGVPLEIKAVKWLKGRGVGGKDRMVAYTNDKKYVRYPLVPLQSVPVQYRGLYQIATYYGKLGAIEPVYKETLSYVDGI
2183329..2183751                   PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; SN31241_21310; phage(gi966201425)     3.74e-81            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MAPKGARRKLKMAKEKLVTIHVHTPFTLTLGDQSKQAFCTGRHNVPEDVASHWFTRAHAELSESGSNETDDQQLIIDSLQAQIADKDKQIVDKDQLISDLKEALLKLQEQNDSLQAQIAAARTGGNGAKDAKESKSANGK
2183717..2184124                   PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; SN31241_21320; phage(gi966201426)     7.06e-93            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MPKNQSLPTVSDFRRDFLQFADPARYPEPQIQFRLNLADELLSENVTGKKLFPYFAELFVAHYMTLWAADSRAMLVGGPGGSTNGVQSSKSVDKVSVSYDTSATLNPDAGFWNNTRYGAEFYQLITMFGAGGRQL
2184121..2184675                   PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; SN31241_21330; phage(gi966201427)     1.03e-129           SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MSFKSGVTTRVDNAQAILDALKSLTKKDVLVGIPVEDSDRDDVSFGNAGIGYINEYGSPAQNIPPRPHLVPGVKSVEDQTMPQLKAAAQAALDGNAAGAERALNRAGTVAARGVKNHIKAANFTPLADSTVEARARRGRKGAKAELARRAAGESPGTTLAKPLYDTGKYLASITHVVRDKDADS
2184662..2185051                   PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; SN31241_21340; phage(gi966201428)     3.02e-89            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MPILDVTDVLFDPDFCDFNLWVTRRAQTVDEDGIGSDSEVKTQFAGVVTVDRSLENRRMQAGQVISGAILIVTTERLTQGQTGRDADIVTYQNRDYRVTFVDPYTAYGAGFVQAHCELLPFDGGTPVEQ
2185026..2185589                   PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; SN31241_21350; phage(gi966201429)     1.48e-103           SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MGVLPLSNNTSTQCGWLTPTSGDPDYDEALDRLLSQWMRNVSGLPAGMVRPRWQKDQPPLLPVETNWCAFGIIEWPIDNSPAFTQQTDTGTQLWRHEDFVAMASFYGPGGMQIASRFRDGISVEQNNAELNQSDLSLVDYGDIVPFPELINQQWVRRYDMKVRLRRKVVREYNIRALQDAPVSFFGE
2185593..2186738                   PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; SN31241_21360; phage(gi966201430)     5.78e-179           SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MPQGLPVSNVVNVDVIIGPRAATGRNFGSLLILGSSTVIPVSERIRLYSSPEDIGTDFGVDSPEYEAATVYFSQSPRPKEVYVGRWAKTLATGEAGAAENLMDAVNAVMGYTNWYGLGIADKEDIADDDWLKVAAAVEASGVSRILAITTSDPATVDATSTGDLAYKLKAAKYGRTFVQYSSSSKYAALSAFGRAFTVNFNGSNTTITLKFKQEPGITYETLTTDQAAALDAKKCNVFVYYQNDTAILQQGVMSSGDFFDERHGLDWLQNYVQTNLYNLLYTSTTKVPQTDAGVTRLLSNVEQSMDQSVTNGLVAAGVWNGGPIGQLDSGDTLTKGYYVYAQPISEQAQTDREARKAPVIQVACKLAGAVHFADVQINVVR
2186751..2187194                   PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; SN31241_21370; phage(gi966201431)     7.42e-72            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MGSTYSFMDVTASLSGPTGEIDLGYGSASSEEGITVAMAGPKNTMTIGADGEVMHSLHADKSGTVTVNLLKTSPTNKKLSLAYNAQSQSSGTWGNNVIVIRNKVSGDIITARSVAFQKQPNNANAKTGNTMPWVFDCGKIDQVLGEF
2187231..2187650                   PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; SN31241_21380; phage(gi966201432)     2.29e-77            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MAKLSVFDQLKVTRKLLPVLAGMMSDFGSIRSLLPADGKIDTVKFDQLKPVFETLLPRIAEELSSLTEEDTNAIIHPCLSVVSRKHMDGWTPVFSSGQLMFDDIDLLTMLQLVARVVADSLGNFLPVSPTSATPGHPQG
2187828..2189837                   PHAGE_Salmon_SEN34_NC_028699: tail tape measure protein; SN31241_21390; phage(gi966201433)     0.0                 SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MNAETIKDFLVSLGFGIDEAGYEKFESVLAGVTANAIKTGLAVEGAALSVVAFTAKIASGLDNLYWASQRTGATVLGIQSIGYAVSQVGGSVDAARSSLESLSRFVRNNPGAEGFLNRLGVQTRDASGNMRDMAAIFTGVGQKLSSMPYYRANQYAQMLGIDENTLMAMRRGMGGFSGQYSAMAKAIGYDSQQAAVSSNKFMTSLREFGAMAGMARDKIGSNLAGGLAGSLDTLRRHILDNFPRIEQTLTKAIKGILALGDIIGRLFFRLIEGTSDLITWWKSLDKQTRDLISLFGALTIALRILNSTFWMSPIGLITALTAGIALLWEDYRTWKEGGKSLIDWGKWKPEVDAALKMVHDLQGAINDLAKALAKLLNIDPKSWSLKWDFSNFIDQMGEFSKMLNMIADLLNAIKDGRWADAASIGKRMLNQGGENPSAMPMVTDSANSSADWIKEHWGFDPRSVGRTVRGWFGGDDPEQHGQSVKRPQPTKAGAELLGWMQPMLTNLEHLYRLPEGLLRSVAITESGGNQFAVSGAGAKGLFQFMDGTARDMGLRGNDVFDPEKAAQAAAKYLSQLLRANGGDLSKALASYNWGIGNVQKHGMALMPQETRNYIPKVLSNMPAPGAQVQQQNTYHIYGGGDPHSVGNQVERRQQSANAQLMRGNQTKVG
2189900..2190412                   PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; SN31241_21400; phage(gi966201434)     5.36e-119           SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MVVSEKHTDTLEITEHPVEVGAAIADHAYKKPSEVVMEVGFAGGGSLLDFASNLTATSLLGLSPQQTYQEILDLQESRIPFDVVTGKRLYSNMLIRALEVTTDRTTENVLSAVLTLREVLISQTQQVTVADKTDMKDGASTSPVLNTGTKTTKPPNTSLLQSGAAFLGLG
2190412..2190714                   PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; SN31241_21410; phage(gi966201435)     2.43e-68            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MTIQEIPLTADNQQFSIILAGITWRIRIIWRDLYWIMDLQNDRGEPVISGIPLVTGADLLAQYAYMGLGFKLVVMCDDSTQDYPTKTDLGGRSHLLVLTE
2190756..2191784                   PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; SN31241_21420; phage(gi966201436)     0.0                 SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MGENGQGIQLSDFKVTFTIDWFNISSASRVGTFKIYNLSADTVNRITGQEFSKVRLIAGYDGIAPEVAASDVGIAREVDADTVGQSDGRNYGLIFSGEIRYSVTGKDSPIDSYVLIQAADTDLAFATSITNQTLAAGYTTEDMFRLLMKDFEAKGATVGRTPVFPPTVFPRGRALFGMTRHLMDNVAAQCGATWQFVDGQLNMLPEGEYMHDAIVLNSATGLIGMPQQTIGNGVNVRALINPNIRVNGLIQLDQASVYRTALSNNDIAMTGGRITDQNTDGNITLSGTTAQPASIATDGVYVVKGIMYTGDTRGQAWYMDMMCEARGAADLVSSSARERGLQ
2191859..2192113                   PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; SN31241_21430; phage(gi966201437)     4.33e-32            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MTGDGMTVINGETVTSQKIKFLGKDGDYSNMKMDMGLMPSRDGNNYGFEFVKRNGKAFLNVQLLQNSMDAPRIIGSFPCKKVPD
complement(2192197..2192331)       hypothetical protein; SN31241_21440                                                  N/A                 SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MPLKKRQYAQVVERWRALLHGALSAENLAYFEQNPQALSLVTKE
2192771..2193523                   PHAGE_Salmon_SEN34_NC_028699: baseplate assembly protein; SN31241_21450; phage(gi966201439)     1.42e-121           SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MAVSDQTRSGDLAETFKSERETTKNQIRVALPGIIQSFDPGAVTAVVQPAIRSVETDNDGNRITKNYPLLVDVPVVFPRGGGCTLTFPVKAGDECLVIFADRCIDFWWQNGGVQEPVDDRVHDLSDAFCIVGPQSQAQKISGISTSAAQLRSDDGSTFFELNPSTQKIKIVAPGGLDVVTPLADFSAKVTIHGLLSWLGGMVGSVVSGVASKITGAVEFIGSVKANGKVIDNTHTHGGVQHGGSNTDEVN
2193523..2193876                   PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; SN31241_21460; phage(gi966201441)     1.42e-68            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MRYRREDGEDDYTFGSGDDTWLINSPEAVAQAVKTRFALWYGQWFLDKTEGTPWIQSVLGKQKPETYNLAIRKRILETRGVKSILSFNTTVNTSTRRVQFFAEIDTIYGTTTVTSEA
2193889..2195076                   PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; SN31241_21470; phage(gi966201442)     0.0                 SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MDTLGLSATVTAEGISAPDYQTILDTLTSYFQQIYGSDAYLEPDSKDGQMVALVALAIHDANNTAIAVYNCFSPATGYGAALTSNVKINGIARKGATNSTVDLLFTGTAGTIITNGTVKDTNNVIWRLPDSVVIGVDGTVTATAICSKGGAVAAPAGTITTINTPTRGWTSVTNPAAATVGAPAETDAELRIRQGQSVAIPSITPFEGVDGAIANIAGVTRHKLYENDTGKTDGNGLPPHSISAIVDGGDVTEIARTIRGNKGQGVRTWGKTSVTVPDKYGNPHIISFSRPTDVPVYGKITLSVFAGYTSQIGVQIQQAVADYINRLMIGDQVLLSRIYSPANLGVVSGGNARYYDIQELLIGKSPETVAAANINIAYDESASCKPENIIITVAA
2195073..2195753                   PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; SN31241_21480; phage(gi966201443)     3.52e-158           SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MSKYTDLITNYHATKPKFVEHIDLVTRPLAETSAAMKGLINAFDIDHAAGVQLDILGQWIGLSRVVSQPISGVYFSWDTDGLGYDQGVWQGPYDPDSGYTSLSDETYRIVLKTKTAINNWDGRNDSLAPILDAALDGSGLKMQIVDNQDMTIGIWVFPETDISAVSLELIAAIRQGYLTVKAAGVWGGSIEIPSVETPSEGNRFFGFDMDNEYISGFDAGSWGTLL
2195753..2197285                   PHAGE_Salmon_SEN34_NC_028699: tail fiber protein; SN31241_21490; phage(gi966201444)     1.81e-89            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MAKNDFKPFATGKGANVTSQPDWEALPALLSGFTAGKASSAQVNKALRQASFIAAALAQYTASKSGQDVLDDGDLSGFIAKMSAAFGKDFQTLDATLTALAGLATGADKLPYFTGNDTAGQTDLTSVGRDIIGKTSVADILTYLGLGETINLAKNAVPATRRVNNKPLSGDINLWASDVKAISADAVGEITDNGTMASANIPGWWRVSVSNSDSVADFPTYPDGSKLYSYGYMFVEKIGEVWFQHYYAHMGANAKRQDWGTEPNTSRPWIIDYNTANKPSAGDVGALPITGGRLNGSLGIGTDNALGGNSIVLGDNDTGIKWHSDGVLGLYANNALVGYIDNSGLHMSVDVLTNGILRAGNGKTLTLSSGNNSAMNAGFSLWGNGTDRPTVIELSDDQGWHFYSQRRQDGGIELSVNGNIYPANYSNFDARYLTSGNVYTKGESDNRYVQNIQRGAPVWPGKVDEYGPAEAPAGCFLTQARHDPTTAYGVTFAYRPLQMWVGNGWRTING
2197300..2197818                   PROPHAGE_Escher_Sakai: putative tail fiber assembly protein; SN31241_21500; phage(gi15834244)     3.24e-59            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MELKNVTRYIPDDQDYDNNFLYFRSEDGQDFYESLSKFTKKYKLCIDSENIIRSVAEDVSRLYPAGFSVVEVNKLPAGFNIYGDWKYSNGTVLAVPVDYQAKAETTRQKLLDGANSIIADWRTELALGEISDDDKATLTKWMSYIKGLKSLDLTGISDEATFNKIQWPALPQ
complement(2198107..2198232)       hypothetical protein; SN31241_21510                                                  N/A                 SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MVVLGFLYLPAKFYTTETKGQEILYYRFQWPLQMKKMLWPI
2198315..2198923                   PHAGE_Salmon_SEN1_NC_029003: tail fibers protein; SN31241_21520; phage(gi971764928)     1.46e-25            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MDNSSNDYWLVYPASHIAVFDAETQTWSLFEDHRGKTVYDTTTGNPIYISEPGPLPENTTTQAPASPIDKFENGQWVADLNTALIQKHAEINDWRNIQENMNYVFRFNNHNWDYGKAMQERLSLSVQMAKQNKLPDGFIWTDADNNDVPMTAGELLNLSDAIDQAMFTKGLQIHMRQRQMKEEVDKLTDYKAIKDYAVGWPE
2199033..2199425                   PHAGE_Pseudo_Lu11_NC_017972: putative tail assembly protein; SN31241_21530; phage(gi388684690)     2.90e-17            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MSKFTTPAILEMLEHYRWRVYEPFEFYLSDDNSDVIEGPAGFVTDLATIPRIFWTILPPDGKYAKAAIIHDWMYDNALRTKKEADKIFLDGMTVLGVPKWKRIIMYYAVRLFGRGMYGKEQNTVINGNGG
complement(2200291..2200710)       hypothetical protein; SN31241_21540                                                  N/A                 SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MKTHVDNIKPGQMLILTFPVGDDNFTFYEQNANVIAKLNDSARDSIINIYTYSRSLIQSFKGNNKLIEDYEKILIGMADNNNDKTMYKRLHDAKIDVMVDYAQGIKNIDAELRDAVNKGFNIIDQEVKSLQMKLNKLAS
2201453..2201530                   attR                                                                                 N/A                 CCGGTCTTGAAAACCGGCGACCCGAAAGGGTTCCAGAGTTCGAATCTCTGCGCTTCCGCCAGATTAAACAAGGGGTTA
complement(2201650..2202153)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage virulence determinant; GtgA; SN31241_21550; phage(gi169257294)     7.98e-87            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MVEYLISGAGGIDPDTEIDDDTYDECYDELSSVLQNAYTQSETFRRLMNYAYEKELHDVEQRWLLGAGEAFETTVAQEHFKLSEGRKVICLNLDDSDDSYTEHYESNEGRQLFDTKRSFIHEVVHALTHLQDKEENHPRGPVVEYTNIILKEMGHPSPPRMVYIFNK

#### region 6 ####
2983167..2983178                   attL                                                                                 N/A                 CAATGATTCAGG
2987722..2988051                   PHAGE_Entero_HK022_NC_002166: integrase; SN31241_29580; phage(gi9634144)             1.14e-19            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MGLRLSTVIERCRLVSRSEYLISAGIRKNSPNGSIHPNSLTKKFVAARKLTGINFSENPPPFHEIRSLSGRLYKDAYGEGFAQKLLGHTSENTTKLYLDERDNKAYVML
2988177..2988199                   attL                                                                                 N/A                 AAAAAGAGACCGAATACGATTCC
2988825..2988953                   hypothetical protein; SN31241_29590                                                  N/A                 SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MKQTIILAMVLINNRSRATYIQRVSELPDGIQPVLFLGLLTG
2989346..2990260                   Protein pagO; SN31241_29600                                                          N/A                 SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MRKVSISILFMLVSLTWGTTWLAMRIAVETIPPVFATGMRFMFAAPFLIIIAWLRKKTLLFPPGQRLFQFVICIFYFCIPFSLMIYGETYVNSGLAAIIFANMPVAVLIASVLFLNEKAKLMQIAGLTIAITALTGILLEETNTSTESHWQGITALISAVLIHAIIYTQCKKRSCTVSVITFNALPCLLAGLILSATGWFFERPQVSTFSVHSILATLYLGAFAGVFGILCYFALQQKANAFQASLVFLIFPLIAVSLEDYIYGYAISTHSMLLIIPLVIGIFLTLVARNIPVTSRCRDNSSQK
2990399..2990551                   hypothetical protein; SN31241_29610                                                  N/A                 SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MFLPFLLALSVAMGAINRKDKVSYILWAVLLIVTILSFIHHMTNSLTLSF
2990777..2991175                   inner membrane protein; SN31241_29620                                                N/A                 SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MVIIGSILTGVMASRQICLHIMPGDTGYGSAFFGLHFYTWTLITSILIIIAVAVVLAISSMNVAFRSLNINPDLFSIVGWVFLLLITANLISTVLECGGGECAANPVTYKLLSKQDIAFLKTGLLTRAVLRL
2991663..2991809                   hypothetical protein; SN31241_29630                                                  N/A                 SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MAHWVLKQWPQLALDAISQITFQMDNKHSSYPVCIGFVKPDVDHLHQG
complement(2992323..2992448)       hypothetical protein; SN31241_29640                                                  N/A                 SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MFANADSELILTPIIIAVLLAPGFSKSTTLAILHFFFRREK
complement(2993314..2994195)       PHAGE_Salmon_Fels_1_NC_010391: putative bacteriophage tail assembly protein; SN31241_29650; phage(gi169257205)     2.39e-88            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MYIGPHGHVVIVDADGNAETFGLMDGGVDAAITAYFGSQLQERVQQNIIREYLGEQPVGTAFVIETGNSKHPWLVPAPTMRVPLIIDGTDAVYNATRAALLAIFQHNKSAGEDRKITSVALPAMGAGCGQVPPGQRRPANCTDIAPPDIPSSHIAVFDAETQTWSLQEDHRGETVYDTTAGNQVYISDLGPLPENVTSVSPGGGYKKWDSKAQVWMNDEAAEAAARLREAEGTKNRLLQITSEKIAPLQDAVDLDEATNKEKASLLAWRKYRVQVNRVDTLKPVWPEKPASSL
complement(2994350..2994613)       PHAGE_Salmon_Fels_1_NC_010391: bacteriophage terminase, small subunit; SN31241_29660; phage(gi169257184)     1.02e-56            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MDGELKNLKCNISQLAAITGLHRQTVVSRLSGVPLALGSNEKNKLYLLTDVIRVLMETPVSQAAEHQDPNKMTPKERKNWFDSEKGR
2994668..2994856                   hypothetical protein; SN31241_29670                                                  N/A                 SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MNKKHTNHHLLKINYIKTESYNMMMMHEKSKMRQIPRRCRPVAGRPAGSTFLKCEQLSTTTT
2994921..2995088                   hypothetical protein; SN31241_29680                                                  N/A                 SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MKNIITIIVAIIIVFYAGMWSQKFLMEDECLDSGGSYNENGICNIAGSHQDVPPK
complement(2995345..2995656)       PROPHAGE_Salmon_LT2: phage-tail assembly-like protein; SN31241_29690; phage(gi16765210)     2.08e-48            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MHKRKPLNLLPLLLACLPLLASCVPKQKKLATRLDAAKHTANLAAAVRSKTTNADARMLANMLGDIAEEAKHYAGIADERYRAGMTCERVYDSVRESNNYRRH
2996353..2997300                   PHAGE_Erwini_phiEt88_NC_015295: exodeoxyribonuclease; SN31241_29700; phage(gi327198600)     5.89e-52            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MEQDTTEHHPDPQPLENEPPVSQTEAGYQKIRAELHEARKNIPPKNPVDVGKQLAAARGEYVEDISDPNDPRWVHNNYSASNQGEKEEVVPEGKQPAAEPEAVTRNADGTFDVSALFPPPSNQTEKTEARTERDGETPKESNQQETAGDTGQEITTDGGSGTGGDEAGEAADPVENGNFTVPDNIQPGIYYDIPNEAYHAGPGVSKSQLDDIADTPAIYLWRKNAPVDTEKTKTLDTGTAFHCRVLEPEEFSKRFIIAPEFNRRTSAGKEEEKTFLEECARTGRTVLTAEEGRKIELMYQSVMALTECIAGEVDQ
2997297..2998376                   PHAGE_Entero_HK022_NC_002166: integrase; SN31241_29710; phage(gi9634144)             2.46e-92            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MSRKKYDANLPRYLTYRKASKSFFWRNPVTDKEFPLGQIARRDAITQAIEANNFIAQNHTPVALIEKLKGTDSFTVSAWIDRYEVLLQRRSLSVNTYKIRSNQLATVREKMGEIILAEVTTRHIAKFLESWITEGKNTMAGAMRSVLSDMFREAIVEGHIVKNPVEATRIPEIKVARERLQLETYNATRAAAEHMPAWFPLAMDLALVTGQRREDIVNMKFSDVFDNRLYVTQIKTGMKIAIPLSLTLEAPGLRLGTVIDRCRLVSRTDFMISAGIRKNSPTGNIHPDGLTKTFVKARKASGVNFSNNPPTFHEIRSLAGRLYKNEHGEVFAQKLLGHTSANTTKLYLDERDDKAYMML
2998506..2998528                   attR                                                                                 N/A                 AAAAAGAGACCGAATACGATTCC
complement(2998749..2999102)       PHAGE_Salmon_SEN1_NC_029003: hypothetical protein; SN31241_29720; phage(gi971764937)     9.60e-12            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MKKILLPALLLATSGVALAAPQVITVSRFEVGKDKWAFNREEVMLTCRPGQALYVINPSTLVQYPLNAIAEQQVAEGKTRAQPIAVIQIDNPAKPGEKMSLAPFIERAQKLCDPSNS
complement(2999119..2999940)       Inner membrane protein YebZ; SN31241_29730                                           N/A                 SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MLVYGCALYGAWLAPAPIRRLMTRRFLHLQRHAAAWSVISAAFMLAIQGGLMGGGWPDVFSVSVWGAVLQTRFGAVWIWQIILALVTLAVVVIAPVKMQRRLLILTVAQFILLAGVGHATMRDGVAGTLQQINHALHLLCAAAWFGGLLPVVYCMRMAQGRWRQHAISAMMRFSRYGHFFVAGILLTGIGNTLFITGFTAIWQTTYGQLLLLKCALVVLMVAIALTNRYVLVPRMRQENPRTDLWFVRMTQIEWGVGGIVLAIVSLFATLEPF
complement(2999995..3000375)       Copper resistance protein CopC; SN31241_29740                                        N/A                 SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MNMASSAPSRRLALLLLASTFVTPAAWAHAHLTHQYPAANAAVTASPQALTLNFSEGIEPGFSGATITGPQQELIKTRPAKRNEQDKTQLIIPLEQPLKSGAYTVDWHVVSVDGHKTKGKYTFSVK
3000507..3000737                   PHAGE_Pectob_ZF40_NC_019522: putative DNA polymerase; SN31241_29750; phage(gi422936677)     8.51e-23            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MKTNLAQLEQAEMDKVNVDLAAAGVAFKERYNMPVVAEAVEREQPEHLRAWFRERLIAHRLASVSLSRLPYEPKVK
3005648..3005659                   attR                                                                                 N/A                 CAATGATTCAGG

#### region 7 ####
complement(3757464..3757583)       PROPHAGE_Xantho_33913: ISxcd1 transposase; SN31241_36980; phage(gi21231544)          6.43e-07            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MIYYSAQLFITLCFIHPGKPLQNACIERYNRTVGYDWLG
3757728..3757739                   attL                                                                                 N/A                 ACAAAAACCATG
complement(3758979..3759557)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage side tail fiber assembly factor & structural component; Lambda gpTfa homolog; SN31241_36990; phage(gi169257212)     5.79e-141           SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MTFKMSDTPQTIKIFNLRSDTNEFIGAGDAYIPPHTGLPANCTDIAPPDIPASHIAIFDAETGTWSLHEDHRGETVYDTTTGNQVYISAPGPLPENVTSVSPDGEYQKWDGKAWVKDEAAETAARLREAEGTKSRLLQMASEKIAPLQDAVDLDEATDKEKASLLAWRKYRVQVNRVDTLKPVWPEKPASSL
complement(3759547..3760371)       PHAGE_Phage_Gifsy_1_NC_010392: conserved hypothetical protein; contains pfam01661, Macro, Macro domain; SN31241_37000; phage(gi169257213)     0.0                 SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MIKLILSAPVPAMAVAFEHSFQNTENVEIIPGPFETIPEFDCMVSAANSFGLMDGGVDAAITAYFGPQLQERVQQHILREYLGEQPVGTAFVIETGNSKYPWLVHAPTMRVPLIIDGTDAVYNATRAALLAIFQHNKSAGEDRKIKSVVFPAMGAGCGQVSPGSVARQMKLAWDGFINCTTEINWQYASARQNAVFSTTAYCPSKALCPNARTEYIGFGDYRTYCKKSGNTCISPRHQVDDIYIGAHSHAVFLSPNSHGKHLKPEYLSGVKNDV
complement(3760368..3762740)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage side tail fiber protein; Lambda gpSft (gpN) homolog; SN31241_37010; phage(gi169257214)     0.0                 SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MPVLISGVLKDGTGTPVQNCTIQLKACRTSTTVVVNTVASENPDDAGRYSMDVEQGQYTVTLLVEGYPPSHAGVITVYDDSKPGTLNDFLGAMTEDDVRPEALRRFEAMVEEVARQASEASRNATAAGQASEQAQTSAGQAAESATAAVNAAGAAEASATQAASSAASAESSAGTATTKAGEASASAASADTARTAAAASAAAAKTSEANADVSRTAAGDSAAAAAASATAAQTSAARAGASETAAKTSETQAASSAGDAGASATAAAASEKAAAASAAAAKISETNAATSASTAAASATAASSSASEASNHAAASDTSASLAAQSSTAAGAAATRAEDAAKRAEDIADVISLEDASLTKKGIVKLSSATDSDSEALAATPKAVHAVMDEVQTKAPLDSPVFTGTPTTPTPPDDAKGLQTANAEFVRKLIAALVGSVPESLDTLQELADALGNDPNFATTITNMIAGKQPLDDTLTALSGKSIEGLIEYVGLRSTIDKAAGALPAGGTAVAANRLASRGALPALTGTTRGSDGGLIMGEVYNNGYPTQYGNILRLTGTGDGEILIGWSGTNGAPAPAYIRSHRDTADAEWSEWAMLYTTLNPPPDSHPVGAAIAWPSDATPAGYALMQGQSFDKSAYPLLAIAYPSGVIPDMRGWTIKGKPISGRAVLSQEMDGNKSHSHTARAQDTDLGTKSTSSFDYGTKSTNTTGNHTHQFGGYINSYWGDSNHTSFQPGGGAWTQAAGDHAHTVYIGGHEHTMYIGPHGHVVIVDADGNAETTVKNIAFNYIVRLA
complement(3762794..3763030)       PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; SN31241_37020; phage(gi169257215)     5.86e-52            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MSRVISLAAGVSLSVLFSTAAVADNGRGSGNSNIENQTRIYTGTDRGQKQHREAKGQIITRSVQCSLPAYLRDPDNQC
complement(3763075..3766437)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage host specificity protein; tail fiber; Lambda gpJ homolog; SN31241_37030; phage(gi169257216)     0.0                 SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MGKGGGKGHTPREAPDNLKSTQLLSVIDAISEGPIEGPVNGLQSVLVNQTPVVDRDGNTNIHGVKVVYRVGEQEQTPLEGFESSGAETVLGVQVKYDNPVTRTITAANIDRLRFTFGVQSLVEANSKGDRNPTSVRLQIHLERYGQWVVEKEITITGKTTTQYLASVIVDNLPPRPFGIRMVRVTADSTTDQLQNNTVWSSYTEIIDVRQRYPNTAVIGLQVESEQFGSQQVTRNYHFFGRIIHVPSNYDPVARTYSGIWDGTFKPAYSNNPAWCLWDVLTHPRYGMGQRIGAADVDRWALYAIGQYCDQMVPDGFGGTEPRMTFNAYLAQQRKAWDVLTDFCSAMRCMPVWNGQMMTFVQDRPSDTVWTYTRSNVVMPDEGTPFRYSFSARKDRHNAVEVNWIDPDNGWQTSTELVEDTVAISHYGRNLVKMDAFGCTSRGQAHRAGLWLIKTELLETQTVDFSVGAEGLRHVPGDVIEVCDEDYAGISLGGRILSVDRARRILTLDREITLPSSGTTLISLMDGEGLPVSVDVQSVTDGVQVQVSRIPDGVAEYSVWGLKLPSLRQRLFRCVAVRENDDGTYAITAVQHVPEKESIVDNGASFDPQPGTIHGTVPPAIQHLTTEILAEEGQYQVLARWDTPRVVKGASFSLRLNVAAEDGSDRLVSSAGTPDTQYRFRGLTPGRYTLSVRAVNSQGQQGDPASTQFSISAPAAPSFIELTPGYFQITATPRQAVYDPTVQYEFWFSDAQITDIHQVENAARYLGTALYWIAASVNIRPGRDYYFYIRAVNQVGKSAFVEATGQASNDAAGYLDFFKGQITESHLGKELLEKVELTEDNASKLQQFSKEWQDANDKWNAMWGVKIEQTKDGKYYVAGLGLSMEDMPDGKISQFLVAADRIAYINPANGNETPGFVMQGDQIIMNEAFLKYLSAPTITSGGNPPAFSLTPDGKLTAKNADISGHINAVSGSFTGEINATSGKFSGVIEAREFVGDICGSKVMQGVSIRETNDERSTSTRYTDSATYQIGKTITVMANCERNGGSGAITVTININGQVKTAEVIPYTAGLPAMYQTVVFSVYTTSPVVDISVSLRVRGQYTTSASVWPLVMVSRSGNNFTN
complement(3766499..3767005)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail tip assembly protein; Lambda gpI homolog; SN31241_37040; phage(gi169257217)     1.18e-118           SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MPGLRQKLNDGWYQVRIAGDDVTADTLTTSLHDPLPPGAVIHIVPRLGGAKSGGVFQAVLGAALIAVAWWNPAGWLGAAAVSGMYMTGASMVLGGVAQMLAPKPKMSEMRQTDNGRQNTYFSSLDNMVANGNTLPVLYGEMQVGSRVISQEVSTADEGDGGQVVVIGR
complement(3767044..3767781)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail tip assembly protein; Lambda gpK homolog; SN31241_37050; phage(gi169257218)     5.25e-148           SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MKEQDILAHARRCAPAESCGFVVRTQAGERYLPCVNISAAPEDYFRMAPEDWLRAETQGDIVALVHSHPGGQPYLSDVDRRLQVQSDLPWWLVCAGQVHKFRCVPHLTGRHYKHGVFDCYTLFRDAYHLAGIDMPDFHRDDDWWRHGDNLYLDNLETTGFYRVSAASAQPGDVLICCFGSSVPNHAAIYCGDGELLHHIPEQLSKRERYTDKWQRRTHSIWRHRAWRASAFTGICNDFAAASACR
complement(3767788..3768489)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail tip assembly protein; Lambda gpL homolog; SN31241_37060; phage(gi169257219)     2.92e-174           SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MMQDISQDTLNESAKLAQSARITLWEIDLTQSGGDRYFFCNEANEKGEAVTWQGRKYDVYPVDGCGFEMNGKGAAARPSLKVSNLYGMVTGMVEDLHSLVGATVIRRIVYARFLDAVNFQNGNQEADPEQESVSRWVIEQCSDLTAVSATFVLATPTETDGCVFPGRIMLANTCTWIYRSDECGYTGPAVADEFDNPTADPAKDACSRCARGCALRNNTGNFGGFLSINKLSQ
complement(3768496..3768825)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail tip assembly protein; Lambda gpM homolog; SN31241_37070; phage(gi169257220)     6.65e-77            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241METFNWKIRPDMTVESEPKVTSIKLGDGYEQRRPAGLNNHLAKYNVTVRIRKGEHQNLEAFLSRHGGVKSFLWTPPYTWTQIRVICRKWSINVGSLWVTVTTTFEQVVI
complement(3768828..3771923)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail tape measure protein; minor tail protein; Lambda gpH homolog; SN31241_37080; phage(gi169257221)     0.0                 SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MDQIANLVIDLSIDSAEFRNEVPRIKKLLNDAAGDSERSAARMQRFLDKQTEATRRTSASLEQVTASSTAYSSAVEKSAAASTRLAADVDQTRQRVEALGRKLREEQAQSAAVAAAQDRTSAAFYRQIDSVKQLSGGLQELQRIQAQVRQAKGRGDISQGDYLALVSETARKTRELTDAEALATQKKAQFIRRLKEQTTVQGLSRTELLRVKAAELGVSSAADIYIRKLERTGTATHTLGLKSAAARRELGVLAGELARGNFGALRGSGITLANRAGWIEQLMSPKGMMLGGLAGGVAAAVYGLGKAYYEGAKESETFNKQLILTGSYAGKTTGQLNAMAKSLAGNGVTQHDAAGVLAQVVGSGAFTGQAMAMVSRTATRMQENVGQSVDETIRQFKRLRDDPVNAAKELDRTLHFLTATQLEQIRVLGEQGRVADAAKIAMSAYSEEMNKRMGDVHDNLGWIERAWNAVGDAAKWAWDRMLDIGREDTLDEKIATLQEKIARDRKTPWTVSSSQTEYDQQQLNELQEQKRQKDLLDAKAQAERNYQETQKRRNEQNAALNRDNETESLRHQREVARITAMQYADAAVRNAALERENERHKKALSQQAKKPKTYHNDEARRLLLQYSQQQAQTEGQITAAKLSTTEKMTEAHKQLLSFQQRIADLSGKKLTADEQSVLAHKDEIALALQKLDISQQDLQHQNALNELKKKTLTLTSQLADEESRVRQQHAMALATMGMGDQQRGRYEERLKIQQHYQEQLEQLKRDSKAKGTYGSDEYRQAEQALKGSLDRRLAEWADYNAKVDAAQGDWTLGASRALDNFLAQGGNVAGMTENVFTNAFNGMADSIANFAVTGKGSFRSLTVSILADLAKMEARIAASKLLGSVLAMFGFGTSAGGSTPSGAYSSAALSVIPNADGGVYRSAGLSQYSGSIVNRPTFFAFAKGAGVMGEAGPEAILPLRRGADGKLGVVAAGSGGMAMFAPEYNIEIHNDAGNGQIGPQALQAVYNIGKKAAIDFWQQQSRDGGIAGGGR
complement(3771895..3772167)       PHAGE_Phage_Gifsy_1_NC_010392: part of bacteriophage tail assembly chaperone gpG by translational frameshifting; Lambda gpT homolog; SN31241_37090; phage(gi169257222)     3.37e-59            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MLAEMSATELGEWAEHFGKNSFSDMLLDAEFATLKSLISGLVTGTHHDAEMFSLITDPESLHEKTDDELMILGEGITGGVRYGPDSEPGH
complement(3772230..3772625)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail assembly chaperone; Lambda gpG homolog; SN31241_37100; phage(gi169257223)     2.51e-93            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MFLNTDTFNYGGHSIVLSELSALQRVDYLKFIQQRTADYDAQPETLTEAERQTEFMQMGVDINAWLVSRSLCESKKEEEARALYESVRLEWSYEALGRGADMVLSLSGMRLPASQEDDSGSEKDTTTPEKS
complement(3772676..3773422)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage major tail subunit; Lambda gpV homolog; SN31241_37110; phage(gi169257224)     3.70e-174           SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MMGTPNPLVKTKGAGTTFWLYTGSGDAFKNPLADDDWLRLAGIKDLQPGEMSADAEDDDYLDDENADWKSTTQGQKSVGDTTATLAWKPGETGQKKLVELFDTGEVRAFRIRYPNGTVDVFRGWLSSLGKTVTSKEVMTRSVKITGVGRPSLAEEDTPDVVSVSGVTVAPASATVAAGATTTLTFTVKPDNASDKTLQVATADPLIATVTLKDNVATVKGVKAGSVNIVGISSDGSLVAVAAVTVTAS
complement(3773430..3773585)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail shaft stabilization protein; Lambda gpU homolog; SN31241_37120; phage(gi169257225)     1.58e-30            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MEEKIFPALEEVSGLERLIDTMTPLGYDYQRDSEMATWGMAEITYRITYTN
3773820..3775070                   PHAGE_Phage_Gifsy_1_NC_010392: transposase; SN31241_37130; phage(gi169257226)        0.0                 SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MFAHQNASFPPRPEGRGGKEAVFRLTVFCIITFSSLTCEAMKRAYKYRFYPTTEQAELLAQTFGCVRFVYNSILRWRTDAYYERKEKIGYLQANARLTALKKEPEFAWLNDVSCVPLQQSLRHQQTAFANFFAGRAAYPAFKSKRHKQAAEFTASAFKYRDGKLYMAKNKIPLDVRWSRPLPSVPSTVTISKDAAGRYFVSCLCEFEPASLPITSSMVGIDVGLKDLFVTDTGFRSGNPRHTAKYAARLALLQRRLSKKAKGSKNRAKAHLKVARLHAKIADCRLDALHKATRKLINDNQVVCVESLKVRNMIRNPSLSKAIADASWGELVRQLRYKGEWAGRSVVAIDQFFPSSKRCSCCGFIMKKMPLDVRKWQCPECGTDHDRDVNAARNIKAAGLAVLAHGEPVNPESLKAA
complement(3775119..3775619)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage head-tail assembly protein; Lambda gpZ homolog; SN31241_37140; phage(gi169257227)     7.38e-115           SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MNRVAQKAVSVATRKVARETVAGDNQVRGLPLKLVRQRVRLFKAGTDGKRSARIRINRGNLPAIKLGAAQVRMSKRRGKLLYRGSVLKIGPYLFRDAFIQQLANGRWHVMRRVNGKNRYPIDVVKIPLSGPLTQAFESATQSLIDEEIPKQLGYALKQQLRLYLSR
complement(3775725..3776108)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage minor capsid protein; forms tail attachment site on head; Lambda FII homolog; SN31241_37150; phage(gi169257228)     6.78e-87            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MSQSENLFDTAISQADDAILRVMGTVATITSGVLAGATLTGVFDDPESVSYAAGGVRIEGDKPTFFVKTSLTVHLKRPDTLTILGDTFWVDRITPAGGDSSIILLGRGTPPTDNRRRTGGMFDCSPA
complement(3776119..3776478)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage accessory DNA packaging protein; Lambda FI homolog; SN31241_37160; phage(gi169257229)     7.18e-80            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MATKEENIQRLRELATRLGRDPDVSGSAAELSQRVMEWEEEAEAEHLPAVENDSDESIVPPGIGQRSERVLIRALRTLHICAIDPDSNRELDMVMAGNPARISQHDVDELIAAGLIIEL
complement(3776536..3777564)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage major capsid protein; Lambda gpE homolog; SN31241_37170; phage(gi169257230)     0.0                 SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MGLFTTRQLLGYTEQKVKFNPLFLSLFFRRTVTFPTQEVMLDKITGKTPIAAYVSPVVGGKVLRNRGGETRVLRPGYVKPKHEVNYAQVVERLPGEDPARLNDPAYRRLRILTDNLKQEEKAIVQVEEMQAVSAVLNGKYTMQGEQFDTVEVDFGRSAGNNIIQATGKKWSEQDRETFDPTYDLDMYCDQASGLINIAVMDGKVWRLLNGFKLFREKLDTRRGSNSQLETAVKDLGAVVSFKGYYGDLAIVVAKTSYVADNGTEKRYLPEGTLVLGNTAAEGIRCYGAIQDSQALAEGIVAATRYPKHWLTVGDPANEYTMTQSAPLMVLPDPDEFVIVTVG
complement(3777619..3777966)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage head decoration protein; Lambda gpD homolog; SN31241_37180; phage(gi169257231)     2.53e-78            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MSFTTTIEKRADNRIFAGNDPAHTATGVSGITAATPMLTPLMLDDTTGKLVAWDGQKAGTAVGVLALELDGSENLLTYWKSGTFATESLAWPKSVDAIKQANAFAGSAVSHAALP
complement(3777979..3779475)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage prohead protease; Lambda gpC homolog; SN31241_37190; phage(gi169257232)     0.0                 SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MQRNLSHIISQATSAPLLLEPAYARVFFCALGRESGINSLHIPGNNESLDQSDMALVTGDFMATGKPQARFYQVVNGIAVLPVTGTLVHKLGGMRPFSGMTGYDGVTARLQQAVSDPEVKGILLDIDSPGGQAAGAFDCADMIYRMREQKPVWALANETACSAAMLLAAACSHRLVTQTSRMGSIGVVMAHTSYAEKLKQEGIDITLIYSGAHKADLTPSQKLPESVYADYQQRMDEARKMFAEKVARYTGLSVDAVMATEAAVYDGQAIITTGLADGMVNAADAIGVMAEAINSNKTGGTMPELSAADAVTQENQRVMGILGCPEARGHEALAQMLAGQPGMSVAQAKSILAAAAPADTTSTADRILALEEAGGRETLAQTLAAMPEMTVEQARTILAASPIAAATSLHDAVMALDEAKGREELAEKLAVMPGMTTDQARDLLAAAPDKSGNAGLSMNNAFDAFMQSHSPGPISGGKGHSNDTETTLLMSIPGTSAT
complement(3779465..3781045)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage portal protein; Lambda gpB homolog; SN31241_37200; phage(gi169257233)     0.0                 SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MKRTPVLVDVHGTPLRESLGYTGGGIGFGGQMADWMPPAESVDAALLPSLRLGNARADDLVRNNGIAANAVALHKDHIVGHLFLISYRPNWRYLGMRESAAKSFVDEVEAAWTEYCDGIFGEMDAEGKRTFTEFIREGVGVHAFNGEIFLQPVWDAETTQVFRTRFKAVSPKRVDTPGYARGNRQLRAGVETDRNGKALAYHVCDDDWPVAGGERWTRIPRFLPSGRPAMLHIFEPVEDGQTRGANQFYSVMERLKMLDTLQATQLQSAIVKAMYAATIESELDSEKAFEYITAADNKDTPLVNMLANYARYYSTNSIKLGGVKIPHLYPGDELNLQTAQDSDNGFSALEQALLRYIAAGLGVSYEQLSRDYSQVSYSSARASANESWRYFLGRRRFIAGRLATQMFSCWLEEALIRGVIRAPRARFSFWEARSSWSRSEWIGAGRMAIDGLKEVQESVMRIEAGLSTYEKELAIMGEDYQEIFRQQVRESEERRAAGLSRPVWITDTYQQQIAASRQTEEEKRAT
complement(3781042..3781245)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage head-to-tail joining protein; adapter between portal and gpFII; Lambda gpW homolog; SN31241_37210; phage(gi169257234)     4.65e-42            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MATITELQEARVALHDLMTGKRVATVQKDGRRVEFTATSVGDLKKYVAELEASLCNGRRRAPVGVRL
complement(3781229..3783070)       PHAGE_Phage_Gifsy_1_NC_010392: DNA packaging protein; large terminase subunit; Lambda gpA homolog; SN31241_37220; phage(gi169257235)     0.0                 SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MQWADEYYYLPKESSYTPGKWETLPFQVAIMNAMGYELIRVVNLIKSARVGYTKMLLGVEGYFIEHKSRNSLLFQPTDSSAEDFMKSHVEPTIRDVPVLLELAPWFGRKHRDNTLTLKRFSSGVGFWCLGGAAAKNYREKSVDVVCYDELSSFEPDVEKEGSPTLLGDKRIEGSVWPKSIRGSTPKVKGSCQIEKAANESAHFMRFYVPCPHCGEEQYLKFGDGSTPFGLKWEKSKPETVYYLCEHNGCVIRQSELDQKAGRWICDNTGMWTRDGLAYFSASGEEVPPPRSITFHIWTAYSPFTTWIQIIYDWLDALKDPNGVKTFINTTLGEPYEEAVAEKLSHELLLEKVIHYAAPVPERVVYLTAGIDSQRNRYEMYVWGWAPGEEAFLIDKQIIMGRHDDEDTLQRVDAVINKKYRHADGTDISISRICWDIGGIDAEIVYKRSKKHGIFRVLPVKGASVYGKPVITMPKKRNQSGVFLCEIGTDTAKEMLYARMGAVTAPADEATPYAIRFPDNPDVFTEVEAKQLVAEELVEKLVNGKFRLLWDAKGRRNEALDCLVYASAALRVSVQRWQLDLEALATSRKSEEQDTPTLEQLAAMLAGGVNGNNH
complement(3783132..3783677)       PHAGE_Phage_Gifsy_1_NC_010392: DNA packaging protein; small terminase subunit; Lambda Nu1 homolog; SN31241_37230; phage(gi169257236)     2.10e-115           SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MNVNKKKLAEIFGCDVRTVTAWQSQGLPLVSGGGKGNEAVFDTAAAISWYAERDASIENEKLRKEVDDLRAAAESDLNPGTIDYERYRLTKAQADAQELKNAEREGLVLETELFTYILQRVAQEIAGILSRVPLVLQRKYPDLCQSHIDVVRTEIARASGRAATIADVEKWTDDFRRAQGE
3784042..3784365                   PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; SN31241_37240; phage(gi169257237)     9.95e-73            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MNVEFDKGQNSARYSGVIKGYDYDTYNFQARKGQKVHVSISNEGADTYLFGPGISDSVDLSRYSSELDGNGQYTLPASGKYELKVLQTRNEARKNKAKKYSVNIQIK
complement(3784601..3785074)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage lysis protein; Rz; SN31241_37250; phage(gi169257238)     4.28e-106           SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MMFNWKTMFVGLLLVSLIVAGRLANHYRNNAITYKYQRDTATHNLKLANETITDMTKRQRDVAALDAKYTKELADAQNRNTDLQRRLAAGSRVRVEGRCTVPTTTTTKTASTRRVGNAATVELSPVAGQNVLDIRAGIISDQEKLKYLQEYIRTQCK
complement(3785071..3785535)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage lysin protein; endolysin; SN31241_37260; phage(gi169257239)     2.85e-106           SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MQGLMMRISEKGITLIKEFEGCSLKAYPDPGTGGDPWTIGYGWTHSVDGKPVKPGMMIDEATAERLLKTGLVGYENDVSRLVKVKLTQGQFDALVSFAYNLGARTLSTSTLLRKLNAGDYAGAADEFLRWNKAGSKVLNGLTRRREAERALFLS
complement(3785507..3785755)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage lysis protein; holin; SN31241_37270; phage(gi169257240)     2.26e-52            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MAGLIAYGRLIYDGATRKNKWLEGVLCGALSLCVTSALDVVGLPVSISPFVGGIIGFVGVDKLREIAISALKKRAGVNDENQ
3786325..3786798                   PHAGE_Phage_Gifsy_1_NC_010392: virulence protein GogA; SN31241_37280; phage(gi169257241)     9.46e-113           SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MDPDIEIDDDTYDECREVLSRILEDAYTQSGTFRRLMNYAYDQELHDVEQRWLLGAGENFGTTVTDEDLESSEGRKVIALNLDDTDDDSIPECYESNDGPQPFDTTRSFIHEVVHALTHLQDKEDNNPRGPVVEYTNIILKEMGHTSPPRIAYESSN
complement(3787013..3787201)       PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; SN31241_37290; phage(gi169257242)     3.75e-40            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MKEGFYWIQHNGRVQVAYYTHGVTEDLETGQTIIGVWHLTQGDDICHNGEAEILAGPLEPPI
complement(3787290..3787366)       tRNA                                                                                 N/A                 CCGCCATTAGCTCAACTGGAAAGAGCACGGAGCTTCTACCTCTGTGGTTCGGGGTTCGAATCCTCGATGGCGGACCA
complement(3787708..3788271)       PHAGE_Phage_Gifsy_1_NC_010392: conserved hypothetical bacteriophage protein; SN31241_37300; phage(gi169257243)     1.97e-135           SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MTTQISVETLSPITHNQIPVITTELLAHLYGTKIKNISDNFLNNTTRFVVGKHFFKIEKNELREFKNRPETIGLVGKNARSLILWTERGAARHAKMLETDQAWEVFEKLEDCYFSQTLPSPTRQVQPAVDMLNIDLLIKIRDGNVKDIRQVGPDMFVGKVEQILSGLRDSGWIVIKRDLLAEKLATW
complement(3788268..3788405)       hypothetical protein; SN31241_37310                                                  N/A                 SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MVGRMGEPKGSPVGDPVTPTLYVSPPNPIGVGGGDKQNNHRRASL
complement(3788544..3789182)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage antiterminator protein Q; SN31241_37320; phage(gi169257244)     7.96e-155           SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MVATADLSGETKGQLLAWLENAQFDTKNYPRKKQRIWDEETESWITLNNPPIPGKQSLAKGSAIPLVKPVEYSTASWRRAVLSLDEHYKAWLLWNYSENTCWEHQVEITQWGWSAFAAQLDGKKMAGKTQERLRALIWLAAQDVKSELAGREVYQYKELAGLVGVSEKNWSETFTRHWLTMRAIFLRLDQASLLSVSESRSEQVAFNLYALN
complement(3789355..3789966)       PHAGE_Phage_Gifsy_1_NC_010392: NinG; SN31241_37330; phage(gi169257246)               2.36e-146           SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MAKLPRRKCANKECRQWFHPIRERQIVCSYQCASAVGKEQTRKAREAAQRKAQSLQRAAEKKERAAWRQRKAAVKPLKHWIDLTQRAVNDICRETELAEGLGCISCGTKTAFAWHAGHYRSTAAAGHLRFTRFNIHLQCDVCNVYKSGNIEAYRTALVERYGEAAVLALENNNTPHRWTVEELKEIRLAALADLRALKKLEAA
complement(3789969..3790175)       PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; SN31241_37340; phage(gi169257247)     1.34e-44            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MAMKYSWFHHHDCTTEQADTLISDYQKRGIRTGKSLNPDFITWTVSAKLPEYAHRVRTPKSLRQKVWG
complement(3790175..3790777)       PHAGE_Phage_Gifsy_1_NC_010392: conserved hypothetical bacteriophage protein; SN31241_37350; phage(gi169257248)     1.63e-146           SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MAHELQLIKQSSGILIPATPETSDILQSKIKLGAVLVAEFRQVRNPAFHRRFFALLNLGFEYWEPTGGAISANERKLVNGYAKFLAAYGGNESALLDAAEQYLEQIANRRVTNGISLCKSFDAYRAWVTVEAGHYDAIQLPDGTLRKHPRSIAFSSMDEVEFQQLYKSALDVLWRWILSRTFRTQREAENAAAQLMSWAG
complement(3790812..3790928)       PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; SN31241_37360; phage(gi966201472)     1.15e-21            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MRPLLDDEEVFTPNGFMHFIRRLGYRVTPPSDNMKSTA
complement(3791177..3791410)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage putative DNA damage-inducible protein; DinI homolog; SN31241_37370; phage(gi169257250)     1.99e-50            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MRIELVISRTKQLPEGAVPALEKELITRLQNQYENCNLTIRRGSQDGLSIVGAADGDKKRIQSILQETWESADDWFY
complement(3792393..3793091)       PHAGE_Salmon_SEN22_NC_028696: EaA protein; SN31241_37380; phage(gi966201339)         3.54e-90            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MKERGITDGLTMNQLAERNAEHVTTIAALEARCAALVAENVGLKYQEPAGYHVIKECGKVGCSVATLEEAEKTRDFWNKKWTIRPYFYSAQPASERERIRREHAEWSDKTFGDVGPVGPLKHLSKEALETAAEPGDLSELADMQFLLWDAQRRAGITDKQITRAMVEKLEINKSRQWPEPKDGEPRLHIKKHPAPVVPEEITADGIIGMHECGFVEGWNACRAAMLSKWITK
complement(3793105..3793800)       PHAGE_Escher_HK639_NC_016158: replication protein 14; SN31241_37390; phage(gi356870655)     5.87e-70            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MKPELYRAINNRDGAAMASIAGGNPEHGRVVNSDAERLVDALFMQLKQIFPAATQTNLRSDADERVAKQQWIAAFSENGIRTRKQLSAGMQKARSSQSPFWPSPGQFISWCREGSGALGVSVDDIMGEYWRWRKLVFRYPTSEQFPWRDKNPLYYHVCLELRRRGTEGQLSEKELIRAAGDILHDWEKRALAGKPIPPVCRALSAPSRDRGPTPAELLMAKYKQRKDAGLI
complement(3793797..3794681)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage replication protein O; SN31241_37400; phage(gi169257255)     2.25e-49            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MANTAEVINFPVPDVAHKEPRVADLDDGFTRIANEILEAVMHAGLSQHQLLVFMAVMRKTYGFNKKSDWVSNEQLSELTGILPHKCSSAKSALVKRGILTQTGRVIGINKTVSEWSSLPVKGTEKKPYLEKVNLPESGKKSLPESGKKSLPESGKKSLPESGNGYYPNQVNTKDTITKDSKDNSNKPPKPPRAVSFDASSVQLPDWLSSIIWSSWVEYRRDLKKPIKSQQTVTQAINLLDRCRLNGYTPEEIINRSIANGWQGLFEPDGQAKRSRDTDQESIHWNSPDAWRDFL
complement(3794773..3794979)       PHAGE_Phage_Gifsy_1_NC_010392: probable regulatory protein; transcriptional activator; lambda CII analog; SN31241_37410; phage(gi169257256)     2.07e-43            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MGISESTVSRRKAEGYFCNMAKELAFLGIQAAPPEAVLVSRNYLTAVEILADAGLKAERARPDALGWD
3795903..3796742                   PHAGE_Lactob_LF1_NC_019486: chromosome partitioning ATPase; SN31241_37420; phage(gi418489414)     1.08e-33            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MPASVISFINMKGGVGKTTLCVGIAEFMANYLGKRVLVIDVDPQFNATQSLLGHYGRVDEYLDQLQTNKITIRRIFEVPTSIMDTAQAIRPVDVITKVSDNLDVILGDINIIFDTSQESVRIFKIKRFIDDNNLRDQYDYIFLDSPPTISIFTDASLVASDFYVVPVKIDHYSILGATSLVSVVRNVRHNHNPNIRHLGFVYTNTDDELTLKTSKIKDNFEEKFSEFYFFEHKLSYVRDLMVGQQGNIPSCYTKSRSDISAISTEFALRVDQLMVSENG
3797664..3797783                   prophage protein; SN31241_37430                                                      N/A                 SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241METYITYFHYEVASTFYRSMADLKYLLGNSLYTKFKALN
3798131..3798247                   PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; SN31241_37440; phage(gi169257259)     2.42e-20            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MIDFARKPARQQAVPLNRIEVLIRRLCYLLAQKGDPDA
3798240..3798398                   PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; SN31241_37450; phage(gi169257260)     1.82e-31            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MLKQCGYCRKSIDEGKEVKNTLLYLNGSQLARKEKEYCSRQCAEYDQMAHES
3798897..3801824                   PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage exodeoxyribonuclease VIII-like protein; SN31241_37460; phage(gi169257262)     0.0                 SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MSGTNPVFLVRKAKKSSGQKDAVLWCSDDFEAANATLDYLLIKSGAKLKDYFKAVATNFPVVNELPPEGELSLTFCDYYQLAKDNMTWTQIPGVTLPSSEAAAAARQHIVDGVDTETGEVLEDHTENFGNESNSPAQATAPAPELTVVATMPLRHRVLAQYIGEGEYLYHVDASQKKEILRLEMDTDNSYVQNLLLAAENVEAFKKAIEHDIHKIVNAVKKIFPVDGKTPELATVIQFLKTWFETEHIDRGLLVKEWAKGNRVSAIQRTESGANAGGGNKTDRNPDYEYTLDTLDVEIAMATLPMDFNIYELPGSVYRRAKEIVKKKESPFKEWSAALRATPGILDYSRAAIFALIRSAHPEFYHYPGRLQGYINANLTETDHENPTEEALTAARHTPEKDAVEEANRQLAAARGEYVEGISDPNDPKWVKTGTSQPTTEPELVKNVGNGIFDVSALMQNSSTHGTETNPETTSNVQVQKADSDEKQAGDAVQAGEGDLGTGKEAVTVENQNQAETHQNNDSVSQSEPEAQQNVPESQQEEPEAAWPEYFEPGRYEGVPNEVYHAANGISSTQVKDARVSLMYFNARHVEKTIVKERSPVLDMGNLVHVLALQPENLEAEFSVEPEIPEGAFTTTATLREFIDAHNASLPALLSADDIKALLEEYNATLPSQMPLGASVDETYASYEQLPEEFQRIENGTKHTATAMKACIKEYNATLPAPVKTSGSRDALLEQLAIINPDLVAQEAQKSSPLKVSGTKADLIQAVKSVNPAVVFADELLDAWRENTEGKVLVTRQQLSTALNIQKALLEHPTAGKLLTHPSRAVEVSYFGIDEETGLEVRVRPDLELDMGGLRIGADLKTISMWNIKQEGLRAKLHREIIDRDYHLSAAMYCETAALDQFFWIFVNKDENYHWVAIIEASTELLELGMLEYRKTMREIANGFDTGEWSAPITEDYTDELNDFDVRRLEALRVQA
3801835..3802944                   PHAGE_Phage_Gifsy_1_NC_010392: RecT; SN31241_37470; phage(gi169257263)               0.0                 SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MENTNIVTTEQQAPNTISASNAIFNVQALGQLTAFANLMADSQVTVPAHLAGKPADCMAIVMQAMQWGMNPYAVAQKTHLVNGVLGYEAQLVNAVIASSSAIHGRFHYRYGGDWERCTRTQEITRDKNGKNGKYTVTERVRGWTDEDEIGLFVQVGAILRGESEITWGEPLYLSGVVTRNSPLWVSNPKQQIAYLGVKYWARLYCPEVILGVYSPDEVEQREEREINPAPVQRMSVQEITSEVSTRTSAQESAANVDAVADDLRERIDTASSVDQAKAIRADIESQKALLGTALFTELKNKAVKRYYQVNAQNKVEAVINSIPNPGEPEAAEMFAKAESTLGAAKRHLGDELHDKYRVPLDDMKPEYIG
3803020..3803226                   PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; SN31241_37480; phage(gi169257264)     1.75e-43            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MGRRACDVALAAHHEKFGDYGRQKHVTNYTVVVDGVKVPVEVVNRATSYVATAMIGVRKLRNLPAQAN
complement(3803529..3804758)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage integrase protein; SN31241_37490; phage(gi169257266)     0.0                 SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MAISDSYLKSCLGRERDKVEEKADRDGLWVRISKKGAVTFFYRFRFLGKQDKMTIGNYPEFGLKAAREEVTKWAAILARGENPRIRQSLDKAKINSQYTFEELFREWHAMVCVQKETSDQILRSFELHVFPKLGKYPAHQLTLHNWLTVLDRLAQGYTEITRRVISNGRQCYSWAVKRQLLEVNPLSEMSGRDFGIQKKMGERTLDRKEIAIVWRAIEDSRLIERNKILYKLSLIWACRVGELRQAEVSHFDFEEGVWTVPWENHKTGRKSKKPIIRPIIPEMLPLIQRAIELAPGRFVFSKYADKPMSEGFHMSISSNLVKFMLKAYNEQVPHFTIHDLRRTARTNFSELTEPHIAEMMLGHKLPGVWSVYDKYTYIEEMREAYSKWWARLMSIIEPDVLEFTPRQTG
3804832..3804843                   attR                                                                                 N/A                 ACAAAAACCATG

#### region 8 ####
3866822..3866834                   attL                                                                                 N/A                 AAAAAGCCCCGAA
3872031..3872078                   attL                                                                                 N/A                 ATGTAGGAATTTCGGACGCGGGTTCAACTCCCGCCAGCTCCACCAAAT
complement(3875831..3877534)       PHAGE_Haemop_HP2_NC_003315: orf35; SN31241_38080; phage(gi17981851)                  2.69e-154           SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MMKPVKRLYLSTDEIHLADASLVLELNSCGRGFITAQTTTDYTGKLVRLDVGYSGLLLRWFTGYVERSQPAENGYQRLFVRELAGVFERMWPCSFQHPTLRDVAGWLEENSGISIAVPDVPYSDKPIPHFTHNGTGYQLLNNLGRAFSITDYIWYPLPDGSLYVGGAEKALFAGRPVEIPAEFSQGTAGGNSMTLPVIQSLRPGVDVNGERVTKVHLTNDTMTITWTPRNRATGQPLQKTPAQRQIESHYPELASGLHLPKLARVVAPSEAVKSGNFADPFRPRYAVDVQLLDADGNPDNQTPVYSAVPLPVPMAGNDSGMFQFPPEGTLVEVAFTGGRPDKPFIRQTLPDGTSLPDIKPGEQLQQQRAEVSQRVTQAGDWVRQTDQTISETSMTRTVRADTERRELVSRETTVKATDKITVLGTATLMAGAIQQVSAGDFSQAVKGNRLASITGNEETEIAGQQSTKVAGAMNVDVGGTLTEKIAALRKSVAAGGQQIMGPTVHIGSEGVNTLTMMLDTIDLLAELAQQCASHSHPSVGTPTNAGAFNQTAAKAGQTRSKYQNIIA
complement(3877534..3878079)       PHAGE_Aeromo_phiO18P_NC_009542: hypothetical protein; SN31241_38090; phage(gi148727174)     1.42e-43            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MTSIPTLALNGEAILLKNMRVTVSQQFQDKDQSGQTSATTKSEQGAKGKELRISGEIPFKNPEILKRIFELASATDADGKRMKYRVAHEVARAVNFREATFSGMLDAPPQDGKMAWLVTFTLAEHVSVQEKREARATGKTTAKKQTASSTGQSGGQSAGEDEEKLTWFERRVLKPVNDALG
complement(3878051..3878776)       PHAGE_Haemop_HP1_NC_001697: hypothetical protein; SN31241_38100; phage(gi9628639)     4.98e-17            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MWREARLAFTDSLAALDCSVVPAHPWIHGLGQQTDNGAYLSPVNAIHYLAERLAGTGGNTDVVIMMVTGQTHENFMKGLNSLVDVFPAPAFTQVRRLAESAATLATEKMQIPAKAGAGLPVAIPLSVPTSRAALSAAAVSEAQKAAGAGFSLDGLKKQLGEFTQLRDSLINEVASGLADLQRKSARAWVFTASGDTAATLLALVKDIPQPSAVYTAAIMLAGKNLDGIRGMIHDVDPDTGA
complement(3878766..3879323)       PHAGE_Salmon_SP_004_NC_021774: tail fiber assembly protein; SN31241_38110; phage(gi526003632)     3.23e-119           SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MMKVAKNKKNEQFLNIKKFIPYTPEPEEALFPGVAHLKSEDGQDWYKCQKLFSEDTLKITYDDNDVITCITRDISGLWPAGQSVAELPDTDENRRADISGGWQFKGGKVVQRVYSPEELRKKAEDEKVRRLAEAESAIAPLARAVKLKIATDEEIKRLDAWELYSVMVNRVDTASPDWPEVPDVA
complement(3879333..3881438)       PHAGE_Salmon_SP_004_NC_021774: phage tail fiber protein; SN31241_38120; phage(gi526003631)     0.0                 SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MSQTTITLAFEQWKAQQGATGEPVLLDEFVFANVPGLDPDQPVDRNETLPPAEQIVHRQAVSRKGVVNDNAVVHSVVLGADVGDFSFNWIGLLNKASGTLAMIVHAPLQQKLKTAEGQQGNVLTRSFLMEYNGAQAETGINTPAETWQIDFTARMAGMDERQRLENIDIFGAAAFFGDGYLVGKSGNQFYVTKGTGYVAGLRTTLAENLNITVTTRPVKVWLDVCWTGTLTSVWGVQSRITVADNLADYVQNGVQHYVFAVAGIDENGNITDLRPKGTLNEQQASDALRKHEQSRNHPDATTREKGFVQLSSDTNSESEMLAATPKAVKAAMDNANGRVPSDRKVNGHPLSGDITLWASDVKAISADAIGQITDNGTMASANTPGWWRVAVSNSDTVADFPAYPDGSKLYSYGYMFVEKIGEVWFQHYYAHMGANAKRQDWGTVPNTSRPWVIDYNTANKPSAGDVGALPITGGRINGSLGIGADNALGGNSIVFGDNDTGFKWHSDGVLGIYANNALVGYIDNSGLHMSVDVLTNGAVRAGNAKKLSLTSNNNSTMTATFNLWGDANRPTVIELDDDQGWHLYSQRNPDGSIVFTVNGDITANTLRAGGAIYQNNGDIFGSLWGNGWLSTWIHNNVVKAVRLGPVALSGGLWRDFQLGGGQVVTGFHTDGSWEMEGDDDKVYYRPIQYLIGDTWVTAPSV
complement(3881448..3882035)       PHAGE_Haemop_HP2_NC_003315: orf30; SN31241_38130; phage(gi17981846)                  8.84e-60            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MNEFMKKLAGMVLPSWMDRGEPRKLLQTARRFWAEVYGWVTWPLNQFDPLTCTPALLNLLAYDRDISRFDGEPLELFRRRVAYAFVNARDAGSVEGFISIFERLGIGYVELMERQPGIDWDVIQVRVTDSQIATNTQLMIQIIRQYGRTCRRYQFEVITSERLTIRAGWDQGEYVVYPAALSGTETSNATYSAGL
complement(3882028..3883212)       PHAGE_Haemop_HP2_NC_003315: orf29; SN31241_38140; phage(gi17981845)                  5.10e-147           SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MTEKPQVDFEEVVKASGMPVTEEEIRDRFNAIATEEGIITNTSRMSPFWRLVTAIVTAPVMWLKEVLISTVLANMFVATASGSMLRLLAWAVNITPKPASAAQGVIRFYKEDASAVVTVKAGTVIQTERINGRVYELAITEDVVIASGTASALLPVKATGTGGAYNLAPGYYRILPVAVDGISHVASEENWLTVPGADEESDDELRERCRNQFNLVGNYHTDAVYRSMIAGVAGLSIDRIFFEHEAPRGPGTANAYLLLDSGVASAPFVDAVNDYINTQGHHGHGDDMQCYAMPETLHDLAVTVWVRNLNNISDDEQKRLKDGIENLIRCAFRENTDYDVRRTWPYSRFSFSQLGREIHKNFPVTESLNFSLDDIASELNVPRLKSLVVSIENE
complement(3883209..3883538)       PHAGE_Haemop_HP1_NC_001697: hypothetical protein; SN31241_38150; phage(gi9628634)     8.31e-36            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MNEILYVDLLIQGNDFVLNTGNEPELCNNRKSIGQDIIHSIIESGLATELIAERSPTMRADIFTRMELLIEDDERIVPGTVEIGEESRTRLWITASTYDFGGISVQVDL
complement(3883535..3885505)       PHAGE_Aeromo_phiO18P_NC_009542: putative tail tape measure protein; SN31241_38160; phage(gi148727166)     1.30e-82            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MKQLDFTLSLIDKLSRPLKQAQSSVTGFAEKSKAAFMQIGGGVLALAGTGMAIRGALSPAIEMYDALNDAASKGIDDQALKAVQRDALRFSTTYGASAVEFVQSTESINSAIAGLTGNELPKVTKVANTLAFALKSTAAETAEFMGQMFGNFSADAERLGKVQFAEQLAGKMVYMRKTFGTEMATIKDLMEGARGVGTNYGVGLDEQLAVLGQLNRTLGTEASSAYEGFMTGAVEGAKKLGLSFTDATGKMLSMPEMLIKLQGKYGKSLEGNLKAQAELDAAFGDSSAVVKHLYGNVALLQRNITELGGSDGLKRTQEMASKLVKPWDRFVQILKAIQTVIGLTLIPVLYPVLNRLADMGQTFARWMQLFPNIARVIGYAAMALLGFAAVGAVANIVMGVSKFIMMGWKGVWKLLTAVTKIDTAWTWLNTKAKLAWANVMKSLRGILLALRMQAIMTGTAINFMSWPVLLVIGAIALLAAGCWLLIKHWDTVKAAVMETSAFQACARVVAWLAGVFSTAWQFISEGWNSFIALLTGFSPSQALSGLASGIVSMFDNVWQSVKGGFLKSWNWIVEKLNKIPGVDISMANETSSPPLTVNNLSTGGELKGIDKGGISKSVSNNSRSVTDNSRKINTVNIYPKEMITPGQLMEFQELGV
complement(3885693..3885950)       PHAGE_Aeromo_phiO18P_NC_009542: hypothetical protein; SN31241_38170; phage(gi148727164)     1.23e-30            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MEKIKLCVCGTDIIFEPNQTAYNKFINEMAMDNKVAPAHNYLTRIVATESKEALAEILKRPGAALQLVSKVNDIYAPELEIEVKN
complement(3885937..3886125)       PHAGE_Entero_NJ01_NC_018835: hypothetical protein; SN31241_38180; phage(gi410490876)     5.63e-06            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MRYQENLKTKCVTQLPRLKGTTGKDAAELLNAYLEIYGQCAARHNQLIDEINRRESLLYGKN
complement(3886097..3886429)       PHAGE_Erwini_phiEa21_4_NC_011811: hypothetical protein; SN31241_38190; phage(gi219681271)     1.95e-11            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MDRVVAGWLITVVLAFWAGWKAANWQRDSIDLAISRSASATGETLASMASESGRKLEEQLEALKNAPPREIRTEVVKPVFTNVCLSDDFVRMYNDAAASTERALSGKPEN
complement(3886429..3886770)       PHAGE_Pseudo_PaP2_NC_005884: hypothetical protein; SN31241_38200; phage(gi48697087)     4.94e-32            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MTLSEKQQLFTVMVANLIHWAEEHGYRLTFGEAYRTPEQAALNAKKGSGITNSLHTRRLAVDFNLFVNGQYQTRTEDYLPLGEYWESLGGSWGGRFKSRPDGNHFSLEHDGVR
complement(3886767..3887060)       PHAGE_Burkho_KS9_NC_013055: holin gp22; SN31241_38210; phage(gi255033753)            6.34e-20            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MQDYEKGFIALAIMGALIALGKMLNSDEPITARLVLGRVIVGSALSVAAGVALYFVPDIHPLALAGIGSALGILGLNGVEAWLRKKGIGFLGKGADK
complement(3887070..3887525)       PHAGE_Aeromo_phiO18P_NC_009542: putative tail tube protein; SN31241_38220; phage(gi148727159)     1.02e-63            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MTKRISGMSFDAYIDGELIHIEKISLDITDNSAAAQTRGVPDGHVDGDVAAEGEIEVSSKVLQVLTAKARAAGSWRGIEPLDFLFYAKAGSEEVKVETFGNKLQLSNLLDIDPKGGSVSTHKIKYFVTSPKFVNINGVPYLEAEATENLIG
complement(3887522..3888649)       PHAGE_Haemop_HP2_NC_003315: tail sheath; SN31241_38230; phage(gi17981837)            7.35e-139           SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MTWPTVTVNQVNQLLGETNEVERTLLFIGTGTKNVGKTLAVNAQSDFNALLGEGNSPLKSDVLAAMANAGQNWWGFVHVLAADSEPGAWVDAVKAAQVSCSVEGVVLSDDVAAKEQINQAATLRSELIAQYGRWVWFILAVQGMQEDEAQADYLKRLSTLQQGIAEKAVQLVPRLWGNEPGVLAGRLCNRAVTVADSPARVKTGALLNLGSDELPEDGTGKTLELATLKALEAQRYSVPMWYPDYDGFYWADGRTLDVEGGDYQSIETLRIVDKAARRVRLLAIGKIADRSLNSTPGSIAAHQTLFARPLREMSTAANINGVSFPGEVKPPQDGDVSIVWKSKKAVDIYIVVRTYEVPLQITISLLLDASLEAAA
complement(3888646..3889353)       PHAGE_Aeromo_phiO18P_NC_009542: putative tail completion protein; SN31241_38240; phage(gi148727157)     5.42e-42            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MIAGGELNKKQLTELRKALASMELPPQKRQRLIWRLAKYGVIAAAKRHVRNQESPDGQKWPGRKTKRKGKMLRNLPKLLHIREMPEIQAVRIYLQGGGYRNGETPVPAGTVGYAQQNGMRVKVSRSSQPRKADAGKMATPAQAKKLRALGYRVRTGKRWKKPTLGDITRTMPYSQAGLLIRKLSGKAVKTSWTVDLPARVFLGMNDDEFDKALARQLQAIGFGWNVKAQDIKGKT
complement(3889350..3889856)       PHAGE_Haemop_HP2_NC_003315: orf21; SN31241_38250; phage(gi17981835)                  1.63e-14            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MSQTQIQSLTAFFQENVPPRAMQSFDSVLDEMKFIPAAKDYGLGQYRQAVIRYDAVLSWARFPYRLCPPQLLMSLLAAWLDDADRDLLDEVGLSEAEPDWDVSVEDEETATVVLTVPMVEELVIRQDENGAIPWRGERWSLADPEIWTALTASIFSVDETGAPVSGEI
complement(3889853..3890341)       PHAGE_Vibrio_K139_NC_003313: putative head completion protein; SN31241_38260; phage(gi17975130)     3.97e-35            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241METGQSAFFGGFMFSGKPLDYQDEPLANNGFWPDLNLKDFQVQRSLPPDIDADTISQALLAAVAEVNAELENVEASWKAKGHTLAADVPGVKMGGLNSLCAQYMKAVFARAKADLLGEFATIGRRDTHPGQESQETRAGLLAEASVVIRRMKGLKRATVKKV
complement(3890402..3891103)       PHAGE_Aeromo_phiO18P_NC_009542: terminase endonuclease subunit; SN31241_38270; phage(gi148727154)     6.75e-67            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MALSPAQRHSQRIAMEQKLKRSQALETTESMHLLVKALETDVGHVRSLPTIADRIEFKRDVLLPRWVPTVEAYLESKQVYANPVFAWCVIWLFDVGELDQALEWADIAISQQQATPDQLRSNFPTFVADTMLAWAQESAGRGESIEPYFSRTFERVAGVWRLHEQVTAKWYKFAGLELLRNEDGQQTAAGVDDIETLEKADHLLAIAEKHYSKIGVRTARQTIAARVRKLTQG
complement(3891107..3892129)       PHAGE_Aeromo_phiO18P_NC_009542: capsid protein; SN31241_38280; phage(gi148727153)     1.77e-114           SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MHLNNRARELLDGYSAGMAQQFGARDASRYFSLNNPQENALRLALLESVEFLDMLTCLDVDQLSGQVISVGSSVLHTGRSESGRFIRQVGVDGNDYSLVETDSCAALRWDLLSVWANAGKDENEFYNLVQAFTTQAFALDMLRIGFNGKSRAKTTDPEANPNGEDVNIGWHERMKTLLGGNQIMTDPVVLDAAGDYKSLDAMASDLINAKIPAQFRNDPRLVVLVGADLVAAEQYRLYQAADRPTEKIAAQLLGNTIAGRPAIIPPFMPGKRMVVTPLKNLHIYTQRNTRMRKAEFVEDRKQFENKYLRNEGYAVEVPELYAAIDESAVTIGKVSEPAEG
complement(3892191..3892994)       PHAGE_Haemop_HP2_NC_003315: capsid-scaffolding protein; SN31241_38290; phage(gi17981831)     1.45e-42            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MSHLKTDWLCVATEGDTVDGRIIKRQWIIDMGETYDYNHYVALIWPEHEDDYGNFGEVLEATWNDGEDGLARLYVSLCPNIRLIFANHEDQLLFFSIEPEENWRGSGRTYLKGLAVTDTPASVGTTRLRFSSRRKKLSKQGYYGCVISRDGKIKQEERMKNWQKLFGIKPKFEDETPPDDTTQGDDKLQALANAVNELEGRVAKIENQLNDVQGDVDTIAEVVDTEEFAAIRDNAKDIVKRFNDLGNKSVRTPGRKISEKAGKFNFL
3893034..3893147                   hypothetical protein; SN31241_38300                                                  N/A                 SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MPNKTIAALRFILNSSDITLYRMQTNYHHRFFITATA
3893155..3894930                   PHAGE_Vibrio_K139_NC_003313: terminase ATPase subunit; SN31241_38310; phage(gi17975126)     0.0                 SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MAKYSEELKGVVRALYLRRYTPKEIASELNLPNARIVYYWAEKYRWADLLSFESTEEAIERRYQLLASRDNKTDLDLKEMDMLIAHATKLRAQSNKHKEKMASGQNSGQADARDSNDDEPRRKRKYKKNDISSLTQADFDTWAEEHLFEYQKHLRRNIGQLVRNILKSRQIGATWYFAFEAFENAVMTGDPQIFLSASKVQAEYFRSYIVNIAEQYFGITLTGNPIRLSNGAELRFLSTNKNTAQSYSGHLYCDEYFWVPNFTKLNEVASAMATHDKWRTTYFSTPSAKTHQAYPFWTGDEWKQGSKKRTAIKFPTFDELRDGGRVCPDGQWRYVITMEDAIAGGFNLANIEKLRNRYNTATFNMLYMCVFVDNKDSVFSFSDLEACGVEVDTWQDHNPDAARPFGDRPVWGGFDPARSGDLSCFVIVAPPMFAVEKFRVLKVIYWKGMNFRYQAKQIEQLFKKYNFTYLGVDVTGIGQGVFDNIQHFAMRVAVAIRYDLNTKNQLVLKAADVVESQRIEWDKNLKEIPASFMSVRRTTTQSGNAMTFVADRSQDTGHAEAFWAITHALHNEPLNYENKPKSRWNLRNKAA
3894927..3895988                   PHAGE_Haemop_HP1_NC_001697: portal vertex protein; SN31241_38320; phage(gi9628619)     4.84e-102           SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MSKKKHFIKRDQRGDKSKKMSIITFGKPEPVLTTGTDYRDIWYDNAADHFTQPIDRLALAQLINLNGQHGGIIHARKNMIVSDYLSGGLTYDQLEAAAFDYITFGDIALGKIRNGWGDVIGLEPLPGLYIRRRKDRNNATDQPGDYVVLQEGEPQIWPEEDIIFIKMYDPQQHIYGLPDYIGGVHSALLNSEAVIFRRRYYHNGAHTGGILYTRDPSMTDEMEEEIEQQLRDSKGIGNFSTILVNIPGGDGDAIKFIEMGDISAKDEFANIKNISAQDILNAHRFPAGLAGIVPQNTAGLGDVEKAERIYKKSEVAPVQRRFMMAVNNDPEIPERLHLNFDLSYAESTDKGAA
complement(3896282..3896479)       PHAGE_Salmon_RE_2010_NC_019488: hypothetical protein; SN31241_38330; phage(gi418489693)     9.20e-08            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241METIALQRIALFTRLIANSKCTGCEKDIALAWLSELTSDLENKLDEYEGKSPQKGGLSGGRSRFQ
complement(3896613..3898634)       PHAGE_Salmon_SEN5_NC_028701: replication protein; SN31241_38340; phage(gi966201551)     2.42e-154           SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MTLAVNEQCYAVDAWRRETFAPGTPADVTITERRLWAVNPQDHKWRAQYLHEIPDWLAGYFGRRYEKLFAGRDGRRRANTFLRQTIGGSVLPRLRKVATRYKLAADAIDLPFGKSLERLPSLDRPELKKLAGQISGWISQSLYDFTERFDYGTDDAKELHRRTMESYRYLCACSLMLNNQPPYWAEHEANAGQLETRKAESGILRMMAPEWWYLRLKRARDVQREHMAIAVGQVQKAASAYVSRKTLGEWIEQKKQNLEFFKKFDLLNDEGLRIALDSMVHRSVANPAIRRCELMVRMRGFEDMANEEGLAGEFYTITAPSRFHAVHSKGGFVSQWDGSTPQDTQRYLCGVWAKARAAISRAGIHVFGFRVVEPHHDGTPHWHMLLFMRPQDVDTVRDILCYHARITDSEELQTPNALKARFHVEAIDPAKGSATGYIAKYISKNIDGFALDGEQDEETGENLRDMAKSVSAWASRWRIRQFQQIGGAPVTVWRELRRLRDQVLTDRRMDAVLAAADVGDWAAYTQAQGGALVARRDLVVRLAYEITEQGNEYAEDVQRVQGVYSPLVPDSEVCTRLVKWQKVAKLAEASAEAGFSGGNAAPWSSVNNCTEGGTRRRLKLELRSRGFDGSDEEIDILERGGGLRFGQSALIYRNGRLQEKQNEPMQELWPGWF
complement(3898631..3899464)       PHAGE_Salmon_RE_2010_NC_019488: DNA adenine methyltransferase; SN31241_38350; phage(gi418489691)     1.16e-96            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MAVKTPLKWVGSKARLMPKLRPHLPEGKRLVEPFAGSCAVMMNTDYDEYLIADVNSDLIHMYRAIQEAPDMFIWEAKGLFELGNNASVYYDIREQFNTSTDATELWRAVAFLYLNRHGYRGLCRYNQRGAFNVPYGNYKKPYFPEDEIMSFAKKAKRATFITAHYSETLDLVRDGNDVVYCDPPYLTDSDNFTAYHERGFSHMDQGRLARKLRRLAERGIQVVASNSDLEMVHYLYAGFEALKVNAPRSVGAAAASPKMAAELILKWPSAATCEVSA
complement(3899454..3899783)       PHAGE_Yersin_L_413C_NC_004745: hypothetical protein; SN31241_38360; phage(gi30065743)     7.23e-17            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MAIKVHTLKIAPKYLNAVVAGQKKAELRKNDRNYKVGDVLSLKEWSHGKYTGREWSAVITHVLPVNEVVAGFESWVVLSINSMSLFDVAAYLYTNGGLFQLLAEAKNGR
complement(3899774..3900004)       PHAGE_Escher_pro483_NC_028943: hypothetical protein; SN31241_38370; phage(gi971758506)     3.71e-05            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MAQISSEVNVTTPLSNYQEILKKAVDEGKAAAAVLFSSRLDKLATHADTEGLNAAEIIELLREESVTFSKGGAAWQ
complement(3900072..3900473)       hypothetical protein; SN31241_38380                                                  N/A                 SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MSIISVEGKSLGAELAVWGVPHNYAVAFAEKSASKNGRIALHPFFFNDTEHMTNQRHWLAINAAFWCCVYREAESKEAQIEALAGIRAIFYTAGALGVGEIKALIQEWWRTTYELHLIPAPNYSAVTTQPAFH
3900531..3900764                   hypothetical protein; SN31241_38390                                                  N/A                 SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MFLVLMGWTIFTGRSAVRLEKSLSRKLPNPLKVKRAREIPWRSCIMSRYSNRSKSSRQQQLLKLRLKTPDLELIAAA
complement(3900888..3901115)       hypothetical protein; SN31241_38400                                                  N/A                 SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MKAFVTYLKKESPAMQLPSGSTGWIELPNGQRWNPGHTYKFNAHESVQMKGGSVLRFLTTKTRRLLGMVGGRYGN
complement(3901125..3901628)       PHAGE_Salmon_Fels_2_NC_010463: bacteriophage regulatory protein CII; SN31241_38410; phage(gi169936061)     9.78e-47            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MFDYQTSKHAHFNAACRAFALAHNLEDVAAAVGMRPQLLRNKLNPLQPHRLTCDELLAITDHTEDARLLDGMLSQINCLPSVPVNNATEANMQFCALSATASVGAIAGEAVSTEHMTAARRTQILDRARDAIRSLSVLAYTVESRIHSAPVLAAAVDLVTTNATGLM
complement(3901666..3901869)       hypothetical protein; SN31241_38420                                                  N/A                 SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MTSTVSTYSENRWVDLNTFCERSGVPLRRARYWYQNGRLKIKPKDKRGERVYVDWLAWTADQSPWVS
3902294..3902581                   PHAGE_Haemop_HP1_NC_001697: CI repressor; SN31241_38430; phage(gi9628606)            2.91e-10            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MKTASFLFDKAMLPDHVGNPEIITEGNAKYLVDRADYPAADGKYLIEYSETQSIKELTLLPGNKLRIDWGKYPLDCEIGDVKIIGKVIMTMVVNT
3902581..3903591                   PHAGE_Salmon_Fels_2_NC_010463: integrase; SN31241_38440; phage(gi169936064)          1.48e-176           SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MAVRKIDSGEWLCDLRPTGVKGKRIRKKFATKGEALAYEKYIASEMEEKPWLGEKQDNRRLSELIEQWHDLYGRTLSDADRMMSKLKGICAGMGDPIAAQITSADFSQYREGRLKGEIPDVNGRLMPIQPQTVNHEQRNLSAVFGTLKKLGHWSLPNPLAGIPTFKVDEKMVSFLYPEEIKSLLQYLSESSSDSVLIITKICLATGARWSEAENLEGAQVTPYRITYKNTKNGRVRSIPISKELYDEIPKKRGRLFTPCRKTFERVVAKAGIELPDGQCTHVLRHTFASHFMMNGGNILVLKEILGHSDIKMTMIYAHFAPTHLEDAVLKNPLANL
3903708..3903755                   attR                                                                                 N/A                 ATGTAGGAATTTCGGACGCGGGTTCAACTCCCGCCAGCTCCACCAAAT
3903937..3905130                   PHAGE_Entero_P4_NC_001609: integrase; SN31241_38450; phage(gi9627511)                2.13e-77            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MARTTRPLTNTEVLRAKALEKDLTLHDGDGLFLIVKTSGKKLWRFRYQRPATKQRTMMGLGAFPALSLADARGLRADYLALLANGIDPQIQAEVVEEQQQIALDSIFSTVAANWFQLKSKSVTPDYAKDIWRSLEKDVFPAIGEIPVQQIKARILVEALEPIKARGALETVRRLVQRINEIMIYAVNTGLIDANPASGIGMAFEKPKKQNMPTLRPEELPKLMRSLVMSNLSVPTRCLIEWQLLTLVRPSEASGARWAEIDLYAKLWTIPAERMKAKREHIVPLSPQALEILEVMKPISAHREHVFPSRNDPKQPMNSQTANAALKRIGYGGKLVAHGLRAIASTAMNEAGLNSDVIEAALAHIEKNEVRRAYNRSTYLERRKELMSWWGNFIVNSK
3905141..3906256                   hypothetical protein; SN31241_38460                                                  N/A                 SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MSTREFPCKASNIYDKNINFLFGSGASASYIPTLWLAENTTYETLLTHEDCKDVKDFILCSYFNKIIRKTFCIEPALENKKYTSTIASYTNFLDELVTLLEKKGSNQIRRANIFTTNYDLFFETAADNALSKKTFHFNDGAIGFKNRRLNISNFHITTWHQGTHDMYKHELPTVNLIKMHGSVSWKRNEHETISINYPITSPERIKLETDKTIDDLVATLNNTNDNLANYLDLNLNDKNLLDEFRSYYDSLAIVNPTKEKFSETVFQQHYYQSLRLLSYELEKPQTVLICFGFSFQDEHILEIIKRSLSNPTLKVFVFCYSNKSKRDINTTVNDPRITYIFPKEDEHKISFDTFIDRIFKSEIGDWVTWTN
3906244..3908013                   ATPase; SN31241_38470                                                                N/A                 SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MDELNIGKVTQVKGTTVKAKINHDLYQSTYFHNGKILRGISINEFVLVRKGYQDIVGKIIGEEIVENFNIRIDDIEQKKYERFVELNILGYFFEGKFFSGIKYLPMINDRLYLISDDKISEIYSFSKNTKTPLINIGRSMLEELPINIPINGVFNSHIGIFGNTGSGKSNTLAKLYQSLINRIDNIELFSSKSKFVLIDFNGEYGTLENSFPELCQSIKLSTKKDSGKIHFGEKEFWDDELLSVLFSATEKTQKPFLTHLIKSKLKYDDDLGEYLKRTIKIMFGTNPHKETVNLLKSLIPYFEEGDQQKIIDELSLFTWHSGQDKYTHPDSWLDNTTEVMQHTQATYNSNFNVTSVFDEIAIRATLQLINSVSRNYVQYDHIYPLINKIIAMSSSLAKVIEINDVQQNNKPISIISLKECNQSIKKTIPMMIAKCSFLEHKSSDNKIESFHLIIDEAHNILSESSVREAETWKDYRLELFEEIIKEGRKFGYFVTISSQRPFDISPTIVSQLHNYFIHRLVNENDLYLLKNTLSTLDAASRTLIPTLPPGACIISGTAFHTPLLVQIDRLAEESAPQSDTLDLENLWDL
complement(3908220..3908786)       PHAGE_Entero_P4_NC_001609: amber mutation-suppressing protein; SN31241_38480; phage(gi9627520)     2.05e-70            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MTTLTLQQACDACQTNKTAWLNRKTELAAAMQEYQELLLDDNVSGSRRLQMLRDLIDVKKWEVNQAAGRYIFSHEEVQRISIRNRLHDFMQQNGAELAAALAPELMGIKNQPAMIKNRALDRSVSYLREALSVWLTAGNDINYSAQDKDILTAIGYRPDAPSRDDNREKFTPVQNMIYTRRRAGLAAQ
complement(3908803..3909048)       PHAGE_Erwini_ENT90_NC_019932: transcriptional regulator; SN31241_38490; phage(gi431810990)     2.42e-17            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MMRCPFCRTAAHVRTSRYMSDSVKESYLQCQNVHCSATFKTHESIFEVIRSPVVDEKPAPVPTVPVAPRRVKGCYSSPFRH
complement(3909045..3909740)       PHAGE_Entero_P4_NC_001609: head size determination protein sid; SN31241_38500; phage(gi9627518)     5.72e-104           SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MERLETARSAHLANASRMDETTTAISQVQTQKNELEQENGNDSGAWRAAFRAGGAVITDELKQRHLARVARRELAQECDSMNEVLSFELDRLKGACDRTARAYRQAHHGVLSQYAEHELDAALRESCGALIRAMKLNILVLNNPLANTTGHQGYIEPEKVVMQQVKAWLEQAVKGCNIRLTDEPVLFKTGLSASTLPHMEHDVATTPGQRKVWQEKMREREADLKARGLLS
3909708..3909884                   hypothetical protein; SN31241_38510                                                  N/A                 SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MRRAGSLKAFHCRFKVVGNNSGLSHVGSPLRFNLRRFCRARHNNTIHCRCGKNGTNRP
3909854..3910000                   hypothetical protein; SN31241_38520                                                  N/A                 SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MWQKWHKQTLKPGWPEKGLRKTLLTVCFFTYNYSLLFTEKKKISNTAR
3910323..3910589                   PHAGE_Entero_P4_NC_001609: transcriptional regulator; SN31241_38530; phage(gi9627517)     4.05e-42            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MHTAFSSPSSAPAAPLMPVSDTVHERFIRLPEVMHLCGLSRSTIYDLISREAFPKQISLGGKNVAWAQSEITAWMADRIAERNRGYDA
3910853..3911143                   PHAGE_Entero_P4_NC_001609: putative CI repressor; SN31241_38540; phage(gi9627516)     1.92e-37            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MKAGYANPVRAATSEIGVSGGSFSNYFKEAAIMATTLTQSHPQFVFVFAAVRRADRKPRICMLRTVAGDEHAARLSLVRDYVLSFAGRLPVAEAHA
3911188..3911367                   bacteriophage protein; SN31241_38550                                                 N/A                 SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MRNVGQLVGDLMQVQDCATVRRDPAQQLQLTSVIYLMTAQLDGVVERCNQHWLTGEGNV
3911364..3911684                   PHAGE_Entero_P4_NC_001609: hypothetical protein; SN31241_38560; phage(gi9627513)     1.28e-64            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MKKPLPPVLRAALYRRAVACAWLTLCKRQHRHPHLTLDALESAIAAELEGFYLRQHGEEKGRQIACALLEDLMEAGPLKAAPSLSFLGLAVMDELCARHITPPVLH
3911699..3914032                   PHAGE_Entero_P4_NC_001609: DNA primase; SN31241_38570; phage(gi9627512)              0.0                 SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MKMNVTETVKQACGHWPRILPALGVKVIKNRHQSCPVCGGSDRFRFDDKEGRGTWFCNQCGAGDGLKLVEKVFCVTASEAAQKVNAVTGNLPPVAPEMIAAAKAGTETDHKAAAALAVRLMEKTQPATGNAYLTRKGFPALECLMLTAIHKTGGVTFRAGDVVVPLYDDTGALVNVQLINADGLKRTLKGGQVKGACHIIEGQKQPGKRLWIAEGYATALTVHQLTGETVMVALSSVNLLSLAGLARQKHPACQIILAADRDLNGDGQSKAAAAAGACEGIVALPPVFGDWNDAFVQKGEEATRKAIYDAIRPPADSPFTTMSEAEFTAMSTSEKAMRVHEHYGEALAVDANGQLLSRYEAGIWKIIPPSDFARDVAGLFQRLRAPFSSGKIASVVETLKLIIPQQDTPARRLIGFRNGVLDTATGTFSPHHKSHWLRTLCDVDFTPPVEGETLETHAPDFWRWLDRAAGGRQEKRDVILAALFMVLANRYDWQLFLEVTGPGGSGKSILAEIATMLAGEDNATSATIETLESPRERAALIGFSLIRLPDQEKWSGDGAGLKAITGGDAVSVDPKYKDAYSTHIPAVILAVNNNPMRFTDRSGGVSRRRVILHFPEQIAPDERDPQLKNKIARELAVIVRQLMQKFSDPMTARALLQSQQNSDEALSIKREADPTFDFCGYLEALPEPEGMYIGNASIIPRQPRLYLYHAYLAYMEAHGYRNTLSLTMFGKGLPAMLKEYGLSYEKRRKNQGIQTNLALREESNADWLPKCDEPIAK
complement(3914873..3915289)       PHAGE_Salmon_SSU5_NC_018843: putative repressor of phase 1 flagellin; SN31241_38580; phage(gi410491531)     8.17e-15            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MSNNARIIIGYIAKFNPRENFILASDKPKGNKRIEVKLESLAILEELSGNDAFNLSLMPTDEFNLQQYTPSRRDYFSICNKCYKQGVGIKIYMKYGQVLTGKTTGVNACQVGVRTSNGNHMQVMFDWVSRITSSDYAE
3915439..3915451                   attR                                                                                 N/A                 AAAAAGCCCCGAA

#### region 9 ####
4689831..4689842                   attL                                                                                 N/A                 GTGAAATCAGCG
complement(4702769..4703938)       PHAGE_Salmon_SP_004_NC_021774: tail protein; SN31241_46270; phage(gi526003638)       0.0                 SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MITGMTIDAGASFAPAFMLTLNSQDITSNFSDRLISLTMTDNRGFEADQLDIELDDTDGKVELPLRGAVLTLWLGWQGSALLNKGDFTVDEIEHRGAPDTLTIRARSADFRGTLNSRREESWHDTTLGELVSTIAKRNKLTASVADSLKKIPVPHIDQSQESDAVFLTRLADRNGAAVSVKAGKLLFLKAGSAMTASGKPVPQMTLTRSDGDRHQFAIADRGAYTGVTAKWLHTKDPKPQKQKVTLKRKPKEKHLRALEHPKAKLVSKKTKAKKEPEAREGEYMAGEADNVLALTTVYASKAQAMRAAQAKWDKLQRGVAEFSITLALGRADLFPETPVRVSGFKRVIDEQAWLISKVTHSLNNSGFTTGLELEVKLSDVEYKAEDDDG
complement(4703935..4704402)       PHAGE_Salmon_SP_004_NC_021774: hypothetical protein; SN31241_46280; phage(gi526003637)     2.59e-105           SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MFVFERRTLPYQSMQHSKNYRWASNDRVGKPPAYQFLGKGENAIQLAGTLYPAITGGRISLLAVELMADEGRAWPLIEGTGNIFGMYIVETVSTTHTEFFSDGAARKIDFTLSLKRVDESLTAMFGDLNKQASELLGSAGNLTDKLQGALGGLTA
complement(4704432..4706873)       PHAGE_Salmon_SP_004_NC_021774: phage tail tape measure protein; SN31241_46290; phage(gi526003636)     0.0                 SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MSNNLRLEVLLKAVDQATRPLKSIQTASKTLSGDIRNTQKGLRDLNGQASKIDGFRKASAQLAVTGQALDKAKREAGELAAQFKNTTSPTRAQAQALEAAKRAASELQMKYNSLRTSVQRQRSELMQAGINIRTLSADERRLKTSISETTVQLNRQREALARVSAQQAKLSRVKERYKSGKELAGNMAAAGAAGVGIATAGTMAGVKLLMPGYDFAQKNSELQAVLGVDKQSPEMQALRKQARQLGDNTAASADDAASAQIIIAKGGGDAAAIAAMTPVTLNLSLANRKTMEENAQLLMGTKAAFQLSNDAAAHIGDVLSTTMNKTTADFQGLSDSLSYLAPVAKNAGVSLEQAAAITGTLHDNNIRGSMAGTGGAAVITRLQAPTGKAYDALKELGVKTSDSKGNTRPLFTILKEMQASFERNKLGTGQKAEYVKTIFGEEAMKSASVLMAAATSGKLDKLTATIKASDGKTEELVKVMQDNLGGDFKEFQSAYEAVGTDLYDQQDSSLRKLTQTATQYVLKLDNWIKDNKELAETIGIIAGGALALIGIIGGIGLVAWPVVMGINAIIAAAGVLGTVFTVAGSAIVTALGAITWPIVAVGAAIVAGALLIRKYWEPISAFFTGVIEGIMSAFAPVGEMFAPLAPIFDGLGEKLRGVWQWFKDLIAPVKATQETLDSCKNVGVIFGQALADALMLPLNIFNKLRGGLDVILEKLGLVKKESSSIDTETAKTPLVGQGGGYIPTTSSLGGYQAYQPVTAPAGRTYIDQSSPTYQINLPGGGAPGGQLGNQLQDALEKYERDKRAKARASMMHD
complement(4706866..4706985)       PHAGE_Salmon_SEN1_NC_029003: putative tail protein; SN31241_46300; phage(gi971764932)     6.18e-22            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MADIAVIFHWPPSELCSLSLTELITWREKALQRSGNHNE
complement(4707018..4707353)       PHAGE_Salmon_SP_004_NC_021774: hypothetical protein; SN31241_46310; phage(gi526003635)     2.31e-73            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MAKAPRKTAEFIDTAGNETDTVNPNVVTLDKPIKRAGQTIDKVTLIEPNAGTLRGVSLAAVAQSEVDALIKVLPRMTYPALTAQELTAMNLPDMLSLAAKVIGFLSPASAE
complement(4707416..4707934)       PHAGE_Salmon_SP_004_NC_021774: major tail tube protein; SN31241_46320; phage(gi526003634)     2.12e-123           SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MALPRKLKYLNMFNDGLSYMGVVESVTLPKLTRKLENYRGGGMNGAAAIDLGLDDDALTVEWSVGGLPDVALWAQYAAPGADAVPLRFAGSYQRDDTGEIVAVEVVMRGRHKEIDGGENKQGENTSTKLSTVCTYYRLTIDGSDVIEIDTVNMVERVNGVDRLEQHRRAIGL
complement(4707950..4709137)       PHAGE_Salmon_SP_004_NC_021774: major tail sheath protein; SN31241_46330; phage(gi526003633)     0.0                 SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MSDFHHGTQVIEINDGTRVISTVATAVVGMVCTASDADATLFPLNEPVLITNVQSAIAKAGKKGTLAASLQAIADQSKPVTVVVRVEDGTGDDEEAALAQTVSNIIGGTDENGKYTGIKALLTAQAVTGVKPRILGVPGLDTKEVAVALASAAIKLRAFAYVSAWGCKTISEAMEYRKNFSQRELMVIWPDFLAWDTVKNTTATAYATARALGLRAYIDQTVGWHKTLSNVGVQGVTGISASVFWDLQASGTDADLLNEAGVTTLVRKDGFRFWGNRTCSDDPLFLFENYTRTAQVLADTMAEAHMWAVDKPITATLIRDIVDGINAKFRELKSNGYIVEGKCWFDEESNDKETLKAGKLYIDYDYTPVPPLESLTLRQRITDKYLVNLAESVNS
complement(4709272..4709841)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage side tail fiber assembly protein; Lambda gpTfa analog; SN31241_46340; phage(gi169257321)     1.03e-121           SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MAFKMSSKAQTIKIFNLRSDTNEFIGIGDAYIQPHTGLPANCTDIAPPDIPASHIAVFDAETGTWSLHEDHRGETVYDTTTGNQVYISAPGPLPENVTSVSPDGEYQKWDGKAWVKDEAAEKAAQLRQAEETKSRLLQMASGKIAPLQDAVDLGLATDEEKSQLAEWKKYRVLVNRVNTSSPDWPDIPS
complement(4709841..4711583)       PHAGE_Salmon_SEN1_NC_029003: putative tail fibers protein; SN31241_46350; phage(gi971764927)     0.0                 SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MSTKFKTVITTAGAAKLAAATMPGGKKINLNVMAVGDGGGKLPDPDAGQTQLVNEVWRHTLNKISQDNRYSNYIVAELVIPPEVGGFWMRELGLYDDEGTLIAVANMAESYKPELAEGSGRAQTCRMVIIVSSVESVALSIDSTMVMATQDYVDDRLAEHEKSRRHPDATLKEKGFTQLSNATDSESETLAATPKAVKAAYDLADAKYTAQDATTTRKGIVQLSSVTDSNDENQAATPKAVKIAMDNANKRLAKERNLADLTNIQQARQSLQLGNSATLNVGTTPDTVAAGDDARIITTKKAIDDTQIGLGAQPVMWVSSADDLSSLPSGARRFASNKVPATILPVNDYVFLEVIAKRDCVDGCAVLITDSIGNTWIGARWDATNGSGFTWRPMMSCPPGVPLPWPSDTIPAGYALMQGQAFDKNVYPLLAIAYPSGTIPDMRGWTIKGKPVSGRAVLSQELDGNKSHSHGARALDTDLGTKGTSSFDYGTKSSNTTGGHNHSAGGTYGGDSIGGKARVQRDGNDQLTSWNGDHAHTTWIGPHDHTVYIGPHGHVVIVDADGNAETTVKNIAFNYIVRLA
complement(4711594..4712124)       PHAGE_Salmon_SP_004_NC_021774: phage tail protein; SN31241_46360; phage(gi526003630)     1.11e-124           SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MNDSRLLPVGSSPLEVAAARACAEIERTPVNIRALWNPDTCPENLLPWLAWAFSVDRWDENWPEGTKRAVIRDAYFIHCHKGTIGAIRRVVEPLGYVINVTEWWESGDPPGTFRLDIGVLESGITEEMYFEMERLIADAKPASRHLTGLNIVQDIPGYLYTGGVSCDGDIITVYPG
complement(4712117..4713025)       PHAGE_Salmon_SP_004_NC_021774: baseplate assembly protein; SN31241_46370; phage(gi526003629)     0.0                 SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MATVDLSLLPVPDVVEELDYETILAERIATLISLYPENQQEAVARTLALESEPIVKLLQENAYREVIWRQRVNEAARAVMLAYAIDSDLDNIGANFSVERLVVTPADDTTIPPTPAEMELDADYRLRIQQAFEGLSVAGSVGSYQYHGRSADGRVGDISVISPSPACVTISVLSRENNGVASEELLAIVRNALNAEDVRPVADRVTVQSAEIVNYQINATLYLYPGPESEPIRAAAEAKLKAYISAQHRLGRDIRKSAIYAALHVEGVQRVELAAPVTDIVLDNTQASFCTDYSLVIGGSDE
complement(4713032..4713379)       PHAGE_Salmon_SP_004_NC_021774: baseplate wedge subunit; SN31241_46380; phage(gi526003628)     1.97e-77            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MTARYLGMNRNTGLAISDSEHISQSMRDILLTPVGSRVMRREYGSLLSALIDMPQNPALRLQIMVACYSAIQKWEPRIRLTSISFERGDTGEMYVDITGMRTDTGASVSTTVSLS
complement(4713376..4714017)       PHAGE_Salmon_SP_004_NC_021774: phage baseplate assembly protein; SN31241_46390; phage(gi526003627)     8.78e-130           SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MNTLATLQDALRLLRNLIRTGVVVEVDLDDGRCRVQTGGIVTDWLQWLTTRAGRSRVWWAPSVGEQVLLLAVGGELDTAFVLPGIFSDDHPAPSASADAFHIAFPDGAVIEYEPETGALTVSGIKTADVTASDSITATVPLVTVKAETRITLDTPEVVCTNKLTTATLEVQKGGTMRGNIEHTGGTLKSNGVQVDDHGHGGVQRGGSWTEGTR
complement(4714094..4715470)       hypothetical protein; SN31241_46400                                                  N/A                 SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MYFIFYTSEGVMENKKYQVFVSSTYVDLIDARKKIIETVLSLYHFPVGMEMFSADDSEQWDIIKETIDASDYYVIIIGHKYGSVSKDGISYTEMEYNYAKSLNIPVLAFIRGRDVLTKPHERESDPQKEKQLNAFIEKAKANKMCDFWETIDELATKVAIALPKVMRRNPRTGWVRGDQVASKEITAELAELSNENRKLREKIREYESQLHSDAPQLELSMIDNDLTLTVDAESTYQEYLPQLCKEAVPLELKDTITTDEIESYNSSLPTDKEVDLYNKKMRLHCNYKNNAITVSPVLRNNGRTFASNVYVEIDFPEFLIVLKGSNEDFFIKEPKLKIPESPISKHKKRLSALMSLENFRMGIFDETSIAIAKPHFEVPAIINRIADLGTVNQDVWVMKEDHKITLRAKKVLQSLTVEYEEIVIIPLTIGTGVINFKIICEQLKEPVVFSRQVTVTAS
complement(4715475..4715942)       PHAGE_Salmon_SP_004_NC_021774: hypothetical protein; SN31241_46410; phage(gi526003626)     3.88e-60            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MNDFKPFDDKLAGLIAALSPAARRRMAADIAKTLRARQQRRIKTQKAPGGTPYAARKRQPVKAKKGRVKREMFAKLRTSRFMKASAGNDAAVVEFTGKVQRMANVHQYGLKDKPGRNSAPVQYDARTLIGFDHESKNMIHDIIMVSLAEAARSID
complement(4715935..4716402)       PHAGE_Salmon_SP_004_NC_021774: phage tail protein; SN31241_46420; phage(gi526003625)     1.28e-68            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MYKPKNLRKALTDAVPVLARNPDMMRVFIDNGNLASTLATSLSFENRYTLNVVVTDFTDDIELLLVPIQAWLRIHQADIMTTDEGRKKGFTYFADINDNDSVDISISLMLTERTIVKEQGDKLHVEQAEEPQPPEPVTRPVELYVNGELVSRLHE
complement(4716510..4716923)       PHAGE_Salmon_SP_004_NC_021774: LysB; SN31241_46430; phage(gi526003623)               3.26e-62            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MKTIVVLLVLAVAGLLWMRHENTSLTRSFERANKVAGEQKTLITMLKSQLKTASRIRGENETAQVLLRGELIDAGARAQRREQTITRLLNENEQLRRWYGADLPDAVRRLHQRAACADAGDCLQRMPEGQSLPDAGK
complement(4716920..4717402)       PHAGE_Salmon_Fels_2_NC_010463: endolysin; SN31241_46440; phage(gi169936041)          1.10e-66            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MAVVLALAALVPDFRLLHTSPEGLALIADLEGCRLRPYQCSAGVWTSGIGHTAGVVPKRDITEKEAAANLVADVLNVEKRLAVCVPVDMPPAVYDALVSFAFNVGTGAACRSTLVYHLKHRQWWQACDQLTRWVFVNGERNTGLENRRFRERTYCLKGAK
complement(4717413..4717622)       PHAGE_Erwini_ENT90_NC_019932: hypothetical protein; SN31241_46450; phage(gi431810988)     1.11e-06            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MDKITTFLTYWLSVVLAYFGTQTPERLALYVGGSCAIFTALVNFWYQRKKYRYLVSMGIDKGVIRGLIR
complement(4717625..4717828)       PHAGE_Entero_fiAA91_ss_NC_022750: tail protein; SN31241_46460; phage(gi557307592)     5.68e-31            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MNVIAHQGDTLDTLCQRHYGRTEGVVEAVLLANPGLAELGVVLPHGTAVSLPEVDAAPVSETVNLWD
complement(4717828..4718328)       PHAGE_Entero_fiAA91_ss_NC_022750: capsid completion protein; SN31241_46470; phage(gi557307591)     7.52e-80            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MTMIVMNNPAQQRDPMVIPPVPVDEPVIKNTAFFPDVDPKRMREEMRLEQTVTPVRLRRAIKTAMAETNAELTDWRDLQLAAGYQRLEDVPTDELDGESVRVFHYFNAVCSMTTATLYERYRGVDASAKGDKKADSIDDTIDEMWRDMRWSVARIQDKARCIVGQI
4718354..4718473                   hypothetical protein; SN31241_46480                                                  N/A                 SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MDAGRSYGESPTLTSVPPGAGRVLLTGDFLRASAPSFHR
complement(4718426..4719184)       PHAGE_Escher_pro147_NC_028896: terminase; SN31241_46490; phage(gi971753743)          4.64e-104           SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MATPAQRHAMRVSAIRASQRDNAPLRHASPYEQMLVKLAADRRTLSAIRSKERKADKKRELLPLYLPWVAGVLESGTGAQDDILMTVMLWRLDAGDITGAIEIARYALRFGLSMPENHSRTTPYMLAEEVALAATRARIAGEPVDAAQLLYVIGLTAEADMPDEVRARLHKVTGLTLRDAGQPENALSHLQRALQLDTHAGVRKDIETLTRELNPKPVAVKKLVPKAAKKAPAKKQDSPVKRGRGRPKKVAG
complement(4719188..4720348)       PHAGE_Salmon_SP_004_NC_021774: capsid protein; SN31241_46500; phage(gi526003617)     2.86e-169           SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MRKDTRFKFNQYLSRIAELNGIEVSDLNKKFTVEPSVTQTLFDKIQQSSSFLKLINMVTVGELTEEKVGIDVTGSIASTADTDGGVERKTADFAKMDAYRYFCHPVNFDYHLKYNKLDLWARFQDFQIRIRNAIIKRQALDYITIGFNGVSRAATSDRSKNPLLQDVAVGWLQKYRNDAPERVMSSITDAEGTVISNTIKVGKGGHYANLDALVMDAFESLVAEIHRENPEMVVICGRRILTDKYFPMINKFQANSEQLAGELIISQKTIGQLQAVRAPFFPANSVFITTLDNISIYLYEDGHRRHIVENPKLDQVENYEQVKVDFVIEDYEAGCLIENIEILEPEEPATSEPVSAEVFAAAMVKAMQSLTGSAPAETGTTDGKEA
complement(4720380..4721243)       PHAGE_Salmon_SP_004_NC_021774: capsid-scaffolding protein; SN31241_46510; phage(gi526003616)     1.13e-131           SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MAKKISKWFRIGVEGDTCDGRVISATDIQEMADGFDPRVYGCRINLEHIRSVIPDSPFCRYGDVTEVKAEVIDEDSALNGKLALFGKIAPLDNLLAMLAKGQKVYTSMEIRPNFANTGKCHLIGLAVTDDPASLGTEYLQFCSRAQQNPLAGKKDQPGDLFSVATLAELEFEDLPDNLLSKISDTVKGIFSRKQTDDDARFGDVHEAVTAIAERVQIGGESAEVRFRAIETELADVKKALAEQADATSQQFSTLTTTLENTESRSQARRKLSTGGDGDSAVSTLTDC
4721408..4723177                   PHAGE_Salmon_SP_004_NC_021774: terminase ATPase subunit; SN31241_46520; phage(gi526003615)     0.0                 SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MTTTNDTSLLSDPRRQAALLFWQGYSVPQIAEQLQVKRTTVQSWKQRDKWEETAPLNRVEFTLEARLIQLYAKPDLTAHDFKVADFLARQMERLARVNRYGQTGNEADLNPNVANRNKGEKKKPKKNFFSEEAIEKLEEIFLEQSFDYQLEWWRAGLAHRIRHILKSRQIGATFYFAREALLQALKTGHNQIFLSASKTQAYVFRKYIIAFARQAGVELTGDPIVLGNNGAELMFLGTNANTAQSHNGDLYVDEIFWIPNFQKLKRVAGGMSSQEHLRTTYFSTPSSLAHGAYPFWSGEQFNKGRSDTSERVDIDISHAALAKGVACPDGQWRQIVTIEDALAKGCTLFNIDTLKRENSVDEFRNLFMCEFVDDKASVFPFEELQRCMVDSLEKWEDYAPFADRPFGHRPVWIGYDPSLRGDSAGCVVIAPPVVAGGKFRILERHQWKGMDFAQQAESIRELTQKYTVEYIGIDATGLGQGVFQLVRSFYPAAREIRYTPEMKTAMVLKAKDTIRRGCLEYDVSATDITQSFMSIRKTMTSSGRSSTYEASRTEEASHADLAWATMHVLINEPLTAATGEQSSSIMEWN
4723177..4724214                   PHAGE_Salmon_SP_004_NC_021774: portal vertex protein; SN31241_46530; phage(gi526003614)     0.0                 SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MSKKRNKRQQPPRTQNHTAAPAQSMEAFTFGEPTPVLDRRDILDYVECINNGQWYEPPVSFSGLAKSMRAAVHHSSPIYVKRNILVSTYIPHPLLSRQDFTRFALDYLVFGNAFIEERRSLTGKPLKLETSPAKYTRRGIEEDVYWYIQSYTQPHQFAPGSVFHLLEPDINQELYGMPEYLSALNSAWLNESATLFRRKYYQNGAHAGYIMYVTDAAQSSTDVEALRKAMRDSKGLGNFKNLFFYAPNGKADGIKIVPLSEVATKDDFFNIKKVSAADLLDAHRIPFQLMGGKPDNVGSVGDVEKVAKVFVRNELTPLQARFMELNEWAGEEIIRFEKYSLGDDE
complement(4724269..4724406)       hypothetical protein; SN31241_46540                                                  N/A                 SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MAGIALRAEAGIYCIFPAPERIPVALLWSWVSNEAKRSGDGVSWR
4724434..4724571                   hypothetical protein; SN31241_46550                                                  N/A                 SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MQVHEHAGGAPALAANGQNGQARRMQNNAPVACTAKKREIRGKMA
complement(4724735..4724926)       PHAGE_Salmon_SP_004_NC_021774: hypothetical protein; SN31241_46560; phage(gi526003653)     1.87e-39            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MHNSLSSIDPFADWAKKLTVMALNNDLSSREVESYAAKMVEQASKDELTVVIKHLLNHIRMHK
4724925..4725356                   PHAGE_Salmon_SP_004_NC_021774: hypothetical protein; SN31241_46570; phage(gi526003652)     2.58e-102           SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MSKNLELFNQQTAEIFAVLWDNFPVPQVITYEKFNAALPDDYFDQLNSPEMKALNQLRSVVEGTFTFLNENGYIQYETDHQTHFRNARLTEKALAVLNKKPEALGGNETMGDKIISAVKDGTPGVIAGAVTNLLSLGVNLVTS
4725490..4726530                   PHAGE_Salmon_SP_004_NC_021774: hypothetical protein; SN31241_46580; phage(gi526003651)     0.0                 SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MKHKKVSFLKENGEFSLSLLSFGIVHVKKSKEHKRSVNYYWNTRTQEIIIGSGTLRNHNSIPSIAHLFNYKRSSADLSREEIQLGDSVCVLLNTTAALFLFGSIVGIDKSKKGTYFHILPHDKMFPFQLNRVIKVKHQKNNIYLLNDGANERHEYMATKNLAFAKYQYQVEFVEFIISYIKIAPLVISYASDKSKIINEKTLLQCHKVLFEHIYSWAGEYRTHPVVVGDKERPTMEHDEIRKALKASLRACTKRELEKIKSREQLVLKLATLHAELAWIHPFEDGNGRSIRLFLQIVAATMGYEFDMEKLDGSNKNKRAYHYAVRCAIHNNKRNLIALISRAIKEL
complement(4726903..4729026)       PHAGE_Salmon_SP_004_NC_021774: putative replication protein; SN31241_46590; phage(gi526003650)     0.0                 SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MQGVLSKIDRLPYFLSSLFTSRYEYIRRNKSPVHGLYFLKSTFLRRLWPRIERVNQHNEMNTEASLLFLAESENYARLPGMNDKELKKFASRIASQLFIMYEELSDAWAEAHGGKESLFTNEAQAHLYGHVAGAARAFNVAPLFWKKYCKGQITIRQAFSAVARLINDEWWTNQLKTQRMRWHEALLIAAGEVNKDRSPYASKNAIRDVHARRLANLEYLKSCELENKVTGERIDLISKVMGSISNPEIRRMELMNTIAGIERYAAAEGDVGMFITLTAPSKYHPTRQVGKGKDKTVQLNHGWNDEAYTPKDAQRYLCRIWSLMRTAFKDNDLQVYGMRVVEPHHDGTPHWHMMLFCKRQQRKEITEIMRRYALKEDGDERGAARNRFQAKHLNKGGAAGYIAKYIAKNIDGYALDGELDKDTGKPLKDTAAAVTAWASTWRIPQFKPIGLPTMGAYRELRKLPRGVSIADEFDERVEAARAAADGGDFDLYITAQGGANVPRDGQTVRVARSVSDEVNDYEEDIERVVGIYAPHLGARHVHITRSSEWRIVPKVLAVEPLTLKSGIAAPRSPVNNCGKLTGGDIPGMTNTPSEHTAAVLNLVDDGVIAWDDPEVVTVLRGALKHGAQQQNRRQRSGELLKPHDVAPSGRLTKSERAQIPRIRVELAQLGITLQRWELQALARGATVRFGDLSFSYPVIDEWGWAIV
complement(4729169..4729444)       PHAGE_Salmon_SP_004_NC_021774: hypothetical protein; SN31241_46600; phage(gi526003649)     1.04e-42            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MSIRIAIGERYVVTSDRFQFILQEKKTAETGRNAGKEWLDVVGYYPKLNQLVSGLIHHDILSGNAVSFEVLSAQVELLGQQCLRAFDANGR
4729470..4729607                   hypothetical protein; SN31241_46610                                                  N/A                 SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MIQALIDSKHSVSPTDMLHGGRQGLVRHILRKPMQQRRTASPERR
complement(4729670..4729789)       PHAGE_Escher_P2_NC_041848: hypothetical protein; SN31241_46620; phage(gi100007)      4.52e-14            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MRRAVFHKQITTVDELSKLTIELTGYCAGEFKKLNKERS
complement(4729797..4729967)       PHAGE_Entero_P2_NC_001895: hypothetical protein; SN31241_46630; phage(gi9630363)     1.88e-10            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MSLMQSVLLNNWLKIAIMKNGELSLADIKRDKETGIMTGSTIAIYSSELNHPDGCG
complement(4729967..4730191)       PHAGE_Salmon_SP_004_NC_021774: hypothetical protein; SN31241_46640; phage(gi526003646)     2.09e-33            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MHTVTGKHRGNFSLILQQARAEAQADAATRFSSHLDSLIRHIAGAELSRVEIVELLSQESIKFHNIGLSREETL
complement(4730255..4730731)       PHAGE_Escher_P2_NC_041848: DNA topoisomerase II large subunit; SN31241_46650; phage(gi100005)     7.43e-109           SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MEKQPAALRGLIGKYLAAPRWQDSCDFYNQMMERERLTVCFHAQLKQRHATMRFEEMNDVDRERLVCAIDELRAAFSRRRQVGASEYAYISFLTVSQRRTLFMHAGLTEKEFNQPYWRINEDSCYWRDALFRALRELFNLFEYAPTILTSVKPEQYLH
complement(4730746..4730868)       PHAGE_Entero_WPhi_NC_005056: gp78; SN31241_46660; phage(gi33438930)                  1.08e-12            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MDFTITHGRGRKGIIIRTKKPSAISAVFAFLKSRRFWKCL
complement(4730925..4731197)       PHAGE_Salmon_SP_004_NC_021774: Cox; SN31241_46670; phage(gi526003643)                8.24e-55            SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MEPNDYLLQYPLDAVHVEKFAELLGKPKTAVAEMVKANKLPVIELRDPCKPNARAGEKWVFIPEFNRAVREAFYNRPVEQRDAWLLWMGL
4731398..4731409                   attR                                                                                 N/A                 GTGAAATCAGCG
4731697..4732677                   PHAGE_Salmon_SP_004_NC_021774: integrase; SN31241_46680; phage(gi526003641)          0.0                 SalmonellaentericasubspentericaserovarNewportstrUSMARCS31241MAIKKLDDGRYEVDIRPRGRDGKRIRRKFERKAEAVAFERYTIANASQKEWAGQRADRRTLAELLDVWWKYHGQNHEHGTKEFNHLLKTISGIGDMPVSRVSKRALMDYRSTRLRDGISAATINRDMYRLSGMFTKLIQLDEFSGQHPIHGLPPLAEANPEMTFLEKSEIEKLLSVLVGDDLLVALLCLSTGGRWTEVATLKPAQITSCRVTFLKTKNGKKRTVPISAELEKKVKEEASAKLFKVDYEKFCGILRRVKPDIPPNQATHILRHTFASHFMMNGGNIIALQQILGHASIQQTMAYAHLAPDYLQNAVALNPLNGGVTL
