gi|00000000|ref|NUDY01000044.1|  Bacillus pseudomycoides strain AFS008599 113391, gc%: 36.64%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
complement(39..1079)               PHAGE_Bacill_0305phi8_36_NC_009760: Gram-positive endolysin; CN641_17045; phage(gi156564218)     2.25e-82            BacilluspseudomycoidesMTAEKYIVDISKFNDEINWDVAAPQLELAICRVQYGSNKVDVLYNEHVVNLEKRGVPHAAYAYGCYVSVNDAIVEAKDFLNRVNKNAKFLVLDVEDDTVASMESKGNLGDLAKASQAFIDTCKAAGWKVGLYVSHHMYNQYNLQNVKADFIWLPRYGTNDGQPHEKPSYSCDIWQYTDNGYIKGIGRVDINLLLGDKTLDWYIGDDVNTIAPSKNVGIGIAVSKYSVGYGINLYDAPDGDFTEERFSDQTPHVILEGVWYGGNENMLCFGPSRWAKQEHFDVQWFRAYSKYPPGYGINTYSAPGAPDGSFKGQVDGTTSYEIYSRENGWIDLGQRAFVKEEHFDIR
complement(1079..1285)             PHAGE_Staphy_SpaA1_NC_018277: Holin, phage phi LC3 holin homolog; CN641_17050; phage(gi399498884)     5.23e-35            BacilluspseudomycoidesMSKQDIKKRFRNWKTWVAVFSLVGFLFTQFGLPEAKSFLDELAPYLLSVGIALGIWSDHEENEKGDVE
complement(1295..1546)             PHAGE_Bacill_Waukesha92_NC_025424: peptidase; CN641_17055; phage(gi712912405)        7.27e-36            BacilluspseudomycoidesMRKLPEQENHDDFTKVIIGLTRVETKIDGLGNVRELAIEAQQSAKSAHLRVDRLDRLVFWMGTTVIGSLIAGSITLLFKFAGK
complement(1565..2071)             hypothetical protein; CN641_17060                                                    N/A                 BacilluspseudomycoidesMANNSNEVNQAVVEEGIKEVRRRFGLIPGFFSEDKEAGAIFLNKGNYESSIWMDGEGLFYEDDVPWEELIITNAVADTDTPPMLRRHGNWVHMTGAIRLVKNQQVFTRITPDIAPRQDSYFSATAYLDNDPNRPVAADVIVHADGRVSTYLPESQTRYVSFSLSYPIK
2133..2144                         attL                                                                                 N/A                 TTTTTCTTTTTC
complement(2225..2470)             PHAGE_Bacill_phIS3501_NC_019502: phage protein; CN641_17065; phage(gi422934341)      4.16e-39            BacilluspseudomycoidesMDERCERMEDVYKKIDSLKTEQKEIMRDIRNLETRTTINEKDISTINRQLEKISINTTWILRIVISAIVMAVLGLIIKGGI
complement(2595..3992)             PHAGE_Bacill_phBC6A52_NC_004821: hypothetical protein; CN641_17070; phage(gi31415863)     1.23e-44            BacilluspseudomycoidesMRNEVITIDLADPVFTKTIRSRQNDKNGLRLTVYLKDNGRVVDLTGYVAKYEATNNKGQFIRDDAKIIDVSSGIIEYILPPKAVSTPNEWMAYFVIEKGDSERTSTPDIRIVLRRDVKEGNIKMESYISDFEKALEQVAGYRKEIDDTNKQIVELTKLINANNVQVPKITTDVGGALISVGDPTKNILDEIVARGLGINTIYCHGSVQGNTPNAKSWRGISFVNSPTYGFIFAKDYQNKLWTNYIDDAKGWLGWVEHPSFEDVKKLFSLWGFDEKRLLLNGKSILEEETDALVISKDSKYKKVKVEADLLIHNKLQTPSNAAVWFHKEKRYNSGKWIVEFNDKPRWGFNRSVDRSGGLFHIKESGIYDIHAYLSALAQTADAEHILEIHILDASGKTIEEHEIAGEITGYVSKWVRMTGSFQWYFTAGQKFKVVYNNKDKDQIYVWEARTTVTQLSKGLDENNAV
complement(3989..4954)             PHAGE_Bacill_phBC6A52_NC_004821: hypothetical protein; CN641_17075; phage(gi31415862)     8.91e-94            BacilluspseudomycoidesMFLGYYINSRKEMQPTIFLGGNDDITASQGAVAIYQQSDSYPKAGGIGITRGYISGSKTDLYFPANIFFDQNGKMIIKAEDSLNIDALYSYMNLTAATDFAAKSKKNLMLEATEENMHFTAGKGFLFHQNGKRIFSVKTSSSGDTDLVLQYSLLRNSNSANGYLQVMSGTGSFYGGILAADFKVSSKKKYKTNIRDIAFSALDKIMNWDIKQYNLKTDMAKLYDMRMNRNEGEPPITTDAIPTHYGLVIPNEEEETGVGLYGMLSQLTKGFQEYVTKTDARIKELEPIQPKGNIRYRNRPKRNRKLPRYLKKGAIERSVTK
complement(4986..5159)             PHAGE_Lister_2389_NC_003291: Clp protease; CN641_17080; phage(gi17488507)            4.80e-09            BacilluspseudomycoidesMTVTEIPKIKNRFEVLNSANTEEADLYMYGTISAYSWYDGISSSKVREQLKNITAKTI
complement(5119..6318)             PHAGE_Lister_LP_030_2_NC_021539: portal protein; CN641_17085; phage(gi514051935)     1.12e-113           BacilluspseudomycoidesMGLIDWIGGWFGKRSRADLKSCFYEASIDYFFKKLAVNTCVDLIANTLVRCEFQTFEKGIEVRKGNHYLFNVQPNQNQNASQFMHSLVSHLIYDNECLVIMHNDQLYIADSFSKEEFALKENIYKGVTVKNFTFTEKVFKESEVFYFQLNDENIMNVIDGLYSSWGKLITSATSIYKRSNAMRVVVKGEFLRAQTPEMQQQMDAMFNEQFKAFFEADNAGAVFQLQDGYTLENFSNTSKGNKLDSRDIKALVDDIIDFVSMAFHVPKGMLKGDVVDVSKQTDNFLMFCINPLIELIADEINRKFYKKEEYLERTYLKVDTSRIKYVDITQLASACDVFFRIGANSINDILRMLGREPINEEWANKRYVTKNYESVENAAALGGGDENDSNGNSENQKSI
complement(6335..7987)             PHAGE_Lister_2389_NC_003291: terminase large subunit; CN641_17090; phage(gi17488505)     1.71e-175           BacilluspseudomycoidesMTKTYNYHPYINDYMRMVENGEIQACKEQKQLMEFLRWKLDQPNVVIVAEAIEKSVSVPAPYFPFELFPWQKFCNAFIFGVRYDDGRLMFDRFLNLLGRGAGKNGWMGYDSFFMLTSHHGIPNYDIDIVATSEDQAKTSFEDVYNVLDDPKHKKKMQKNFYKSQTLIQHKRTKSKMNYNTSNARTKDGKRSGIVIFDEIHEYDNYKNIKVFTSGLGKKKDPRIFYISTDGYVRGGVLDDLKEEARAVLNKELPDSTLFPFICKLDDPTEVANEEMWEKANPSYRYNTSLQQKMRQEYYDMQKNSSLRIEFMTKRMNSPVEDSRKEVATYDDRLATDQPFPENLKGIDAVGGIDFADVRDFCSVGLLFKHDGKRYWMQHTFIHHMALKLQDINPDIIEIAKEKGLCTIVYDKSIDADRVVNWYLEQAKIFNIKKVACDSFRASILEGKFKETGIPLEIVRRGPITHAKLAPLIDEMFIKQLIVFGDDPLMRWYVGNVYVDEKGNGNKEYCKIDKEKRKTDGFFALTHALTQDSELTEAKPFSVGAFKVRTY
complement(7971..8483)             PHAGE_Clostr_phiCD6356_NC_015262: putative terminase small subunit; CN641_17095; phage(gi326536848)     1.57e-38            BacilluspseudomycoidesMNNNATPQEAAHSDYLSGMKYKDIAEKYAVSINTVKSWKKRYGWQREGAHKVQKVAPKKTRVHTKPKPKINKLKETIKQDLMNQLEENGTFGAHYTDLVSDYMALWDIKNNLILDIEERGVVVDWSNGKQRGKKKNESISELNKTNAQMLKLLAELGLKATEVDKDDEDV
complement(8674..8982)             hypothetical protein; CN641_17100                                                    N/A                 BacilluspseudomycoidesMIIVDGSWTFDTDLMIQYTDKEERTSYERDMLNQFRKYSYWRYCQIRDCVNPRKCKRLKLIDVRERSQDEEKLKFTIDILKISSEEVFFILDFIETYFELVS
complement(8985..9179)             PHAGE_Lister_LP_030_2_NC_021539: HNH homing endonuclease; CN641_17105; phage(gi514051998)     2.46e-15            BacilluspseudomycoidesMCKSKGKYKPAENVHHLKEVKTHPHLALDLDNLQCLCIRCHNEVHDRLDKIEKKKLKFLNEERW
complement(9293..9535)             hypothetical protein; CN641_17110                                                    N/A                 BacilluspseudomycoidesMNINIESLREAFNKLAYELYKVISQLFSSYWEQIKELSAKYMEYKLERPERPVYGYVKHKVIRSQVMYRKPICVRARMVC
complement(9744..9935)             PHAGE_Bacill_Eldridge_NC_030920: head completion protein; CN641_17115; phage(gi100195)     4.09e-23            BacilluspseudomycoidesMMDEIQRFIANNTHQLGYIMEEASRKWKEQDPKGALTVGPCKGVIDSYGSYYDLLEKLACLQE
complement(10572..11087)           hypothetical protein; CN641_17120                                                    N/A                 BacilluspseudomycoidesMGVLSGNPQNEPMHYGEVFGIWSYLAAAQGAIAGYQVLINHTGDEDLKKFLENLVENDIQSEVEELKNLLKLNGVALPPAPPERPVASIETIPPGARINDAEIAATVSAGLAAGLVACSQAMGQSLREDVGMMFGQFHMKKAQAGAILLRLNKKKGWIIPPPLHVLQSEQA
11433..11783                       GNAT family acetyltransferase; CN641_17125                                           N/A                 BacilluspseudomycoidesMKKKLSSILGALLLTIMVFGTSVHAEYDGYNTDRVNNNNITTRVNDNNMNRVNYDTRTQVNDNNMNRVNYDTRTRNVNTTNDLNNNRKNNNWAWLGLLGLLGLFGLRRKEKEPERR
complement(12146..12688)           PHAGE_Bacill_phBC6A52_NC_004821: DNA integration/recombination/invertion protein; CN641_17130; phage(gi31415840)     2.34e-114           BacilluspseudomycoidesMNFVQPIREPEQIQQIKEYLKENNERNYILFVMGINTGLRISDILKLRVGDLKGSHISMREKKTGKQKRIQLTPALKRELRWYIEERDDNDYLIKSREGKNRPIGRSMAYKILRSTAAEFGLDEIGTHTLRKTFGYHMYMQTKNIALLMEIFNHSSERVTLRYIGVNQDAMDKAMTKFKI
complement(12685..13155)           PHAGE_Bacill_phBC6A52_NC_004821: hypothetical protein; CN641_17135; phage(gi31415839)     1.31e-66            BacilluspseudomycoidesMTQLTFLPKIDRKATQSRLEEVLENVRIYRQFGMIRNEMKVTASGEIRYHGPTNVVGKPAEDVALANIGLSIREERLKRLSFQIDKALSRFSKNQRDIIIKRYLEDEEVFDYMVYNEIGMSERTYRRNKSNAFYKLAFALRLEAYEVEKHYGGGDL
14824..15306                       hypothetical protein; CN641_17140                                                    N/A                 BacilluspseudomycoidesMDKMNDRSSRRWQMQQKLRALKTKNRNNTNPLFNECLESLGDETLIFSQGKSQQIATNLIKSFPITVSGKIDWEQIDNQLVVPNKERLISLIRAHKLDFNEQIFILWDNYEIPVVGTNLDNVFQSLADVDAVSFYYWLLDKEYRFVIEIEDEEMIRVGFR
complement(15359..15550)           PHAGE_Bacill_phBC6A52_NC_004821: hypothetical protein; CN641_17145; phage(gi31415831)     6.58e-09            BacilluspseudomycoidesMAIIKENIAEMKAEISLVENMIYVVKDGQVHPIEPPTSGHGEQSFVYKSGKVTRMDERKTQLI
complement(15627..15989)           PHAGE_Bacill_Waukesha92_NC_025424: hypothetical protein; CN641_17150; phage(gi712912380)     8.38e-22            BacilluspseudomycoidesMSKQLTIFDVEPIVAFDPKKAHIQLVNSQLRFADVIVKIPRQAKAVDELKLTTAPDDRYELFEDYTIGIWRYKRAGNKQFDYEEAEELCKEARDKKEPISIRLHLSLEQSFVPENVVQYL
complement(15964..16152)           hypothetical protein; CN641_17155                                                    N/A                 BacilluspseudomycoidesMLLRQEVERRRLLIIRKLLGLGLTEINGQTLDKLTLTQLEGILKTGLQVLEEKDNVKAVNHI
complement(16152..17474)           PHAGE_Geobac_GBK2_NC_023612: helicase; CN641_17160; phage(gi589893809)               1.31e-142           BacilluspseudomycoidesMSKGIIRNVEAEQSVLGGIIMEGDLIKDCQLKPNQFSLPTHQAIFKAMRELEDAESPIDLVTVVEKLDSFINQIGGIQFLVNLAEGVSTTKNFSYHESLVIEAWKMRHAQEVAGDLYKRLQKDKDISAISNTIDELNAIEETGYSGEFDLKETLVDLYKKMQIDVGDLTGINTGYNDLNRMTSGLQTGDLIIVGARPAMGKTAFVLNVAYHAADSNTVVGIFSLEMGEEQLLKRMISSAGNVDATKMKNPKKLCSIKDWESISQAMGLINNLPMEIYDKANVTMQEIYAKTRKLKRKHPDKKALIAIDYLQLIVGDPKHRGNRMQEIGEISRKLKLMARELDVCVVALSQLSRAVESRQDKRPLLSDLRETGQIEQDADLIAFLYREDYYDTETENKNITEIILAKQRNGPVGTVELAFIKEFSKFINLERRYDNQQEAQ
complement(17474..18409)           PHAGE_Deep_s_D6E_NC_019544: replication protein; CN641_17165; phage(gi423262361)     1.88e-67            BacilluspseudomycoidesMAVFRPVQVSFWQDAKVIEEMTPEDKLFNLYLLTNPCTTQIGVYQITKKQMAFDLGYSMESINALLDRFENHHKLVKYNPETRELAIINWGKYNLNRGGKPIEDCVRKELNGVTDISLISLITPKVKNDKIRAIFEDFLAVNDTCHDTSTIRREKEEEQQEEKEEKEEEQQQECANEVVEINPISFYEQNFGFITPFIAEGINAWVDDLNAELVVKAMEIALEKNTRNMSYVNTILRDWHLKGLKTVTDVEVADKAFRDKRSAQAKQQPVYQSAAMSESTKQVLQQQESWKQNIPTDEELAALNQQNGWMQ
complement(18411..18590)           hypothetical protein; CN641_17170                                                    N/A                 BacilluspseudomycoidesMFLDKTLHRVLLNPKIVQQVTSEQHLAYLLVQQYLKKGYKNYRLLRIEDGFAICKREDE
complement(18694..18978)           hypothetical protein; CN641_17175                                                    N/A                 BacilluspseudomycoidesMITEYNCLHDLVLLGDFSFANELHDCMNTCIYNMFNAKSHEEANFWEEELNRCVKEFKMLRNVKEEHEVSKSYCVIMKGSCSKGVNASLVSRRK
complement(19159..19380)           PHAGE_Geobac_E2_NC_009552: hypothetical protein; CN641_17180; phage(gi158380391)     4.65e-05            BacilluspseudomycoidesMTVDYKNPSLREYKELIRYDAKLTGEIKIAKTFGDDKKSGELQQEKKLVGIRINIIEASFTLKHKWAKEKATA
complement(19395..19982)           XRE family transcriptional regulator; CN641_17185                                    N/A                 BacilluspseudomycoidesMGTSIYCNSSIGGLLRNARECCENAHYRTKKGLAEYLGITYERLKNIESGFSKVPFELAMDWCDATGAPLNKQAIKHIYGVGLPPTDPRLTSDVNLQLMNYIKQAEEGIAAAKEIMNLQITTRSWKLDEKKKHEYAVHAKEIFDTIQATQCVVQALEQVHFGIMEQIQKSWLQKAMSENVIIQSVDSLMTLTKVL
complement(20073..20321)           hypothetical protein; CN641_17190                                                    N/A                 BacilluspseudomycoidesMSALPMAVPTDQQHTNVKSTSRGDIMSQQEEYAASYEFGKTKVYVVAPEPKPQKEIDKILQAYYEAGWAIIKEMQAKESIED
complement(20387..20602)           PHAGE_Geobac_GBSV1_NC_008376: repressor protein; CN641_17195; phage(gi115334659)     1.29e-08            BacilluspseudomycoidesMIGPKEMRMKFGISIEEAAKNIGISGGYLSQIENGQRQVSAERADQIAKLYGKKKEDIFLPTRYSVCKVLE
20765..21136                       PHAGE_Geobac_GBSV1_NC_008376: immunity repressor protein; CN641_17200; phage(gi115334658)     1.41e-18            BacilluspseudomycoidesMIGENLRKLRKTNNLTMKELGQKLNLAESTISGYENGNRKPDYDTLNKFADFFEVSTDYLLGRDITKNTTRDTYTYNPLTDPDLGLWFKDIKDASPDKQEELKQFWEFIKSKEKNRKPGDKQN
21304..21828                       hypothetical protein; CN641_17205                                                    N/A                 BacilluspseudomycoidesMHKTQPYYTTQIEDYIKNLYHSLSIFIPEQIDMITIAQKLNIWLHFAPFGSRAICKNNLPSIIIDNNMAYQQWEDFGHELCHVLFHVGNQLYIPKLFLDYQEAKANNFKLHFCIPTFMLRTLNLPETRKESIYLIAKTFNVSFHTAEQRLLHYENQLLASHLLNVFSQTCLIT
21923..23470                       PHAGE_Thermo_THSA_485A_NC_018264: Recombinase; CN641_17210; phage(gi397912662)       0.0                 BacilluspseudomycoidesMKTAIYLRKSRADLEAEARGEGETLAKHRTTLLKIAKELNLDVLSVREEIVSGESLVKRPEMLALLEEIEDNKYDVVLCMDMDRLGRGGMKEQGIILETFKRSNTKIMTPRKTYDLNDEWDEEYSEFEAFMARKELKIITRRMQRGRIASVEAGNYLGTHAPYGYDILRLNKRERTLTINSEEASVVRMIFEWYANEDMGASVITNKLNQLGYKSKLGNDWNPYSVLDMLKNNIYIGKVTWQKRKEVKRPDATKRSCARQDKSEWIIADGKHDPIISKSLFEKAQEKLNMRYHVPYNTNGLKNPLAGIIRCGKCGYSMVQRYPKNRKKTMDCKHRGCENKSSYTELIERRLLEALKEWYINYKADFAKNNQDSLSKEKQVIKINQAALRKLEKELLDVQKQKNNLHDLLERGVYTVDMFLERSNVVSDRMNEITEMMENLQKEINTEIKKERVKKDTIPQVEHVLDLYFKTDNPKKKNSLLKSVLEKAVYTKEKWQRLDDFKLVLYPRLPKDGDK
24874..24885                       attR                                                                                 N/A                 TTTTTCTTTTTC
