gi|00000000|ref|NRAP01000001.1|  Pseudomonas aeruginosa strain env138 596372, gc%: 66.26%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
473980..474520                     PHAGE_Pseudo_MD8_NC_031091: hypothetical protein; CJT74_02325; phage(gi100012)       4.53e-16            PseudomonasaeruginosaMRSLSLLLLLSLASTCEAAAVFRCEDASGHVSFTQLGCPAGQAGETVVADNPPPGGRSVTPMAETKTKKASIGRKSVPLAVIGEREDRCGRRLDEKERRKAIVEQRIMAGMTRSDVERALGKPDRVSGNNAEVRYQYKADKRRGARSVSFDQEGCVKGKGRYRVERVDPGSGRAVLIPMA
complement(474541..474993)         PHAGE_Haemop_Aaphi23_NC_004827: hypothetical protein; CJT74_02330; phage(gi31544045)     6.45e-07            PseudomonasaeruginosaMVMLINRHVGIVRLDAVISENLAQAAVSARGDQLITIVGSIVDHAPAGEPLPSLLPMEGGSRALNECRVRKGIAALTSLQGASETVDVQTGFHLYRGLFITRVVARRTAERGLSLTITASQRRARRAGGRLLKTVVRLFHAGRATPCPAR
complement(475046..475549)         PHAGE_Aggreg_S1249_NC_013597: hypothetical protein; CJT74_02335; phage(gi100017)     8.00e-08            PseudomonasaeruginosaMSSATVRLDHAALRETLRQLFGLPAGSVIDADQLLAPPAIPFMTLRLESSSLLGKVRREFSASGEQESLLASCESIFRLTWHGPEAHQYLQDARCLLQSGNAGERLRVLKASLLRLTPIENLSVVQDGQALGQARFDLVLAHEHVLLVDLERTAPGQASGGTGGTAS
complement(475641..475916)         PHAGE_Pseudo_phi297_NC_016762: hypothetical protein; CJT74_02340; phage(gi374531283)     1.97e-14            PseudomonasaeruginosaMVDPLSTLTVLVCSAICMRLITYRRAGARFRPGVSLCAYLLALCTGCQALGIVAGLYRAEHLSPWMLGVLLVLLVLLLQARGNLARVLRLH
complement(475909..476283)         PHAGE_Pseudo_phi297_NC_016762: hypothetical protein; CJT74_02345; phage(gi374531282)     1.86e-32            PseudomonasaeruginosaMSEPSSAASAASAMAGVGLAMYLPGIDGNALLGGFGGAIFFVVFARDYNALTRLGYLLVSWVGGYYAGIEALGRGLTQTSGMAAFVAATLCVTGGIGMLEWMRGGELPSWMRGLLRRRGGKSDG
complement(476448..476978)         hypothetical protein; CJT74_02350                                                    N/A                 PseudomonasaeruginosaMFQSTEQALAVAYWMFEHQPGPKSSTAMVIDGLRERFDRSFIEHLPSGLSPHEWQAQAVMTVRFAQRQLAAHPLELAVVRAEFARGRDFVLGLAALRDWLKPGADPIEQRATLALLMRMFRRPPSSIREIERLSGLSKSTLHRWDKEWRERVVALLRQALQRLEEPMAEVGIVGER
477149..477862                     PHAGE_Pseudo_vB_PaeP_Tr60_Ab31_NC_023575: Putative Cro/CI transcriptional regulator; CJT74_02355; phage(gi589286922)     3.39e-74            PseudomonasaeruginosaMELKDRIKAARKHAHLSQVQLAQAVGMTQTSISDLERGKSRATSFVAQIAGACGVNPLWLAEGRGEMLAERGQANAGPNASWLGAVESWDDETPLDADEIELPFYKEIELSGGKGSTVILQTGGRKLRFGKYTLRKKNIDPASAACVTVSGNSMEPVLPDGSTVGVDTSARTIKDGDMYAFDHDGQLRVKLLYRLPGGGLRIRSFNSDEHPDERYEPQEAAEHINVIGRVFWYSVLV
complement(477960..478036)         tRNA                                                                                 N/A                 GCACTCATAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCTGAGTGCGCCA
complement(478148..478224)         tRNA                                                                                 N/A                 GCACTCATAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCTGAGTGCGCCA
complement(478342..478432)         tRNA                                                                                 N/A                 GGAGAGGTGGCCGAGTGGCCGAAGGCGCTCCCCTGCTAAGGGAGTACACCTCAAAAGGGTGTCGGGGGTTCGAATCCCCCCCTCTCCGCCA
complement(478494..478679)         PHAGE_Pseudo_phi297_NC_016762: global regulatory protein; CJT74_02375; phage(gi374531265)     1.30e-18            PseudomonasaeruginosaMLILTRRVGETLMVGDDVTVTVLGVKGNQVRIGVNAPKEVAVHREEIYQRIQKEKDQEPNH

#### region 2 ####
569470..569483                     attL                                                                                 N/A                 GAGAAACCGACGCA
complement(569795..570802)         PROPHAGE_Pseudo_PAO1: bacteriophage integrase; CJT74_02800; phage(gi15595925)        1.55e-142           PseudomonasaeruginosaMSITKLPDGLWFVDVEPIKGKRFRKRFKTKGEAQRFEATVRQKCTENPAWSIKPKDRRKLSELVQLWYDLHGHSLRDAPRRLSKLLQLAARLRDPVGTALDASSYASLRRMRLEEGISGKTLNNELGYIRAVFNELKDLKQIDYDNPLAGVKLLKLQERELSWLTTEQIGELLDSIRSRCDNPHTELVTLLCLATGARWSEAEKLPAHRLQGNVVTYAGTKSGKVRHVPIPPELADRVREHWRMHGPFTSCITSFRRALERTTIQLPQGQASHALRHSFASHFMMNGGNILTLQKILGHSTLTMTLRYAHLAPDHLQDAIHLGPLRDFSHLNGQV
complement(570802..572094)         PHAGE_Pseudo_Pf1_NC_001331: hypothetical protein; CJT74_02805; phage(gi9625374)      0.0                 PseudomonasaeruginosaMRKVTHQHRLIVQPDGQIIDSPRGRLFVDARPGSFTDLSGVRVLRCGVDTVRQLYNGMIRPEVMALFDDKEPTAIFAGHQWSKGRIGRDSGYQFRLQNADLGLILLIKNHNIKLDTIGSHLKIEVSPHAIDGTDPAALQTMLDGLAAAVLTHCETNQCAVHIALDVQGWTPPADIVDRMHCRSNRVRQISGIDRIEFDGNASVYGRGETFMFGSANGLQLCIYNKTLQARASDKLDYWNAVWSGLNGDPFGAGEAAYDPKETVWRIEFRFHHSVVEQFAQGTCLPSGAVIATQTYAGICPHLQGLYGYACEAFKLLARDAVYDPFWSLIMQDVKVQVECDPLIDRVEYRRYYKTAQGFSGKNCEMFLGQFISLIARERIPAKKAIESAHRLEFWHVIEDHYLAKGWTRRELEQHIKDLISDRYLRRGYAV
complement(572452..572653)         PHAGE_Pseudo_Pf1_NC_001331: hypothetical protein; CJT74_02810; phage(gi9625380)      8.32e-12            PseudomonasaeruginosaPVRGRAPGSSEQLHRSGERKHGRSAPLTAHPPETASAWECGAALPHRAPEPSAARAGQGRSPLCST
complement(572572..572961)         hypothetical protein; CJT74_02815                                                    N/A                 PseudomonasaeruginosaMNDCRVILDAESALPYLGQTVLVEMGWEDDPETVWRLLRIIGVVLPAEGVRDEPHFMTVPVGVTDEFANETFWDNIRTIRVMRYRDRHSSGNVLGRITHPATSRSGAALPARRNSSTVPANGSTGGAHP
complement(572954..573169)         PHAGE_Pseudo_Pf1_NC_001331: hypothetical protein; CJT74_02820; phage(gi9625376)      2.17e-09            PseudomonasaeruginosaMSKTQVAPELCTVAAFAEMCGVSYAEAEQWAEDGTIPSLDMGTFRMVNLARFRADLIKGKNTFDAGDYRHE
complement(573166..573384)         hypothetical protein; CJT74_02825                                                    N/A                 PseudomonasaeruginosaMDAEEFTLKDLLAPPPLMPWRNFADWIRMGDSHDIVWGWIRNGYIPSHKVGKHMMVNVALLTSQLMDKEIRL
573481..573903                     PHAGE_Escher_TL_2011b_NC_019445: hypothetical protein; CJT74_02830; phage(gi418487671)     1.50e-10            PseudomonasaeruginosaMSREDPQFKLRMSPQLRSQAEQAAKAAGRSLNAELVARLEASLLAKNTSEGLIPAVRARELALMARSGIPDEIRRRAIEAIAKAIRLGHSEAVAILDDLHLESGISDAELDDLTKDILTELKEAGYKIKWDDVTALWIEF
574966..574977                     attL                                                                                 N/A                 CTTTTTCTTTGC
complement(575185..575586)         hypothetical protein; CJT74_02835                                                    N/A                 PseudomonasaeruginosaMDGGAVKLSTFIPLQIRKRGVRKVVIRPDEESAGSTTRNQFDSPMLVALARAFYWQQLLDDGVVASGTDIAQREGLHHSTVNELLRLTLLEPASVQAILAGKQPRCMSLIWFQRNPLPLDWVEQRRVVDGFDA
complement(575628..576968)         PHAGE_Entero_EFC_1_NC_025453: site-specific integrase; CJT74_02840; phage(gi725950572)     2.60e-41            PseudomonasaeruginosaMSIAILASPKRCAVYCRVSSDERLDQSFNSIDAQKEAGHAFIKSQTHEGWIAVADDYDDGGFSGGNMDRPALKRLLADIEAGRIDIVVVYKIDRLSRSLADFARMVEVFDRCGVSFSAVTQQINSATSMGRLMLNVLLSFAQFEREVTGERIRDKIAASKAKGMWMGGPLPLGYDVQNRLLVVNEAEATVVRRIFADFARDRSTTHMVRNYAAEGIRTKTGRTFCKQSIYKLLHNRMYLGEIVHKGRYYPGQHPPILTRAQWQAAHDVLAQTAEERRAAVATDGRGLPLLRGLIFTTSGERLIPTRTTKKGQCYRYYTPAKDRHYGAGASNFGSLPAESIEALVVEQVCQVLRAPESVQAVWDRVRESGLDLDQARVVVPMRQLAAVWPSLFPAEQRRLAQLLIERVLIGNDGLEILWRDAGWVELIDELRPNSIGAELAEVEMTV
complement(576965..577411)         elements of external origin; CJT74_02845                                             N/A                 PseudomonasaeruginosaMNDSISAQVAALPGLPMKALWALWDAHFPRRPAHTNRHYVESRLAYRLQEQAYGPLPAGVRRYLVERGAQFSKIQQAGRGTECHLMPGTVLVREWDEREYRVTVTADGLYELNGQRFKSLSAAARHITGTQWSGPKFFGLKAGKGGKR
complement(577498..578340)         hypothetical protein; CJT74_02850                                                    N/A                 PseudomonasaeruginosaMKSNPSRRQASTSYLDTLRSEFDALTQQLQEAEAAASTAQQEADAKRRAYHELEKRSNSTHWSVTEQRLFREKNHLEAVARQLQQDLVPLREEHARLKRKVQAPAQWEAARVEMAALTDRRTALAQEISKARTLQTQLDARIEAVEQQIASDTQSTASRLINAGELTALPAALASLHAELTATRHTRDEVARRIQTLQAEHDALPDQIRLARDSYRGAQAIVAELELHEQLPAFIGVIARAAVARRRAGFTREQGRYEIEIPVEALEAASTALDAELSAG
578682..578906                     PHAGE_Pseudo_PPpW_3_NC_023006: hypothetical protein; CJT74_02855; phage(gi564292511)     6.97e-12            PseudomonasaeruginosaMKPLPPTELLSPRQLAARWGLSEKTLERWRMLGTGPAFLKLGSRVLYSLAEIEAHERERTRRCTAGDRPREVWA
578906..579151                     hypothetical protein; CJT74_02860                                                    N/A                 PseudomonasaeruginosaMNRQQRRERERMTRQLRAHIARHGIEPVLDKMFGPGSWRYDADEELWIVPDTQHTGPGRSYYCVRANGDWFKARLDGEHTQ
579148..581289                     PHAGE_Pseudo_AF_NC_019923: putative DNA primase\helicase; CJT74_02865; phage(gi431810342)     3.76e-18            PseudomonasaeruginosaMSTAAIDAINVPPHPFFDFNDAPDRIERRHDKDELRARLLDQLEAVLMYLFPNGKRQGTRFVVGNVQGDAGDSLVIELEGPKRGVWIDFATGESGDVLALWAAARGFAVPRDFGELLDDVGDWLVVPTSFIPAPSKSSATHDTLGPHTAKWDYRSADGDLLACVYRYDTPEGKQYRPWDVASRQTRMPDPRPLYHLPAVAKADTVVLVEGEKCADALMQLGIVATTAMGGAATALAKTDWSPLAGKTVIVWPDNDEAGARYANSVIPKLLVIGAKVRRIHVPDDKPQKWDAADAVAEGADVQALLTNAVPVTNDQPHQPFEITQWRARERFTGDPQPRRWLIEGVFPLAQAALVAAGGGVGKSFLLLALAREVAAFDGVWADAPMLFGGALAGQGVAIYVTAEDDAIEVHNRLNALGPIPDRLYVLPLPDAGGAIPLFAPDPATRGPSTTPAWLALEQQLTTLAGLRLIILDPLQPLCALDLNVPENAQFVCSRLAALAASTGASMIVSHHFAKREASTPEQAREAIRGTGGLVDGVRSVYALWNPKEDQAKAICKALAEPFERGRVVMGGVVKANGRANLRVTTFLRDSRGLLVDRSDALVRARQTDVDLLPDLKAAIARAAAEGKPYTKTGGNGVYERRHELPEAFHAIGKHRLAEWVGTLLDREELVMAMVDGSKLVKWLDVPDGPMASGEAAFVTGHLRRSTTGQRGQA
594363..594374                     attR                                                                                 N/A                 CTTTTTCTTTGC
594628..594641                     attR                                                                                 N/A                 GAGAAACCGACGCA
