gi|00000000|ref|NC_000000|  Vibrio cholerae TM 11079-80 VIF.Contig78, whole genome shotgun [asmbl_id: NC_000000].107548, gc%: 47.98%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
complement(82838..83785)           PHAGE_Prochl_P_SSM7_NC_015290: PRGA-formyltransferase; VIF_RS15325; phage(gi326784531)     3.86e-10            MSQSLRIVFAGTPDFAARHLAALLSSEHEIIAVYTQPDRPAGRGKKLTASPVKTLALEHNVPVYQPENFKSDESKQQLAALNADLMVVVAYGLLLPKVVLDTPKLGCINVHGSILPRWRGAAPIQRSIWAGDSETGVTIMQMDVGLDTGDMLKIATLPIEASDTSASMYDKLAELGPQALLECLQDIAQGTAVAVKQDDGLANYAHKLSKEEARINWSDAATHIERCIRAFNPWPMSHFEVAENSIKVWQARVETQAVSQAPGTIVQADKSGIYVATGQGVLVLESLQIPGKKALPVQDILNARADWFSVGSQLN
complement(83803..84312)           PHAGE_Synech_ACG_2014f_NC_026927: baseplate tail tube initiator; VIF_RS15320; phage(gi100217)     9.88e-15            MSVLQVLTFPDDRLRTVAKPVEQVTPEIQQIVDDMLETMYAEEGIGLAATQVDIHQRIVVIDISETRDQPMVLINPEIIEKRGEDGIEEGCLSVPGARALVPRAAEVTVKALDRNGQEYQFDADDLLAICVQHELDHLAGKLFVDYLSPLKRNRIKEKLEKIKRFNEKK
84404..85579                       PHAGE_Bacill_BalMu_1_NC_030945: hypothetical protein; VIF_RS15315; phage(gi100041)     1.57e-05            MISPKPSHFFDQGSKVMARLTRYIAYALLPFTLLSGQVTADEQTPLALKPNAPTTYTVVKGDTLWDISALYLDSPWLWPRLWQVNPEIDNPHLIYPGDKLTLFWRDGQPVLSVKPMRKLSPQVRVLKKQAVPTVQEGLVLPYLQSDRLMAKTALQGSVRVIGSSEGRQYLTKQDQLYISGVHSKKKWGIYREVAQYQRDDEVMVALRLVAVGELAMTGGNFSGLSLQEQNQEILANDIALPEIDLEERQLSTTFYPQPAPAGSEARILGSLEGSQFAGQNQVVVIDQGRSDGVAQGSMFELYQAAVQVKAKQDSSTFLSERSNTDVQLPSVKVGALMVIRPYERFSLALITNSSAPISAEVHALSPQAEPQTEQPEVVQLSEQTDLVDDVS
85579..86538                       PHAGE_Thermu_OH2_NC_021784: SMF family protein; VIF_RS15310; phage(gi526118339)      1.43e-41            MKDQDLAAWLALCFTPKLGSKTISHLLATRLPAQLQSFTPKQWLASGLKPEQLVFLTTQAAKQAEQCLQWRAAANNRYIVTPHCPLYPRLLKEISSSPPVLFIEGIWEAVHDPAVAIVGSRNASVDGRQIARQFATELAQSGLVVTSGLALGIDGYAHDGALQAQGQTVAVLGSGLAQVYPKQHQGLAERIIAQGALVSEFAPHTPPKADHFPRRNRIISGLSLGVVVVEAAEKSGSLITARYAAEQGREVFVVPGSIFNAASQGSNQLIRQGACLVQSVQQIHQELKNALTWSLSEQVPYQATLFSAVQGDEELPFPV
complement(86742..87413)           PHAGE_Lister_vB_LmoS_188_NC_028871: Cro/CI family XRE family transcriptional regulator; VIF_RS0117700; phage(gi971750830)     1.39e-06            MSIEIKADESTFGGRLKSVRTQLGLNQSQMAGQIGVSKDTLSRYERGELTPSIDVLKRIIESYSSEGVTADALLLDAKPSIPTYCVENIGWATGFNFQNGGAFEIAIGFNDLARLCEAMIVFTEMNVPLTEALLGAADALKDVNNGFEPSDDPFLEDVHEINTMSYLKVITPIAQQAASLIPTFIEGDTKKDKLVAKYMKEVGKVEQLKSEIAELKKRLKAPH
87485..87703                       hypothetical protein; VIF_RS15305                                                    N/A                 MKKVTSPLSVEQFNALKSGFVKQGTSFSRWCLEHGFNRANTKSAILGSWNGPKACELRTKAIIASGIYNELI
87720..88055                       hypothetical protein; VIF_RS0117705                                                  N/A                 MKSCKEKRAYEQIVKILSSLNVYQAKNVLDSVYRSVSFVTPEPTRIPNNYKSKIDSDRELHDFIMSLDLEFLHQKDVLLACIDKFGKKRAPSRTSLNRAWKKLLHKKGECL
88052..88384                       IclR family transcriptional regulator; VIF_RS19070                                   N/A                 MSQYKHSISGCNLKPTRLTLKLLETLVENGVEGLSLKSLGDLSGLPRASVHRYLQILVDSGWVETIGEKNSMLWKPSKHFIQLAFNYRNAVRAEVDRIGAEFRELTGEDL
88386..89357                       PHAGE_Pseudo_JBD25_NC_027992: hypothetical protein; VIF_RS15300; phage(gi100015)     8.44e-29            MSDELKQLMTAQQALSDAQELNAAEALTISQSEGTKLGEAVDLGALLGRAQMAERLSKITDAVSLSALKEIKESKKYKALKGITFSKSSTVGSNLVVLKGTWEEFCEIYGSSKSTVDERLKNLDVFGAQALESMSAIGMTTRDLRRLRQLPQEDLTAIVEGEVVKVQDRDEALEIIEELSAKHRQEKQALQSEVTKLTQEKQSNERLLADKDKKINDLSKKLDTPLSPAQARQKEEELNSKLLDQLNVATLAVDSGLARLFDAIQTIHDNPHPTDIDAACENALFHTLERFLALSADLGISAHVLSHLEQWHAENGLFLGNEG
89364..91121                       PHAGE_Pseudo_JBD18_NC_027986: hypothetical protein; VIF_RS15295; phage(gi100013)     3.44e-103           MNALELERAQYLKRLMSDLDRSGRGQKGVIVQAAMDHLCISKSKLYQELTDLGWTSGRKTRADNGDLALTKEETELLSNMIRQSKRESGKALMTVRDAVDIALANGELTRHVSESTVLRAFKRFRVHPDQLDMMETTMSQRSLFPNHAWQFDVSICVLYYLRGGKGLQVMSKDEFYKNKPKNLDRIVNERVLRYLATDHYSGAFFLRYYLAPGENTETITQFLLEAFCERDTGELMYGVPQILIWDAGSANIAHQTRHMLDMLEVKHIAHTPGRPWAKGQVESTHNLVERRFEGRLAFMTVQSIEELNRHAVQWSIGFQSLKEHSRHKNSRFGLWQTIRAEQLRLIKDVNLVKSMMQQTKPEVRKVRPNELSISFAPKGYASMDYSLAHIPHLIAGDEVKVFANPYKAPAIRVISVDDSGQEHTHEATPIERDAAGFNLLAPIIGAEHKSVRETDADHNRKRLDIQAWGTDNPRDIKKLRKGKVAAFDGRINPMADIEQQVVPSFMPRRGTVMSMEGQPLTEQKMSFIGALNRLQRRLNPTKEELAVMRKVLKQQYPDGMTDNELQVFTEQWEQKGNEHAQSATR
91051..92202                       PHAGE_Pseudo_JBD18_NC_027986: hypothetical protein; VIF_RS15290; phage(gi100012)     1.62e-57            MNYKSLPNNGSKKAMNTLRARLDKAGTSIQALADYLAMNYSTVQRAVKMNEPPKRRAEEFKEKVEAFFASHGLEGVSGWSKAATNDQPDPQTETNRELELENPMLTQEAMKHFKLFRNPFINDIRAVRDIYMNEDGRYVLAAMKDVARNQGILAVVGDSGAGKSVLRRLLLDELHNDGDISVIQPKIIDKTRATAAGICDAIISDISSEAPKRSMEAKARQVERLLMTAFKGGQRHVLIIEEAHDLTIPVMKYLKRFWELEDGFSKLLGILLVGQTELFHRLDERRHYELREFIRRCMVIEVPPLDNDIEAYLKHKFERAGCEYERIMDDSAVPALKLRLQTRRNQSGSLVYPQVINNLVTKAMNLCASLGEDKVNEDIIKEL
92205..92666                       hypothetical protein; VIF_RS15285                                                    N/A                 MNNQNDNGLLPFNVGELVSAVHFDCNDFDTADYIPSVQFRQDLHDKLGCAVSNLNSILSIYNQWKQGQLSCNWSAVSELTLRTQVVSGQFKTISQMCRNDRNGMVYNPLLNGDIPDLSKGLTPLECSELKALLDGLHPIELLQLLRHQKGSLV
92663..92896                       hypothetical protein; VIF_RS0117715                                                  N/A                 MNNHHLSAAESHELATRVSALGAKQVLLILRQIQDQSLDSSMKNRGLIYERALRTKTEAGSTAKIGHALLDHHTRPH
92808..93074                       PHAGE_Vibrio_12B12_NC_021070: F protein; VIF_RS19295; phage(gi481019167)             9.24e-11            MNEHYEQKLKQALRQKSVMPYLTIILGPTKEQCPVHTKNKGLVLPVDDRYWTEFPMRETSACRCSIRQVSKYEYQKLKAEGVLEVPVD
93480..93848                       PHAGE_Entero_Mu_NC_000929: Mor; VIF_RS15280; phage(gi9633507)                        3.72e-08            MLAVEKAIPLVVDALSKGLFSFDDIESGDALYPELLSDVHDIFLGVIEDSGIEDNGLALNLVFKLMEYGNGVQFYLPKPDSIVKTIIKKMMKNDFNGSNYVELAKRYQCSTNHVRRVINDTY
93835..94155                       PHAGE_Escher_D108_NC_013594: GemB; VIF_RS0117720; phage(gi281199660)                 2.12e-07            MTPTDNQRLLVISKLTPSAQVLYRALDEAIHQSTGKPDALKIIFDLSEQLGGRTFYFPLGGVARITQRNIDIFADYESGMSVRELSKKYKLGFNTIFTVIRKFKKS
94174..94752                       hypothetical protein; VIF_RS15275                                                    N/A                 MSLSTLQAELASAKTEYEAKELEIRNLFSEKNTQERRLQTLVAQVAAKRKELSNALSQSSAETLTSELQSLESQHQACQTLINNISNYLTVKAGLDKKNASELVERAQKNLLNFIYNSIKSELKVLTDEQVELMKDFVVIEKLIRSELSDSVRQSYFLGCVFDELYGQLKGSDFTSHKEKMLKKYDAESSIG
94807..95184                       hypothetical protein; VIF_RS15270                                                    N/A                 MKMEHVYQLVDGIVFKGKLQKQVTLHPIDSVSYDLVEQLVEEQLQHIQNQADVVLVNDSHLQGLKGYMLLNESAASSISKIGDENVDLMFFDLCQLKISAQDWNVILTANLAIAEYYANQAAMLA
95233..95592                       PHAGE_Vibrio_12B12_NC_021070: extracellular solute-binding protein family 7 protein; VIF_RS15265; phage(gi481019155)     1.37e-38            MAVMTFNLEDGFKVGDAQCHEVGLKELTPKDVFDAQLASEKIGILNGRPHAYTSDVQMGMELLCRQVEFIGNVQGPFSVKEILKLSSCDFATLQQKARELDDIMFSDDALEGLEARGRD
95727..97418                       PHAGE_Entero_SfMu_NC_027382: tail tape measure protein; VIF_RS19300; phage(gi849255272)     8.88e-29            MANNLKTDIVLNLQGDLAQKARSYSKEMTTLATRSKAAFSMISSSAIAASRGIDTFGNRLLFITGAAAVGFERTFVKTAAEFERYQTMLNKLQGSPEAGAKAMAWIEEFTQNTPYAIDEVTQSFVRLKAFGIDPMDGTMQSIADQAAMIGGTAETVEGIATALGQAWTKGKLQSEEALQLLERGVPVWDYLIKSSKELGMNNGRGFTKEELDDMSSKGKLGRDAIRALIKQMGKESAGAAKEQMNTWNGMISNMGDHWKLFQKDVMGSGAFTVLKDQLGEFLGMLDEMKKTGEYDEFVEKVGRDLVEAFKSAAAAAREIKEVGEELWPVIREIGSMANSLAETVGGYGNLAKILASIYAINKMLRIGSPLLKGGAMIGDMVLGGKKGAAGAGSLSALGATPVYVVNMPNGGLGGPDVNFPDNKKPNKSLFNASNLANITLIGWASYELADLTDSVLSSNFDGYREADAKFTTKMKAFFGDKEAQAQDVQYYGADPAKYEVKPMSPPEYMTGGYNRSPISTPSSYLAAQAGEMKLKVEVSDDRVKVTPTYLPKGFSVDPDTGIN
97520..97687                       DNA-protecting protein DprA; VIF_RS20085                                             N/A                 FPELLANVGIEATPIDILASRTQIPVQDIMMQLLELELLGHVVAVPGGYIRKGRG
97690..98166                       hypothetical protein; VIF_RS15260                                                    N/A                 MMMDILMYLFETYVHSDADLQVDQDQLEDELLRAGFHQKDIYKALHWLEELAALQQTDAQTAIAKSAPTSMRIYAPEEIERLDLESRGFLLFLEHINVLTPETREMVIDRVMGLETEEFELDDLKWIILMVLFNVPGNENAYTVMEELLYSKEQGILH
98174..98746                       DNA topoisomerase; VIF_RS15255                                                       N/A                 MSMSRKIDPQLFAAHEHALQSSPCPQCGAALQLRHGKHGPFLGCTAYPECDYIKPLHQNDGHIIKELGVPCPECGHELVLRQGRYGMFIGCSHYPQCHHIESMDSPSQEETSPDILCPECGKGHLIERKSRFGKLFYACDAYPKCKFALNSKPIAQACAQCGFTVMVEKKSAADMRYQCANRQCGHIQEC
complement(98931..99671)           PROPHAGE_Escher_CFT073: transposase/IS protein; VIF_RS0117735; phage(gi26248359)     5.75e-28            MNALNDQLKTLRLSHAAKALEQQQEQLTTYAELDFEERLSLLLESEILNRNQTKIQRLKRQAKLRVDAQPSQLIYKEGRNLNRKQMSELLTGGYLHKHQNILITGPTGAGKTYLGCALATSACDQQQTVRYYRLTRLLDDLTAGRLDGSYQKQLQSLAKKALLILDDWGMEKLTQEHAGHLLEVLEDRYQNSSTIVISQLPVKEWYNMIGNATVADALMDRLVHNSHRIELGGESMRKLAQSDHLE
complement(99682..101214)          PHAGE_Entero_fiAA91_ss_NC_022750: IS21 transposase; VIF_RS15250; phage(gi557307612)     7.83e-17            MAKKRTPMNKIKEVLRLKYDCGLSNRSIASCLKLGPSTISELLTRFKQSQLGWPLPEGCSDTELTQVLYHGKKACRDKVMPDFTQYAVELRRKGMTKMLLWQEYHEQYQEQAYAYTQFCEHFTRWFKTQKRSMRQLHVAGDKLFIDYCGPRLQVVNPDTGEVREAEVFVASLGASNYTYVEAFPSQGKSYWLEAHANAFEHFGGVPHLLVPDNLRSAVTKANRYEPRLNDSYQKLANHYQTAVMPARPYKPKDKAKAENAVLLVERWIMMRLRHQTFHTFKELNLAIRELMNDLNEREMKQYGASRKALFDKLDKPALKPLPKQRYLYTETKRAKVGPDYHIEYRRHYYSVPHQLVGHHVELEGSNRLVQIYHQGNLIAQHPRSQRERGNSTQPEHMPSNHQHQKWSPGRLLNWGANIGPATREVVNKMLNAKPHPEQAYRSCLGLLNLSKTYGESRLEQACKDALMLTKPNYTFVNNLLKNNREGQLSKDKANTPNLVHSNVRGPNCYH
