gi|545636471|ref|NC_022443.1|  Staphylococcus aureus subsp. aureus SA40, complete genome. 2728308, gc%: 32.86%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
844349..845374                     PHAGE_Plankt_PaV_LD_NC_016564: ABC transporter; SA40_0751; phage(gi371496158)        3.05e-34            StaphylococcusaureussubspaureusSA40MIELKEVVKEYRTKNKEVLAVDHVNLSIRAGSIYGVIGFSGAGKSTLIRMFNHLEAPTSGEVIIDGDHIGQLSKNGLRAKRQKVSMIFQHFNLLWSRTVLKNIMFPLEIAGVPRRRAKQKALELVELVGLKGREKAYPSELSGGQKQRVGIARALANDPTVLLCDEATSALDPQTTDEILDLLLKIREQQNLTIVLITHEMHVIRRICDEVAVMESGKVIEHGPVTQVFENPQHTVTKRFVKEDLNDDFETSLTELEPLEKDAYIVRLVFAGSTTTEPIVSSLSTAYDIKINILEANIKNTKNGTVGFLVLHIPYISSVDFGKFEKELIERQVKMEVLRHG
845367..846062                     PHAGE_Bacill_G_NC_023719: gp243; SA40_0752; phage(gi593777699)                       2.04e-05            StaphylococcusaureussubspaureusSA40MGKSFSEIINEMITMPNIQWPEVWTAIVETLYMTVVSTIFAFILGLILGVLLFLSAKGKSIGARLFYSIVSFIVNLFRAIPFIILILLLIPFTSLILGTISGPTGALPALIIGAAPFYARLVEIAFKEIDKGVIEAAWSMGANTWTVIRKVLLPEAMPALVSGITVTAIALVGSTAVAGVIGAGGLGNLAYLTGFTRNQNDVILVSTVFILIIVFIIQFIGDWLTNKLDKR
846080..846901                     putative lipoprotein; SA40_0753                                                      N/A                 StaphylococcusaureussubspaureusSA40MKKLFGLILVLTFAVVLAACGNGSKSGSDDKKITVGASPAPHAEILEKAKPLLEKKGYELDIKTINDYTTPNKLLDKGEIDANYFQHTPYLNTEKKDKGYKIVSAGDVHLEPMAVYSKKYKSLKELPKGATVYVSNNPAEQGRFLKFFVDAGLIKIKKGVKIEDAKFSDITENKKDIKFNNKQSAEFLPKIYQNEDADAVIINSNFAIEQKLNPKKDSIAVESAKDNPYANLIAVKEGHQDDKKIKALIEVLQSKDIQDFINEKYNGAVIPAK
846903..846914                     attL                                                                                 N/A                 ATCAATTAAATA
complement(847044..848264)         PHAGE_Staphy_PT1028_NC_007045: ORF002; SA40_0754; phage(gi66395166)                  1.85e-127           StaphylococcusaureussubspaureusSA40MWLEKFKNKNKETKYRYYEKYKDPLTAKWRRVSVVLNKNGKQSQKEAQRLLNERIEAKLNDKTPTTLKSLTFHVACDEWFQSYIKTSGSKRTTIKTKLSKLNTLKKFVDEDILINKITLSYAQQVFDEMDNKGYVYQVNKDALSIFKNVFEYTRRIYKLQDLEFLKDITLNKRIKSYDEVKAKRNKYLELNEIQSIIKDINTKAQKMHSGIHKRFYLFVALMTEFQALNGMRIGEMLAIQNEDIDFDNKSLNINGTIHWFHDESGGFGVKDTTKTESSYRTIGLSSRSCEILKKAILENKKDSKWNDGYLNRNFVFTNHKGNPMQTERFNKILREAAKDVGIDKEVSSHILRHSHISLLSQQGVSLKAIMDRVGHSDHRTTLSIYSHVTEQMDKDMMNKLEQVKLG
complement(848353..849081)         PHAGE_Staphy_phiN315_NC_004740: enterotoxin P; SA40_0755; phage(gi30043936)          5.35e-28            StaphylococcusaureussubspaureusSA40MKKLISILLINIIILGVSNSASAQGDIGIDNLRNFYTKKDFVDLKDVKDNDTPIANQLQFSNESYDLISESKDFNKFSNFKGKKLDVFGISYNGQCNTKYIYGGVTATNEYLDKSRNIPINIWINGNHKTISTNKVSTNKKFVAAQEIDVKLRKYLQEEYNIYGHNGTKKGEEYGHKSKFYSGFNIGKVTFHLNNNDTFSYDLFYTGDDGLPKSFLKIYEDNKTVESEKFHLDVDISYKETI
complement(849105..849833)         PHAGE_Staphy_phiSa119_NC_025460: enterotoxin type A precursor; SA40_0756; phage(gi725916012)     2.77e-33            StaphylococcusaureussubspaureusSA40MNKIFRILTVSLFFFTFLIKNNLAYADVGVINLRNFYANYEPEKLQGVSSGNFSTSHQLEYIDGKYTLYSQFHNEYEAKRLKDHKVDIFGISYSGLCNTKYMYGGITLANQNLDKPRNIPINLWVNGKQNTISTDKVSTQKKEVTAQEIDIKLRKYLQNEYNIYGFNKTKKGQEYGYQSKFNSGFNKGKITFHLNNEPSFTYDLFYTGTGQAESFLKIYDDNKTIDTENFHLDVEISYEKTE
complement(849903..850334)         PHAGE_Staphy_37_NC_007055: ORF039; SA40_0757; phage(gi66395766)                      8.10e-48            StaphylococcusaureussubspaureusSA40MRKLLGLALASTLILGACGSNDGDKKEESKSYTTNDIVKGFKDNKLNVINEKEMTREDFGLAPMKTDEAKMFVVQDDKNARVMKFKNSDDLKQTKKYYDELGKESAAFYSHTHSKGKFLIQMNGDIDDATFNKYKNSMDKTLK
complement(850351..850809)         PHAGE_Staphy_55_NC_007060: ORF028; SA40_0758; phage(gi66396141)                      1.52e-83            StaphylococcusaureussubspaureusSA40MYLYEKMVIENKEIPIDDGKSLGNFEGLYDNGVILINKNLSERRKAEVLYEELAHHKLTYGNILDQSKFNNRKFENYARRHGFISAVPLREIVEAYNYGVRNLYELSEYLQLSEEYILEAIEQYKKIYGIGTHYGEYSITFEPLRVFKYKEI
complement(850821..851153)         PHAGE_Lactoc_98201_NC_031064: DNA topoisomerase medium subunit; SA40_0759; phage(gi100004)     3.20e-28            StaphylococcusaureussubspaureusSA40MRTNDEIITIIKTSMKEQNMSLSELARRVGVAKSAVSRYLNLTREFPLNRAEDFAKVLGIKTEYLLGFAEREESTKQDTIAAHLDGDFTEEELIEIRKYAELVRKAHRNQ
851346..851609                     PHAGE_Lactob_A2_NC_004112: Cro protein; SA40_0760; phage(gi22296546)                 2.02e-35            StaphylococcusaureussubspaureusSA40MVLNLKRLRAERIACGITQDEMAHKMGWKTRTPYAKRENGIVDIGANEFIKMAKILGYETNNLDIFFTNNVPRKERKNILKGGELNV
851602..851874                     PHAGE_Staphy_PT1028_NC_007045: ORF019; SA40_0761; phage(gi66395183)                  1.74e-55            StaphylococcusaureussubspaureusSA40MSRTKLHDVPAKENTITEPKQVVVNPLFAKPNALASIFGISYSSVNRILKEWEKDSKGVDDLYYSLSSTMIVISIPRFEEYMKARHKKWM
851886..852032                     pathogenicity island protein; SA40_0762                                              N/A                 StaphylococcusaureussubspaureusSA40MKMYLAYICLVSLLTILLLAISNMYVAFSVYAWLITLGCNLTGGLENE
852025..852234                     PHAGE_Staphy_PT1028_NC_007045: ORF021; SA40_0763; phage(gi66395185)                  5.05e-40            StaphylococcusaureussubspaureusSA40MNNEQKEVIEHLVYQLELSVMNNLESYEHTEYVNGIEVVSEISREKHLELIMKWCAQELKNNFQLEKGE
852237..852557                     PHAGE_Staphy_PT1028_NC_007045: ORF016; SA40_0764; phage(gi66395180)                  1.99e-28            StaphylococcusaureussubspaureusSA40MNWEIKDLMCDIEVIKQKINDVATKHAWFVEDRFVKNELETKREHINFSASYLEHRIQNEHTVELLHVYLKEFSELIQKFHEIEKASSENFDEESDDAKNSIKVAE
852621..853490                     PHAGE_Staphy_PT1028_NC_007045: ORF003; SA40_0765; phage(gi66395167)                  4.13e-172           StaphylococcusaureussubspaureusSA40MNEIKLKYDTQVSVVHYESLDSRSFKSFSMPKWSKLVNKLSVPIEANYKYARGVAVYGDIKDNTNDHGEIIKKHRNDKNVIYRNVIVLDYDEINDVKQLHDAISSVLSSVAWYWHTSFSHTTEQARIRLYIPLNERISADDYRKYTKVLANKIGHKVDEGSYQPSRCFALPVIQKGHIFIKRVNDCPIMDVDMLEQWSKEYKQSNGSPNIKGYTRRDSAYWRDIAFGVSEGERNSTLASITGYLLRRYVDPNLVYGLVSAWASVCKPPINQSEVNNTFKSILKKDSKNS
853507..854976                     PHAGE_Staphy_phi2958PVL_NC_011344: virulence-associated protein E; SA40_0766; phage(gi209363581)     1.22e-90            StaphylococcusaureussubspaureusSA40MEDVTNEEVFEMIDSRTGVLNANDWKSQLRRSATTQALKKTTTNAEIILCNDESLKGLVQYDAFEKVTKLKRLPYWRSKGDTNYYWADIDTTHVISHIDKLYNVQFSRDLIDTVIEKEAYQNRFHPIKSMIESKSWDGIKRIETLFIDYLGAEDNHYNREVTKKWMMGAVARIYQPGIKYDSMIILYGGQGVGKSTAMSKLGGHWYNQSIKTFKGDEVYKKLQGSWICEIEELSAFQKSTIEDIKGFISAIVDIYRASYGKRTERHPRQCVFVGTTNNYEFLKDQTGNRRFFPITTDKNKATKSPFDDLTPDVVQQMFAEAKVYFDEDPTDKALLLDKEASEMALKVQEAHSEKDALVGEIEEFLERPIPSDYWYRTLEEKRVSAHDVIDQDYIKLYGDGKLIELPNTKPGAYVWRDKVCSMEIWKVMMKRDDQPQQHHLRKIDKALRNTSYCGQSKSRHRFGEGIGRQYGFGINLISYYQGLKSKEQK
855262..855624                     PHAGE_Staphy_PT1028_NC_007045: ORF013; SA40_0767; phage(gi66395177)                  8.27e-14            StaphylococcusaureussubspaureusSA40MNKNQLKSEILEYIKAHAGTSFVEIERVFEENNFDYKGDGAYTSGQHPNVVFWIGWNQEAFDVIAELKKDRRIEMDICEPIVYMVDGKGLDLPIVRSKNIKTDHWLPVTFTISKKETECV
855626..855910                     PHAGE_Staphy_StB27_NC_019914: hypothetical protein; SA40_0768; phage(gi431809698)     1.40e-11            StaphylococcusaureussubspaureusSA40MNDKEKIYNQLHHDAPIQIMPAPENLFVEYIEDGEVWYSPVVCIALSKAHNINFYDSDDVGCIDKAATCSIKKFNPETGEFEQFSKMAQKEITQ
855907..856548                     PHAGE_Staphy_PT1028_NC_007045: ORF008; SA40_0769; phage(gi66395172)                  9.97e-144           StaphylococcusaureussubspaureusSA40MNIETIVNEFETRAGTLLRYYTGLLERSKVQPCCFKLYNDPFDMVYVMMNSKLFSHVYIKDCKVRQSFELASPKHTEGLIRSIEGHYVGYELHDGKQLSISDMMASQLFEDEYFMYGLQTYAESNNSDVFKCLENGFDTDTLEGIQSSNTDVIANIEMLYQLATGINEPVPELVEGLKLVTEFVQDENATQEDYKALERKLNDLKTSYYSLSK
857065..857406                     PHAGE_Staphy_PT1028_NC_007045: ORF015; SA40_0770; phage(gi66395179)                  2.15e-78            StaphylococcusaureussubspaureusSA40MQSIAEKETYHLPTEHLQVFNVIKNTSNKYITKTKILNQLGYEYNSSNERWLRRVINSLVYDYGYPIGCSYKPSERGYYIITTEQEKQQAMRSIKKLADGSMKRYEALKRIKV
857418..857996                     hypothetical protein; SA40_0771                                                      N/A                 StaphylococcusaureussubspaureusSA40MKTESYFKEYNQFVIDQQKAIQELKQERNALESKIKIDKSTYKQLIMDGQDDKADNLYQATDADEKKLKALNKRLETKKSVSKEVKYQKTIELLKHQSELSSLYESEKQSALGKLKKVVDAYNEIIDEIEDINDRYEDEHQQYASIYSQEQLYDDKEAREALNGYFRENIFTSYINGNDLPYEHNNKLFLKR
858014..858232                     hypothetical protein; SA40_0772                                                      N/A                 StaphylococcusaureussubspaureusSA40METKYELNNTKKVANAFGLNEEDTNLLINAVDLDIKNNMQEISSELQQSEQSKQKQLGTTLQNLAKQNRIIK
858283..858810                     PHAGE_Staphy_PT1028_NC_007045: ORF010; SA40_0773; phage(gi66395174)                  5.28e-120           StaphylococcusaureussubspaureusSA40MKLLKTKNCLYYRNGDNKLSEYQLLTQFNPAFINKKIKMCEFQIESMYHMSASTTTCDEIMGVVSVSYPIEKLVIKIIETKAGLQNYKNRSINNMALLKKVLNHYTEKEQKQVVKYMRSNGRYKPYNVIERLQVDLYQASIKQRSERQKQRNTAIENSKIARVNAYHQSSYVKVV
858813..859154                     PHAGE_Staphy_PT1028_NC_007045: ORF014; SA40_0774; phage(gi66395178)                  7.43e-73            StaphylococcusaureussubspaureusSA40MDKKQIKDFVCDYHKRTRSDVLIDDEINTDEFFSIGDENSNEWMADDNIDDHIVKNHLEMIVDRVANDKEFYIFDSLIQGRSFKDISNVLECSEQSVRLWYETLLDKIVEVIE
859151..859720                     PHAGE_Staphy_PT1028_NC_007045: ORF009; SA40_0775; phage(gi66395173)                  8.40e-135           StaphylococcusaureussubspaureusSA40MSELTAKQARFVNEYIRTLNVTQSAIKAGYSANSAHVTGCRLLKKPHIKQYIQEQKDKIIDENVLTAKELLHVLTNAAVGDETETKEVVVKRGEYKENPKSGKVQLVYNEHVELIEVPIKPSDRLKARDMLGKYHKLFTDKHDINGNVPIFINIGEWDGDDEELDKAVKDVSNANPNHTVIVDDIPLED
860028..860828                     PHAGE_Strept_315.2_NC_004585: streptococcal superantigen SSA; SA40_0776; phage(gi28876204)     8.11e-96            StaphylococcusaureussubspaureusSA40MYKRLFISHVILIFALILVISTPNVLAESQPDPKPDELHKSSKFTGLMENMKVLYDDNHVSAINVKSIDQFLYFDLIYSIKDTKLGNYDNVRVEFKNKDLADKYKDKYVDVFGANYYYQCYFSKKTNDINSHQTDKRKTCMYGGVTEHNGNQLDKYRSITVRVFEDGKNLLSFDVQTNKKKVTAQELDYLTRHYLVKNKKLYEFNNSPYETGYIKFIENENSFWYDMMPAPGDKFDQSKYLMMYNDNKMVDSKDVKIEVYLTTKKK
complement(860906..861463)         PHAGE_Staphy_71_NC_007059: ORF024; SA40_0777; phage(gi66396064)                      5.56e-85            StaphylococcusaureussubspaureusSA40MNKKLLTRTLIASALVLTTVGSGFHSSSNYNGINNVAKASEITDRDLWKNVRDALKEANIIDKTANETVGVTYNLNNGGESSITGTADLDELSNFNNKPINTDSVKRIDLSRINPNGNRFDANDAWKKLTDKLKEKQIVKNGDTVTIHSKDKNDPPISAKVGENYNGNKGLMLNQRDITKITITK
861530..861541                     attR                                                                                 N/A                 ATCAATTAAATA
862172..862357                     PHAGE_Staphy_SA13_NC_021863: hypothetical protein; SA40_0778; phage(gi526244934)     4.35e-37            StaphylococcusaureussubspaureusSA40MSDYKLKIIELIKSDITGYQIHKQTGVAQYVISQLRQGKREVDNLTLNTTEKLYSYARQVL

#### region 2 ####
1298492..1298689                   PHAGE_Staphy_vB_SauS_phi2_NC_028862: DNA-binding protein; SA40_1182; phage(gi971750158)     2.26e-09            StaphylococcusaureussubspaureusSA40MNCYDEIYNTIKKLIENKEITSYQINKDTGISYGNINAMRRGERRIENLSLKNAKILYEYAKKVL
1299391..1299603                   PHAGE_Staphy_SA13_NC_021863: hypothetical protein; SA40_1183; phage(gi526244934)     3.61e-09            StaphylococcusaureussubspaureusSA40MNQFKEIYNTIEKLLNDKSISNYRINQDTGVSYGGISESRSGKRKVNNLTLETAEKLYNYQKQLEIMIED
1299899..1300105                   PHAGE_Staphy_96_NC_007057: ORF059; SA40_1184; phage(gi66395937)                      9.69e-20            StaphylococcusaureussubspaureusSA40MNEIETIISEIEKLLTNNTPYSISKNSGVPRQTVTDLKVGNTKIKDAKFKTIIKLYEYQKSSENNSEC
1301340..1301525                   PHAGE_Staphy_SA13_NC_021863: hypothetical protein; SA40_1185; phage(gi526244934)     1.96e-28            StaphylococcusaureussubspaureusSA40MSEYKKKIIELIESNLTGYEISKKTGVSQYVLSQLRQGKREVDNLTLNTTEKLYEYANKVL
1302096..1302251                   hypothetical protein; SA40_1186                                                      N/A                 StaphylococcusaureussubspaureusSA40MATFKRRKNNKKQDLILLRHEALEHYLMNKYNYNYDYAHKIVSKNTIIQFL
1302268..1302519                   hypothetical protein; SA40_1187                                                      N/A                 StaphylococcusaureussubspaureusSA40MLTLIKLKEDEQVIIYEYIPEDDISNGKGSVTFNKKDAEVIDFSLSEIENEEYFMLYRNKSFSVVRDFIEKQEFPENYKIAWY
1302724..1302996                   PHAGE_Staphy_StB27_NC_019914: minor head protein; SA40_1188; phage(gi431809708)      2.23e-13            StaphylococcusaureussubspaureusSA40MIPGVNAPPMHPWCRSTAVPYVGKWRDKFFKEREGKYQVEVKEAKLQEKAKNQMKEMIESGKIKIEINPEKQNRHSLGHRLYEEYKKRIC
1302990..1303247                   PHAGE_Thermu_OH2_NC_021784: SPP1 family phage head morphogenesis protein; SA40_1189; phage(gi526118333)     2.49e-11            StaphylococcusaureussubspaureusSA40MLKGKQTPSYTLLKNDELNKMLNQKFGTGRLIIENERKWKNKEIINFGQIIGKYYIDGKFIETKWGTVHYSKTGSHIIPNGKEGK
1303247..1303441                   hypothetical protein; SA40_1190                                                      N/A                 StaphylococcusaureussubspaureusSA40MKLWTYIGKKVMIELTNGQKFIGEVTNYDDEIDNESGEDSIHLDDGIDLYDFDESQIKYIEVLK
1303597..1303875                   PHAGE_Staphy_StB27_NC_019914: scaffold protein; SA40_1191; phage(gi431809709)        1.37e-10            StaphylococcusaureussubspaureusSA40MERNESNITDVTQNEEQLDNSDEQSQQNEKTFSQEEVSQLIKERIARERKKSDERIKDAKENNDSNEVAYLLKGGKVTKVYGDQGSVSYMLR
1304203..1304325                   hypothetical protein; SA40_1192                                                      N/A                 StaphylococcusaureussubspaureusSA40MSIQHLDGYISIEDFFKHMEELSKKEELEKEINQSKSKYQ
1304528..1305043                   PHAGE_Staphy_StB27_NC_019914: minor head protein; SA40_1193; phage(gi431809708)      9.81e-15            StaphylococcusaureussubspaureusSA40MIPGVNAPPMHPWCRSTTVPYVGNWRDKFFKEREGKYQVEEKEAKLQEKAKNQMKEMIESGKIKIEINCEKQNRHMLGHHLYNENKKRAILNNKKLPSYTILSIDLLNELLREKMSTGNLILSDELFDMKEIINFNQIIGKVHIDNVYIETRKGKVHYSKTGAHIVPYIDK
1305054..1305248                   hypothetical protein; SA40_1194                                                      N/A                 StaphylococcusaureussubspaureusSA40MRIEDAYRKDVIITLLNNEEYEGFVTDYENEFESETGNLVVDIQTDFAVYSFDETEIKSIRLLK
1305462..1305995                   PHAGE_Staphy_StB27_NC_019914: minor head protein; SA40_1195; phage(gi431809708)      8.48e-14            StaphylococcusaureussubspaureusSA40MIPGVNAPPMHPWCRSTTVSHVGNWRDKFFKEREGKYQVEGSFIESGALNNKSDEYGIKRNRHAQIYYNSVRNRDKQIEISKIAKNTNINKNTIQRVYEHIFENKYLLESGFKQFDPDFYMAQSWQRLREGKNIKKMDIIMLKHEALEHYLMNKYNLNYIEAHKLTEIKYNYSILIN
1306008..1306163                   hypothetical protein; SA40_1196                                                      N/A                 StaphylococcusaureussubspaureusSA40MLILKIKEINDKSVTYKYFPNNDENIKPGIIQMDIDSLEVINAEKSSLEKI
1306405..1306647                   PHAGE_Staphy_StB27_NC_019914: scaffold protein; SA40_1197; phage(gi431809709)        2.86e-10            StaphylococcusaureussubspaureusSA40MEKNESNITGVTQNKEQLDNSDEQSQQNEKTFSQEEVSQLIKERIARERKKSDERIKDAKENNDSNEVAYLLKGGKVTKV
