gi|00000000|ref|NC_000000|  Clostridioides difficile 6503 contig_1, whole genome shotgun [asmbl_id: NC_000000].154650, gc%: 28.83%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

#### region 1 ####
126141..126152                     attL                                                                                 N/A                 TAAATTATAATA
complement(130679..131797)         PHAGE_Clostr_CDMH1_NC_024144: putative integrase protein; CDF6503_RS0100555; phage(gi640884898)     0.0                 MNIKSAFIRKRGGKFHVYVEYVEEETGKKKQKSYGSYEKKKDAEKHLIEIKSTINNNKFIAPNKITLVERCYKYIIANEKNWSPYTTVNRKSWVNNYIEPFFKDIKLIDINPSLLQFFINKSFNNSTSSSAKVRYNFLSSVLKEAYRLKEISENPCDFVKLPAQNVTYEIEIYNREETLLLIEKLKDSLIEIPILLMLLLGLRIGEVAGLRWSDVDLDNSIININQILIYANSKITFKEPKTAKSKRTLSVPKELIEKLKIEKLKQNKMKLQGTLINENNLVCLNTNFNAWIPTALSKTFHNFIKRNNLRNIRVHDLRHTNASLLLLGGTNMKVVSERLGHTDIKITMNRYSHVLEEMDKEASDNLSKLLFK
complement(132196..133239)         PHAGE_Strept_phiARI0460_1_NC_031913: hypothetical protein; CDF6503_RS0100560; phage(gi100050)     1.75e-34            MFENEELLESFNIPIIDKDRQYWLVRTDGGDLWEQFKVESFIGIGWNEFSDENEFAQIEKNKDLEWELKDKIRKEYKVDKPGLIINSIKRFVTQMKIGDIVMIPSDRSTIISFGEITSDLCLHELTEEDINEEKCDYVKRRNVKWIKDIYRDDLDPLLFKMFQAHHTIVNACNYADVIDRTLQSLYIKDGITHLKVDVKTQQKVGKNLFMLQKMFFDSELDVSNCVKMKINVQSPGFLEIITTHIWDIIKILLALNVAVGGGKAFGFEVPGLMSILEKIYEKKKESKKIKFEEEMEIYKEIKDIYGDDIKTLKIETSNIVLSEMIKINKSLNPEVSTDESNDDENNA
complement(133919..134266)         PHAGE_Clostr_phiCD119_NC_007917: RepR; putative repressor; CDF6503_RS0100565; phage(gi90592681)     2.03e-29            MNFGQRLKEIRVQKNLTGEELGKILNVTKVAISNWESGRRFPSQNILISIADYFNISLDFLLCRTNIKQNFFHDEYNQENLEKIMLLFNELSFDSQEIILKTTTAFLEKENNTSK
complement(134299..134700)         PHAGE_Clostr_phiMMP03_NC_028959: putative repressor; CDF6503_RS0100570; phage(gi971820259)     2.87e-50            MFAKRLKELRIDAGLKQSELAQKLDISPSTIGMYEQGRRSADQETLLKISDLFDVSTDYLLGKTNVRNNLFINKNGRDYDAENFETEKELIENMYLDENMRKVFNVFSELSEDAREKALKVAELFLLDEKNKK
134853..135074                     PHAGE_Lactob_PLE3_NC_031125: hypothetical protein; CDF6503_RS0100575; phage(gi100037)     4.06e-07            MYNSLVDFRNSKRMTQKEMAKKLGLTLTLYSKIELGIRNPSYNFLMKFKKAFKEVNIDEIFFENKSHEKCIRR
135080..135847                     PHAGE_Clostr_phiCDHM19_NC_028996: putative regulatory protein; CDF6503_RS0100580; phage(gi971763920)     3.43e-108           MNNLQTIKEQELLGKEFKVYGTLENPLFLARDVAEWIDYSKTSEGYYNTSKMLMSIDEDEKVTITNSNSGGNKLFLTEDGLYEVLMQSRKQIAKQFKKEVKKILKEIRKTGGYIHTTEDMSDDEIMARALQVAQRKIESKNRELEEKNRFINQIASSKNSLLVREVAKVISKSNGIIIGEKRLYEKLRVWGLVFKNSTEPKQFAVEKGYLETVEGTRETSTGVFTYRTTRVTGKGQEYILKRLLKEEEEQLSLLS
135865..135876                     attL                                                                                 N/A                 AAAATTAAATAC
135931..136311                     PHAGE_Clostr_phiMMP03_NC_028959: hypothetical protein; CDF6503_RS0100585; phage(gi971820266)     1.05e-82            MKNNTSDSKVKYFCKCPYCGFDNEVEVKKGSKPKTCCICTKEVEYEKLEQQSALENTEIKGVCNQMKIKKLALATGEVFENIELKEFENKGECLPSNMVKVIDGKQELLINKEFILSLEVKRKTTF
136512..136709                     PHAGE_Clostr_phiMMP03_NC_028959: putative repressor; CDF6503_RS0100590; phage(gi971820268)     1.60e-38            MAINDNINKILKDRDLKAWKLAKEIGVDSGNLYAILRGENKNPTIDTLIKIADYLDVTLDELVGR
136726..137055                     PHAGE_Clostr_phiCDHM19_NC_028996: putative repressor protein; CDF6503_RS0100595; phage(gi971763925)     4.02e-65            MSVALQFIDTKDLVQELMQRDDTTDIIKMFLDREGIKRMNLVTLKEFKEYLKVSDVTARNMIKEAEAQNLYTVIKVGVSYRVDLISFEEYVMKNVLKDRDVMKKRKGVI
137183..137377                     PHAGE_Clostr_phiMMP03_NC_028959: hypothetical protein; CDF6503_RS0100600; phage(gi971820271)     4.81e-25            MKIIYKNKVYKVEQDKKLFRITYYDEQKNNRKFNNNKKVKRSVLTRDIELVNLYLPSKLKIKGD
137380..137696                     PHAGE_Clostr_phiMMP02_NC_019421: hypothetical protein; CDF6503_RS0100605; phage(gi414090419)     9.57e-16            MKSLIIVRNSVEQQLNRANLEINKNEQLYTKLRKKKKEIYKTLHVMLEKKVTKDKYLLSHYKLIHKLKKNMKKARITRYLNFQKNLKEIDLMFRYAA
137779..138288                     PHAGE_Clostr_phiMMP03_NC_028959: hypothetical protein; CDF6503_RS0100610; phage(gi971820277)     1.58e-109           MSTLYELTTDLLEIEEGLTEITGNETEKLEEIKEIIKQEIQDKNTRIVSVILNIDSDINSIDSEIKRLQELKRVKKNTLDRLKNNIKECMELLGTKKVETVLGNISIRKSAGSLVIEDEEKIPAIYKTVEQVVKVDKNTIKDFIKKGHEVEGCRIEYGTTLTIPKAKKE
138298..138921                     PHAGE_Clostr_phiCD505_NC_028764: putative phage essential recombination function protein; CDF6503_RS19085; phage(gi971819888)     2.85e-138           MEINNIYIKLMDVRVKFSKLNLKKSGENKFANFKYFELADFLPQATGLLEEAKLCPIVTFTNEYATLTLINGENPSEQIVFTSPMRDLQLKGSNELQALGGIETYQTRYLYIQLLNITENDSFDAVSGKEESKSKSNNTQQGKNTSERILTDKQLTRLYAIANSVGVNKTLLKEQVFKQLGKDIKDLNKSEYDAVCTAYEKQAFKGA
139435..139836                     PHAGE_Clostr_phiMMP03_NC_028959: putative DnaD; CDF6503_RS19090; phage(gi971820279)     1.27e-14            ICEEQGKNELKEFKKLYEENIGVVYPVTAEWLIEISSDVDIRLFKSAIEICAEKMNMNIAYLKGILKKWKDANITTYEQLESYRLQQENKKSKKVVNNQLSKNKFANFEQTFTKYTENELDNIIKKSQDAKFK
139896..140069                     PHAGE_Clostr_phiMMP01_NC_028883: putative phage resolvase/integrase; CDF6503_RS0100625; phage(gi971820026)     7.94e-30            MARIYAQKCGSLDIQDRLELLKLLGKAGYTVRIGKEKQNSKTTYTYFVEYTEEQEEK
140085..140492                     PHAGE_Clostr_phiMMP03_NC_028959: Single-stranded DNA-binding protein; CDF6503_RS0100630; phage(gi971820281)     1.82e-96            MNTITLVGRLVADAELKYLPNSGTPKITFSMAVDRRFKDKNGNKITDFIQCEQLGKHVENLVQYLVKGKPIYAVGELNIYNYKDENGCWKSITKVNVNALELLSSKNDNNAKQEYVPPGLDPQGFQAIDDDDIPF
140561..140782                     hypothetical protein; CDF6503_RS0100635                                              N/A                 MRFEIGKTYKFDREKFIACNGIEHYKRCEELWIEDVEGVEFTVEKTFDDGYVCYPNEFQFNFGVISEWCVEVK
140800..141057                     PHAGE_Clostr_phiMMP03_NC_028959: hypothetical protein; CDF6503_RS0100640; phage(gi971820282)     5.62e-50            MIIIRSQDKTDLVKADWINVDKEYVYAVFGEINNFKEIGKYEDEKRAMQVLDNIQRFIEGGTRTDSIDSYKVRSYRNRIFQMPIK
141071..141424                     PHAGE_Clostr_phiMMP02_NC_019421: hypothetical protein; CDF6503_RS0100645; phage(gi414090427)     1.82e-78            MAKIWMDAGELLEKTIDIEDMFGCNLSKMRNKSKQKGLVGRTNSKGQGRKSKKVECTNIITGESKIFVSAVEASKYLYFTELHITRLARTGKTTKNGWKVRYIQEVSDGISKCGTSN
141408..141542                     PHAGE_Clostr_phiCD505_NC_028764: hypothetical protein; CDF6503_RS0100650; phage(gi971819892)     5.15e-21            MEQVIKLAEKILNKKKCSVNKAIDIAIKILSKYECEGMLRNESN
141529..141987                     PHAGE_Clostr_phiCD505_NC_028764: hypothetical protein; CDF6503_RS0100655; phage(gi971819893)     5.09e-78            MSLIEYRGYDFENKKWIYSKTIMWSNAVDCLLMLKEDFKWQKVCNVGICSEEWAANNQEIFEGDILKENYNPRNRSSYGIVKRDFNSIKLYLEWHYLKKFEGEWIELIDKTEIYHSRDYKVVGNEYENLEEVRAEFLERKESLENENTNAVN
142110..142289                     PHAGE_Clostr_phiCD119_NC_007917: hypothetical protein; CDF6503_RS0100660; phage(gi90592694)     2.29e-32            MRNELKDIIKLGEKYCYCPHCGNDKIGNNEGKLIVEEHTYYRECSCGFNILIDDRKDEI
142289..142618                     PHAGE_Clostr_phiMMP03_NC_028959: hypothetical protein; CDF6503_RS0100665; phage(gi971820285)     1.34e-59            MHISTIILLVIGSFIAGRVYEYRLNLNENDEVDSKLLSDVFNEISELREENKSLKEKLQEKELLFINRLIDFLHDKKVCECCIYDCKIDDIEYDCEVGIKKWLGSEVKE
142618..142806                     hypothetical protein; CDF6503_RS0100670                                              N/A                 MSELIQCDFCKKMINVEKQKYFINKEQGNTSLLRYTDIRICEDCWNLGIKNYYKNKEGAKND
142972..143220                     hypothetical protein; CDF6503_RS0100675                                              N/A                 MNKLYMCSPQGLEEVEILEETKGRFKVGRNSQFLRVINKNVLDVKSASYVASLNRDRAIKTWNDEISKEIEKLKGFLYTENI
143318..143878                     PHAGE_Pseudo_phi2_NC_030931: hypothetical protein; CDF6503_RS0100680; phage(gi100012)     2.23e-07            MPNYITNRLVIKGEEKEINEVLEFIKVDELGIGSIDFNKITPAPKWLCKRNLGREAIEEYGEENCLDEWNRKHWGTKWNAFEQKDRRSTENIIYFTTVWGDVSTLIQKIAWIFPCVEIEYSWCDENFGYNLGRYRFKDTKILEEYLPSPCTKQAYDLALNITQRTAEDYDLKFNEETNEYEHIEEW
143887..144108                     PHAGE_Clostr_phiMMP03_NC_028959: hypothetical protein; CDF6503_RS0100685; phage(gi971820287)     1.59e-19            MSKYILRWQKGLLLNERKINYSCGSIENLKKKAELLAKDDKILLVTIDKVEEVIKDTRSQKMTEYYCDGGIEI
144105..145100                     PHAGE_Clostr_phiMMP03_NC_028959: hypothetical protein; CDF6503_RS0100690; phage(gi971820288)     0.0                 MIIHKFIIHVLDKNSDTPILNDFEGRVSQDMDLFFQKKIKTVSRAKDIRTAVFNDYSNNLIKKCCEQIIYDESSFLNNSKEIAAYLFDVMKLNATLESCDLAICLYSQKDEKKVAILKLDYNNSYTHSISFEDDKFNIQMSKNEINIQETKAIKIGALIGLSGINDEYHLKVLDKDAEKEGANSKFVTEFLNATKVKDDKYKTKMFKAFVDSYISHLYSDMKQGEDVRSILLYMLREKQNLDINEFTEKAIKEDLKDSFKEHIEEKGIESFNIDKKWVEKNLKNRHIKTDTGFEIKGKMDDFEDFMKYGIRHNGNGTIDIVIKNVHFYNEK
145109..145978                     PHAGE_Clostr_phiCT453B_NC_029004: hypothetical protein; CDF6503_RS0100695; phage(gi100019)     2.77e-156           MKIGLIDVDGHNFPNLALMKISAYHKKIGDKVEFVNFFEKYDKVYKTKVFTFSDDDYTVINAKEVVQGGTGYNLQNKLPSKIEFMYPDYDLYDIKNVAYGYLTRGCPRKCSFCIVSEKEGSKSYKVANLNQFWKGQKEIKLLDPNILACSKWEELLKQLIDSKAWVDFTQGLDIRIMTEKKAEMINKIKIKRIHFAWDNYEFNTYNKLKEFRSKLNFKKQKLGVYVLTNFNTTFEQDLERIYKLKELEYDPYVMIFEKWKCHHEYRRLQRWVNNKIIFRSVDKFEDYKG
145983..146159                     PHAGE_Clostr_phiMMP02_NC_019421: hypothetical protein; CDF6503_RS0100700; phage(gi414090434)     7.56e-25            MTNKEMCKSNNLDEREVYKEFGKEICTSCTNNRRDCESKDCDTAYKNWLEKEVDNKKV
146186..146515                     PHAGE_Clostr_phiMMP03_NC_028959: hypothetical protein; CDF6503_RS0100705; phage(gi971820289)     2.09e-62            MNILLVTILLTIICVLANYVKNRIYKKSINNLKYKYSVGEKIIYHQINCYYNRMVGCEILEKCYSTKFRKRNTPLYKVKAYVGDNNTTWVIPEWRIECLATTYGEFPKY
146615..146800                     PHAGE_Clostr_phiCD119_NC_007917: hypothetical protein; CDF6503_RS0100710; phage(gi90592704)     1.43e-36            MVITEFKVTWQTTREWEKGNIYSSIFTDLEEARAFKKDEENIKENYNVKLLSRAIVEIEID
146822..147037                     PHAGE_Clostr_phiMMP02_NC_019421: ASCH domain protein; CDF6503_RS0100715; phage(gi414090436)     1.09e-09            MIHELQISSSAFKDVIKNKKQIEVEYKANFKAGDTVIFQVFRDGKFTGIEANKEIEYFVKLGNGHVELGIK
147060..147356                     hypothetical protein; CDF6503_RS0100720                                              N/A                 MLEDAKVTINLEDLDKLRKDKEELWLLKREIGKLMNVEMRCGRCSSDECEKCKTKIKVEVEKSEIKEFLFNYIYYSSSEERDWIAHECAVEEAEFYYI
147374..147817                     PHAGE_Clostr_phiMMP03_NC_028959: putative endodeoxyribonuclease RusA; CDF6503_RS0100725; phage(gi971820294)     3.68e-47            MRVNFVIDGEPKAKARPRMSTETGKAYTTEQTVLYENWIRLMYNSTVKHFFEGNVKMTVICYFDITKKDREALQKNKVNTKAYKDAIDKVEGLIRPNKKPDLDNIIKSVADSLNGIAYKDDSQIVEVVSKKYYSDKPRVEVELEDVI
147919..148755                     PHAGE_Clostr_phiMMP03_NC_028959: hypothetical protein; CDF6503_RS0100730; phage(gi971820295)     5.85e-157           MNENINREITVLGTLEIEGMKFHDIEGGFGEDKKSMSVKDIAKIHNRELKHVNELINNNIKRFKDGIDILDIKVSRSERPSYLKSLSLEMGYSNQSYANANNIYLLSERGYSKLLKILEDDKAWEQYEKIVDGYFSMRKELNNPLLSASKELQAIFMLDKKQEVLETKIENVNEKLENFMDDAPLFNIECESIVKEVKRVATKSLGGHGSKAYKNKSLRGKVYSDIYHQIKREFGVESYKAIKRCQLDKVLEIVNNYKLPIVFEDEIRLLNSQLSIVS
148898..149386                     PHAGE_Clostr_phiMMP03_NC_028959: hypothetical protein; CDF6503_RS0100735; phage(gi971820296)     5.67e-96            MDNNINKKELFKKVEGRLHHYKFLNAEIKNLELDIESKENEIFGCKAIGYGEKVSPTYAFNSSVEDEVIKKERDISRLKKIKKDKEIEKKKIENALTCLDIREEHFFKLFYNSRMKNSMVYISLEMNSDRKTCRCVRERLVYKIMDMLYPRIKENELPLFKN
149881..149892                     attR                                                                                 N/A                 AAAATTAAATAC
150093..150104                     attR                                                                                 N/A                 TAAATTATAATA
150105..150299                     PHAGE_Clostr_phiMMP03_NC_028959: hypothetical protein; CDF6503_RS0100740; phage(gi971820297)     2.12e-33            MKWKVVLMATKSILKNVDVRKKAFGRNLVSALENAKNKQEKEVVLSKKCSEVPKDKIKDIFGRF
150299..150910                     PHAGE_Clostr_phiMMP03_NC_028959: hypothetical protein; CDF6503_RS0100745; phage(gi971820298)     6.67e-144           MSGYLIVNLSNMLGELEEEEVKKILSSFSCPLNKDVEEFLKNKAIEFSKQGLASTHLVLTSYKGKPVIVGYFTLANKYFTIKRKTLSNSLARKIVKFGQYNEELRRYIIGAPLIGQIGKNYSNNYNKLIKGDELLKIACDKIKAVQLDMGGKIVYLECEDKPKLIEFYKDNGFVDFGKRSLDKDETDSLDGDYLVQMLKYLKK
150987..151175                     PHAGE_Clostr_phiMMP03_NC_028959: hypothetical protein; CDF6503_RS0100750; phage(gi971820299)     1.98e-38            MEIKKNTQDVVSERKNSLDSEFKIPASGVCYMAEFIKESREIIKELDKHFESCLDVLSKARL
complement(151155..151472)         PHAGE_Clostr_phiMMP03_NC_028959: hypothetical protein; CDF6503_RS0100755; phage(gi971820300)     4.48e-72            MSKNIDIRNLKQFQKKIERMEQNLKPDFDKIRTIILSKKFMNQHTNFDSFDELLAFGNYIVNSEEDFLAIPDNEFDLFIVKNTDFPDWQTMLDSAYSKYLESCLR
151596..151823                     PHAGE_Clostr_phiMMP03_NC_028959: hypothetical protein; CDF6503_RS0100760; phage(gi971820301)     1.36e-45            MGFEISGNLNFDSVIDDLKKEVENNPTIFTSQNVGNKFKEKCKICEKISEFEILEDGKVKCLECGTEFELNLKVE
151893..152318                     PHAGE_Clostr_phiCDHM19_NC_028996: putative terminase small subunit protein; CDF6503_RS0100765; phage(gi971763866)     3.14e-79            MAKYEYWITEEGLIKIEGWARDGLTDEQIAFNIGINVKTLYDWKKKYSNICNALKKGKEVIDRQVENALLKRALGYEYDEITYEEGQETKRVTKHVVPDTTAQIFWLKNRKPAEWRDKRDIEHSGNLGDITIKVGDEEYGD
152308..153549                     PHAGE_Clostr_phiCT453A_NC_028991: hypothetical protein; CDF6503_RS0100770; phage(gi100025)     0.0                 MAINLEINPGVFNPIYLKHQLNNNNRYQIYFGGSSSGKSFSLAQRTVLDVFKGNRNYLIVRNVQSTLKRSCLNEITKAISNFKLNEYFQVNKTDMIITCKLNNKQILFCGLDDVEKVKSITPIDGVITDIWVEEATETDYKAVKQLDKRLRGKSKVVKRLTLSFNPILKDHWLYTEYFDIWEDDKQYVEKDNVSILKTTYKDNKFLAEDDIKALENESDKYYYEVYTLGNWGLLGAVIFKNWRVEDFSDIENTFDNFRHGIDWGFADDPFAYVKSHYDRMRRKLYICDEIEAVGLLNREVAPLVSKKANRDLVICDNASPKDVAEFSDLRVNAVSARKGAGSIEYGIKFLQGLEIIIHPRCQNFKNEINKYKYKEDKNGNILPIAVDKDNHLIDALRYSLENDMEYGGISFLK
153555..154650                     PHAGE_Clostr_phiMMP03_NC_028959: putative portal protein; CDF6503_RS0100775; phage(gi971820211)     0.0                 MLNIYISETDLIKAQLKKESTFNLVKVIEHYILKHRPEKYQEGEAYYYGTANIKNKRRYYFLDGAKVDDFTKVNNKAINNYHKLLVDQKVGYSVGKPIVFNADDNNFTKLLNELLGEEFDDTITELYLNASNKGIEWLHPYINRKGEFKYVIIPAEEAIPIWDNKRQNELVAFIRFYFIEDIDGNKIKRVEYYTENEVIYFIEKGNSFVQELLYDEYGKLTEIQEGHFRVNNKEQGWGKVPFIPFKNNEKSISDLTFYKSLIDIYDNNISTLADNLDEVQEAMYILKEYGGTDLVEFANNIRYYKAIKVGSNGGVDKLEINIPVEAKKELLDRLEKNIIIFGQGVNPESQNTGDKSGVALKFLYS
