gi|549722728|ref|NC_022544.1|  Salmonella enterica subsp. enterica serovar Typhimurium str. DT2, 4814801, gc%: 52.20%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

#### region 1 ####
976829..978775                     PHAGE_Plankt_PaV_LD_NC_016564: ABC transporter; STMDT2_08801; phage(gi371496158)     2.75e-46            SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MTALLELCNVSRSYPSGEEQVAVLKDISLQIHAGEMVAIVGVSGSGKSTLMNILGCLDKPTSGTYRVAGRDVSTLDPDALAQLRREHFGFIFQRYHLLSHLTAAQNVEIPAVYAGIERKKRQARARELLLRLGLSDRVDYPPSQLSGGQQQRVSIARALMNGGQVILADEPTGALDSHSGEEVMAILRQLRDRGHTVIIVTHDPLIAAQAERIIEIHDGKIVHNPPAQEKKREQGVDAAVVNTAPGWRQFASSFREALSMAWLAMAANKMRTLLTMLGIIIGIASVVSIVVVGDAAKQMVLADIRAMGTNTIDIHPGKDFGDDNPQYRQALKYDDLVAIQKQPWVNSATPSVSKSLRLRYGNIDIAVNANGVSGDYFNVYGMSFREGNTFNAVQQQDRAQVVVLDANTRRQLFPNKANVVGEVVLAGNMPVIVIGVAEEKPSMYGNSNLLQVWLPYSTMSDRIMGQSWLNSITVRVKDGVDSDQAEQQLTRLLTLRHGKKDFFTWNMDSVLKTAEKTTYTLQLFLTLVAVISLVVGGIGVMNIMLVSVTERTREIGIRMAVGARASDVLQQFLIEAVLVCLVGGALGISLSMFIAFMLQLFLPGWEIGFSLTALASAFLCSTFTGILFGWLPARNAARLDPVDALARE
complement(978905..979126)         PHAGE_Lactoc_bIL312_NC_002671: Csp; STMDT2_08811; phage(gi13095918)                  1.92e-18            SalmonellaentericasubspentericaserovarTyphimuriumstrDT2METGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVRFDVHQGPKGNHASVIVPIEAEAVA
979450..979770                     PHAGE_Pectob_CBB_NC_041878: putative major capsid protein; STMDT2_08821; phage(gi100319)     4.84e-08            SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MGKTNDWLDFDQLVEDSVRDALKPPSMYKVILVNDDYTPMEFVIDVLQKFFSYDVERATQLMLAVHYQGKAICGVFTAEVAETKVAMVNKYARENEHPLLCTLEKA
979801..982077                     PHAGE_Agroba_Atu_ph07_NC_042013: putative virion structural protein; STMDT2_08831; phage(gi100292)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRSEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDIVNFISHGTRKDEPSQSSDLGNQPTGDEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGRIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSVEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDNAIEALTEAIKMSRAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNLLLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMGEIKKVFTPEFRNRLDNIIWFDHLSGEVIHQVVDKFIVELQAQLDQKGVSLEVSQEARDWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNALTYDFQSAQKHKPEAAH
982269..982727                     PHAGE_Hypert_2_NC_014321: IS element Dka2 orfA; STMDT2_08841; phage(gi300116744)     1.47e-17            SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MGDEKSLAHTRWNCKYHIVFAPKYRRQAFYGEKRRAVGSILRKLCEWKNVRILEAECCADHIHMLLEIPPKMSVSSFMGYRKGKSSLMLYEQFGDLKFKYRNREFWCRGYYVDTVGKNTAKIQDYIKHQLEEDKMGEQLSIPYPGSPFTGRK
complement(983190..983873)         PROPHAGE_Escher_CFT073: transposase insF; STMDT2_08851; phage(gi26249410)            2.94e-37            SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MQADKTLNIGRDRLFNLLGEYRLLVPVKRAYHKTTNSHHRFYRHPNLLKPGPEQVTALEPEQVWVADITYLPLRSGTACLSLVTDACSRKIVGYHVGENLQTENVVKAFRQALRRRKTTGPLVHHSDRGLQYCSVLYQSVHERNGITCSMTDGYDCYQNALAERINGILKNEFLLSRPADLEQAREIVKESVAIYNHERPHLALKYKTPDDVHQAFYRQKTVNLYQD

#### region 2 ####
1055305..1055319                   attL                                                                                 N/A                 TTATAAAAATGTAGC
complement(1055354..1056646)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage integrase; STMDT2_09411; phage(gi169257268)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MANASYPTGVENHGGSLRIWFLYKGKRVRENLGIPDTAKNRKIAGELRSSVCFAIRMGNFNYVEKFPNSPNLARFGQDRKEITVLELTERWSELKRMEISSNTMSRYESIIKNMLPLIGENKMVSAVTTEDLLYVRKELLTGFQVMKKDHRTQVKGRKSSTVNNYMMLMAEIFQFGTDNGYAKENPFSGINRLKKAKGEPDPLTTDEFIRFIQACGHQQMRNLWSLAVYTGMRHGELCGLAWEDIDLHAGTIIVKRNLTQTDEFTLPKTDAGTDRVIYLIQPAIDALRNQAQLTRLGRQFEVEVKLREYGQSVIQPCTFVFSPQCVKRGPRTGYHYAVNSINKIWAPIIKRAGIRYRNAYQSRHTYACWSLSAGANPNFIATQMGHTDAQMVYKVYGKWMSEKSAEQVSLLNQALFRYAPSLPQSMVAAQ
complement(1056691..1056939)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage excisionase; STMDT2_09421; phage(gi169257269)     1.63e-55            SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MSNIIQLTPNKWVSEKVLIAVTGLKPGTITRARKESWMLGREYLHISPDGNPKPSSECIYNREAVDQWIEAQKKNQPGAKTT
complement(1056980..1057219)       PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; STMDT2_09431; phage(gi169257270)     1.38e-52            SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MRLINRSKQSPLGRRACDVALAAHHEKFGDYGRQKHVTNYTVVVDGVKVPVEVVNRATSYVATAMIGVRKLRNLPAQAN
complement(1058382..1061267)       PHAGE_Phage_Gifsy_2_NC_010393: putatitive bacteriophage exodeoxyribonuclease VIII; STMDT2_09441; phage(gi169257272)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MSGTNPVFLVRKAKKSSGQKDAVLWCSDDFEAANATLDYLLIKSGAKLKDYFKAVATNFPVVNELPPEGELSLTFCDYYQLAKDNMTWTQIPGVTLPSSEAAAAARQHIVDGVDTETGEVLEDHTENFGNESNSPAQATAPAPELTVVATMPLRHRVLAQYIGEGEYLYHVDASQKKEILRLEMDTDNSYVQNLLLAAENVEAFKKAIEHDIHKIVNAVKKIFPVDGKTPELATVIQFLKTWFETEHIDRGLLVKEWAKGNRVSAIQRTESGANAGGGNKTDRNPDYEHTLDTLDVEIAMATLPMDFNIYELPGSVYRRAKEIVKKKESPFKEWSAALRATPGILDYSRAAIFALIRSAHPEFYHYPGRLQGYINANLTETDHENPTEEALTAARHTPEKDAVEEANRQLAAARGEYVEGISDPNDPKWVKTGTSQPTTEPELVKNVGNGIFDVSALMQNSSTHGTETNPETTSNVQVQKADSDEKQAGDAVQAGEDDLGTGKEAVTVENQNQAEAQQNVPESQQEEPEAAWPEYFEPGRYEGVPNEVYHAANGISSTQVKDARVSLMYFNARHVEKTIVKERSPVLDMGNLVHALALQPENLEAEFSVEPEIPEGAFTTTATLREFIDAHNASLPALLSADDIKALLEEYNATLPSQMPLGASVDETYASYEQLPEEFLRIENGTKHTATAMKACIKEYNVTLPAPVKTSGSRDALLEQLAIINPDLVAQEAQKSSPLKVSGTKADLIQAVKSVNPAVVFADELLDAWRENTEGKVLVTRQQLSTALNIQKALLEHPTAGKLLTHPSRAVEVSYFGIDEETGLEVRVRPDLELDMGGLRIGADLKTISMWNIKQEGLRAKLHREIIDRDYHLSAAMYCETAALDQFFWIFVNKDENYHWVAIIEASTELLELGMLEYRKTMREIANGFDTGEWSAPITEDYTDELNDFDVRRLEALRVQA
complement(1061394..1061693)       PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; STMDT2_09451; phage(gi169257273)     6.77e-52            SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MKNSPLIWRGFIHPEFKTGEIMEIVKIEMNLKAVNKSIALFNCENLDGGYVLGKFDSPHCAVKAISLLTVKVSDGEQAGFGNYRSYKLDYSEKFYQTIH
complement(1061715..1061873)       PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; STMDT2_09461; phage(gi169257274)     1.88e-31            SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MLKQCGYCRKSIDEGKEVKNTLLYRNGSQLASKEKEYCSRQCAEYDQMAHES
complement(1061866..1062126)       PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; STMDT2_09471; phage(gi169257275)     5.96e-20            SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MLQNRTFSCTFCFTNRTFGFIVSFIDNKRIVVRCKTFRWPAIRQTRVRMIDFARRPARQQAVPLNRIEVLIRRLCYLLAQKGDPDA
complement(1062176..1062517)       PHAGE_Phage_Gifsy_2_NC_010393: putative bacteriophage regulatory protein; repressor; Lambda gpCI analog; STMDT2_09481; phage(gi169257276)     2.48e-77            SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MADLSRRVMLSHTSVRKWASGTSVASGERLKRLSAVTGRPEYWFFMEPGDESEGERAEPKPRVLDEKEETLLSLFNQLPEAEKLRVILHTKAVLQEMDLLKNNVFDLINDLKK
1062911..1063285                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage transcriptional activator; Lambda gpCII analog; STMDT2_09491; phage(gi169257278)     4.50e-72            SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MAYQAKRHQPNNHRGYLPMENAIARKLDPPEINPIEIESVLLNRLASVGQKSYAEHMGISESTVSRRKAEGYFCNMAKELAFLGIQAAPPEAVLVSRNYLTAVEILADAGLKAERARPDALGWD
1063370..1064353                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage DNA replication protein; Lambda gpo homolog; STMDT2_09501; phage(gi169257279)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MSMSNTAEIYKFPAPIPTQQECRMADLENGYLRLANQIQDALCIVELSGREFRVLNAIIRLTYGWSKKSDRIANSLIADKTTLKVKHVSEAVLSLAYRNIIILRRIGQTRYIGINTNLDKWAYSKPHCSKCPVSFPDDEIATWIISVPETRDSYPRKGGRASPKTGIVIPENRDSVLPHSAIPENGDSYPRKEGRASPKTGNTKDIIPKTNIKDLTPFNPPKGKVKFDPLSIPVPEWLNAASWNEWVTYRQQSGKPIKTELTVTKAFRLLKECLDEGHDPVNVINTSIANGYQGLFKPKFALNDRRAGRDVNHISAPDKTIPTGFRG
1064356..1065105                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage DNA replication protein; STMDT2_09511; phage(gi169257280)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MKNVIGTGSALDRLKRIIPASVQPKFSTADEWRAWQEAEGRKRSEELDRMNQKSRTEKIFGRSGIQDLHRSCTFANYEVSGEGQRKAYTMAKSYAQNFGSGFASFVFSGGPGTGKNHLAAAIGNHLLAGGHSVLVVTIPDLMLRVRECYDGGQSEASLLDDLCKVDLLVLDEVGIQRGSSGEKVILNQVIDRRLSSMRPVGVLTNLNHEGLLDSLGARVIDRLQMDGGMWVNFDWESYRKNVSHLRIVK
1065116..1065463                   PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; STMDT2_09521; phage(gi169257281)     7.30e-80            SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MARPKTQSERMIILERIIGLVKEQGRITTNDVVAIFGVHRTTAEKYLRIALERGGFIRHGRCGIFRDQRAVIDYDLRRYSSSQVTGFSALPVLEKSPVMQVYGASKMSINKGGAQ
1065460..1065771                   PHAGE_Phage_Gifsy_2_NC_010393: conserved hypothetical bacteriophage protein; STMDT2_09531; phage(gi169257282)     5.67e-70            SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MSNIDKRALREVAERATPGNWRRTSSLFNGITVTPFSLCGEEVTLAHTVEKRDAEFIAAANPATVLALLDVLYEFGEDEVAISEYVTNLEDALRVAAAPQQEE
1065849..1066139                   PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; STMDT2_09541; phage(gi169257283)     2.57e-59            SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MNYEDKLMYQRMIFEEGKEPRLYSSQHDSKFIPISNNNGKVQKVPVMEFKDTRGDVFYAYNYAYSGKKPSNDEIYKAIDELKPIGEKFEMSKTISD
1067080..1067682                   PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; STMDT2_09561; phage(gi169257286)     2.56e-147           SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MAHELQLIKQSSGILIPATPETSEILQSKIKLGAVLVAEFRQVRNPAFHRRFFALLNLGFEYWEPTGGTISANERKLVNGYAKFLAAYGGNESALLDAAEQYLEQIANRRVTNGISLCKSFDAYRAWVTVEAGHYDAIQLPDGTLRKHPRSIAFSSMDEVEFQQLYKSALDVLWRWILSRTFRTQREAENAAAQLMSFAG
1067891..1068502                   PHAGE_Phage_Gifsy_2_NC_010393: NinG; STMDT2_09571; phage(gi169257288)                1.46e-147           SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MAKLPRRKCANKECRQWFHPIREGQIVCSYQCASAVGKEQTRKAREAAQRKAQSLQRAAEKKERAAWRQRKAAVKPLKHWIDLTQRAVNDICRETELAEGLGCISCGTKTAFAWHAGHYRSTAAAGHLRFTRFNIHLQCDVYNVYKSGNIEAYRAALVERYGEAAVLALENNNTPHRWTVEELKEIRLAALADLRALKKLEAA
1068499..1068645                   PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; STMDT2_09581; phage(gi169257289)     1.27e-26            SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MKPELIEILRMRWLRLRIYRYRGSFPVAYRILRNYVRIEAKREHRNES
1068635..1069432                   PHAGE_Phage_Gifsy_2_NC_010393: prophage antitermination protein; late gene regulator; Lamba gpQ homolog; STMDT2_09591; phage(gi169257290)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MNLESLPKYFSPKSMMPGAVPCGITSDTLTITDVMASLGLLTAKAAVGIELYLAKAGVLSSENIIAYIRQLAEQRAERHGALRKMEKGKRSKFLDTMARYVFRDYSLSAASLVTCSSCHGAKLIDAEVFTNKVTYPDGKPPKWVKDTKGISPSDWEVWKSVREQVRVVCKACDGKGHVKNECRCRGRGEILDKKKSELQGVPVYKKCPRCKGRGYPRLKDTEIFKALGVTEMVWRYNYKLFFDRLVEHCHIEESYAEKVLGNVTR
1069499..1069816                   PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; STMDT2_09601; phage(gi169257291)     9.70e-76            SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MPVTLQELRTSPRRGFCFFWWYIPLVSNHRGGDMGFYYVFQYKPKGMSSGKHLNVSEEFSDRNEAKRAKSRHMINDPDCVFSGIVQADSPAAVLQEVQAESLNRL
1069990..1070115                   PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; STMDT2_09611; phage(gi169257292)     8.90e-23            SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MKMHNDPHSMDSQSIFAGSQLLPMEKTSHLALSVGFRSHLA
complement(1070251..1070700)       PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; STMDT2_09621; phage(gi169257293)     2.59e-107           SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MKNTALGKFIFIVGTALLLGGCSGMVMPPYATHGTSVGIIAPAGGYSEWHTDSRNHTTGDSHSQSQGNCTQSEDSQLNENGLTRTHQSNCNTRSQTHSSSTSKTRSSSVGFSVGGPVGASIGLIKQMESMNRAPANDMSSNEMFKNFGF
complement(1071061..1071747)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage virulence determinant; GtgA; STMDT2_09631; phage(gi169257294)     4.22e-170           SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MPTGIKPIFINNMMSTYGLSHPHDSKVFPDLPEHQDNPSQLRLQHDGLATDDKARLEPMCLAEYLISGPGGMDPDIEIDDDTYDECREVLSRILEDAYTQSGTFRRLMNYAYDQELHDVEQRWLLGAGENFGTTVTDEDLESSEGRKVIALNLDDTDDDSIPEYYESNDGPQQFDTTRSFIHEVVHALTHLQDKEDSNPRGPVVEYTNIILKEMGHTSPPRIAYEFSN
1072336..1072788                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage lysis protein; endolysin; lysozyme; STMDT2_09641; phage(gi169257296)     3.75e-107           SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MMRISEKGITLIKEFEGCSLTAYPDPGTGGDPWTIGYGWTHSVDGKPVKPGMMIDEATAERLLNTGLVGYENDVSRLVKVKLTQGQFDALVSFAYNLGARTLSSSTLLRKLNAGDYAGAADEFLRWNKAGGKVLNGLTRRREAERALFLS
1072785..1073285                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage lysis protein; Lambda gpRz homolog; STMDT2_09651; phage(gi169257297)     9.14e-115           SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MMFNWKTMFVGLLLVSLIVAGRLANHYRNNAITYKEQRDTVTHRLTLANATITDMTKRQRDVAALDEKYTKELADAKAENDALRDDVAAGRRRLYVNATCPAVPTGKSTSTARMDNAASPRLADSAQRDYFALKERVKTMQKQLEGAQAYIRTQCHGNAGKTSNQW
1073493..1074026                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage DNA packaging protein; terminase, small subunit; STMDT2_09661; phage(gi169257298)     1.44e-127           SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MDQEIKSLELNITQLSAITGAHRQTIASRLKGVKTSGGNGSNLKIYRLVDILTAMMTMPAVTGENDPNKMKPSDRRAWFQSEMTRIELEKEMRTLIPASEVLSVYAVMAKTVVKTLEILPDLLERDAALPPDALEMTQKIIDQLREDLASMTYQACADAINGDDDDNGDEGQEEEQE
1074067..1076121                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage DNA packaging protein; terminase, large subunit; STMDT2_09671; phage(gi169257299)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MFRPPRRMKISDAVRKYMRVPRDAGNSVAWESTLTPYVVEAMNCLSSRSYDAVVFVAPARTGKTLGLIDGWISYNIVCDPSDMLVVQMTQDKAQEHSKRRLAKMFRHSPAIARRLSPHRNDNNVHDKTFRDGSFLKIGWPSINVFSSSDFKCVALTDYDRFPEDVDGEGDAFSLASKRTTTFMSLGMTLVESSPGREITDTRWKPSSPHEAPPTTGILSLYNRGDRRRWYWPCPHCGEYFQPSMANMTGYRHIADPMEASEAARIQCPHCHKLTEPQQKRELNNRGVWLREGQHIDRDGNITGEARRSRIASFWMEGPAAAYQTWAQLVYKLLTAEEEYERTGSEETLKAVINTDWGLPYQSRRSLEARSGDALMARAEDVSKRTVSDGVRFIVATVDVQGGKKRRFVVQVVGYGAYGERWIIDRYNIRYSLRVNEDGESQPVNPAARPEDWDLLKTDVLEKTYPLAADPEQFMPVLAMAVDSGGEDGVTDNAYAFWRRCKRKGVAGRVYLFKGDSTRREKLITKTYPDNTERSERRAKARGDVPLYLLQTNALKDRVAAALEREEPGANYIHFPDWLGPWFYEELTYEERSADGKWKKPGRGNNEALDLMCYAHALAILRGYERINWEKPPGWARLPEKDAAKTTQPVEVRQQEQHEGGEKAVKARKKKILPAWGGGSGGGWL
1076321..1077868                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage portal protein; STMDT2_09681; phage(gi169257301)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MNFIDKAISMMSPGWAVSRLRSRAVIKAYEAAIPTRTHKIKRENRNANQLNQIAGKSLREQARWFDNNHDLVVGALDKMEERVIGAKGIIVEPQPLTVAGTLNNALAEQIRARWAEWSVSPDVTGQYTRPVLERLLLRTWLRDGEVFSQMVAGKMPGLEPVAGVPFWLEAMEPDYVPMEQTDSTNNLIQGIYFNDWQRPKSYIVCKSWPGFATAMVATKLIDAENMLHLKFTRRLNQARGVTLLAPVIIRLLDLKEYEDSERLAARISAAFAMFIRRSDAMVQDGDAPDYADKDRDLDIEPGTILKDLLPGEDIGTIKSDRPNANLESFRMGQLRAVAAGVRGSFSSIARNYDGTYSAQRQELVEAQEGYAILQDNFIAAVSRPVYRRWLATAITAGVIDVPTDTDMATLFNAVYSGPVMPWIDPLKEANAWRILIRGGAATESDWVRARGGAPAEVKRRRKAEIDENRKLGLVFDTDPAHDPGEQDNAGSEDNSGGDKNAAGDDSRERTRGGKQ
1077792..1079873                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage Clp protease involved in capsid processing; STMDT2_09691; phage(gi169257302)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MKTTVAAIKMPPVMTAGNGRGEGSSNSWYSIRAAANNTAEVRIYDEIGGWGISARWFAEELAALGQINRINLHIHSPGGAVLDGIAIYNLLKNHPAQKTVYIDGMACSMASAIAMVGNPIIMPENAMMMIHKPRGVAGGEAEDIREYADLLDKIESVIIPIYTEKTGKTPEDIAAMLAKETWMSGAECVSEGFADKLIQPVKAMACIHSKRVEEFEHMPQSIKGMIIAPQGNAGAQPQPQAKAPESQIQSQAQSLVTVDENAIRARLQEEQRNRITGIQNVFSLSGDRYASLMAKCIADVDCSLEMAKDRLLAEMAKGITPTNQLNGPQNRAEFHAGMYTGNGNITGDAVRAAVMARAGYEEAQKDNPYNCMTLRELARISLVARGTGVSSMNPMQMIGMAFTHSTSDFGNILLDVANKSILQGWQEAPETFDAWTKKGQLSDFRIAHRVGMGGFSSLRQVREGAEYKYVTTGDKQATIALATYGELFSITRQAIINDDMNMLTDVPMKLGRAAKATIADLVYDVLISNQKLSSDNVALFDKTKHANVLEKAVMDVASLDKARQLMRMQKEGDRHLNIRPAFVLVPTAMESVSNQVIKSVSVKGADINAGIINPVKDFATVIAEPRLDDASQSTFYLTAAKGSDTVEVAYLNGVDEPYIDQQEGFTVDGVTTKVRIDAGVAPVDYRGMVKCTV
1079964..1080287                   PHAGE_Phage_Gifsy_2_NC_010393: conserved hypothetical bacteriophage protein; STMDT2_09701; phage(gi169257303)     8.23e-70            SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MAKNYVEDGKTIEIVATTSLKSGDLVQVGDMFAVAVTDIAAGSAGTGIAEGVFSIPKLTTEDIAVGKKVYLKDNVVQTDATGSLPYVGVVWAPAANGDETVPVKING
1080280..1080579                   PHAGE_Phage_Gifsy_2_NC_010393: conserved hypothetical bacteriophage protein; STMDT2_09711; phage(gi169257304)     3.37e-65            SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MADLFDGMKRRMDALIAERFGMKVNINGTDCIVVESDFLAELGPVEGNGKNVVVFSGNVIPRRGDRVVLRGSEFTVTRIRRFNGKPQLTLEENNGGKGA
1080560..1081126                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage morphogenesis protein; Lambda gpZ homolog; STMDT2_09721; phage(gi169257305)     1.52e-134           SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MEVKGLKEAISVLKELDRGYVTRAKIRAINRVAKRVVSVSVRSAAALVVAGDNRRQGIPVRTVRRRARVRLARADKPFANIYVNCDPLTAIRLLSSPPSTPMRGRKGKPLRIGKYRFDRGFIAQAPNGWWQVFERSGAGRYPLNVVKIPVADALRHAFNTQVVLQMKTEMPKELKHEISYELRRFTKK
1081123..1081524                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail shaft stabilization protein; Lambda gpU homolog; STMDT2_09731; phage(gi169257306)     6.36e-94            SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MTRHSAVRQAIIAALKKTDDGSTTFFDGRPVVVEEDELPAVAVYLSDAQYTGPEVDGDIWSAVLHVEVFLKATAPDSALDEQMENRVYPALGSVAGLGDIIRTMSAQGYNYQRDDEMAMWGSADLSYDITYSM
1081599..1082285                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage major tail protein; Lambda gpV homolog; STMDT2_09741; phage(gi169257307)     3.09e-163           SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MYNSEGDPFASPLSDNNWLRLANVKDLQPGELTADAEDNNYLDDENADWKSTTQGQKSAGDTSVTLAWKPGEDVQKKLIQLFTTGQKRGFRIKYPNGTVDVFRGWVSSLGKTVQSKDEIARTVKITSVGRPYMAEEDAPEVVSVTGLTVEPTNATVKVGATTAVTFTVKPDNVTDKSLRIATSDPTTATVTQAENIATVKGVKAGTVKIIGMTTDGNFTAIADITVQA
1082331..1082729                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail assembly chaperone; Lambda gpG homolog; STMDT2_09751; phage(gi169257308)     1.13e-91            SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MFLKKETFTRGDASVALFELSGLQRIEYLEFIQKRTAKYDTDMDGTTEADKRVAYMQMALEINAWLVSRSLLNGDSSQDADTLYQSVQAKWSYEALDAGAESVLMLSGLSADKKDNASDSGNESEDMTPEKS
1082792..1083055                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail assembly chapterone - part of G+G' frameshift hybrid protein; Lambda gpT homolog; STMDT2_09761; phage(gi169257309)     8.51e-56            SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MLDEMSSTELSEWADFFRENSFSDALLDAEFSTLKAQVFMLVTGKEIDAADFSLLTLPGAVQSMTEQDLLEVAVGIPGGVRFEPESR
1083069..1086122                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail tape measure protein; minor tail protein; Lambda gpH homolog; STMDT2_09771; phage(gi169257310)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MDVDTAKVAAGLQTASNGLGKLVDSSDLVEKRIKRCMESSARSVAASAKSISAAMAQSQVATRTQSDAMAQLAREANEARERAVDLNQKLRAEAAQAAVVAQAQDAAAAAFYRQIDSVKQLSGGLQELQRIQAQVRQAKGRGDISQGDYLALVSEAAAKTRELTDAEALATQKKAQFIRRLKEQTAVQGLSRTELLRVKAAELGVSSAADVYIRKLDTATKSTHALGLKSAMARREIGVLIGELARGNFGALRGSGITLANRAGWIEQLMSPKGMMLGGLVGGVAAAVYGLGKAYYEGAKESEEFNKQLILTGSYAGKTTGKLNEMAKSLAGNGVTQHDAAGVLTQVVGSGAFTGQAVAMVSRTAARMQENVGQSVDETIRQFKRLQDDPVNAAKELDRALHFLTATQLEQIRVLGEQGRTADAAKIAMSAYSEEMNKRAGDVHDNLGWIEKAWNAVGDAAKWAWDRMLDIGREDTLDEKIATLQEKIARARKTPWTVSSSQTEYDQQQLNELQEQKRQKDLLDAKAQAERNYQKTQKRRNEQNAALNRDNETESLRHQREVARITAMQYADAAVRNAALERENERHKKAMARQKEKPKAYYNDEAGRLLLQYSQQQAQTEGLIAAAKLSTTEKMTEAHKQLLSFQQRIADLSGKKLTADEQSVLAHKDEIALALQKLDISQQDLQHQNAFNELKKKTLTLTSQLADEESRVRQQHALALATMGMGDQQRGRYEEHLKIQQHYQEQLEQLKRDSKAKGTYGSDEYRQAEQELQASLDRRLAEWADYNAKVDAAQGDWTQGASRALDNFLAQGGNVAGMTENVFTNAFNGMADSIANFAVTGKGSFRSLTVSILADLAKMEARIAASKLLGSVLGMFVFGASAGGSTPSGAYSSAALSVIPNADGGVYRSAGLSQYSGSIVNRPTFFAFARGAAVMGEAGPEAILPLRRGTDGKLGVVAAGSGGMAMFAPQYHIAISNTGPELTPQALKAVYDLGKKAAADFVQQQGRDGGRLSGAYR
1086119..1086451                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail tip assembly protein; Lambda gpM homolog; STMDT2_09781; phage(gi169257311)     1.73e-78            SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MMKTFHWKVDPDMGVDSEPQVSVVRFGDGYEQRRASGINNDLKKYSVTIRVDREDGPGLEGFLSQHNGVKAFLWTPPYGYRQIKVVCRKWSVKAGLLKTTFTATFEQVIS
1086550..1087047                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage virulence determinant; Lom homolog; STMDT2_09791; phage(gi169257312)     2.92e-113           SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MKKIVVAVLVGLALGSIGVANAAGYKNTVSIGYAYTDLSGWLSGNANGANIKYNWEDLDSGFGAMGSVTYTSADVNNYGYKVGDADYTSLLVGPSYRFNDYLNAYVMIGAANGHIKDNWGNSDNKTAFAYGAGIQLNPVENIAVNASYEHTSFSTDADSDVKAGT
complement(1087164..1087697)       PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage virulence determinant; superoxide dismutase precursor; STMDT2_09801; phage(gi169257313)     6.02e-125           SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MKYTILSLVAGALISCSAMAENTLTVKMNDALSSGTGENIGEITVSETPYGLLFTPHLNGLTPGIHGFHVHTNPSCMPGMKDGKEVPALMAGGHLDPEKTGKHLGPYNDKGHLGDLPGLVVNADGTATYPLLAPRLKSLSELKGHSLMIHKGGDNYSDKPAPLGGGGARFACGVIEK
1087787..1088482                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail tip assembly protein; Lambda gpL homolog; STMDT2_09811; phage(gi169257314)     7.93e-174           SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MQDIPQETLSETTKAEQSAKVDLWEFDLTAIGGERFFFCNEPNEKGEPLTWQGRQYEPYPIQVQDFEMNGKGASPRPNLVVANLFGLVTGMAEDLQSLVGASVVRHQVYSKFLDAVNFSNGNPDADPEQEAVARYNVEQLSELDSSTATIILASPAETDGSVVPGRTMLADSCPWDYRDENCGYDGPPVADEFDKPTSDPKKDKCSHCMKGCEMRNNLVNAGFFASINKLS
1088492..1089229                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail tip assembly protein; Lambda gpK homolog; STMDT2_09821; phage(gi169257315)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MINDDILAHARQCAPAESCGYVVRTAQGERYFPCENLSAEPTMYFRISPEDYLNARNRGDIVALVHSHPDGKPCLSSADRTLQIQSGLDWWLVCDNRIHKFRCVPHLTGRQFEHGVTDCYTLFRDAYHLARIDMPDFDREDDWWSQGKSLYLDHLEAAGFYRVNPEDAQPGDVLICCFGSPTPNHAAIYCGNGELLHHIPEQLSKREGYNDKWQRRTHSIWRHRQWCESAFTGIYNDLESASASA
1089127..1089831                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail tip assembly protein; Lambda gpI homolog; STMDT2_09831; phage(gi169257316)     2.31e-170           SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MATTDTLNMAAPAMVRICLYGDLQRFGKRISLSIKTAAEGIHALAIQLPGFRQRMNEGWYQVRIAGSDMAPDTLTARLNESLPPGAVVHIVPRMAGAKNGIWQVVAGAALIGASFIPGLNAVAAAVLFSAGTSMALGGVAQMLTPVPKTPTVGQADNGKQNTYFSSLENMVAQGNPVPVLYGEMKIGSRVISQMMSTRDESTSGKVVVIGSPLQANTTSRQDGGITRPSVVIRQ
1089903..1093253                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail fiber (host specificity) protein; Lambda gp J homolog; STMDT2_09841; phage(gi169257317)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MSKGGGKGHTPREAKDDLKSTQQLSVIDALSEGPIVGPVNGLQSVLINNTPVVDADGNSNIHGVTVVYQVGETPQAPLEGFEASGAETVLGVEVKHDNPVTRTVVSENVDRLRFTFGVQMLQETTDKGDRNPSSVNLLIQFQRSGIWNTEFDITINGKITTQYLASVVADNLPPRPFSVRMVRVTPDSTTDRLQNKTLWSSYTEIIDIRQGYPGTAVAGLLVDAEQFGSQQVTRNYHLRGRIFQVPSNYDPDTRTYTGLWDGAFKPAYTNNPAWCTMDKLTHPRYGLGRRIGGADVDKWALYAIAQYCDQPVPDGFGGTEPRMTLNAYITTQRKAYDVLADFCSVMRCMPVWNGRKMTFIQDRPSDKAWTYTNGNVVGGRFKYSFSALKDRHNAVEVRYTDPLNGWQTSTELVEDHASQARYGRNLLKMDAFGCTSRGQAHRTGLWVMMTELLETQTVDFSVGAEGLRHTPGDIIEVCDNDYAGASVGGRITDLDISTRTLTLDREITLPESGATTLNIVGPDGKPFSTEIQSQPAPDRVVTKVLPETVQPYSIWGLKLPSLKRRLFRCVRIKENDDGTYAITALQHVPEKESIVDNGAHFDPLPGTTNSIIPPAVQHLTVSTDNDSTLYQAKAKWGTPRVVKDVRFVVRLTTGSGNEGDPVRLVTTATTSETEYAFHELPLGDYTLTVRAINGYGQQGEPASVAFSIQAPEAPSTIEMTPGYFQITVTPHQTVYDASVQYEFWYSATQLATAADIQSKAQYLGVGSFWIKDGLKPLHDAWFYVRSVNLAGKSVFAEASGRPGDDAKGYLDFFKGLITETYLGTELLKKIDLTENNASKLQQFSKEWQDANDKWSATWGVKIEQTKDGKYYVAGLGLSMEDTPDGKISQFLVAADRIAYINPANGNETPGFVMQGDQIIMNEAFLKYLSAPTITSGGNPPAFSLTPDGKLTAKNADISGHINAVSGSFTGEINATSGKFSGVIEAREFVGDICGSKVMQGVSIRETNDERSTSTRYTDSATYQIGKTITVMANCERNGGSGAITVTININGQVKTAEVIPYTAGLPAMYQTVVFSVYTTSPVVDISVSLRVRGQYTTSASVWPLVMVSRSGNNFTN
1094278..1096026                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage side tail fiber protein; Lambda gpStf (gpN) homolog; STMDT2_09851; phage(gi169257320)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrDT2AAQTSAERAGASETAAKTSETQAASSAGDAGASATAAAASEKAAAASAAAAKTSETNAATSASTAAASATAASSSASEASTHAAASDTSASLAAQSSTAAGAAATRAEDAAKRAEDIADVISLEDASLTKKGIVKLSSATDSDSEALAATPKAVHAVMDEVQTKAPLDSPALTGTPTAPTPETAAAGIEIATAAFVAAKVAQLVGSAPETLDTLKELADALGNDPNFATTVLNKLAGKQPLDDTLTALSGKSVDGLIEYVGLRETINHAADALLKSQNGGDIPEKPLFVQNIGALPASGTAVAANRLASRGALPALTGATRGSDSGLIMGEVYNNGYPTQYGNILRLTGTGDGEILIGWSGTNGAPAPAYIRSHRDTADAEWSEWAMLYTSLNPPPNSYPVGAAIAWPSDATPAGYALMQGQSFDKSAYPLLAIAYPSGIIPDMRGWTIKGKPISGRAVLSQEMDGNKSHSHSARAQDTDLGTKSTSSFDYGTKSTNTTGNHTHQFGGYINSYWGDSNHTSFQPGGGAWTQAAGDHAHTVYIGGHEHTMYIGPHGHVVIVDADGNAETTVKNIAFNYIVRLA
1096026..1096607                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage side tail fiber assembly protein; Lambda gpTfa analog; STMDT2_09861; phage(gi169257321)     8.40e-143           SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MTFKMSEQAQTIKIFNLRSDTNEFIGAGDAYIPPHTGLPANCTDIAPPDIPASHIAIFDAETQTWSLHEDHRGEMVYDTTTGNQVYISAPGPLPENVTSVSPGGEYQKWDGKAKVWVKDEAAEKAAQLRQAEETKSRLLQMASEKIAPLQDAVDLGIATDDEKARLDEWKKYRVLVNRMDTAAPDWPERPASQ
complement(1096611..1096826)       PHAGE_Salmon_SJ46_NC_031129: membrane-associated initiation of head vertex; STMDT2_09871; phage(gi100034)     9.03e-24            SalmonellaentericasubspentericaserovarTyphimuriumstrDT2QAEVTRQKLLNDSDNAIKDWRIELTLGIISDENKAALILPMNYINVLKSLDLTGVSDEATFTAIRWPALPQ
1097083..1098051                   PHAGE_Phage_Gifsy_2_NC_010393: prophage virulence determinant; secreted effector protein; STMDT2_09881; phage(gi169257322)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MPFHIGSGCLPAIISNRRIYRIAWSDTPPEMSSWEKMKEFFCSTHQAEALECIWTICHPPAGTTREDVVSRFELLRTLAYDGWEENIHSGLHGENYFCILDEDSQEILSVTLDDVGNYTVNCQGYSETHHLTMATEPGVERTDITYNLTSDIDAAAYLEELKQNPIINNKIMNPVGQCESLMTPVSNFMNEKGFDNIRYRGIFIWDKPTEEIPTNHFAVVGNKEGKDYVFDVSAHQFENRGMSNLNGPLILSADEWVCKYRMATRRKLIYYTDFSNSSIAANAYDALPRELESESMAGKVFVTSPRWFNTFKKQKYSLIGKM
1098149..1098567                   PHAGE_Stx2_c_1717_NC_011357: transposase; STMDT2_09891; phage(gi209447153)           1.10e-43            SalmonellaentericasubspentericaserovarTyphimuriumstrDT2SPAQTRLSVRKEKSQSLYDWIQAQLKTLSVHAEMAKEFGYMLKQCDALSVSSAATVGVEIDNNICENALRCVALGRRNYLFFGSDSSGEAAAIIYSLLGTCKLNDVESEAWLRDVLWKISDWSSNRVHELLPWNLETVK
complement(1098699..1099325)       PHAGE_Pseudo_F116_NC_006552: hypothetical protein; STMDT2_09901; phage(gi56692976)     3.72e-36            SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MCGRFAQAQTREEYLAYLADEADRNIAYDPQPIGRYNVAPGTKVLLLSERDEQLHLDPVIWGYAPGWWDKAPLINARVATAASSRMFKPLWQHGRAICFADRWFEWKKEGDKKQPYFIHRKDGKPIFMAAIGSTPFERGDEAEGFLIVTSAADKGLVDIHDRRPLALTPETARVWMRQFLEPHSKSITYRVIPALTRPMMRKDTNPCQ
complement(1099394..1099693)       hypothetical phage protein (pseudogene); STMDT2_09911                                N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MYHFMIVNLYQDNYSGYRQHGGAEVQILSCRPKFPLKTSLSGLFFLWLNFLRGSYGVKLGNKAVEIRRNLRLIHQFAHCSVSEFINTQIFISNYCINSL
complement(1100635..1100826)       PHAGE_Entero_mEp390_NC_019721: DinI-like family protein; STMDT2_09931; phage(gi428782688)     5.87e-34            SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MFVELVYDKRNVEGLEGASEIILAELTKQVHQIFPDAEVRVKPMQANCLNSDTNKSDRENLNR
1101132..1101146                   attR                                                                                 N/A                 TTATAAAAATGTAGC

#### region 3 ####
1907577..1907945                   PHAGE_Entero_HK022_NC_002166: integrase; STMDT2_17821; phage(gi9634144)              6.28e-24            SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MKIALPLSLNLPSMGLRLSTVIERCRLVSRSEYLISAGIRKNSPNGSIHPNSLTKKFVAARKLTGINFSENPPPFHEIRSLSGRLYKDAYGEGFAQKLLGHTSENTTKLYLDERDNKAYVML
1908089..1908111                   attL                                                                                 N/A                 AAAAAGAGACCGAATACGATTCC
complement(1908440..1908673)       putative product; STMDT2_17831                                                       N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MECFYMATLREMLSPRYTTRYEDLLQVKWQVYPDFHIPDVMEPQPHRMQERAAASWRSFDSASIEWLPVAADFTCSR
complement(1908609..1908749)       hypothetical protein; STMDT2_17841                                                   N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MFVSQGDRKNYSFAPGRRQEEITRCNRMFLYGDLKRNAFASVYHPL
complement(1908683..1908808)       hypothetical protein; STMDT2_17851                                                   N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrDT2NSLNVRCPRTIVNQRHSKNNCLFHKEIEKTIALRRGGGRRR
complement(1908771..1908854)       hypothetical protein; STMDT2_17861                                                   N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrDT2EAPETAPAEFRQEALKLAECTLPANDC
1909258..1910172                   inner membrane protein (PagO); STMDT2_17871                                          N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MRKVSISILFMLVSLTWGTTWLAMRIAVETIPPVFATGMRFMFAAPFLIIIAWLRKKTLLFPPGQRLFQFVICIFYFCIPFSLMIYGETYVNSGLAAIIFANMPVAVLIASVLFLNEKAKLMQIAGLTIAITALTGILLEETNTSTESHWQGITALISAVLIHAIIYTQCKKRSCTVSVITFNALPCLLAGLILSATGWFFERPQVSTFSVHSILATLYLGAFAGVFGILCYFALQQKANAFQASLVFLIFPLIAVSLEDYIYGYAISTHSMLLIIPLVIGIFLTLVARNLPVTSRCRDNSSQK
1910305..1910463                   putative inner membrane protein; STMDT2_17881                                        N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MFMFLPFLLALSVAMGAINRKDKVSYILWAVLLIVTILSFIHHMTNSLTLSF
1910473..1911087                   hypothetical protein; STMDT2_17891                                                   N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MKTHHHPTTFVHLINQVGLLGICVALVVAFYYQLVRHELPCPICLLQRAGLIIAGFGFLFNLCFGLRGIHYGMVIIGSILTGVMASRQICLHIMPGDTGYGSAFFGLHFYTWTLITSILIIIAVAVILAISSMNVAFRSLNINPDLFSIVGWVFLLLITANLISTVLECGGGECAANPVTYKLLSKQDIAFLKTGLLTRTVLRL
complement(1911414..1911560)       PHAGE_Salmon_SJ46_NC_031129: DNA polymerase; STMDT2_17901; phage(gi100036)           1.37e-16            SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MGGRRPKLTPEQWAQAGCLIRAGVPRQQVAIIYDAGLSTLYRKFPVLG
complement(1911840..1912022)       virulence factor; STMDT2_17911                                                       N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MFSLIKSRKVLFITTLLLLSSAAQPAFALGCIGDGGSTADCAKVCSLAAGLGPLGFLICF
1912360..1912482                   PROPHAGE_Escher_MG1655: IS3 transposase B; STMDT2_17921; phage(gi16128284)           3.77e-11            SalmonellaentericasubspentericaserovarTyphimuriumstrDT2RRTVVNTHQQFRQECDNVVREAFSQAKQRYGAPRLAEEVNL
1912930..1913130                   PHAGE_Phage_Gifsy_1_NC_010392: PagK-like protein; STMDT2_17931; phage(gi169257211)     3.94e-42            SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MKHVKSVFLAMVLILPSSLYPALTIAADSQDHKKEETIKPMPQKWCNLWPAGIPFPEDWFKMCRGY
complement(1913227..1914108)       PHAGE_Salmon_Fels_1_NC_010391: putative bacteriophage tail assembly protein; STMDT2_17941; phage(gi169257205)     1.04e-89            SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MYIGPHGHVVIVDADGNAETFGLMDGGVDAAITAYFGSQLQERVQQNIIREYLGEQPVGTAFVIETGNSKHPWLVPAPTMRVPLIIDGTDAVYNATRAALLAIFQHNKSAGEDRKITSVALPAMGAGCGQVPPGQRRPANCTDIAPPDIPSSHIAVFDAETQTWSLQEDHRGETVYDTTTGNQVYISDLGPLPENVTSVSPGGGYKKWDSKAQVWMNDEAAEAAARLREAEGTKNRLLQIASEKIAPLQDAVDLDEATNKEKASLLAWRKYRVQVNRVDTLKPVWPEKPASSL
complement(1914263..1914526)       PHAGE_Salmon_Fels_1_NC_010391: bacteriophage terminase, small subunit; STMDT2_17951; phage(gi169257184)     1.02e-56            SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MDGELKNLKCNISQLAAITGLHRQTVVSRLSGVPLALGSNEKNKLYLLTDVIRVLMETPVSQAAEHQDPNKMTPKERKNWFDSEKGR
1914834..1915001                   putative phage membrane protein; STMDT2_17961                                        N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MKNIITIIVAIIIVFYAGMWSQKFLMEDECLDSGGSYNENGICNIAGSHQDVPPK
complement(1915258..1915791)       PROPHAGE_Salmon_LT2: phage-tail assembly-like protein; STMDT2_17971; phage(gi16765210)     1.40e-124           SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MNLLSALLKRYWLQLVFILLMAGAFIAGNVWSDRGWQKKWADRDSAESSQEVNAQTAARIIEQGRVIARDEAVKDAQAQAAKSAATAAGLSATVSQLRTEAKKLATRLDAAKHTANLAAAVRSKTTNADARMLANMLGDIAEAAKHYAGIADERYRAGMTCERVYDSVRESNNYRRH
complement(1915845..1916075)       PHAGE_Salmon_Fels_1_NC_010391: putative bacteriophage endolysin; STMDT2_17981; phage(gi169257182)     5.24e-38            SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MNGKKAFAPRSAKIRITGLENYTRCGVALKLDLVANPGQLELERHAARSAAWLFVTKGCLKYSGDLVRVTQIINGG
1916106..1916759                   PHAGE_Shigel_Stx_NC_029120: exodeoxyribonuclease VIII; STMDT2_17991; phage(gi985761253)     6.56e-27            SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MPDNTPTTHEENAARLSQAGKCLRDIEAGRFQCDEEKQQPTGELADEPATPEAVEQDTTEHHPDPQPLENEPPVSQTEAGYQKIRAELHEARKNIPPKNPVDVGKQLAAARGEYVEDISDPNDPRWVHNNYSASNQGEKEEVVPEGKQPAAEPEAVTRNADGTFDVSALFLPPSNQTEKTEARTERDGETPKESNQQETAGDTGQEITTDGGSGTTS
1916777..1917673                   PHAGE_Entero_HK022_NC_002166: integrase; STMDT2_18001; phage(gi9634144)              5.83e-84            SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MALIEKLKGTDSFTVSAWIDRYEVLLQRRNLSVNTYKIRSNQLATVREKMGEIILAEVTTRHIAKFLESWITEGKNTMAGAMRSVLSDMFREAIVEGHIVKNPVEATRIPEIKVARERLQLETYNATRAAAEHMPAWFPLAMDLALVTGQRREDIVNMKFSDVFDNRLYVTQIKTGMKIAIPLSLTLRATGLRLGTVIDRCRLVSRTDFMISAGIRKNSPTGNIHPDGLTKTFVKARKASGVNFSNNPPTFHEIRSLAGRLYKNEHGEVFAQKLLGHTSENTTKLYLDERDNKAYVML
1917804..1917826                   attR                                                                                 N/A                 AAAAAGAGACCGAATACGATTCC
complement(1918047..1918400)       PHAGE_Salmon_SEN1_NC_029003: hypothetical protein; STMDT2_18011; phage(gi971764937)     9.60e-12            SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MKKILLPALLLATSGVALAAPQVITVSRFEVGKDKWAFNREEVMLTCRPGQALYVINPSTLVQYPLNAIAEQQVAEGKTRAQPIAVIQIDNPAKPGEKMSLAPFIERAQKLCDPSNS
complement(1918417..1919292)       putative cation transporter; STMDT2_18021                                            N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MMLTFVWITLRFIHFASVMLVYGCALYGAWLAPASIRRLMTRRFLHLQQHAAAWSVISAAFMLAVQGGLMGGGWPDVFFVSVWGAVLQTRFGAVWIWQIILALVTLAVVVIAPVKMQRRLLILTVAQFILLAGVGHATMRDGVAGTLQQINHALHLLCAAAWFGGLLPVVYCMRMAQGRWRQHAISAMMRFSRYGHFFVAGVLLTGIGNTLFITGFTAIWQTTYGQLLLLKCALVVLMVAIALTNRYVLVPRMRQENPRTDLWFVRMTQIEWGVGGIVLAIVSLFATLEPF
complement(1919293..1919673)       putative cation resistance protein; STMDT2_18031                                     N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MNMASSAPSRRLALLLLASTFATPAAWAHAHLTHQYPAANAAVTASPQALTLNFSEGIEPGFSGATITGPQQELIKTRPAKRNEQDKTQLIIPLEQPLKSGAYTVDWHVVSVDGHKTKGKYTFSVK
1919805..1920035                   PHAGE_Pectob_ZF40_NC_019522: putative DNA polymerase; STMDT2_18041; phage(gi422936677)     8.51e-23            SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MKTNLAQLEQAEMDKVNVDLAAAGVAFKERYNMPVVAEAVEREQPEHLRAWFRERLIAHRLASVSLSRLPYEPKVK
1920143..1920799                   hypothetical protein; STMDT2_18051                                                   N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MSSWKIAAAQYAPLNASPAEHVAHHLEYIELAARQQCELLVFPSLSLLGCDERNKSLPAPPDEALLQPLTHAADTHHMTIIVGMPVEHNCRFVKGIAIFAPWLTSPLMFHKSHGACIARQRSAINVVDEQPEGGDIDPSFTLFTTSQCLNEPELHASTSRLQRFSHKYALAVLMANACGSSALWNESGQLIVRADCGSLLLTGLRTTEGWQGDIIPLR
1920823..1921521                   PHAGE_Pseudo_H101_NC_029094: exodeoxyribonuclease X; STMDT2_18061; phage(gi985760125)     8.55e-19            SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MLRIIDTETCGLQGGIVEIASVDVIDGNIVNPMSHLIRPDRPITPQAMAIHRITEAMVADKPWIEDVIPLYYGSEWYVAHNASFDRRVLPELPGEWICTMKLSRRLWPGIKYSNMALYKSRKLSVQTPPGLHHHRALYDCYITAALLIDIMRTTGWTAEEMVNITGRPALLTTFPFGKYRGKAVSEVAKRDPGYLRWLFNNLDNMSPELRLTLKHYLEDVQAGEQRSNGTPQ

#### region 4 ####
2028782..2028793                   attL                                                                                 N/A                 CTAAAATCTGGC
complement(2028974..2029186)       PHAGE_Lactoc_bIL312_NC_002671: Csp; STMDT2_19191; phage(gi13095918)                  1.74e-21            SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MTTKITGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNEFRTLNENQEVEFSVEQGPKGPSAVNVVAL
complement(2029641..2030909)       PHAGE_Salmon_vB_SosS_Oslo_NC_018279: error-prone lesion bypass DNA polymerase V; STMDT2_19201; phage(gi399528790)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MFALCDVNSFYASCETVFRPDLCGRPVVVLSNNDGCVIACSAEAKQLGIAPGEPYFKQKERFRRSGVVCFSSNYELYADMSNRVMTTLEEMVPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLKRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTDGVVDLSNIDRQRRLLALIPVEDVWGVGRRISKKLNALGIKTALDLSEQSTWIIRKHFNVVLERTVRELRGEPCLELEEFAPAKQEIVCSRSFGERVTDYEEMRQAVYSYAARAAEKLRGEHQYCRFISTFVKTSPFALNEPYYGNSAAVTLLTPTQDSRDIINAAVKCLDKIWRDGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRAGSAKLMEVLDHLNAKDGKGTLYFAGQGMSQQWAMKREMLSPRYTTRYSDLLRVK
complement(2030912..2031331)       PHAGE_Salmon_vB_SosS_Oslo_NC_018279: errror-prone repair protein UmuD; STMDT2_19211; phage(gi399528789)     2.45e-40            SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MEFFRPTELREIIPLPFFSYLVPCGFPSPAADYIEQRIDLNELLVSHPSSTYFVKASGDSMIEAGISDGDLLVVDSSRNADHGDIVIAAIEGEFTVKRLQLRPTVQLIPMNGAYRPIPVGSEDTLDIFGVVTFIIKAVS
complement(2031458..2031619)       hypothetical protein; STMDT2_19221                                                   N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MGAGQKINCCEGNALARGDNLRCGTVDAVQKIWPPGWLKYAHMTIQPENLQNP
complement(2031597..2031860)       hypothetical protein; STMDT2_19231                                                   N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrDT2NILLEYYVKNVSPSYAFSARRGGQGWCYFYFSIISQLLVFCPALSPYPIWINIDVTRGDLTPSSSVIVAPGLLPDMFPCRHGRRAED
2031969..2031983                   attL                                                                                 N/A                 CGGTTTTCGAGACCG
complement(2032250..2032444)       PHAGE_Salmon_ST64B_NC_004313: DNA invertase pin protein; STMDT2_19241; phage(gi23505471)     1.55e-39            SalmonellaentericasubspentericaserovarTyphimuriumstrDT2GEIGGRRPKLSPEQWAQAGRLIGAGIPRQQVAIIYDVGLSIHGLYWILLSANRKGVKKRDYRAN
2032684..2033691                   PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; STMDT2_19251; phage(gi23505470)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MFSRVRGFLSCQNYSHTATPAITLPSSGSANFAGVEYPLLPLDQHTPLLFQWFERNPSRFGENQIPIINTQQNPYLNNIINAAIIEKERTIGVLVDGNFSAGQKKALAKLEKQYENIKVIYNSDLDYSMYDKKLSDIYLENIAKIEAQPANVRDEYLLGEIKKSLNEVLKNNPEESLVSSHDKRLGHVRFDFYRNLFLLKGSNAFLEAGKHGCHHLQPGGGCIYLDADMLLTGKLGTLYLPDGIAVHVSRKGNSMSLENGIIAVNRSEHPALKKGLEIMHSKPYGDPYIDGVCGGLRHYFNCSIRHNYEEFCNFIEFKHEHIFMDTSSLTISSWR
complement(2033976..2034575)       PHAGE_Salmon_ST64B_NC_004313: Probable tail fiber assembly protein; STMDT2_19261; phage(gi23505469)     1.41e-138           SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MVYRTRGNGIMKKYQNIKNFRLIDAPVNRDKTQAEINIGAYFLESDDGQDWYECQSLFSDDTAKIMYDHEGVIWGVVNKPVPQRGNTYSVSMLWPVNMSVAEIDAADCPDDCRGDGTWLYQDGKVVQRGYSPEELRKKAEAEKVRRLAEAESAIAPLARAVKLKIATDEEIKRLEAWELYSVMVNRVDTSAPDWPDIPR
complement(2034545..2036140)       PHAGE_Salmon_ST64B_NC_004313: tail protein; STMDT2_19271; phage(gi23505468)          0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MLFLLIRKEKRMHRIDTPTAQKDKFGQGKNGFTNGDPATGRRATDLNSDMWDAVQEEVCTVIEAAGIPLSKGEHTQLHAAIGRLIDEQVKTRLEKNQNGADIPNKPLFLQNVGLGETINLAAGALQKSQNGGDIPDKKQFARTIGAVTSTTITLGESGWFKIATVVMPQATSTAVIKLYGGAGFNAGSPEQAAISELVLRAGNGSPVGITATLWRRSPSAANEVAWVNTSGDTYDIYINIGQYAYWLIAQYDYTGNANVTLHSTPEYSSVQPGNSTSGQTYTLFNSLMKPTAGDVEALSVNGGRLNGPLGIGTDNALGGNSIVFGDNDTGFKWHSDGVLGIYANNALVGYIDNSGLHMSVDVLTNGAVRAGNAKKLSLTSNNNSTMTATFNLWGDANRPTVIELDDDQGWHLYSQRNPDGSIVFTVNGDITANTLRAGGAIYQNNGDIFGSLWGNGWLSTWINNNLVLDVQLGAGTSVTTWNNAGSWPNTPGYVVTSVWKDYQGENIDGINYAPLQKRVGSQWYTVQGGTV
complement(2036094..2036681)       PHAGE_Salmon_ST64B_NC_004313: putative tail protein; STMDT2_19281; phage(gi23505467)     7.68e-145           SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MALQDEYTQLLYHLLPEGPAWDGENPLIEGLAPSLNRVHQRADELMAEIDPARTTELIDRYEQLYGLPDSCAPEGVQTLQQRQQRLDAKANVAGGINERFYREQLDALGYTAATIEQFQNLDSTPDPEWGEFWRYYWRVNIPADANISWQTCTSTCDSAIRTWGDTVAECVIDKLCPSHTVVVFAYPEGKENAQN
complement(2036684..2037205)       PHAGE_Salmon_ST64B_NC_004313: putative tail protein; STMDT2_19291; phage(gi23505466)     2.91e-122           SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MERYYWIPQGGADPDYVIWAKEIAGITRAWTFRHYKGTGTVGVMVATSNPVNPAPGDDLVKAVRDHILPLAPVAGGGLFVFAATEKSIPVTVALAKDTPEIRTAIIAELNALMLRDGAPSGKIYVSRISEAISLATGEVAHQLRVPAADVVLGKTELPVLGNITWATYTGENG
complement(2037240..2037785)       PHAGE_Salmon_ST64B_NC_004313: putative head assembly protein; STMDT2_19301; phage(gi23505465)     1.09e-130           SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MIYGANLMADSQFARPELPQLIATIRSDLLTRFQQDVVLRRMDAEVYSRVQAAAVHTLYGYIDYLARNMLPDMCDEDWLYRHARIKRCPRKNAVSAKGFARWDGIAGTPEIPAGTQIQRDDQVTFTTLQTVKASGGLLRVPVIADVAGTAGNTDDGTALRLGTPITGIPSTGYADTLTGGG
complement(2037757..2038170)       PHAGE_Salmon_ST64B_NC_004313: putative tail protein; STMDT2_19311; phage(gi23505464)     3.87e-96            SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MILYVNGIRKDATASLDFLTRAVVISLFTWRRAERDDRTPQPYGWWGDTWPAVQNDRIGSRLYLLKRRKLTNKTPQDAREYMQQALAWMTDDGVAARIDVTSERTGTDTLAAGVTIYQRDGVIHNITFDDIWSKLNG
complement(2038175..2038708)       PHAGE_Salmon_ST64B_NC_004313: putative base plate assembly protein; STMDT2_19321; phage(gi23505463)     2.39e-129           SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MANHPLQNMITRAVITAIDTVRKCQTAGLKLIAGEKKENVEHLEPYGFTSAAQNGAEAVVLFPGGDRSHGVAVVVADRRFRLKGLARGEVALYDDQGQSVTLTRAGIVVNGGGKPVIFTNATKARFEMPIESTGDIRDNCDSSGKTMAEMRTTYNGHTHKENGDGGGITDKPGQPMS
complement(2038708..2039766)       PHAGE_Salmon_ST64B_NC_004313: Tail protein; STMDT2_19331; phage(gi23505462)          0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MNNTVFLRVNGRDWGGWTSVRISAGIDRIARDFNVSITRQWPGGEDVPPVKNGDSVEVLIGDDLVITGWVEALPLRYDAQTIMTGIVGRSKTADLIDCSASPAQHNGENLFLIASALARPFGVDVVDAGAPAAAVIEAQPEHGETVVDCLNRLLGQAQALAYDDERGRLVLGRPGSMKAATALVLGENILSCDTERSVRERFSSYLVTGQRPGTDDDFGEATIAAIRQSTGDAGVTRYRPHTIQQSGTATTDSCKSRCEFEARQRAAKTLETTYTVQGWRQGNGELWKPNQAVVVYDPLNGFDNETLVIAEVTYSQDNNGTLTEIRVGPADAYLPEPFRPKAKKKVSEEADF
complement(2039763..2041103)       PHAGE_Salmon_ST64B_NC_004313: tail/DNA circulation protein; STMDT2_19341; phage(gi23505461)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MAFFSSTGWRGRLRDASFRGVPFSVEDDESTFGRRVQVHEYPNRDKPWTEDLGRATRRLTINAYLVGDDYADRRDRLIGAIETAGPGTLVHPQYGEMQGSIDGQVRITHSSTEGRMCRVSFQFVESGELSFPVAGMATAKRLETSGGLFDDAIDSMFSTFSLSGISDFIQNDVIADAASMLGDVADAFRMVDSGVSAAMRLLQGDLSVILMPPGAASDFVNALQKAWRSGDRLRGSTSDLVTMIKTMSGITLDPGLSPRGTWPTDSGSAAKQKMQRNMIAAAIRTTAISTAVHAVTTLKQPRDVPGVRGVNQPAGTGRDSDIITVMHPALDGVQTVSNGSSPPNYEDLKAIRTALNAAIDQEQLRIRDDVLFQQISVMRTDLNRDISARLAQVERTALRTPDDVLPALVLAAAWYDDAGRESDILTRNPVPHPGFIPVEPLRVPVR
complement(2041137..2043065)       PHAGE_Salmon_ST64B_NC_004313: tail protein; STMDT2_19351; phage(gi23505460)          0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MADSFQLKAIITAVDQLSGPLKGMQRELKGFQKEMAGLAIGAAAAGTAVLGALALPVNAAIGFESKMADIRKVVDGLDDKKAFAQMSDDILTLSTQLPMAAEGIAEIVAAGGQAGIARGDLMQFANDAVKMGVAFDTTAEESGQMMAQWRTAFRLTQEDVVVLADKINYLGNTGPANAKKISDIVTRIGPLGGVAGVASGEIAAMGATIAGMGVESEIASTGIKNFMLSLTAGNSATKAQKQAMAFLKLNPRKLAEDMQKDSRGAMLKVLDSLAKVPKAKQAAVMNALFGKESLSAIAPLLTNLDLLRTNFDRVADAQEYGGSMQKEYASRAATTENQLVLLKNSVNAISVTLGDTFLPAINEAAEAVMPYLEQLRTFVRANPELVQSAAKFGAALLAVGVSIGSLSRAVKILNSVINLSPAKVAIAALVAGAMLIIENWDDVAPVIKAVWQEVDNVAQEMGGWETVIEGVGLVMAGSFTVRTIGALQQSVLLAGRLSGLLGKIGRMGAMTLTIGVAVSLFKELKDLEQGAKDAGMDAGAFAVQKLQTKERERGYNGFIPRLKELLGMDTPIPQGRYQPYVPLTRRSGVLERAVPPSTQRSELKVTFENAPQGMRVTDIPKSGNPLMNISHDVGYSPFRTSR
complement(2043150..2043476)       PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; STMDT2_19361; phage(gi23505501)     2.05e-73            SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MIKELVLKKPIMAHNEKLHVLELREPSYDEIEAIGFPFTVSGDGGVRLDSSVALKYIPVLAGIPRSSAAQLAKLDIFKACMLILNFFTRSETEEDSESGSTTPHTSGE
complement(2043473..2043829)       PHAGE_Salmon_ST64B_NC_004313: Tail tube protein; STMDT2_19371; phage(gi23505459)     2.31e-83            SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MGKIAGTTYFKIDGQQLSVTGGIEVPMNTKVRDDVIGLDGSVDYKETSRAPYTKVTAKVPKNFPVDKITSSDVMTITSELANGQVYVLSNAWLHGEANHNPEEGTVDLEFHGEEGFYQ
complement(2043829..2045325)       PHAGE_Salmon_ST64B_NC_004313: Tail Sheath protein; STMDT2_19381; phage(gi23505458)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MAISFNSIPSDTRVPLFYAEMDNSAANTARDSGASLLIGHASNDASIAVNSLVLVSSVDYARQICGAGSQLARMVGAYRKTDPFGELYVIAVPESTGAAATVALTVTGEATETGTVNVYTGRTRVQAPVTSGDDAAAVAVSIKDAVNANPDLPFTATSEAGVVTLTARHKGLYGNEIPVTLNYYGFGGGEVLPAGVNITVASGVKGAGAPALNDAVAAMGDEPFDYIGLPFNDTASVNSMATEMNDSSGRWSYVRQLYGHVYTAKTGTLSELVAAGDQFNLQHITLAGYEKDTQTPADELAASRTARAAVFIRNDPARPTQTGELVDMLPAPKGKRFTTTEQQTLLSHGVATAYVESGVLRIQRDITTYRKNAYGVADNSYLDSETLHTSAYVLRRLKSVITSKYGRHKLANDGTRFGSGQAIVTPAVIRGELGSTYRQMEREGIVENFDLFQQHLIVERNANDSNRLDVLFPPDYVNQLRVFAVLNQFRLQYSEEAA
complement(2045483..2046043)       PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; STMDT2_19391; phage(gi23505456)     1.38e-136           SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MKLTPIIAALRSRCPRFENRVGGAAQFKAIPEAGKLRLPAAYVVPAEDVTGEQKSQTDYWQDLTEGFSVIVVLSNERDEKGQWASYDAVHDVRQEIWKALLGWEPDSQVHEIQYAGGMLLDLNRHELYYQFDFTVKYEITETDTRQQDDLDGLPDLKTLSIDVDFIEPGTGPDGDIEHHTEITFQE
complement(2046040..2046558)       PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; STMDT2_19401; phage(gi23505455)     2.99e-121           SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MTMPQKAYLHVDFVQPEELVFNRARMRRAFVKIGQVHMRDARRLVMKRGRSKPGENPSYRTGQLARSIGYYVPRASKKRPGLMVKIAPNQKNGEGNRHINGAFYPAFLFYGVRRGAKRKKGHHRGASGGSGWRVEPRNNYMTEVLDKRRSWTRYVLSRELRKSLRPQRRKKK
complement(2046524..2046928)       PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; STMDT2_19411; phage(gi23505454)     9.25e-96            SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MKIRQAQTSATYLLPDPGELDQRIVIRRRVDVPADDFGVTPTYPEQIRTWAKKAQPGAAAYQGSVQIENRVTHYFTIRFRRGITADHEVLHDDISYRVKRVRDLNGKRRFLLIECEALGTDNGSDYAAESIFTR
complement(2047251..2047451)       PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; STMDT2_19431; phage(gi23505452)     9.95e-42            SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MILKQDLKWSPDGLRVEIIRAGEHDDRILPARVQEIALQTGLAECETSAKSNKAVKEKKSTTSQEG
complement(2047502..2048707)       PHAGE_Salmon_ST64B_NC_004313: Major capsid protein precursor; STMDT2_19441; phage(gi23505451)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MAVDIKDVEQVAQELQQKFDDFKAKNDKRVEAIEQEKGKLAGQVETLNGKLSELENLKSDLEKELLELKRPARGAQNKVAAEHKDAFVGFLRKGREDGLRDLERKALQVGTDEDGGYAVPEELDRSILSLLKDEVVMRQEATVITVGGSDYKKLVNLGGTASGWVGETDTRSQTATSRLGLIEPFMGEIYGNPQATQKMLDDAFFNVEAWINSELATEFAEQEEIAFTTGDGTKKPKGFLAYESTEESDKARAFGKLQHIVSGEATAVTADAIIKLIYTLRKAHRTGAKFMMNNNSLFAIRLLKDTEGNYLWRPGLELGQPSSLAGYGIAENEQMPDIAADAKAIAFGNFKRGYTIVDRIGTRILRDPYTNKPFVGFYTTKRTGGMLVDSQAIKLLKIAAA
complement(2048722..2049408)       PHAGE_Salmon_ST64B_NC_004313: Pro-head protease; STMDT2_19451; phage(gi23505450)     3.03e-165           SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MAVKPVSRRITPMQTKQRLDVPLSLKSVSDSGEFEGYGSVFGVKDSHDDVVMSGAFAASLREWSDRKALPALLWQHRMDEPIGVYTEMKEDDVGLYVKGRLLIDDDPLAKRAHAHMKAGSLTGLSIGYVLKDWEYDRSKEAFLLKEIDLWEVSLVTFPSNDEARISDVKNALARGEIPEQKKIERVLRDVGLSRTQSKAFMAGGYGALSLRDAEDVGSALNVLKNLNF
complement(2049350..2050591)       PHAGE_Salmon_ST64B_NC_004313: Portal Protein; STMDT2_19461; phage(gi23505449)        0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MFFSGLFQRKSDAPVTTPAELADAIGLSYDTYTGKQISSQRAMRLTAVFSCVRVLAESVGMLPCNLYHLNGSLKQRATGERLHKLISTHPNGYMTPQEFWELVVTCLCLRGNFYAYKVKAFGEVAELLPVDPGCVVPKLNSSWEPVYQVTFPDGSTDVLSQEDIWHVRTLTLDGLVGLNPIAYAREAISLAAATEEHGARLFSNGAVTSGVLRTEQTLSDQAYERLKKDFEERHTGLGNAHRPMILEMGLDWKSMALNAEDSQFLETRKFQLEEICRLFRVPLHMVQNTDRATFNNIEELGLGFINYSLVPYLTRIEQRINTGLVRKSKQGVFYAKFNAGALLRGDMKSRFEAYATGINWGIYSPNDCRDLEDMNPRPGGDVYLTPMNMTTKPSDGSKAGKQKDNANADETTS
complement(2050785..2052518)       PHAGE_Salmon_ST64B_NC_004313: Terminase large subunit; STMDT2_19471; phage(gi23505447)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MSRKSYPNVNAANQYARNVVRGKITACQYVIQACQRHIDDMAAEKSKRFRYRFDKDMAEKAAKFIQLLPHTKGEWAFKRMLITLEPWQLFIVCCAFGWVQKGTKLRRFREVYTEIPRKNGKSAISAGVALYCFTCDNEFGAEVYSGATTEKQAWEVFRPARLMCKRTPLLVEAFGIEVNASNLNRPEDGARFEPLIGNPGDGASPHCAIVDEYHEHPTDALYTTMLTGMGARRQPLMWAITTAGYNIEGPCYDKRREVIEMLNGSVPNNELFGVIYTVDEGDDWTDPKVLEKANPNIGVSVYRDFLLSQQQRAINNARHAGVFKTKHLNVWVAARTAFFNLVSWQNCEDKTLTLELFEGQPCVLAFDLARKLDMNSMARLFTREIDGKTHFYSVAPRFWVPYDTVYSVEKNEDRRTAERFQKWVEMGFLTVTDGAEVDYRYILEEAKAANKLNPVSESPIDPFGATGLSHDLADENLNPVTIIQNYTNMSDPMKELEAAIESGRFHHDGNPIMTWCIGNVVGKTIPGNDDVVKPIKEQAENKIDGAVALIMAVGRAMLYEKEDTLSDHIESYGIRSL
complement(2052515..2053018)       PHAGE_Salmon_ST64B_NC_004313: terminase small subunit; STMDT2_19481; phage(gi23505446)     1.48e-117           SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MPHMAGTAGRSGRRPKPTARKELAGNPGKRALNKEEPVFTPINGVSPPDWFNEEDMPLASVMWELTTKELCGQGLLCVTDLAVLERWCVAYEFWRRAVKNIAKEGNTITGAMGGKIKNPELTAKKEQESEMSSTGSMLGLDPSSRQRLIGLAGQKKTSNPFLKMINS
complement(2053135..2053485)       PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; STMDT2_19491; phage(gi23505500)     3.07e-81            SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MPPRTPKACRVRGCRSTTTDPSGYCESHRSEGWKQYKPGQSRHQRGYGTKWDVIRARVLKRDKGLCQLCLRSGVVREAKTVDHIIPKAHGGTDTDSNLQSLCWPCHKAKTARERLK
complement(2053546..2053848)       PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; STMDT2_19501; phage(gi23505499)     2.09e-69            SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MSELNYEAIGRCKILNEKIKALHAERMKAIGDLRSSVYSLHQKGDINRVPPELVEFDPQSLTDLVEKVSHYDSELMRAVHEYNNWCAEAGEKPVKLIKLD
complement(2054068..2054487)       PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; STMDT2_19511; phage(gi23505498)     6.61e-98            SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MKYPTVIVNGVSVRVDEDGRYNLNDLHAAAVANGEATESQRPSNFLRSAQIKRFISALKAKAQKRALKEIQPLKVIKGGVDSGVWGVELLAIRYAAWIKPEFEIEVYEVFKTVVRLGVGAMSRLNRIDHIINTETKAIS
complement(2054700..2055185)       PHAGE_Salmon_ST64B_NC_004313: lysis protein; STMDT2_19521; phage(gi23505497)         6.38e-114           SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MNLLPVLLKKYWLQLSVTLLIAVLAWTTDHYRDNAIQYKSQRDTASHSLTLANETISDMEVRQRDVAALDARYTKELADAKAENDALRDDVAAGRRRLLVNATCPAVSTGKSTSAARVDNAARPRLADSAQRDYFTLKERVTTMQKQLEGAQDYIRTQCLK
complement(2055182..2055796)       PHAGE_Salmon_ST64B_NC_004313: lytic enzyme (putative glycohydrolase); STMDT2_19531; phage(gi23505496)     1.43e-151           SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MNESQFQQAAGISAGLSARWYPHITAAMSEFGITAPLDQAMFIAQVGHESAGFTSLVESFNYSVDGLMKTFGKRLTPYQCEMLGRVDGKQVAHQPQIANLVYGGRMGNKDAGDGWKYRGRGLIQITGLENYTRCGVALKLDLVANPGQLELDRHAARSAAWFFVTRGCLKYSGDLVRVTQIINGGQNGIGDRRERFEKAKSVLV
complement(2055799..2056143)       PHAGE_Salmon_ST64B_NC_004313: lysis protein (holin); STMDT2_19541; phage(gi23505495)     1.43e-56            SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MKMHFDPHSWDSWIELFQSWWRGDVPIGGVVMAIVVAFFRMVYNGSSWKETLFEGLLCGSLTLTAVSALDYFDVPKSLTIAIGGTIGFIGVKKISTIISTYFSNRFGGGNPPQV
complement(2056669..2057028)       PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; STMDT2_19551; phage(gi23505494)     4.29e-83            SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MLGKAAPRWQRRKASQLKLRNLAFAGFLRFWEPVMQDGKQQPYFFNPGMTPEQLEDWLGQQKLHLTYYNQLVNEKAALEERLNEISAEIERMSAGGFKGKLSFLWDPSPLPRNRQQNND
complement(2057059..2057682)       PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; STMDT2_19561; phage(gi23505493)     8.69e-153           SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MTPRQRRQHRNAIEKAAAAPRKSWLGKFRPLTSVQSAWVKSLLSVWGECYGGRTSEEAMLDCCGFWSCLQDEEWTDNEAKRITETIKGLRKIGYKGEALLSMARQILWPKQSIADLLNKEMRIEESDFVERCILSALSKDDPVFVVGIDFYARRKRVSDIGRYLQEIAPWLTRKQAEDRVRWCVNHFNCAVFLAFRDAMRKQNEKIS
complement(2057693..2058688)       PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; STMDT2_19571; phage(gi100127)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MIVRALLTPEIAPRMGVVLFRPGAELMPLFMQGRVLLEPEPEQYSSFACGAVPAVSQPLADDPAVRDVFRNESVIYRAGGLDSLESWLLRGNGCQWPHSDWHSEQMTTMRHAPGAIRLCWHCDNLLREQFTERLKSIAVENTTKWVLSVVCRDLGFDDMHAVTLPELCWWMVRNDLAEVLPESAARKALRMPKAIVQSATRESEIVPSVPATSIVQDKAKKVLALRVDPESPESFMLRPKRRRWVNERYTRWVKSQPCACCGKQADDPHHLIGHGQGGMGTKAHDLFVLPLCRTHHNELHADTVAFEEKYGSQLELIFRFIDRALAIGVLS
complement(2058690..2059595)       PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; STMDT2_19581; phage(gi23505490)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MKQGRVQPTENGERSMNNLMVIDGIEVRRDVHGRYCLNDLHRAAGGEQKYRPKYWLDNKQTRELIEQLFTEGGIPPSEQNQSVSFFQGGSDTQNLGIAPVNTVRGGAEQGTYVCKELVFAYAMWISPSFHLKVIRTFDRITSAPQTSSGMAADKMQAGVILLGFMRKELNLSNSSVLGACQKLQEAVGLPNLAPQYAIDAPAGALDGSSRPTLALSALLKQHGIRMTANQAYQQLAKLGVVEHRERYSRSAINGIKKFWSLTAKGCMFGKNITSPANPRETQPHFFESKFPELLKLLDTVH
complement(2059953..2060846)       PHAGE_Salmon_ST64B_NC_004313: putative DNA methyltransferase; STMDT2_19591; phage(gi23505488)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MSNKYCQALAELRNKSAHELKEVGDQWRTPDLLFWGINAMFGPLTLDLFADDDNAKCPVWYTADDNALVQDWAEMLESIGGAAFGNPPYSRSQYHEKQAITGMTHIMDHTMEMREKGGRYVFLVKAATSETWWPEDADHIMFIRGRIGFDLPVWFVPADDKQKTTGAFFAGAIAIFDKSWRGERFSYISRTELEEKGKAFMSLVEFAAGKVQPPATTAPEQEEPIIAPAVLPYVDSRIWPLEVGLVFNQVEGADSLDASQQNKLKANINQLWLERMPTSEIITTAGGLVSSMRREVA
complement(2060846..2061463)       PHAGE_Salmon_ST64B_NC_004313: putative transcriptional activator; STMDT2_19601; phage(gi23505487)     3.93e-127           SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MVPIVILGSYGLFLLHLVLDVKIRCSNPATGMWITARSRQGSGGDMSLMGDVQKFIESHPGCTSSDIANAFADFPRKSVLQSTSELRQCRRVAHRFEGKTRRHFALETDIQPDQEPDIGTKPVRSCYVGTNDPQVIMHLIRQAETLESGGLFRRAATVWMEAFRESHIPSERSAFLARRERCLRKSRKSVASGSEWYLSGNYVGS
complement(2061330..2062148)       PHAGE_Salmon_ST64B_NC_004313: putative replication protein; STMDT2_19611; phage(gi23505486)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MSMELMVKAMKIRVGNPLRKLVLIKLADNASDQGECWPSYQHIADQCEISKRSVMNHIAALCESGLVKKVTRKGEKGNSSNIYLLHLDGAGDSLGGSANNSLPGAANSLGSAGVAPGGSEGDSPRTSHSFEPVKEPVNESKTIGASAYASSSVCFARQEYSPEFEQAWLAYPKRAGGNSKSAAYKAWKARLKEGVNAETMLEGVKRYAGWVSATGNSGTQFVKQATTFFGPDRHFGELWAVPAAPSPGREDPMFKSSYGNVDYSQIPTGFRG
complement(2062366..2063574)       PHAGE_Salmon_ST64B_NC_004313: putative antirepressor; STMDT2_19621; phage(gi23505485)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MCSSGRRGVKFYGENQRMNSLTVNNRLSQQPGMYEYRPLRHECRLPNSLVVRNHREHSLTVGDESCRNLTAGFGMEGDFMSMSFAGNQKLSALSICARAIRMSVLALCGNSGVILLSVKRQEHIDSAIPGRYTVQAPHKAGAGRGNPEFNIEHNRAHAVFSCHEHCYAQIMVGRAGPVSAGPGSMLTGISTPVRLTTYKVVESLGGEFIEFNIEAATMATVPTLAQPEIRIINGQAVTSSLAVADYFIKRHADVIRKIESLECSTLFRQRNFAFTSISINQPNGGTRKLPCYQITRDGFAFLAMGFTGKRAAQFKEAYINAFNQMEKQLSIPSVLSDAAHNASVLYSYISSIHQVWLQQLYPMLEKAESPLAVSLYDRINDAVALASLINMTLNRSEVRGRK
complement(2063520..2064230)       PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; STMDT2_19631; phage(gi100118)     7.70e-134           SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MKDASRLLQQSLLSAWLNFTPEKLARCKFCIQTDISLVIRRFDRHHCRRSRSVGHEPEWKVEKQPRWLVAAIKKTISSLHGGYEEAAEWLDVTKDALFNRLRTGGDQIFPIGWALVLQRAGGTYHLAHSVARASGGVFVPLADMEEVDNADINQRLLEAIEQITSYSQQIRVAIEDGVIEPHEKAVIDEELYQAIAKLQQHSTLVYRVFCAPEKGDARECAAPGAVASNFMEKTNA
2064425..2065120                   PHAGE_Salmon_ST64B_NC_004313: regulatory protein; STMDT2_19641; phage(gi23505482)     4.81e-170           SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MNIGNRVRQLRRAKNMKIAELAEAIGVDAANISRLETGKQKQFTEQTLSRLADCLGVDIAELFTSDPKGNTVCKHSDMRKDSANVKDLFRIEILDVSASAGNGLIQGGDVIDVIHAIEYNKDKALAMFGGRPAAELKVINVRGDSMAPTIEPGDLIFVDISINQFDGDGIYVFGFDDKIYVKRLQMIPDKLLVISDNTNYREWSITKDNECRFGVFGKVLISQTQSLKRHN
2065716..2066306                   PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; STMDT2_19651; phage(gi23505481)     2.48e-85            SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MLCEVLSASGSSNNRRKATVFCRDADLFTQQKRVSPRDGLITQSTRKAVTAGALFCFVEKPTGGGNRHLEGLTMNDDRMTVVPDFLGELDAGVFMNKIAAALNTVGLGVLNNGNKGKVVLTFDFERMGNSVEEKRVKIKHKLQYSTPTPRGKASEEDTTETPMWVNKGGKLTILQEDQGQLFSIKGTTDGKLKAAQ
2066364..2067191                   PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; STMDT2_19661; phage(gi23505480)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MSQLDSGTFQQVKDLVLSGYHLNDIQGLACPTALLPAGTGVESLERFALERFRFRGAMTTTSIEDFVRYSKGYASTTEKARCFIDADHMTARSVFNIGTLDNPGHADNVASVTLKQTAPFRALLQINGERLKQKQIAEWLEDWSDYLLAFDSDGKTMQISQAAQAVRRITIQQATQQDHEDGDFSGKKSLMQSIEASSKDVMPVAFEFKCVPYEGLGERAFSLRNSLLTGDEPRFVLRIVQLEAQEEAIANEFRDLLISKFDGESVETFIGNFKA
2067328..2067867                   PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; STMDT2_19671; phage(gi23505479)     2.57e-129           SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MSFIQTLSGKQFDYLSATIDDIDIEDIAVALSNICRFSGHLPEFYSVAQHSVLCSQLVSPEFAFEALMHDAAEAYCQDIPAPLKALLPDYREIEKRTDQLIRFKFGLPLEEASVVKYADLTMLATERRDLDIDDSIPWVILEGIPPTDLFEIYPLRPGQAFGLFMARFNELMELRQCAA
2068165..2068680                   PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; STMDT2_19681; phage(gi23505477)     1.40e-126           SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MSNRIRNAQVFDARTGEYPVYMYIHWIIGGELDFDANYQRGYVWGHEEQQAFLNAVISGFPIGSVALAKAPDWCSRELPYIEVVDGKQRLTTLKKFITNEIPIILADGPLYWRDMTRAEQLVFGRRPLPAVVLDEVTYKDRLAYFMVVNFTGVPQSEEHKRHVMQLMEAAQ
2068677..2069294                   PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; STMDT2_19691; phage(gi23505476)     1.91e-152           SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MSNIDKQALRERYSPKPAPECHICGAEMTIQRMSASRITYGCTGATYDDKGCHYAEGRSIADDHYEQSRVTVVDVSDPNVLALLDELDSANGYVSAYEAEKWHYHGLAESEGERADRAEKRVAELEYIATDYGVKFQKTQDALKHQALLHKSQMEAAEKQVEELTMWVKRLANSLRNTKPNSKLYGAAMDYLSRKGLISVEDVLR
2069291..2070124                   PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; STMDT2_19701; phage(gi23505475)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MTTITKEWLQQTIAEFENTRDDIPFGLDDDDAKILLVLKRALASLDAEPVRYLNKFSGTCVTLEQQSNAADDVAVYIPLYTAPPAPVVPEEAYSDDCPDLYASQPEAWAAGWNACRAALLHGAEPVSQTYELPQTQFEQVADLYEMQFDDGRTCAFHTDGAKAAQWLLACDGNKVQEYVRLERYHEALIGNSPVIPDDWVMVPKKLTAENGAKSLLSGEFLETTFISFPECLADEECESCDGSGRIKIEVPVRWTTIKAIWNKGVEHFRSSTATGDN
2070128..2070697                   PHAGE_Salmon_ST64B_NC_004313: Endodeoxyribonuclease; STMDT2_19711; phage(gi23505474)     1.05e-140           SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MNNLMIDLETMGKKPNAPVVSIGAVFFDPQSGEIGPEFYTAVSLESAMEQGAVPDGDTILWWLRQSPEARAAICADAVSVTTALIEFNDFITCHADDLKYLKVWGNGANFDNVILRGAFERASLPCLWNYRNDHDVRTMVTLGRAIGFDPKRDMPFEGDMHNALADARHQAKYVSAIWQKLIPPTSNNI
2070722..2070964                   PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; STMDT2_19721; phage(gi23505473)     6.59e-55            SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MEKQLMSDRFLTEEELEDATGASQKSLQKEVLTLNGIYFIERRDGSIRTTWYHINHPVSRLLPPAGYQPVPGMNFDAIES
2070966..2071955                   PHAGE_Salmon_ST64B_NC_004313: Integrase protein; STMDT2_19731; phage(gi23505472)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MGRKRAPGNEWMPKGVFFRPSGYYWKPGGSTENIAPADATKAEVWVAYEKKVEGRKNRITFTQLWRKFLASADYADLAPRTQKDYLAHEKYILAVFGDAEAKAIKPEHIRRYMDARGQKSRVQANHEHSSMSRVFRWSYQRGYVPGNPCVGVDKSPKPQRDRYITDEEYRAIYNNATPAVRAAMEIAYLCAARVSDVLKMNWNQILEKGIFIQQGKTGVKQIKSWTDRLRDAVEICREWGEEGPVIRTMYGERYSYKGFNEAWRKARKAAGDDLGRPLDCTFHDLKAKGISDYEGTAKDKQKYSGHKTESQVLVYDRKVKMSPTLDRKR
complement(2072072..2072158)       tRNA                                                                                 N/A                 GGAGAGATGCCGGAGCGGCTGAACGGACCGGTCTCGAAAACCGTTGCGGGGGTAACTCCGCCGAGGGTTCGAATCCCTCTCTCTCCG
2072116..2072130                   attR                                                                                 N/A                 CGGTTTTCGAGACCG
2072247..2073044                   hypothetical protein; STMDT2_19741                                                   N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MIKWPWKAQEITQNEDWPWDDALAIPLLVNLTAQEQARLIALAERFLQQKRLVALQGFELDSLKSARIALIFCLPILELGIEWLDGFHEVLIYPAPFVVDGEWEDDIGLVHSQRVVQSGQSWQQGPIILNWLDIQDSFDASGFNLIIHEVAHKLDMRNGDRASGIPFIPLRDVAGWEHDLHAAMNNIQDEIDLVGESAASIDAYAATDPAECFAVLSEYFFSAPELFAPRFPALWQRFCQFYRQDPSQRLRVSAAEGDYGEESEH
2073143..2073220                   attL                                                                                 N/A                 ATTCCTCTGTAGTTCAGTCGGTAGAACGGCGGACTGTTAATCCGTATGTCACTGGTTCGAGTCCAGTCAGAGGAGCCA
2073145..2073217                   tRNA                                                                                 N/A                 TCCTCTGTAGTTCAGTCGGTAGAACGGCGGACTGTTAATCCGTATGTCACTGGTTCGAGTCCAGTCAGAGGAG
2073416..2073706                   PROPHAGE_Escher_Sakai: putative integrase; STMDT2_19751; phage(gi15834507)           3.32e-14            SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MPDQRKRPSSSLTGLASIDSKYWQSGYRFNGKQKVFSIGVYPAVSLADARQRRDEVKRLLDQGIDPNAKNRLMKKSFRKSAIKPARPVSSPKADAP
2074113..2074190                   attR                                                                                 N/A                 ATTCCTCTGTAGTTCAGTCGGTAGAACGGCGGACTGTTAATCCGTATGTCACTGGTTCGAGTCCAGTCAGAGGAGCCA
2074115..2074187                   tRNA                                                                                 N/A                 TCCTCTGTAGTTCAGTCGGTAGAACGGCGGACTGTTAATCCGTATGTCACTGGTTCGAGTCCAGTCAGAGGAG
2074354..2074827                   PHAGE_Escher_phiV10_NC_007804: putative protease; STMDT2_19761; phage(gi89152430)     9.11e-53            SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MALTDTAGGTQTDPGTGKPSENPPAAPNKPTPPKEETPPGAPEKYAFTAPEGQELDTSALAQFEPVARELNLTQEQAQKLVDVYPKVLAGVQQQQAESWQKQTEDWAAAVKADKDIGGDKLASNLGAAQRAIDTFGTKELKEYLDGTCARSLVNAAP
2074918..2075190                   hypothetical protein; STMDT2_19771                                                   N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MTVNLRQNPRSFAPGTQPVRHFRRAKRQSDAQPLHRAMPLFSGFRRSFPNLTRLFGAAVSKKEEKKIDTEGGADAPENFCSRRQPVPRTV
2075275..2076000                   PROPHAGE_Salmon_LT2: integrase; STMDT2_19781; phage(gi16766072)                      6.17e-45            SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MFSKSQEKCMGKLGGEMKALAKHCGGSHKTVNDCIHIVQRFDHHLRALNVHIQRVAQIKVRHIESYIHERLAQGIGKRTLQNEMASLRAVLQQAGRKQVAEHEWLTNKSLGLAGASRSGTRQAITPEHYHHVLETARMKAPGLAAALELARLMGLRSQEAVQSVQWIWGMGTGVGGMWRRCMGKFDSWLRASSGWSRLPPFTVSERLGGGGKYQAALPSPLQSKPESDRTNVEINERTCPE
2084050..2084061                   attR                                                                                 N/A                 CTAAAATCTGGC

#### region 5 ####
2719604..2721073                   PHAGE_Phage_Gifsy_1_NC_010392: leucine-rich repeat protein; STMDT2_25451; phage(gi169257209)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MKIGFQPAILQYAYTSNEATSNLELLNKWRIESPDIEKEERNSIYDKIIEANHTGSLSITAHHVTSIPVFPDNLSELNLSSCYTLESIPNLPDGLKSLTISGNQTIKISYFPDSLESLSIDMQAYEENYTFPALPYGLKSFTACYGKFLPPLPPHLSSLSLQNFSEILCAELPYKLDKLDLQNCPFLPLMKMLPEELKELSIELIRTVPGTVIDDILPDKLKKLSINFCDNIKLPVKLPVNLKSINLSSRTPIAWEIPTCNLPAHIDISTDGYVKLNPEFLTRSDITFSNKPAGDVLSFQPGDVVYGLCKARDRVNTLVNSLYYFSKKDIIIQNTLTDAVWDRKNRAVFNKDEKIAERLNDVQRGIFFREFLSQHKKYNITEDKYSDLSNEECWIKTSKAGLEFQTRLRERSVIFVIDNLVDAISDIANKTGKHGNSITAHELRWVYRNRHDDLVKQNVKFFLNGEAISHEDVFSLVGWDKYKPKNRNR
2721918..2722463                   PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; STMDT2_25461; phage(gi169257210)     4.95e-133           SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MMRFVYIYILVIYGSYLWFSLGGNMFTINSTNRVASTIAPYACVSDVNLEDKATFLDEHTSIHANDSSLQCFVLNDQHVPQNTLATDVEGYNRGLQERISLEYQPLESIVFLLGTPAVLETKESLSLPVSPDALTQKLLSISSNDECKLSGSTSCTTPASHNPPSGYIAQYRHSAEVFPDE
complement(2723128..2723193)       putative prophage protein; STMDT2_25471                                              N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MKREILSLRYTTRYSELLRVK
2723575..2723802                   PHAGE_Phage_Gifsy_1_NC_010392: PagK-like protein; STMDT2_25481; phage(gi169257211)     6.87e-51            SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MPKFNRQRIIKHVKSVFLAMILILPSSLYSALTIAADSQDHKKEETIKPMPQKWCNLWPAGIPFPEDWFKMCRGY
complement(2723899..2724477)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage side tail fiber assembly factor & structural component; Lambda gpTfa homolog; STMDT2_25491; phage(gi169257212)     5.79e-141           SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MTFKMSDTPQTIKIFNLRSDTNEFIGAGDAYIPPHTGLPANCTDIAPPDIPASHIAIFDAETGTWSLHEDHRGETVYDTTTGNQVYISAPGPLPENVTSVSPDGEYQKWDGKAWVKDEAAETAARLREAEGTKSRLLQMASEKIAPLQDAVDLDEATDKEKASLLAWRKYRVQVNRVDTLKPVWPEKPASSL
complement(2724467..2725291)       PHAGE_Phage_Gifsy_1_NC_010392: conserved hypothetical protein; contains pfam01661, Macro, Macro domain; STMDT2_25501; phage(gi169257213)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MIKLILSAPVPAMAVAFEHSFQNTENVEIIPGPFETIPEFDCMVSAANSFGLMDGGVDAAITAYFGPQLQERVQQHILREYLGEQPVGTAFVIETGNSKYPWLVHAPTMRVPLIIDGTDAVYNATRAALLAIFQHNKSAGEDRKIKSVVFPAMGAGCGQVSPGSVARQMKLAWDGFINCTTEINWQYASARQNAVFSTTAYCPSKALCPNARTEYIGFGDYRTYCKKSGNTCISPRHQVDDIYIGAHSHAVFLSPNSHGKHLKPEYLSGVKNDV
complement(2725288..2727660)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage side tail fiber protein; Lambda gpSft (gpN) homolog; STMDT2_25511; phage(gi169257214)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MPVLISGVLKDGTGTPVQNCTIQLKACRTSTTVVVNTVASENPDDAGRYSMDVEQGQYTVTLLVEGYPPSHAGVITVYDDSKPGTLNDFLGAMTGDDVRPEALRRFEAMVEEVARQASEASRNATAAGQASEQAQTSAGQAAESATAAVNAAGAAEASATQAASSAASAESSAGTATTKAGEASASAASADTARTAAAASAAAAKTSEANADVSRTAAGDSAAAAAASATAAQTSAARAGASETAAKTSETQAASSAGDAGASATAAAASEKAAAASAAAAKISETNAATSASTAAASATAASSSASEASNHAAASDTSASLAAQSSTAAGAAATRAEDAAKRAEDIADVISLEDASLTKKGIVKLSSATDSDSEALAATPKAVHAVMDEVQTKAPLDSPVFTGTPTTPTPPDDAKGLQTANAEFVRKLIAALVGSVPESLDTLQELADALGNDPNFATTITNMIAGKQPLDDTLTALSGKSIEGLIEYVGLRSTIDKAAGALPAGGTAVAANRLASRGALPALTGTTRGSDGGLIMGEVYNNGYPTQYGNILRLTGTGDGEILIGWSGTNGAPAPAYIRSHRDTADAEWSEWAMLYTTLNPPPDSHPVGAAIAWPSDATPAGYALMQGQSFDKSAYPLLAIAYPSGVIPDMRGWTIKGKPISGRAVLSQEMDGNKSHSHTARAQDTDLGTKSTSSFDYGTKSTNTTGNHTHQFGGYINSYWGDSNHTSFQPGGGAWTQAAGDHAHTVYIGGHEHTMYIGPHGHVVIVDADGNAETTVKNIAFNYIVRLA
complement(2727995..2731357)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage host specificity protein; tail fiber; Lambda gpJ homolog; STMDT2_25521; phage(gi169257216)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MGKGGGKGHTPREAPDNLKSTQLLSVIDAISEGPIEGPVNGLQSVLVNQTPVVDRDGNTNIHGVKVVYRVGEQEQTPLEGFESSGAETVLGVQVKYDNPVTRTITAANIDRLRFTFGVQSLVEANSKGDRNPTSVRLQIHLERYGQWVVEKEITITGKTTTQYLASVIVDNLPPRPFGIRMVRVTADSTTDQLQNNTVWSSYTEIIDVRQRYPNTAVIGLQVESEQFGSQQVTRNYHFFGRIIHVPSNYDPVARTYSGIWDGTFKPAYSNNPAWCLWDVLTHPRYGMGQRIGAADVDRWALYAIGQYCDQMVPDGFGGTEPRMTFNAYLAQQRKAWDVLTDFCSAMRCMPVWNGQMMTFVQDRPSDTVWTYTRSNVVMPDEGTPFRYSFSARKDRHNAVEVNWIDPDNGWQTSTELVEDTVAISHYGRNLVKMDAFGCTSRGQAHRAGLWLIKTELLETQTVDFSVGAEGLRHVPGDVIEVCDEDYAGISLGGRILSVDRARRILTLDREITLPSSGTTLISLMDGEGLPVSVDVQSVTDGVQVQVSRIPDGVAEYSVWGLKLPSLRQRLFRCVAVRENDDGTYAITAVQHVPEKESIVDNGASFDPQPGTIHGTVPPAIQHLTTEILAEEGQYQVLARWDTPRVVKGASFSLRLNVAAEDGSDRLVSSAGTPDTQYRFRGLTPGRYTLSVRAVNSQGQQGDPASTQFSISAPAAPSFIELTPGYFQITATPRQAVYDPTVQYEFWFSDAQITDIHQVENAARYLGTALYWIAASVNIRPGRDYYFYIRAVNQVGKSAFVEATGQASNDAAGYLDFFKGQITESHLGKELLEKVELTEDNASKLQQFSKEWQDANDKWNAMWGVKIEQTKDGKYYVAGPGLSMEDMPDGKISQFLVAADRIAYINPANGNETPGFVMQGDQIIMNEAFLKYLSAPTITSGGNPPAFSLTPDGKLTAKNADISGHINAVSGSFTGEINATSGKFSGVIEAREFVGDICGSKVMQGVSIRETNDERSTSTRYTDGATYQIGKTITVMANCERNGGSGAITVTININGQVKTAEVIPYTAGLPAMYQTVVFSVYTTSPVVDISVSLRVRGQYTTSASVWPLVMVSRSGNNFTN
complement(2731419..2732066)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail tip assembly protein; Lambda gpI homolog; STMDT2_25531; phage(gi169257217)     6.47e-156           SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MATTHALHLATPGMARICLYGDLQRFCRRVSLQVASGAEAVRALAVQLPGLRQKLNDGWYQVRIAGDDVTADTLTTSLHDPLPPGAVIHIVPRLGGAKSGGVFQAVLGAALIAVAWWNPAGWLGAAAVSGMYMTGASMVLGGVAQMLAPKPKMSEMRQTDNGRQNTYFSSLDNMVANGNTLPVLYGEMQVGSRVISQEVSTADEGDGGQVVVIGR
complement(2732707..2733408)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail tip assembly protein; Lambda gpL homolog; STMDT2_25551; phage(gi169257219)     2.92e-174           SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MMQDISQDTLNESAKLAQSARITLWEIDLTQSGGDRYFFCNEANEKGEAVTWQGRKYDVYPVDGCGFEMNGKGAAARPSLKVSNLYGMVTGMVEDLHSLVGATVIRRIVYARFLDAVNFQNGNQEADPEQESVSRWVIEQCSDLTAVSATFVLATPTETDGCVFPGRIMLANTCTWIYRSDECGYTGPAVADEFDNPTADPAKDACSRCARGCALRNNTGNFGGFLSINKLSQ
complement(2733415..2733744)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail tip assembly protein; Lambda gpM homolog; STMDT2_25561; phage(gi169257220)     6.65e-77            SalmonellaentericasubspentericaserovarTyphimuriumstrDT2METFNWKIRPDMTVESEPKVTSIKLGDGYEQRRPAGLNNHLAKYNVTVRIRKGEHQNLEAFLSRHGGVKSFLWTPPYTWTQIRVICRKWSINVGSLWVTVTTTFEQVVI
complement(2733747..2736842)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail tape measure protein; minor tail protein; Lambda gpH homolog; STMDT2_25571; phage(gi169257221)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MDQIANLVIDLSIDSAEFRNEVPRIKKLLNDAAGDSERSAARMQRFLDKQTEATRRTSASLEQVTASSTAYSSAVEKSAAASTRLAADVDQTRQRVEALGRKLREEQAQSAAVAAAQDRTSAAFYRQIDSVKQLSGGLQELQRIQAQVRQAKGRGDISQGDYLALVSETARKTRELTDAEALATQKKAQFIRRLKEQTTVQGLSRTELLRVKAAELGVSSAADIYIRKLERTGTATHTLGLKSAAARRELGVLAGELARGNFGALRGSGITLANRAGWIEQLMSPKGMMLGGLAGGVAAAVYGLGKAYYEGAKESETFNKQLILTGSYAGKTTGQLNAMAKSLAGNGVTQHDAAGVLAQVVGSGAFTGQAMAMVSRTATRMQENVGQSVDETIRQFKRLRDDPVNAAKELDRTLHFLTATQLEQIRVLGEQGRVADAAKIAMSAYSEEMNKRMGDVHDNLGWIERAWNAVGDAAKWAWDRMLDIGREDTLDEKIATLQEKIARDRKTPWTVSSSQTEYDQQQLNELQEQKRQKDLLDAKAQAERNYQETQKRRNEQNAALNRDNETESLRHQREVARITAMQYADAAVRNAALERENERHKKALSQQAKKPKTYHNDEARRLLLQYSQQQAQTEGQITAAKLSTTEKMTEAHKQLLSFQQRIADLSGKKLTADEQSVLAHKDEIALALQKLDISQQDLQHQNALNELKKKTLTLTSQLADEESRVRQQHAMALATMGMGDQQRGRYEERLKIQQHYQEQLEQLKRDSKAKGTYGSDEYRQAEQALKGSLDRRLAEWADYNAKVDAAQGDWTLGASRALDNFLAQGGNVAGMTENVFTNAFNGMADSIANFAVTGKGSFRSLTVSILADLAKMEARIAASKLLGSVLAMFGFGTSAGGSTPSGAYSSAALSVIPNADGGVYRSAGLSQYSGSIVNRPTFFAFAKGAGVMGEAGPEAILPLRRGADGKLGVVAAGSGGMAMFAPEYNIEIHNDAGNGQIGPQALQAVYNIGKKAAIDFWQQQSRDGGIAGGGR
complement(2736814..2737131)       PHAGE_Phage_Gifsy_1_NC_010392: part of bacteriophage tail assembly chaperone gpG by translational frameshifting; Lambda gpT homolog; STMDT2_25581; phage(gi169257222)     1.67e-71            SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MMRLAREFRRPDWRQMLAEMSATELGEWAEHFGKNSFSDMLLDAEFATLKSLISGLVTGTHHDAEMFSLITDPESLHEKTDDELMILGEGITGGVRYGPDSEPGH
complement(2737149..2737544)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail assembly chaperone; Lambda gpG homolog; STMDT2_25591; phage(gi169257223)     2.51e-93            SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MFLNTDTFNYGGHSIVLSELSALQRVDYLKFIQQRTADYDAQPETLTEAERQTEFMQMGVDINAWLVSRSLCESKKEEEARALYESVRLEWSYEALGRGADMVLSLSGMRLPASQEDDSGSEKDTTTPEKS
complement(2737595..2738341)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage major tail subunit; Lambda gpV homolog; STMDT2_25601; phage(gi169257224)     3.70e-174           SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MMGTPNPLVKTKGAGTTFWLYTGSGDAFKNPLADDDWLRLAGIKDLQPGEMSADAEDDDYLDDENADWKSTTQGQKSVGDTTATLAWKPGETGQKKLVELFDTGEVRAFRIRYPNGTVDVFRGWLSSLGKTVTSKEVMTRSVKITGVGRPSLAEEDTPDVVSVSGVTVAPASATVAAGATTTLTFTVKPDNASDKTLQVATADPLIATVTLKDNVATVKGVKAGSVNIVGISSDGSLVAVAAVTVTAS
complement(2738349..2738750)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail shaft stabilization protein; Lambda gpU homolog; STMDT2_25611; phage(gi169257225)     2.90e-93            SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MSKHTLIRRAVLEKLESVTGAPVTLFDGLPAFVEQEDLPAIAVWLTDAQYTGLMTDEDDWQATLHTAVFLRAQAPDTELDIWMEEKIFPALEEVSGLERLIDTMTPLGYDYQRDSEMATWGMAEITYRITYTN
2738739..2739989                   PHAGE_Phage_Gifsy_1_NC_010392: transposase; STMDT2_25621; phage(gi169257226)         0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MFAHQNASFPPRPEGRGGKEAVFRLTVFCIITFSSLICEAMKRAYKYRFYPTTEQAELLAQTFGCVRFVYNSILRWRTDAYYERKEKIGYLQANARLTALKKEPEFAWLNDVSCVPLQQSLRHQQTAFANFFAGRAAYPAFKSKRHKQAAEFTASAFKYRDGKLYMAKNKIPLDVRWSRPLPSVPSTVTISKDAAGRYFVSCLCEFEPASLPITSSMVGIDVGLKDLFVTDTGFRSGNPRHTAKYAARLALLQRRLSKKAKGSKNRAKAHLKVARLHAKIADCRLDALHKATRKLINDNQVVCVESLKVRNMIRNPSLSKAIADASWGELVRQLRYKGEWAGRSVVAIDQFFPSSKRCSCCGFIMKKMPLDVRKWQCPECGTDHDRDVNAARNIKAAGLAVLAHGEPVNPESLKAA
complement(2740038..2740616)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage head-tail assembly protein; Lambda gpZ homolog; STMDT2_25631; phage(gi169257227)     1.05e-135           SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MKGLENAIRNLNSLDRQMVPRASIWAVNRVAQKAVSVATRKVARETVAGDNQVRGLPLKLVRQRVRLFKAGTDGKRSARIRINRGNLPAIKLGAAQVRMSKRRGKLLYRGSVLKIGPYLFRDAFIQQLANGRWHVMRRVNGKNRYPIDVVKIPLSGPLTQAFESATQSLIDEEIPKQLGYALKQQLRLYLSR
complement(2740644..2741027)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage minor capsid protein; forms tail attachment site on head; Lambda FII homolog; STMDT2_25641; phage(gi169257228)     6.78e-87            SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MSQSENLFDTAISQADDAILRVMGTVATITSGVLAGATLTGVFDDPESVSYAAGGVRIEGDKPTFFVKTSLTVHLKRPDTLTILGDTFWVDRITPAGGDSSIILLGRGTPPTDNRRRTGGMFDCSPA
complement(2741038..2741397)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage accessory DNA packaging protein; Lambda FI homolog; STMDT2_25651; phage(gi169257229)     7.18e-80            SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MATKEENIQRLRELATRLGRDPDVSGSAAELSQRVMEWEEEAEAEHLPAVENDSDESIVPPGIGQRSERVLIRALRTLHICAIDPDSNRELDMVMAGNPARISQHDVDELIAAGLIIEL
complement(2741455..2742483)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage major capsid protein; Lambda gpE homolog; STMDT2_25661; phage(gi169257230)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MGLFTTRQLLGYTEQKVKFNPLFLSLFFRRTVTFPTQEVMLDKITGKTPIAAYVSPVVGGKVLRNRGGETRVLRPGYVKPKHEVNYAQVVERLPGEDPARLNDPAYRRLRILTDNLKQEEKAIVQVEEMQAVSAVLNGKYTMQGEQFDTVEVDFGRSAGNNIIQATGKKWSEQDRETFDPTYDLDMYCDQASGLINIAVMDGKVWRLLNGFKLFREKLDTRRGSNSQLETAVKDLGAVVSFKGYYGDLAIVVAKTSYVADNGTEKRYLPEGTLVLGNTAAEGIRCYGAIQDSQALAEGIVAATRYPKHWLTVGDPANEYTMTQSAPLMVLPDPDEFVIVTVG
complement(2742538..2742885)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage head decoration protein; Lambda gpD homolog; STMDT2_25671; phage(gi169257231)     2.53e-78            SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MSFTTTIEKRADNRIFAGNDPAHTATGVSGITAATPMLTPLMLDDTTGKLVAWDGQKAGTAVGVLALELDGSENLLTYWKSGTFATESLAWPKSVDAIKQANAFAGSAVSHAALP
complement(2742898..2744346)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage prohead protease; Lambda gpC homolog; STMDT2_25681; phage(gi169257232)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MLLEPAYARVFFCALGRESGINSLHIPGNNESLDQSDMALVTGDFMATGKPQARFYQVVNGIAVLPVTGTLVHKLGGMRPFSGMTGYDGVTARLQQAVSDPEVKGILLDIDSPGGQAAGAFDCADMIYRMREQKPVWALANETACSAAMLLAAACSHRLVTQTSRMGSIGVVMAHTSYAEKLKQEGIDITLIYSGAHKADLTPSQKLPESVYADYQQRMDEARKMFAEKVARYTGLSVDAVMATEAAVYDGQAIITTGLADGMVNAADAIGVMAEAINSNKTGGTMPELSAADAVTQENQRVMGILGCPEARGHEALAQMLAGQPGMSVAQAKSILAAAAPADTTSTADRILALEEAGGRETLAQTLAAMPEMTVEQARTILAASPIAAATSLHDAVMALDEAKGREELAEKLAVMPGMTTDQARDLLAAAPDKSGNAGLSMNNAFDAFMQSHSPGPISGGKGHSNDTETTLLMSIPGTSAT
complement(2744384..2745964)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage portal protein; Lambda gpB homolog; STMDT2_25691; phage(gi169257233)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MKRTPVLVDVHGTPLRESLGYTGGGIGFGGQMADWMPPAESVDAALLPSLRLGNARADDLVRNNGIAANAVALHKDHIVGHLFLISYRPNWRYLGMRESAAKSFVDEVEAAWTEYCDGIFGEMDAEGKRTFTEFIREGVGVHAFNGEIFLQPVWDAETTQVFRTRFKAVSPKRVDTPGYARGNRQLRAGVETDRNGKALAYHVCDDDWPVAGGERWTRIPRFLPSGRPAMLHIFEPVEDGQTRGANQFYSVMERLKMLDTLQATQLQSAIVKAMYAATIESELDSEKAFEYITAADNKDTPLVNMLANYARYYSTNSIKLGGVKIPHLYPGDELNLQTAQDSDNGFSALEQALLRYIAAGLGVSYEQLSRDYSQVSYSSARASANESWRYFLGRRRFIAGRLATQMFSCWLEEALIRGVIRAPRARFSFWEARSSWSRSEWIGAGRMAIDGLKEVQESVMRIEAGLSTYEKELAIMGEDYQEIFRQQVRESEERRAAGLSRPVWITDTYQQQIAASRQTEEEKRAT
complement(2745961..2746164)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage head-to-tail joining protein; adapter between portal and gpFII; Lambda gpW homolog; STMDT2_25701; phage(gi169257234)     4.65e-42            SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MATITELQEARVALHDLMTGKRVATVQKDGRRVEFTATSVGDLKKYVAELEASLCNGRRRAPVGVRL
complement(2746148..2748079)       PHAGE_Phage_Gifsy_1_NC_010392: DNA packaging protein; large terminase subunit; Lambda gpA homolog; STMDT2_25711; phage(gi169257235)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MISGERRANNANRAITNGLIALHIPVPLTTVQWADEYYYLPKESSYTPGKWETLPFQVAIMNAMGYELIRVVNLIKSARVGYTKMLLGVEGYFIEHKSRNSLLFQPTDSSAEDFMKSHVEPTIRDVPVLLELAPWFGRKHRDNTLTLKRFSSGVGFWCLGGAAAKNYREKSVDVVCYDELSSFEPDVEKEGSPTLLGDKRIEGSVWPKSIRGSTPKVKGSCQIEKAANESAHFMRFYVPCPHCGEEQYLKFGDGSTPFGLKWEKSKPETVYYLCEHNGCVIRQSELDQKAGRWICDNTGMWTRDGLAYFSASGEEVPPPRSITFHIWTAYSPFTTWIQIIYDWLDALKDPNGVKTFINTTLGEPYEEAVAEKLSHELLLEKVIHYAAPVPERVVYLTAGIDSQRNRYEMYVWGWAPGEEAFLIDKQIIMGRHDDEDTLQRVDAVINKKYRHADGTDISISRICWDIGGIDAEIVYKRSKKHGIFRVLPVKGASVYGKPVITMPKKRNQSGVFLCEIGTDTAKEMLYARMGAVTAPADEATPYAIRFPDNPDVFTEVEAKQLVAEELVEKLVNGKFRLLWDAKGRRNEALDCLVYASAALRVSVQRWQLDLEALATSRKSEEQDTPTLEQLAAMLAGGVNGNNH
complement(2748051..2748596)       PHAGE_Phage_Gifsy_1_NC_010392: DNA packaging protein; small terminase subunit; Lambda Nu1 homolog; STMDT2_25721; phage(gi169257236)     2.10e-115           SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MNVNKKKLAEIFGCDVRTVTAWQSQGLPLVSGGGKGNEAVFDTAAAISWYAERDASIENEKLRKEVDDLRAAAESDLNPGTIDYERYRLTKAQADAQELKNAEREGLVLETELFTYILQRVAQEIAGILSRVPLVLQRKYPDLCQSHIDVVRTEIARASGRAATIADVEKWTDDFRRAQGE
2748883..2749284                   PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; STMDT2_25731; phage(gi169257237)     7.50e-93            SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MKFKSIAKTVFLFALLTSAGFATGKNVNVEFDKGQNSARYSGVIKGYDYDTYNFQARKGQKVHVSISNEGADTYLFGPGISDSVDLSRYSSELDGNGQYTLPASGKYELKVLQTRNEARKNKAKKYSVNIQIK
complement(2749520..2749993)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage lysis protein; Rz; STMDT2_25741; phage(gi169257238)     4.28e-106           SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MMFNWKTMFVGLLLVSLIVAGRLANHYRNNAITYKYQRDTATHNLKLANETITDMTKRQRDVAALDAKYTKELADAQNRNTDLQRRLAAGSRVRVEGRCTVPTTTTTKTASTRRVGNAATVELSPVAGQNVLDIRAGIISDQEKLKYLQEYIRTQCK
complement(2749990..2750442)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage lysin protein; endolysin; STMDT2_25751; phage(gi169257239)     3.12e-106           SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MMRISEKGITLIKEFEGCSLKAYPDPGTGGDPWTIGYGWTHSVDGKPVKPGMMIDEATAERLLKTGLVGYENDVSRLVKVKLTQGQFDALVSFAYNLGARTLSTSTLLRKLNAGDYAGAADEFLRWNKAGSKVLNGLTRRREAERALFLS
2751031..2751717                   PHAGE_Phage_Gifsy_1_NC_010392: virulence protein GogA; STMDT2_25761; phage(gi169257241)     7.18e-169           SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MPAGIKPIFINNMMSIYGLSHPHDSKVFPDLPEHQDNPSQLRLQHDGLATDDKARLEPMCLAEYLISGPGGMDPDIEIDDDTYDECREVLSRILEDAYTQSGTFRRLMNYAYDQELHDVEQRWLLGAGENFGTTVTDEDLESSEGRKVIALNLDDTDDDSIPECYESNDGPQPFDTTRSFIHEVVHALTHLQDKEDNNPRGPVVEYTNIILKEMGHTSPPRIAYESSN
complement(2752212..2752285)       tRNA                                                                                 N/A                 CCGCCATTAGCTCAACTGGAAAGAGCACGGAGCTTCTACCTCTGTGGTTCGGGGTTCGAATCCTCGATGGCGGA
complement(2752627..2753190)       PHAGE_Phage_Gifsy_1_NC_010392: conserved hypothetical bacteriophage protein; STMDT2_25771; phage(gi169257243)     1.97e-135           SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MTTQISVETLSPITHNQIPVITTELLAHLYGTKIKNISDNFLNNTTRFVVGKHFFKIEKNELREFKNRPETIGLVGKNARSLILWTERGAARHAKMLETDQAWEVFEKLEDCYFSQTLPSPTRQVQPAVDMLNIDLLIKIRDGNVKDIRQVGPDMFVGKVEQILSGLRDSGWIVIKRDLLAEKLATW
complement(2753463..2754140)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage antiterminator protein Q; STMDT2_25781; phage(gi169257244)     2.69e-165           SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MNTQYLQYVREQLMVATADLSGETKGQLLAWLENAQFDTKNYPRKKQRIWDEETESWITLNNPPIPGKQSLAKGSAIPLVKPVEYSTASWRRAVLSLDEHYKAWLLWNYSENTCWEHQVEITQWGWSAFAAQLDGKKMAGKTQERLRALIWLAAQDVKSELAGREVYQYKELAGLVGVSEKNWSETFTRHWLTMRAIFLRLDQASLLSVSESRSEQVAFNLYALN
complement(2754137..2754277)       PHAGE_Phage_Gifsy_1_NC_010392: conserved hypothetical bacteriophage protein; STMDT2_25791; phage(gi169257245)     5.71e-26            SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MKPELIEILRMRWQRLRIYRRPGSVLVDYRILRNFVRIYQFTGFTQ
complement(2754274..2754885)       PHAGE_Phage_Gifsy_1_NC_010392: NinG; STMDT2_25801; phage(gi169257246)                1.02e-147           SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MAKLPRRKCANKECRQWFHPIREGQIVCSYQCASAVGKEQTRKAREAAQRKAQSLQRAAEKKERAAWRQRKAAVKPLKHWIDLTQRAVNDICRETELAEGLGCISCGTKTAFAWHAGHYRSTAAAGHLRFTRFNIHLQCDVCNVYKSGNIEAYRTALVERYGEAAVLALENNNTPHRWTVEELKEIRLAALADLRALKKLEAA
complement(2755094..2755696)       PHAGE_Phage_Gifsy_1_NC_010392: conserved hypothetical bacteriophage protein; STMDT2_25811; phage(gi169257248)     1.63e-146           SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MAHELQLIKQSSGILIPATPETSDILQSKIKLGAVLVAEFRQVRNPAFHRRFFALLNLGFEYWEPTGGAISANERKLVNGYAKFLAAYGGNESALLDAAEQYLEQIANRRVTNGISLCKSFDAYRAWVTVEAGHYDAIQLPDGTLRKHPRSIAFSSMDEVEFQQLYKSALDVLWRWILSRTFRTQREAENAAAQLMSWAG
complement(2755731..2755979)       PHAGE_Entero_mEp237_NC_019704: hypothetical protein; STMDT2_25821; phage(gi435439314)     2.86e-52            SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MSNSALQKSEDSWYDIVRRSDGCVVFSFPSSGRHLIYRVNGMVSMRPLLDDEEVFTPNGFMHFIRRLGYRVTPPSDNMKSTA

#### region 6 ####
complement(4376228..4376956)       PHAGE_Salmon_SJ46_NC_031129: baseplate hub subunit; STMDT2_40451; phage(gi100101)     6.87e-39            SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MIIVSVLRQSKDFTTKHAQWLHKQLKGYDSVCLTDALKIKGVNTAPLLYDWPGWWAKLELFNPLHPVLGNEDILYIDIDSVIVGDITPLTTMKKITLLNDFSQHGASVAPATGIMFIPAPAKKNVWDEFMKNPEKEINAIRTPPYHGDQGFIGRICQDAERWQNILPGRIISYKANIATPKMIGFNPELYDGTGNGKLPDGASIVCFHGSPRPWNTALPWVPYFSLKNTIQSKVKQYKLSLR
complement(4377153..4377443)       hypothetical protein; STMDT2_40461                                                   N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MDYGNTGDMRLFAVMNFYYIDYLCRPITIAVVIFLFWWRLANEMYIYGSKKQKKTGLWINRKLNSKFGIDIELGAVKRGNKITPIPTLILYIPMKI
complement(4377692..4378147)       PHAGE_Haemop_SuMu_NC_019455: enoyl-CoA hydratase/carnithine racemase-like protein; STMDT2_40471; phage(gi418489075)     2.37e-28            SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MSQTTVWLACYKGRSEHRGIARFADWLTRKVTRGIYSHCELAVAHGGNEYLCYSASFRDRGVRGKIIPLPDDKWDKLPLKATLPEVEVFFRKHNGKRYDWQGALGIALYNRERKDRLFCSEFCAEFLGLNDSWRYSPSHLYALVSSWQYDC
complement(4378144..4378749)       hypothetical protein; STMDT2_40481                                                   N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MTQYAYYHPATFEVIDWIDTSSLNVVLPDSVISIDDEQWRLRDKNCWVCLNPLEFITTPPPGKFYRLQGNEWVYDEALFVSALESVKAQVIQAIKAHRDDVTADYIVIDGNHFHSDANSRIQQMSLTRMGQAQQIPAGLMWQAKNNGLIELTNDIAAQFETVTMDHDMRLFANAQRHIAAVEALEDIEAVLDYDYSTGWQP
complement(4378754..4380499)       PHAGE_Salmon_SP_004_NC_021774: phage tail fiber protein; STMDT2_40491; phage(gi526003631)     3.56e-85            SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MDNEFYTLLTDRGMAKIASALADKKQLHLQKMAVGDGGGQYYEPIASQTKLRHEVWRGEMNTLTVAPNNPNWLIAELVLPEDVGGWYVREVGVFDDEGELIAIGKFPESYKPLLPGGCGKQVCIRLIMEVSNTTAVTLTVDPSIVLATRDYVDTRLDEHEHSTNHPDATLTQKGFTQLSNATDSDDETKAATPKAVKAAMAEARNHTHTWNQITGVPDGTLTQKGIVKLNSATDSTSTTEAATPSAVKAAMDKANAAAPANHTHVWNQVTGVPDGTLAQKGIVKLNNATDSTSTTEAATPSAVKAAMDKASAAAPARHTHAWGQITGAPDGTLTQKGIVKLNNATDSTSTTEAATPSAVKAAYDKASAAAPANHSHYQFFTANGTFTVPDGVTQVFVEMLGGGGGGGGGGHTSNTDGLLYCSGGNAGKSGEPEIAIVPVIAGNNYPVTVGAGGASGAGGVLPNSNPTGNVVQVGQAGNSGINGGNSIFIDVVANGGAGGAGGIVQSRIPLSGFNQLDSISGGNAETTFFGKGGTGAVLSNGSNASGYGAGGGGGASVNSLNIALSGYAGGRGSSGFVKISW
complement(4380502..4381134)       PHAGE_Burkho_BcepMu_NC_005882: gp51; STMDT2_40501; phage(gi48696961)                 5.82e-32            SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MDKLLLPPPLASDERFSILANIAAERFAQIDLTALLVYLVDIVDASALPSLAEQFHVQGLEGWLFAANEQEKRELIKQAIELHKYKGTPWAVRRVLEILSLPGTISEWFEYGGKAYFFKVEIKLINQGMDENLFNNLVDLIHEYKNVRSKLEALIVWIINQSAIPVIGSALYGGEITTVLPFQVLEVQQTKPIYFGTGQWSLEITSIYPE
complement(4381127..4382242)       PHAGE_Burkho_BcepMu_NC_005882: gp50; STMDT2_40511; phage(gi48696960)                 2.60e-132           SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MAIAEPDFIDRDPAQITSEMIAQYEEASGKKLYPAQAERLLIDLFAYRENLVRIAIQEAAKQNLVAYSRAPMLDYLGELVGVHRLPAQAAKTTLQFSVTQAAKSNLVIPQGTRASASDSVMFATDEDVLLPAGSLSVAVTATCVVTGEPGNNWQPAQISALVDRVGNYDISVTNLTASSGGCGEENDDALRKRIQLAPESFSNAGSYGAYRFHTLSVSQSIIDVAVLGPDEGLAEGCVELYPLTLNGLPGPELLAQIEREVSKEKKRPLTDKVSAKCSPRVAYQISARLTLFTTADQETTLAAAREAINTWTRSRQTRLGQDIVPNQIIKVLQVDGVYDVALDMPAKKVLQAHEWAECTAIDVTIAGVSDG
complement(4382233..4382592)       PHAGE_Burkho_BcepMu_NC_005882: gp49; STMDT2_40521; phage(gi48696959)                 3.63e-43            SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MNTKTRPSTLHWQPALQRPEEYVCGLDDIHQAIHIILRTPRGSDPHRPLFGSNLWRYIDYPIERAIPHVVRESVEAIRMWEPRCRLLKVTPTIDGEHLTLRVQWRAADGVINSTEVLWR
complement(4382756..4384303)       PHAGE_Salmon_epsilon34_NC_011976: GtrC; putative membrane protein; STMDT2_40531; phage(gi221328637)     7.59e-62            SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MNTMLKILPKTAMILLAFLAIFLIEWYTPIHSDDYRYYLLGISPESHFHHYMTWSGRIIADYTSALILYTRSQLVYSISAAVSTLVFCYFIVKTPSGTLRWNKSDYLLFPLIFFTYWISNPNLGQTTFWIVGAANYLWTNLFVVAWLFFFYTITIKNSKAISPWVALLSFMAGCSNESVSPFVSLISVLAIAYELWQNKSVSRNKIVYSLCAIAGSCVLILSPGNFIRASGKEFWYGRPIFERIFIHLTERVHNHLALIWIAYVVLLLLVLLVIFNKQIRAKIDKTSLICAALVVCIGIGTSLIMFASPSYPDRVMNGTFMFFLLAISFIAYALLKSGVKAGVVGVTAVTVLCGIVFLWSYSLMLNGYKKTAGQEIVRQKIITKEIAAGKQKFIIPDYYFVKLQNSGGHFGLFHDPAVYGEYYHVQAIFKKKVNFDYSVIANGAKHSLSNETTAYSNTRGDFAIISREQLTGSITLSVNGRQKTIPVEKMKHAEINDEFWYYASVDKGEITAISF
complement(4384303..4385232)       PHAGE_Entero_SfV_NC_003444: bactoprenol glucosyltransferase; STMDT2_40541; phage(gi19549012)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MKISLVVPVFNEEDAIPIFYKTVREYSSLKPYNVEIIFVNDGSHDATESIISALAVADPLVVPISFTRNFGKEPALFAGLDHATGDVVIPIDVDLQDPIEVIPHLINKWQAGAEMVLAKRIDRSTDGHLKRKSAEWFYRLHNKISTPKIEENVGDFRLMSREIVENIKLLPERNLFMKGILSWVGGQTDVVEYARAERVAGNSKFNGWKLWNLALEGITSFSTFPLRIWMYIGVSVSALSLIYAMWMIIDKLMWGNPVPGYPSLMTAILFLGGIQLIGIGIMGEYIGRVYTEVKQRPRYIVKNKKTMME
complement(4385229..4385591)       PHAGE_Entero_SfV_NC_003444: putative flippase; STMDT2_40551; phage(gi19549013)       2.68e-59            SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MIKLFIKYVSIGVLNTALHWAIFALCVYGFQTSQALANVAGFAVAVSFSFFANARFTFGASVSTGRYLLYVGFMGVLSAVVGWTGDKCAMPPIFTLIVFSAISLICGFLYSRFIVFRNEK
complement(4385919..4386641)       PHAGE_Burkho_BcepMu_NC_005882: gp48; STMDT2_40561; phage(gi48696958)                 3.31e-38            SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MKGVTRQTGIISDIDEAVVRVRVTLPECDNLRSNWLAVLQRNTQDNKDYWLPDIGEQVEVSLDDNGEDGVVLGAVYSSVDTAPLASRDKRYVQFSDGAAFEYDRALHQLTVNGGIEKIVIEVKEHTQLTSPQVEVRAQHVTVISETVDVAATSVGVKAVDVNVEAPHTGIKALNVTVDAPLSTFTGDVTVMKKLTWLGGMAGSGGVGNSAVITGNVNVLGNVNASGTLMDNGGNSNHHSH
complement(4386651..4387694)       PHAGE_Burkho_BcepMu_NC_005882: tail protein; STMDT2_40571; phage(gi48696957)         2.05e-101           SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MAEITVSGGVFATLTPIFTLWYGHKEITYDIAPYVTSISYSDSIKNESDVIAIALEDSTGRWVNEWYPGKGDTLALRLGYQGEDLLDCGIYVIDKIDISAPPSTVNIDGIATSVSKALRTKNSQGFEETTLSAIASRIAQKHGLTLAGKIAPLTIDRVTQYAETDVAFLKRLASEYGYTVKVTATELIFSHLPTLRCLAPVKTLRRTDVSHYTFKDTINRIYKNATVQHQNSKQKELVIYTHDSQEKTSARGAATSADTLKINSRAPDTGAAQAKANAALDSHNEYQQTGTLSLMGCPQLTAGNKIELSDFGVLSGQWLIDKSMHKLTRSGGYTTEIDISRGPATSQ
complement(4387682..4387891)       PHAGE_Burkho_BcepMu_NC_005882: gp46; STMDT2_40581; phage(gi48696956)                 6.98e-23            SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MRYLEHVTTDGERWDNLAWRYYGDALAYERIIAANPHVAIMPVLPSGVRLIIPVISVTQTTPELPPWLR
complement(4387891..4388844)       PHAGE_Burkho_BcepMu_NC_005882: gp45; STMDT2_40591; phage(gi48696955)                 5.01e-50            SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MYAVLGEIEFDVVAYWDEFESTMGVDYTSHARIEGKPGVQFIGDKLDKITLKFNFHSQYCQPTTELNRLREAMTAHQAMALVFGNGDYRGWFVITDLTATHQHTDPYGNVIAQGGSLSLQEYTGDPKSPLLPPAITTQEPNIDEMLDELPDVNDSWFDELLSVVEEGMREAKEMMDEVADAIDDIKKTIAQAKELVKEAKALKEKCGDIVDSLKKTMSSIDALFQQPLDLQTLAGLPKALAAKMQELIDSLPGIRECAGDAGTLIEHAESLFDAITSSVAEATYDSAATLVNQARGTLQTSAPDVSQLAAADITRSL
complement(4388844..4391198)       PHAGE_Burkho_BcepMu_NC_005882: gp44; STMDT2_40601; phage(gi48696954)                 7.55e-61            SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MANDIITQLQARNETLTQAIARYGSLNASTLHTLSFEQTKVTRLTQQLANSALRREENDKQRAGLLEKTQTFAGQLGKLLNVETPDWKLPYEFQGNMVDMAAKGGMDNTARDALSLNIRDWSLDFNQDQKDLQSTAATMIEGGVSALQDLSRYMPDIAKAATASRDSAQSWAQAALATRDKLNIAPDDFRFAQNMLYSVAKSGGGSVAEQTQWINAFAGKTGAQGKEGIAELTATMQIAMKNAPDAGAAAANFDHFLKSAFSKETDSWFARQGVDLQGSLLEHQQNGIGVTEAMTHIVQMQLEKMNPQILDTFRQTMKIEDLSARGDALQAMVEKFNLGAMFGDAQTRDFLAPMLANMDEYRQLKASAMQAAGQHVIDDDFAAKMTSPGEQTKALQLSLNDLWLTVGLELMPAIGELAQSITPLVRQFSAWLRENPALVQGVAKVVSVIWLFNGALNILRLGANLIASPFIRLIDIFLKVKAGLALGGGSRALSVLKSFGNGAKSLTMLLGNGLIKGLRLVGQTFIWLGRALLMNPVGLTITAIASAAYLLYRYWEPISGFFAGVWERIKTAFDGGIAGVTRLILDWSPLGLFYRAFAGVLDWFGIELPASFSEFGGNILDSLINGILNALPFLSGAIEKIKALIPDWAKSALGISAEMPSVAAAVPGIAGTMVAQQASAPLASGAKAVTTSAKTMASPQPVKTKSAATPPTPAALPGKSGGKPYTLPSRAQSNVQVHFSPQVTVQGSGANAAKDINNVLSLSKRELERMINDVMAQQRRREYA
complement(4391383..4391700)       PHAGE_Burkho_BcepMu_NC_005882: gp41; STMDT2_40611; phage(gi48696951)                 1.91e-10            SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MNEKYTLQFPFTSAAGERIDVLQLRRLKVKDMRAARRASDKPEEWDEPLMAAMTGLVTEDLAEMDLLDYQALQKRFQSMLSMATEPTATVAGNGAAGEVVSLSAQ
complement(4391752..4392276)       PHAGE_Burkho_BcepMu_NC_005882: gp40; STMDT2_40621; phage(gi48696950)                 6.46e-90            SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MAGKIQINRITNANIYLDGNNLLGRASEIKLPDISMIMQEHKALGMVGKIELPAGFDKLEGEIKWNSFYHDVMRKTANPWQAVALQCRSSIDCYNSQGKADQLALVTHMTVMFKKNPLGTFKQNENPEFSSAFGCTYIKQVVDGETLLELDYLANIFRVNGADQLNAYRNNIGG
complement(4392276..4393703)       PHAGE_Burkho_BcepMu_NC_005882: major tail sheath protein; STMDT2_40631; phage(gi48696949)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MAANYLHGVETIEIETGPRPVKAVKSAVIGLIGTAPCGPVNQPTLCLSESDAAQFGPGLANFTIPQALKAIYDHGAGTVVVINVLNPAVHKSTIPSETVKVDDNGQIQLKHGAVQTMNIGRSTNAGNAYIKGTDYTIDMLTGKITCMGTNLKPGVQAYVNYTYADPTKVTAADIVGAVNTAGDRTGMKLLQDTWNQFGFYAKILIAPVFCTQNSVAVKLIAQAEALGAITYIDAPIGTTFQQVLAGRGPQGAINFNTSSDRARLCYPHVKVYDSATNSEVLEPLSSRAAGLRAKVDLEKGFWWSNSNQEIQGITGVERSLSAMIDDPQTEVNQLNENGITTIFNSYGSGLRLWGNRTAAWPTVTHMRNFENVRRTGDVINESIRYFSQQYMDMPINQALIDALTESVNTWGRKLIADGALLGFECWYDPARNEQTELAAGHLLLSYKFTPPPPLERLTFETEITSEYLVSLESNR
complement(4393693..4393890)       PHAGE_Burkho_BcepMu_NC_005882: gp38; STMDT2_40641; phage(gi48696948)                 2.55e-11            SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MKYIYSGPASGVTLADGQEVLLWPNSEISLPEDNEWVITMIARRHLVPVVTQEVETNEEEIVHGS
complement(4393887..4394342)       PHAGE_Burkho_BcepMu_NC_005882: gp37; STMDT2_40651; phage(gi48696947)                 3.09e-15            SalmonellaentericasubspentericaserovarTyphimuriumstrDT2METLSVIHTVANRLRELNPDMDIHISSTDAKVYIPTGQQVTVLIHYCGSVFAEPENTDATVQKQLIRISATVIVPQISDAINALDRLRRSLGGIELPDCDRPLWLESEKYIGDAANFCRYALDMTASTLFIAEQESKDSPLLTIVNYEEIQ
complement(4394502..4394816)       PHAGE_Burkho_BcepMu_NC_005882: gp25; STMDT2_40661; phage(gi48696935)                 1.58e-29            SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MKLSIDFWEVISLLLSFVGLMFAAGKLLLAQIEKRLNERFEALEAARRESEAGWSRLEREFLEFRADLPLHYVRREDYLRGQAVLEAKLDALYSKIELIQRGNH
complement(4394829..4395434)       PHAGE_Pseudo_B3_NC_006548: endolysin; STMDT2_40671; phage(gi56692593)                4.19e-73            SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MRYQYVCLVCAMTFLSADAAEPPRASLQWRNEVIRTAREIWGLNAPVADFAGQLHQESGWAPDALSPAGAQGMAQFMPATAKWVSQLYPELHENKPFNPAWAIRALVQYDRQLWKSVLAKNSCQRMAFTLSAYNGGQGWVNRDKKLAAAKGLDASIWFEHVERVNAGRSAANWRENRHYPKAILYQHAPRYLQWGQASCIH
complement(4395437..4395724)       PHAGE_Burkho_BcepMu_NC_005882: gp21; STMDT2_40681; phage(gi48696931)                 3.71e-14            SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MRKIIVPRLSGWLVASVVLFALIGWTSSAQIPVVIYKLSLVSLSAVLGYWLDRSLFPWARPDSFCPWEESLCCAAAMIRRAIIVAAICLAVAMGL
4396300..4396647                   PHAGE_Burkho_BcepMu_NC_005882: gp01; STMDT2_40691; phage(gi48696911)                 2.55e-30            SalmonellaentericasubspentericaserovarTyphimuriumstrDT2MIQKSKEMVRLPEIINDLAFHASQVLIESMNIDSASAENAGQAIADRMMRNWGGQSIYFPKGISGRASERDYQIYSECDGRNYAELAKKYNLTLQWIYKIVKRVHTEKQHQRRML
