gi|00000000|ref|NC_000000|  Vibrio cholerae RC27 VIJ.Contig963, whole genome shotgun sequence. [asmbl_id: NC_000000].405372, gc%: 46.79%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
complement(356157..356363)         PHAGE_Entero_P4_NC_001609: transcriptional regulator; VIJ_RS16045; phage(gi9627517)     8.43e-13            MGQQDIGEHPMRFLKLKEVMEKTALSRSAIYRKMNDGEFPQSVSLGERAIAWVESEVDEWMDFCLKQR
356477..356953                     DNA repair protein RadC; VIJ_RS16050                                                 N/A                 MTHFPRHRYLLSQRAYEHRVLEEAAEILEQRYVRGETFARTENTTEYLRCKLAGYEHEIFAVLFLDNQHRLIEFKELFRGTVDAASVYPREVLKEALNVNAAAVIFAHNHPSGDPEPSQADRRITQRLKDALSLVDIRVLDHVVVGKSSVSFAERGWL
complement(357183..357878)         hypothetical protein; VIJ_RS16055                                                    N/A                 MTTTANSLAETVGGYGNLAKILASIYAINKMLRIGSPLLKGGAMIGDMVLGGKKGAAGAGSLSALGATPVYVVNMPNGGLGGPDVNFPDNKKPNKSLFNASNLANIPLIGWASYELADLTDSVLSSNFDGYREADAKFTTKMKAFFGDKEAQAQDVQYYGADPAKYEVKPMSPPEYMTGGYNRSPISTPSSYLAAQAGEMKLKVEVSDDRVKVTPTYLPKGFSVDPDTGIN
complement(357875..359052)         PHAGE_Shigel_Sf6_NC_005344: putative transposase OrfB; VIJ_RS16060; phage(gi41057343)     3.66e-151           MTKRTRRLFSAEFKLEAAQLVLDQNYSVTEAAQAMNVGKSTMDKWVRQLREERQGKTPKASPMTPEQIEIRELKKKLARLEEHNEIPKKSHGSLDVGLTEQFLIIKKLKQSHSVKILCEVFNVHRSSYHYWLKRPALINAETIKLRSLISEAHAASNGSAGARTIADIVTNQGVKLSRYRATKLMRTLGLVSCQEPKHRYRKASQEHIDVPNHLSRQFAVTAPNEVWAGDVTYIWTGNRWMYLAVVIDLFARKVIGWSMSLSPDSRLTGKALSMAYESRGKPKGVMFHSDQGSHYTSRKYRQLLWRFQIKQSLSRRGNCWDNAPIERFFRSLKTEWVPTVGYRSFAEAQQEITRYIIGYYCQLRPHQYNGGLTPNESERLYWENSKTVANFS
complement(359095..360135)         PHAGE_Rhizob_RHEph06_NC_027296: putative tail protein; VIJ_RS16070; phage(gi848469511)     4.34e-28            MANNLKTDIVLNLQGDLAQKARSYSKEMTTLATRSKAAFSMISSSAIAASRGIDTFGNRLLFITGAAAVGFERTFVKTAAEFERYQTMLNKLQGSPEAGAKAMAWIEEFTQNTPYAIDEVTQSFVRLKAFGIDPMDGTMQSIADQAAMIGGTAETVEGIATALGQAWTKGKLQSEEALQLLERGVPVWDYLIKSSKELGMNNGRGFTKEELDDMSSKGKLGRDAIRALIKQMGKESAGAAKEQMNTWNGMISNMGDHWKLFQKDVMGSGAFTVLKDQLGEFLGMLDEMKKTGEYDEFVDKVGRDLVEAFKSAAAAAREIKEVGEELWPVIREIGSMACSGIVNLVT
complement(360270..360629)         PHAGE_Vibrio_12B12_NC_021070: extracellular solute-binding protein family 7 protein; VIJ_RS16075; phage(gi481019155)     1.46e-38            MAVMTFNLEDGFKVGDAQCHEVGLKELTPKDVFDAQLASEKIGILNGRPHAYTSDVQMGMELLCRQVEFIGNVQGPFSVKEILKLSSRDFATLQQKARELDDIMFSDDALEGLEARGRD
complement(360678..361055)         hypothetical protein; VIJ_RS16080                                                    N/A                 MKMEHVYQLVDGIVFKGKLQKQVTLHPIDSVSYDLVEQLVEEQLQHIQNQADVVLVNDSHLQGLKGYMLLNESAASSISKIGDENVDLMFFDLCQLKISAQDWNVILTANLAIAEYYANQAAMLA
complement(361110..361688)         hypothetical protein; VIJ_RS16085                                                    N/A                 MSLSTLQAELASAKTEYEAKELEIRNLFSEKNTQERRLQTLVAQVAAKRKELSNALSQSSAETLTSELQSLESQYQACQTLINNISNYLTVKAGLDKKNASELVERAQKNLLNFIYNSIKSELKVLTDEQVELMKDFVVIEKLIRSELSDSVRQSYFLGCVFDELYGQLKGSDFTSHKEKMLKKYDAESSIG
complement(361707..362027)         transcriptional regulator; VIJ_RS16090                                               N/A                 MAPTDNQRSLVISKLTPSAQVLYRALDEAIKQSAGKPDALKIVIELSEKLGGRTFYFSLGTVARRTQRNIDLFADHESGMSVRELSKKYKLSFVSVFNVIRKFKTS
complement(362014..362388)         PHAGE_Entero_Mu_NC_000929: Mor; VIJ_RS16095; phage(gi9633507)                        5.66e-09            MLAIERAIPLVVDALSKDSGLFSFDDLESGDALYPELLSDVHDIFLGVIEDAGIEDNGLALHLVFKLMEYGNGVQFYLPKPDSIVKTIIKKMMKNDFNGSNYVELAKRYQCSTNHVRRVINGTH
complement(362790..363056)         PHAGE_Vibrio_12B12_NC_021070: F protein; VIJ_RS19650; phage(gi481019167)             9.24e-11            MNEHYEQKLKQALRQKSVMPYLTIILGPTKEQCPVHTKNKGLVLPVDDRYWTEFPMRETSACRCSIRQVSKYEYQKLKAEGVLEVPVD
complement(362968..363201)         hypothetical protein; VIJ_RS16100                                                    N/A                 MNNHHLSAAESHELATRVSALGAKQVLLILRQIQDQSLDSSMKNRGLIYERALRTKTEAGSTAKIGHALLDHHTRPH
complement(363198..363659)         hypothetical protein; VIJ_RS16105                                                    N/A                 MNNQNDNGLLPFNVGELVSAVHFDCNDFDTADYIPSVQLRQDLHDKLGCAVSNLNSILSIYNQWKQGQLSCNWSAVSELTLRTQVVSGQFKTISQMCRNDRNGMVYNPLLNDGIPDLSKGLTPLECSELKALLDGLHPIELLQLLRHQKGSLV
complement(363662..364813)         PHAGE_Pseudo_B3_NC_006548: putative transposase B subunit; VIJ_RS16110; phage(gi56692579)     6.32e-53            MNYKSLPNNGSKKAMNTLRARLDKAGTSIQALADYLAMNYSTVQRAVKMNEPPKRRAEEFKEKVEAFFASHGLEGVSGWSKAATNDQPDPQTETNRELELENPMLTQEAMKHFKLFRNPFINDIRAVRDIYMNEDSRYVLAAMKDVARNQGILAVVGDSGAGKSVLRRLLLDELHNDGDISVIQPKIIDKTRATAAGICDAIISDISSEAPKRSMEAKARQVERLLMTAFKGGQRHVLIIEEAHDLTIPVMKYLKRFWELEDGFSKLLGILLVGQTELFHRLDERRHYELREFIRRCMVIEVPPLDNDIEAYLKHKFERAGCEYERIMDDSAVPALKLRLQTRRNQSGSLVYPQVINNLVTKAMNLCASLGEDKVNEDIIKEL
complement(364743..366500)         PHAGE_Pseudo_B3_NC_006548: putative transposase A subunit; VIJ_RS16115; phage(gi56692580)     7.50e-109           MNALELERAQYLKRLMSDLDRSGRGQKGVIVQAAMDHLCISKSKLYQELTDLGWTSGRKTRADNGDLALTKEETELLSNMIRQSKRESGKALMTVRDAVDIALANGELTRHVSESTVLRAFKRFRVHPDQLDMMETTMSQRSLFPNHAWQFDVSICVLYYLRGGKGLQVMSKDEFYKNKPKNLDRIVNERVLRYLATDHYSGAFFLRYYLAPGENTETITQFLLEAFCERDTGELMYGVPQILIWDAGSANIAHQTRHMLDMLEVKHIAHTPGRPWAKGQVESTHNLVERRFEGRLAFMTVQSIEELNRHAVQWSIGFQSLKEHSRHKNSRFGLWQTIRAEQLRLIKDVNLVKSMMQQTKPEVRKVRPNELSISFAPKGYASMDYSLAHIPHLIAGDEVKVFANPYKAPAIRVISVDDSGQEHTHEATPIERDAAGFNLLAPIIGAEHKSVRETDADHNRKRLDIQAWGTDNPRDIKKLRKGKVAAFDGRINPMADIEQQVVPSFMPRRGTVMIMEGQPLTEQKMSFIGALNRLQRRLNPTKEELAVMRKVLKQQYPDGMTDNELQVFTEQWEQKGNEHAQSATR
