gi|00000000|ref|NC_023915.1|  Salmonella enterica subsp. enterica serovar Typhimurium plasmid 99184, gc%: 49.85%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
33371..35419                       PHAGE_Gordon_Hedwig_NC_031099: recombination endonuclease subunit; D645_p16065; phage(gi100054)     1.41e-06            SalmonellaentericasubspentericaserovarTyphimuriumstrSTM709MPSGISGFLSKRGAGRANVRQDISNYKGMIMPVTKCEPETTRKASRKSAKTQETVLSALLAQTEEVSVPLASLIKSPLNVRTVPYSAESVSELAESIKGVGLLQNLVVHALPGDRYGVAAGGRRLAALNMLAERNILPADWPVRVKIIPQELATAASMTENGHRRDMHPAEQIAGFRAMAQEGKTPAQTGDLLGYSPRHVQRMLKLADLAPVILDALAEDRITTEHCQALALENDTARQVQVFEAACQSGWGGKPDVRVIRNLITESEVAVAGNSKFRFVGADAFSPDELRTDLFSDDEGGYVDCVALDAALLEKLQAVAEHLREAEGWEWCAGRMEPVGECREDAGTYRCLPEPEAVLTEAEDERLNELMTRYDALENQCEESDLLEAEMKLMRCMAKVRAWTPEIRAGSGVVVSWRYGNVCVQRGVQLRSEDDATDDADRTEQVQEKASVEEISLPLLTKMSSERTLAVQAALMQQPDKSLALLAWTLCLNVFGSGAYSKPAQISLECEHYSLTSDAPSGKEGAAFMALMAEKSRLAALLPEGWSRDMTTFLSLSQEVLLSLLSFCTACSLNGVQTRECGHTSRSPLDSLESAIGFHMRDWWQPTKANFFGHLKKPQIIAALNEAGLSGAARDAEKMKKGDAAEHAEHHMKDNRWVPGWMCAPHPQTDATERTDNLADAA
35474..35908                       plasmid SOS inhibition protein PsiB; D645_p16064                                     N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrSTM709MKTELTLNALQSMNAQEYEDIRAAGSDMRRNLTHEVMREVDAPANWMMNGEYGSEFGGFFPVQVRFTPAHERFHLALCSPGDVSQLWMLVLVNCGGQPFAVVQVQHIFTPVAISHTLALAATLDAQGYSVNDIIHILMAEGGQA
35905..36624                       plasmid SOS inhibition protein PsiA; D645_p16063                                     N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrSTM709MSARSRALIPLSAEQQAAMQAVAVTEQRRRQGRTLSAWPYASAFFRCLNGSRRISLTDLRFFAPALTKEEFHGNRLLWLAAVDKLIESFGEVCVLPLPSDAGHRLFPSVPFREGERRRQKTTLTEQKYSRQREREAERRELEYQTCFAQAQIDLAFHTPATVGSWLSRWSGVVEEHDLETIFWGWCGRFPSLSSFDRFFWQEEPLWRLIFEAGEAGRGAPVQIRALEQWMIPNKLENAI
36748..38016                       PHAGE_Geobac_E3_NC_029073: transposase; D645_p16062; phage(gi985758480)              7.91e-88            SalmonellaentericasubspentericaserovarTyphimuriumstrSTM709MTMLRATKIRIYPTPEQAAFLNAQFGAVRFAYNKALHIKKHAYQRHGVNLSPRNDLKPLLSVAKKSRKYAWLKEFDSMALQQAVINIDVAFSNFFNPKLKARFPTFKRKHGKQSSYHCVGIKVLDNAIKIPKLAPIEARLHRELHGKLKSITVTRSATGKYYASILCDDGASAPEKPTYLKEEKITGLDMGLEHYAITSDAVKVPNPRHLINVSRNLRRKQKALSRKQKGSANRKKARIRLAALHERVANARADFQHKLSRAIVDENQAVIVETLKTANMMKNHNLARAIGDAGWHSFITKLEYKAATKGVHLVKLDQWFASSKTCHCCGYKMPEMPLHKRIWRCPECGAEHDRDINAALNIRQKGILELKAAGLVVSAHGASVNPSHRRLRPEKWEASPDRAGSSHGWSGGHAACPLHSPE
37985..38875                       PHAGE_Rhodoc_CosmicSans_NC_028677: ArdA; D645_p16061; phage(gi966199624)             4.32e-10            SalmonellaentericasubspentericaserovarTyphimuriumstrSTM709MRRVLCTRRNKEVAGGSAFTRPCGAWPCGVSALWPQRRVRAVPCLHLSRAGRDARVRFAAAVTRSLLPVCRDFPVVRPLRFRGLTLQLPSAVCVRLRLPLRPCIPALSPGFYGGTAPPGVAEHVTMEDSGMSVVAPAVYVGTWHKYNCGSIAGRWFDLTTFDDERDFFAACRALHQDEADPELMFQDYEGFPGNMASECHINWAWVEGFRLARDEGCEEAYRLWVEDTGETDFDTFRDAWWGEADSEEAFAVEFASDTGLLADVPETVALYFDYEAYARDLFLDSFTFIDGHVFRR
39604..40038                       PHAGE_Yersin_fHe_Yen9_04_NC_042116: hypothetical protein; D645_p16060; phage(gi100356)     2.82e-16            SalmonellaentericasubspentericaserovarTyphimuriumstrSTM709MTVSSTISVFCRDGVFRTVYCHLHGEPTWNGRILHTHYATGQQAEALVEHGDIRCLGPRCDKPAGHTLQNPVDGVTAYYGRDSGFRMDSEAREYRSFREAIATESTEEVRFHYVFIDGYWKVMYRTPEGWKMKALALALRRCPK
40132..40398                       hypothetical protein YgdA; D645_p16059                                               N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrSTM709MRPSIIFATAEYVKRLREECLRENKPLHRHTRFRRQELAQDEINPDVLAMSGHIARRCSEQKRVRIPAMKVSEWGHLLRALEIERVCH
40463..41365                       PHAGE_Sodali_phiSG1_NC_007902: transposase; D645_p16058; phage(gi89886005)           1.01e-96            SalmonellaentericasubspentericaserovarTyphimuriumstrSTM709MSKKKTTTTPTPHDAAFRSFLANPDVARDFLELHLPAEYRQLCDLSTLKLEPATFVEPDLHQYASDILWSVKTTGGEDGYVYTLIEHQSTENLYMPFRMLRYSVAAMQRHLEQHKTLPLVIPVLFYHGERSPYPYSMNWLDCFENPALAAKIYTNPFPLVDITVVDDNEIMNHRRMAALTLLMKHIRHRDMMELLDKLPQVMVEISDEQVRVLIHYIVNAGDSVSPEFMRALAERLPQHEDKLMTIAERLEQKGRQEGRMEGALEKALAIACQLQKMGMTPEQIKQATGLSDDELKKITH
complement(41677..41928)           PHAGE_Erwini_PEp14_NC_016767: hypothetical protein; D645_p16057; phage(gi374531851)     1.50e-06            SalmonellaentericasubspentericaserovarTyphimuriumstrSTM709MTGWELRIWRKSMLWSREKAAREFGVTQRTWHAWENAEQVDVTVWRTTQALSVRDLLPHMQGMRKADIIRRLENELGETAGNV
42049..42384                       hypothetical protein YfgA; D645_p16056                                               N/A                 SalmonellaentericasubspentericaserovarTyphimuriumstrSTM709MRFSLFSPVREWCASDHHMPLLCRRFSSVAPYAALPAHLTVCKATAPDGAAVSACLPPHCGLFSADGLSGGTYMTTSRFSRPGERCTSHKTFCRRRQKLLRLPPDNCPVTW
42506..43357                       PHAGE_Pseudo_phiPSA1_NC_024365: DNA restriction methylase; D645_p16055; phage(gi658307732)     1.37e-16            SalmonellaentericasubspentericaserovarTyphimuriumstrSTM709MMNQTLPTADLNTAGTTDVIPSVAIDRIIAQRNEGIALFMQAMECLATARKILLDASGDIFLYGFEDCVTDSVRRIDKPEEAKRNITRLADRKIWERLMTDTGMYTFMSSCQRDEWNSQLMSDTCPEITLDNVLATFRHLNACKMQTFEQGLIDVYRKLSWDYRTNNPCRLGKKIIIENLLYRWSNGRVTLDCSGREALDDLVRPFYLLEGRNVPDFRNSIGAQYGEFLGNGDNVGKLLEGEYFTVRGYQKGTVHIVFNRSDLVEKLNDIIARHYPGVLPPRV
