gi|376001326|ref|NZ_ADNR00000000.2| Burkholderia sp. Ch1-1, whole genome shotgun sequencing project. [asmbl_id: NC_000000].8740428, gc%: 62.44%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

#### region 1 ####
252273..252286                     attL                                                                                 N/A                 CGGCACCGGCTGGC
complement(258521..260458)         PHAGE_Parame_bursaria_Chlorella_virus_AR158: hypothetical protein AR158_C788L; PP_00252; phage(gi157953978)     2e-30               MSLYTITGAQLAFGHVALLDHADFSLEAGERVGLIGRNGAGKSSLLKIVADLTRPDDGLVTRQQNLTTVY
complement(260652..261053)         hypothetical protein Bxe_A3341 [Burkholderia xenovorans LB400] gi|91782488|ref|YP_557694.1|;  PP_00253     1e-70               MFKNTWLAGTVLAGLLAVSGVAQAASVSFVQPADGATVSNPVHVVFGVDGMKIAPAGTMTEGTGHHHLLV
261391..261582                     rubredoxin [Burkholderia xenovorans LB400] gi|91782487|ref|YP_557693.1|;  PP_00254     1e-31               VSEVIEVTEYKSWVCLICGWIYNEEEGLPEEGIAPGTRFAAIPEDWRCPLCDVGKAEFAVVEF
complement(261951..262175)         toxin, RelE family [Geobacter sulfurreducens PCA] gi|39997534|ref|NP_953485.1|;  PP_00255     3e-20               VRQQFKRKLAERLENPRVESARLSTMPDCYKIKLAALGYRLVYQVVDSTVTVTVVSVGKRERSAVYAAAI
complement(262228..262470)         prevent-host-death family protein [Pseudomonas protegens Pf-5] gi|70733660|ref|YP_257300.1|;  PP_00256     4e-16               MESILARTSIGISELKVNPTAAIEQADGPVAVLNRNKPVAYLIPALEWEAICDRLEDIELAEIVRARSGE
262794..263783                     PROPHAGE_Xantho_33913: IS1595 transposase; PP_00257; phage(gi21231554)               4e-31               VSELKHTPTAGEDFPRTWSQFLDWFATEDDCLRYLERLRWRDGFVCPSCASRDAPYRASRARLMCQSCRH
263816..264217                     PHAGE_Burkho_phiE125: hypothetical protein phiE125p32; PP_00258; phage(gi17975193)     3e-09               MFTQYTESAIVKLPEFHPPTLADLRNWWRDHRGEGDVERLILEVQYLRLVLLRLRSEADEAVRLAKEVDR
complement(264266..265057)         PHAGE_Burkho_KS9: DNA adenine methylase gp25; PP_00259; phage(gi255033757)           2e-129              MATPIVPWIGGKRRLADHLIPRFPAHDCYVEVFAGGAALYFMRPPAKVEVINDINGELVNLYRVVQHHLE
complement(265246..265797)         PHAGE_Vibrio_VP882: putative phage-related protein; PP_00260; phage(gi126010912)     2e-10               MMPLIPIAMALAQFAPMIAGWLGGAKAEDVAGKVVGIAQAVTGQSAPDAALAAIQADPALSLQFQKAVLD
complement(265794..266276)         PHAGE_Bordet_BPP_1: Bbp2; PP_00261; phage(gi41179364)                                3e-48               MSSFDDAFDALIGNEGGYSNNPADPGGETMWGVTARVARASGYPGPMKDLPRDTAKAIAKKLYWDPLRLD
complement(266263..266457)         hypothetical; PP_00262                                                               N/A                 MIQNDTVASVVKVAPPVAVSAIQAITESLPSFVLWVTAIYTVLQLYVLIRDKILRHEEGGDEQF
complement(266521..266817)         PHAGE_Ralsto_RSL1: unnamed protein product; PP_00263; phage(gi189426953)             4e-30               MTRLKLCCLWLLCALVTPILLVAMLVQALLGSAPRAQRMAVAYDECGNCLLGGEPTVTISTRTGNALIQG
complement(267034..267690)         PHAGE_Prochl_P_SSM4: hypothetical protein PSSM4_033; PP_00264; phage(gi61806235)     3e-05               MEYRIRATGAVVSEAELRAAHPDSVLPSPLTADALEFAGAVAVLEAPAPPITATQTVARNGVTQDAGGNW
complement(267699..269261)         PHAGE_Cyanop_SS120_1: hypothetical protein; PP_00265; phage(gi472343159)             2e-37               VNGSSDNYASWTFRRAPKFFDVVTWTGDGTSNRQIPHALGITPGMVTVKRRDAAGSWITRHRSATGELYL
complement(269561..270319)         PHAGE_Coryne_BFK20: gp21, tail fiber protein; PP_00266; phage(gi157168394)           6e-08               MTNQVTFPTNVGGDGSTVTDDSNATTGLANGGFRVRLLPMFTQIIAIANWILGKANAVSTNAQNAAASEL
complement(270319..271170)         PHAGE_Azospi_Cd: hypothetical protein APCd_gp49; PP_00267; phage(gi168495152)        3e-09               VANVLLAYPNLTDGSTLSGGSWQAALTNLQDRRLARVARTTDCTTPNTQFNVDLGKDRKLQVISLIAHNM
complement(271172..272662)         PHAGE_Azospi_Cd: hypothetical protein APCd_gp48; PP_00268; phage(gi168495151)        1e-28               MTIAIDVTGYRLSDGSVQILRFSDDGFMTLPSDTPANAYYEPRLSAPPHFARSLFNTALATFGAAQSTPG
complement(272659..278583)         PHAGE_Pseudo_MP29: putative tail component protein; PP_00269; phage(gi215480016)     5e-66               MPSLGSLIAKVSLDYAEFELGADRSSQAALKMGNDIERAVTRAMGSYKKSVGDMSAANDDLGVSMARASA
complement(278632..279015)         PHAGE_Rhodov_RS1: hypothetical protein; PP_00270; phage(gi472342923)                 2e-05               VARHWAGDKPDDFAADESVVAALEAAGAPSEAIDAARSQCSAEHCYVWRDNWEVFETFVALSGQWRYLMG
complement(279021..279347)         PHAGE_Synech_S_CBS1: hypothetical protein; PP_00271; phage(gi356870807)              5e-11               MAFKIAHSETYQQKIEVQLVGESGKVEKHDFKVTFKRCTNDRLEELRGKTGKEVLQEVVTGWSGVTDDDG
complement(279423..280352)         PHAGE_Rhodob_RcapMu: hypothetical protein; PP_00272; phage(gi356870885)              9e-62               MSKLTRKTLILAVIETVIGTDAVPTAALNAMLARNVTYTPTAEFASRDVMRPYLGNSEQLPSAIHGELDF
complement(280399..280746)         hypothetical protein Nit79A3_2401 [Nitrosomonas sp. Is79A3] gi|339483786|ref|YP_004695572.1|;  PP_00273     3e-14               MSLKTEVYAALAAILPNTFNVELPPNPTWPALVYTVHAQEETGWVLGGGYDLHTVTIAILGRDTDENAAL
complement(280743..281309)         phage protein, HK97 gp10 family [Nitrosomonas sp. Is79A3] gi|339483787|ref|YP_004695573.1|;  PP_00274     4e-24               MATDNLISGLQAFNGAIATLKDDMQKKVAFSAALIGANVIKREAKAIALSKGLEQTGALLNNIAVKREAN
complement(281309..281647)         PHAGE_Burkho_KS9: head-tail adaptor gp7; PP_00275; phage(gi255033739)                6e-08               MRGGKLDRRITIQRRTNSKNASGGNVAGWADVDTVWAGVNYLSGMERSATVHQGGETADARTVFTMRYLS
complement(281657..282178)         PHAGE_Burkho_KS9: hypothetical protein gp6; PP_00276; phage(gi255033738)             6e-11               MMVQVIVPPAQMPVSLDVAKLHLRVDGTVEDDLITIYLQAATARAENITGRALITQTFQERFSRCAGDVE
complement(282233..283471)         PHAGE_Burkho_KS9: major capsid protein gp5; PP_00277; phage(gi255033737)             4e-89               MPVSIQALRERRVSMSKELRNLVDNHTGSAWGAEQQTKYDELARDIESTDAEIARNQRVLDEAAHEFGRT
complement(283555..284235)         PHAGE_Burkho_KS9: protease/scaffold protein gp4; PP_00278; phage(gi255033736)        1e-39               MKNKIFSLFNQKKPEFRVSNAADGTDIYLYDTIGGWYGIAVQDVIKELKDAKGAVNLRINSPGGDAFDGR
complement(284232..285602)         PHAGE_Burkho_KS9: portal protein gp3; PP_00279; phage(gi255033735)                   7e-54               MFNPFRWRAEASLSMRAEPALQASPAPDVRNDTGAVTMVNYEELSDLLGTGTGLASVNPDQAMRTSAVYA
complement(285602..287305)         PHAGE_Pseudo_vB_PaeS_PMG1: terminase large subunit; PP_00280; phage(gi374531647)     4e-125              MSAERDEPNYVEIANSYIDDVLSDRIVACKWVKLACQRQRNDLARAEDGDAAFPYRFDIEAASRICSFVE
complement(287302..287826)         PHAGE_Entero_mEp235: terminase small subunit; PP_00281; phage(gi428781811)           2e-15               MGQRGPQPAPAALKLIRGNPGKRPINLSDGVNPEVAIPDAPRHLNKEARKEWKRVSAELEQLGLISRLDR
complement(288069..288389)         PHAGE_Burkho_KS9: homing endonuclease gp49; PP_00283; phage(gi255033732)             1e-36               VAEPGFCTEHAREQTGWVSDKRRGSRHARGYGAAWTRLRELVLKRDGGLCQPCLRARRVARATQVDHIQS
complement(288430..288717)         hypothetical; PP_00282                                                               N/A                 MHAVHSLLRAFALRSSIVDGDTGGAAASPAVAGTADDSPADKRAASATSNEHPSHQWLDEIEAEVGAWFI
complement(288965..289741)         hypothetical protein Bcenmc03_1104 [Burkholderia cenocepacia MC0-3] gi|170732455|ref|YP_001764402.1|;  PP_00284     1e-52               VIDLKEQAGVAMNVRGQFSDPIVDPKVTLGALAFANDLGRALVRMKCGQDIRPDAVRRTTLLLAQLIRRS
complement(290009..292750)         PHAGE_Staphy_StauST398_2: virulence-associated protein E; PP_00285; phage(gi509139907)     1e-46               MASLDQIAAQLAAAGHPKLPEGHPRVSDNGKPHRYGPAKKFWYSIHQVVRNGQVLGYIGAFGRWVGDDNG
complement(292920..293294)         hypothetical protein GBP346_A2726 [Burkholderia pseudomallei MSHR346] gi|237812966|ref|YP_002897417.1|;  PP_00286     2e-12               MQFRVGMACCNQYRANAGLCCDLDHQLHCASIELARLAAHAPTRVAAFLSTLLPTFPADMLLVRARQVGH
complement(293297..293632)         PHAGE_Burkho_KS9: hypothetical protein gp44; PP_00287; phage(gi255033727)            1e-16               MEMFELLIEWMEEKRQAQARDAIHALNEQFGLRATETGDAEDGDGVDAVVLGALDLARQSGVVAGEVHSA
294439..295137                     PHAGE_Burkho_BcepC6B: putative prophage repressor protein; PP_00288; phage(gi48697234)     1e-20               MERNVVPWDRIASRLSASGRRPAWLAKKLGTGTNTITNWKTRGGAPLARARDIAEVLGCSIDELMADEAT
295322..295489                     hypothetical; PP_00289                                                               N/A                 MKSYRCYYLMKGDEPSPLTPFVQLQAPDAIDAAHAAMRVTGCARVTDVVRVGEAE
295486..295704                     hypothetical; PP_00290                                                               N/A                 MKSLPDWNTAARHRWLTQEAAAEQECGTQEQSDFEQSLAFRLTLIVAVFVIGINVFQPAPAPLVVHTTHA
295714..295845                     hypothetical; PP_00291                                                               N/A                 MAKRKHHSHHKQEVPPGVVVVFLLIALVVAFAKVAPGLARHIG
complement(295842..296057)         hypothetical; PP_00293                                                               N/A                 MASVGIAGSKSFAVQRGLICLRSLFPQLGAIGEADPQRGDCIGQGAGQMAEAVFTLDVDIGYGYPLSHVG
296169..296402                     hypothetical protein BPC006_I1133 [Burkholderia pseudomallei BPC006] gi|403517795|ref|YP_006651928.1|;  PP_00292     5e-07               MVGKFVVARRPLHGSIHTLYMIMDGSTVVGTSISVPNEQDCAAALGKHRRKQAASLADTTIAKAKRKSRA
296399..296641                     hypothetical; PP_00294                                                               N/A                 MIFALLVAVATCCTAWFITGPADQRHIGYLFGLVDAVLWLFAGVSAGKLIVVIIAAFCALCFGRPFLRTR
296634..297077                     hypothetical; PP_00295                                                               N/A                 MVNDLTPICKALIGLFAVQREPLNITKVERLLPHADPEVMRDTLQMLVRTDVVRQAMRRIVYGREQELVY
297070..298350                     PHAGE_Burkho_AH2: transcriptional regulator; PP_00296; phage(gi399529067)            3e-23               MPKTSPLVLDAMIVTGNTKAAIKAAGGGSSDLWTVPPDQLHYDPRDNVRPLNQDRVRHLADLIKANGYDR
298347..298799                     hypothetical protein BPC006_I1129 [Burkholderia pseudomallei BPC006] gi|403517791|ref|YP_006651924.1|;  PP_00297     4e-26               MTVRPAISTPRPLPRKREASDKRPRLSLAGAVPAHASNDDVNSSGLAPAQAIQKDEAPLARRKPIQIDEG
298808..299548                     PHAGE_Pseudo_vB_PaeS_PMG1: hypothetical protein; PP_00298; phage(gi374531692)        1e-12               MKRTEQNLLAVHASACAFVAKQDRSLTPDVDAFWSLYLQSALTAGEAERDADDKVTVARMGYGSVAVGGC
299545..299928                     hypothetical; PP_00299                                                               N/A                 MSRAPLTSGRYVLVETNGTRQWARDQVALQSEIVQLLAQHTGLTKKRIIMALSTAQAAIETALNALLEAG
299925..300155                     hypothetical protein BPC006_I1127 [Burkholderia pseudomallei BPC006] gi|403517789|ref|YP_006651922.1|;  PP_00300     1e-19               MSLLTRAYILEKFGVRLTMGQLATLLAMSEGTIRNQVSAETFPIPTYKEGASRYAAYDAVAEYLDRMSEQ
300241..301161                     hypothetical protein RALTA_A2817 [Cupriavidus taiwanensis LMG 19424] gi|194290898|ref|YP_002006805.1|;  PP_00301     5e-65               LETRGRKLGSSSVLGRFAPAGAPMRTLGFPPELKEPLFLWRGDTELKAHPKYAEAKAGKFWSAIDLIAEV
301090..301103                     attR                                                                                 N/A                 CGGCACCGGCTGGC
complement(301201..302298)         PHAGE_Entero_mEp460: integrase; PP_00302; phage(gi428782338)                         1e-37               MASILPVGSRWRAQVRKRGQSIAKTFKTKGAAVAWAREKEVEIENGANAVEQATVTVGTLITKYREARSE

#### region 2 ####
7001925..7001942                   attL                                                                                 N/A                 GCAGATCATGGATCTGTT
complement(7002043..7003080)       PHAGE_Escher_HK639: integrase; PP_06788; phage(gi356870629)                          5e-83               MSIRKRKGSDVWHIDIRTPGGGRLRQTTGTADKKEAQELHDKLKHEAWRVAKMGERPRYVFEQAAARYLT
complement(7003301..7003519)       hypothetical; PP_06789                                                               N/A                 MTYTVATLEVSERTYREIEDKLRAAGYDHAFSHDGAIDMTHIGLVRAPRPAGPVCTCLTNQLGPHYCEVH
complement(7003516..7004142)       PHAGE_Pseudo_F116: hypothetical protein F116p07; PP_06790; phage(gi56692934)         5e-46               VKERPILFSGAMVLAMLDGSKTQTRRVVRDQATLDVAYSPIVNGGVVFNYSGTDRLMQCPHGVPGDRLWV
complement(7004139..7005020)       PHAGE_Bacill_vB_BceM_Bc431v3: hypothetical protein; PP_06791; phage(gi472437521)     7e-22               MSENSKIMTVEQCGAVGKCQSSPAGYASYLSSSSYYTPSSERVAQHALQQLEQARQKDVATHEKNLPAIE
complement(7005297..7005671)       hypothetical protein BTI_1095 [Burkholderia thailandensis MSMB121] gi|488605180|ref|YP_007917599.1|;  PP_06792     6e-05               MIAMARPHNDNSLTLDNVLSRMVPGKTYPAHVIAAKFHVPTAEIRPVLTRLVESKQVELSKAVPKALGFR
complement(7005668..7006084)       PHAGE_Pseudo_vB_PaeS_PMG1: hypothetical protein; PP_06793; phage(gi374531692)        3e-08               MKRYPGTSSAAQARYFEAVHQELGPLARQLELELAEARETLAGAAAIADTAGAEIRTLRGRALPAELTPP
complement(7006129..7006413)       hypothetical; PP_06794                                                               N/A                 MTDHTSTIGLTRAQAIAAIDDFEIVGENNASRDPTDEERFVLGEFVARLFEDVTPSPADKNAEMLRSHGL
complement(7006487..7007341)       hypothetical protein Msip34_1663 [Methylovorus glucosetrophus SIP3-4] gi|253999372|ref|YP_003051435.1|;  PP_06795     6e-06               MYVEIEKAMAKITSVTPIMEKHGKKKKRPAHSIIFEFAMSNTVLDKMDGNGLRDAFYRVPTGLSVDKKGQ
complement(7007364..7007759)       hypothetical; PP_06796                                                               N/A                 MNLQPEKFDQWAIVELFGHQRIAGRVSEQTIGGCAFVRVDVPALDNPIEGKPSIPGFTKLYGQGAIYAMT
complement(7007756..7007962)       hypothetical; PP_06797                                                               N/A                 MTITCPIRAALKRIAPHLETLSPIDREVLRPAVRAVESDVEVIHVPDRIVARIRDIAARLPKQPTETA
complement(7007959..7008312)       hypothetical; PP_06798                                                               N/A                 MSAIKHTPGPWSVGPKGGCVVSVAPIQDVPEGTGHADIEYYGGYLICESIWRKEDARLIAAAPELLNAVR
complement(7008309..7009115)       PHAGE_Iodoba_phiPLPE: gp77 putative tail-fiber protein; PP_06799; phage(gi197085691)     1e-06               MDSQNLVDLKVSHPDQAVFKSSLNALNMAKAYEIDSVDVRDLAAKELVKIVTLKKSVESQRKAITVPIDN
complement(7009081..7009689)       hypothetical; PP_06800                                                               N/A                 MTELIFDPVEHSYTVGAQRVPGVTATLAPLVDFSMVPKAVLERAQQLGTAVHRMVELDNRKDLDEDSVSD
complement(7009694..7010707)       PHAGE_Iodoba_phiPLPE: phage recombination protein Bet; PP_06801; phage(gi197085692)     1e-59               MSNAVTQSQRPSLVAKFAERYSVDPTKLMTTLKKTAFRQRNPNDEVSDEQMMALLVVADQYGLNPFTKEI
complement(7010735..7011028)       hypothetical protein Slit_1949 [Sideroxydans lithotrophicus ES-1] gi|291614408|ref|YP_003524565.1|;  PP_06802     8e-18               MNTTTEKSPVIAMDHVESSQIFALGYDAASETLAIRFKNKAGAPTSLYHYATVTPANFEALRDAESIGSH
complement(7011044..7011415)       PHAGE_Burkho_BcepMigl: hypothetical protein; PP_06803; phage(gi431809871)            7e-31               MRARCTNATNGSYPNYGGRGITVCERWKSFENFYADMGDRPAGMTLDRFPEPDGNYEPGNCRWASREEQD
complement(7011810..7012307)       PHAGE_Pseudo_AF: putative HNH endonuclease; PP_06804; phage(gi431810340)             4e-06               VRTLAQFTSRRAKFEAFLTERGAQILQPTNEWELLRFKTSRGTSVVYCNSKGGITPTGESDKAWAAFEKN
complement(7012304..7012543)       hypothetical; PP_06805                                                               N/A                 MHLINVDLRHVRTGVRLSRAELVEAQWNSLCARTARRQRDAKAALARRGVAPRVLIGSLYVPHHVAKHFQ
complement(7012534..7012653)       hypothetical; PP_06806                                                               N/A                 MDEPTKRNLDHVYGATAALGAVAVVAILILVLTWRPVCI
complement(7012735..7012929)       hypothetical; PP_06807                                                               N/A                 VSLEKIQAAIETLHAAEKALLECDSSDGSNGALAGRCAIAAVYLETSVAMAGESVRHIRIAGEA
complement(7012937..7013131)       hypothetical; PP_06808                                                               N/A                 MTESFDLVYQDRAISTPMDIQRGFYSVDAGNLDAPQCIPAGSTESIDGSDGVFHATSYQFRAGY
complement(7013124..7013468)       hypothetical; PP_06810                                                               N/A                 VLIMAEIKYTPGPWEVDTSGYRAPGRGLCVMAGDLCVAVVAGDSGKPQAENAHVIAAAPELLAIADEILN
complement(7013462..7013602)       PHAGE_Burkho_phiE125: hypothetical protein phiE125p49; PP_06809; phage(gi17975210)     2e-05               MSVLAKSLMDLRAICGGSHGALVEHLMREIAVCLIAAGVADQRKGC
complement(7013602..7013787)       hypothetical; PP_06811                                                               N/A                 MSTLQFHNLAKTESMRDAALDRDLPENVGPDEWTARELADAALWHASRMRDEIDLFDREVQ
complement(7014519..7015160)       PHAGE_Bacter_APSE_2: cI; PP_06812; phage(gi212499706)                                8e-36               VLDEVDGIDQVKLAEAAGVTKGTVNQWLTGQIKSIKLEYAVGIQERFGYNPVWLVMGKGSKKVPGIHHED
7015280..7015495                   hypothetical; PP_06813                                                               N/A                 MNLTKKQAIDIFGGNGAALGRALGITKGAISQWADELDQKQTAMVIGAAVQLGKPVPEGFIAPTEQLPAA
7015591..7015779                   hypothetical; PP_06814                                                               N/A                 VRARLDDPTYEALLFYQRLHGIESVSSAMARALKGHLLGMVGMLPAEISGVSAHPSQVETGI
7015980..7016732                   PHAGE_Mycoba_Llij: gp66; PP_06815; phage(gi109392252)                                1e-08               VCQFSCGAASAVATKIAIAQYGATRDVQIINAFLLEEHADNRRFASECEEWFARPVTVLRDEKYGASVIE
7016729..7017328                   hypothetical protein Mpe_A1836 [Methylibium petroleiphilum PM1] gi|124267025|ref|YP_001021029.1|;  PP_06816     1e-65               MKPSIAILFARADSIYKSLPGCDVWDAERDARRWPGGAPVVAHPPCRGWGRLSHMAKPRFDELNLAVFAV
7017325..7018074                   PHAGE_Burkho_BcepNY3: DNA methylase; PP_06817; phage(gi149882909)                    9e-22               MTWLDQCHFGDCRELMKAMPAAIADACITDPPYGDTSLIWDRRCAGWIDQVSRVLKPASSIWVFGSMRFV
7018071..7019102                   PHAGE_Pseudo_phi297: putative DNA replication protein O; PP_06818; phage(gi374531278)     2e-27               MNELPNPLTPADCELREFPFMPLEVKRLLSSETWVLGTGDERAAAITLWLESWHQVPAASLPDNDRMLAH
7019077..7019721                   hypothetical protein mma_2208 [Janthinobacterium sp. Marseille] gi|152983412|ref|YP_001353898.1|;  PP_06819     2e-13               MSTPAALAEPPAQQQSAWPKDAVPEHWITELFKRMHRMWGNAFLDKWRDVEMDGLKTEWAKALKKLSSTE
7019718..7019912                   hypothetical; PP_06820                                                               N/A                 MKRTPQQPRAWDDDWTPTPWGFGSAGGIDHFSPPRDVIAELHAVVAEVTGKPVEPAKRRIGFLP
7019925..7020557                   hypothetical; PP_06821                                                               N/A                 MTTKTPPAAWDRHALEVARGIASIDRSKLPGLTTQFVAILQSAIVESMMMAAETKTPEAAAVAAHGQTSA
7020554..7021045                   putative RusA family protein [Selenomonas ruminantium subsp. lactilytica TAM6421] gi|383754670|ref|YP_005433573.1|;  PP_06822     4e-06               MSPQPIVFTILGEPASKANSRQIVVRGGRPASIKSEKALEFERNALRQIPPRYRVRYTGPVAVTLHIFYA
7021048..7021371                   PHAGE_Vibrio_VP882: p26; PP_06823; phage(gi126010879)                                5e-26               VENQHKKIVGYRDLSQVEIDLMNRIKEKGAEMLELQQELVLLLAQQQHALKSAIGFDEKERLYGNSEPAV
7021376..7021621                   PHAGE_Burkho_KL1: hypothetical protein; PP_06824; phage(gi399528712)                 1e-07               MDRTQHPSNNAVLGAPAGWDQSGLPCGALPITRVLAGGVHHVMSFWRPTPDELKALAAGAPVELWVVGQT
7021693..7021950                   hypothetical; PP_06825                                                               N/A                 MLMTTEQDEFVFKTAVETAASLARNGEGEQEAVRAATAVVAAAIAAQRNIDALNVDAAPVAKVAGTGIVE
7021910..7022173                   hypothetical; PP_06826                                                               N/A                 MRLCPSEPFCAGLDMSSPITLQSAWAIAERADVTPQVAFYMGVHAALCAQLEAAALADQGALDVLNILTD
7022355..7022675                   PHAGE_Vibrio_pYD38_A: hypothetical protein; PP_06827; phage(gi514051009)             6e-22               MNEQAFYRSVASRAVEGKDTVLMKELLLRVVPVARPVSPEVQFDFPEDGSPVAQVDAIMKAVSLGKVPAD
7022672..7024156                   PHAGE_Salmon_E1: large terminase subunit; PP_06828; phage(gi170676278)               1e-104              MSRRRISYTAIARVEQLFKGITTKAAPAVFGICNMQREVIRRVDVDGHETDAEPTVFIPAKLERLIYPKR
complement(7024186..7024413)       hypothetical; PP_06830                                                               N/A                 MSAAACDTSVAMSGEVDAFSADDSSPLAAAASADDALAFGSLDAADSSVIWSGMSAASARLSRERRWERI
7024498..7024797                   hypothetical; PP_06829                                                               N/A                 LADTTATQTSETSAQSSAPTGDPAVPVNENTGKVEVAADAHAEAKDRFAGLMARLHKFENEAVDELKSDL
7024816..7026423                   PHAGE_Burkho_BcepNY3: NUDIX hydrolase; PP_06831; phage(gi149882917)                  4e-56               MLSKFRSVFGASLLPAAPAASRDAAPRAEPRWPTIEGPRRGVKINPGLIDQLLADQRGAGAAIDWAAKFR
7026398..7027210                   PHAGE_Burkho_BcepNY3: head protein; PP_06832; phage(gi149882916)                     3e-33               MPARARKPKGQARPARPSAALRIAYQRKLEAMIDEMHRSMLYWLRATYRDRESEIALDASPARDLADQLA
7027323..7028486                   PHAGE_Burkho_BcepNY3: prohead protease; PP_06833; phage(gi149882913)                 5e-36               MTVRRVDTDGRMFVKTSHISKAGVNPYYGREIPKWDELGLDPDKVYQVFRPPEELERAVDTFNTIPVLLV
7028494..7028970                   PHAGE_Burkho_BcepNY3: minor capsid protein; PP_06834; phage(gi149882912)             2e-05               MSFPNAVRLQPEVGVPGTRASMNPISVVSRVAQTAVNVARFVWPGTDTDNQVQNTGTGKPLGLAITDQVG
7028967..7029986                   PHAGE_Burkho_BcepNY3: major capsid protein; PP_06835; phage(gi149882911)             2e-66               MKLNQLRDFGIVLAHDAQMLTPEVRTKLLGEMIAMDAAGPLVTMPNNGIPQQLTNYFDPRVIEVLVAPMN
7029988..7030476                   PHAGE_Burkho_BcepNY3: BcepNY3gp08; PP_06836; phage(gi149882908)                      1e-08               MPETNDTQVKQPAEKKPAPSAPSAAPATSGETVTVYCKLPHGIRYNLPSGEELRFVGALGDERSQLQVSG
7030476..7030910                   PHAGE_Burkho_BcepNY3: BcepNY3gp07; PP_06837; phage(gi149882907)                      4e-16               MSTPSGVVTFDPEAFKAQFTAFATTSDATLQMYFTLATYYLNNSPCSVVQDLGMRAALLNLITAHIAFLL
7030889..7031473                   PHAGE_Pseudo_NH_4: hypothetical protein; PP_06838; phage(gi418488476)                5e-26               MCAVKVVGGGKIEAALARYLDGATKTMRAGVLEGSRYPNGLPTALVAFWNEYGARIQHPGGTKYITDAIV
7031526..7031855                   PHAGE_Burkho_BcepNY3: BcepNY3gp05; PP_06839; phage(gi149882905)                      4e-07               MRSTGYTTASDGSRTPTYSTTAASVQVQALSAPQLAHLDSLNIQGVLRNARLDGDWRGVYRPGNQGGDMI
7031858..7032403                   PHAGE_Burkho_BcepNY3: BcepNY3gp04; PP_06840; phage(gi149882904)                      3e-13               MPVTTSILETNVFDTLRAFLLAVVPAGTEVIKGQQNRLSEPESDDFIVMTPLFKMRLSTNVNTYTDPGTN
7032407..7033900                   PHAGE_Aeromo_vB_AsaM_56: hypothetical protein; PP_06841; phage(gi422937549)          1e-92               MSIPASLIANAIPSVISAGGTALDLIGFMLTNNPRVPIGSAPRFPTADAVIDYFGAGSPEANLASVYYNG
7033913..7034341                   PHAGE_Burkho_BcepNY3: BcepNY3gp02; PP_06842; phage(gi149882902)                      6e-13               MDITASNAIFMLSVTTIFPAAQRLQGYSADAAFATDAVEIAQTGKGVDGKMFAGYTPYNTPQNITIMPDS
7034344..7034784                   PHAGE_Aeromo_vB_AsaM_56: hypothetical protein; PP_06843; phage(gi422937551)          8e-21               MRKSTVFTATDGRDKGKAFLITELPAEEAEDWAMRALFTMVNAGVEIPDELLGAGLAGLAALGLKSLTKV
7034799..7034957                   hypothetical protein AXYL_04635 [Achromobacter xylosoxidans A8] gi|311107812|ref|YP_003980665.1|;  PP_06844     1e-06               MPRAIAVVCSERLATLVELQTVLGAEDLYNLLEIVAVDRHNARVLSEPKKGQ
7034961..7036859                   PHAGE_Aeromo_vB_AsaM_56: putative tail-fiber/lysozyme protein; PP_06845; phage(gi422937553)     2e-34               MATIVDALVVTFGLDTSQFKKEKAETTKATKQLTDAEKRSGKEIEEANKRAGESFKRVRNEVLSLLAIFT
7036859..7037560                   PHAGE_Burkho_BcepNY3: BcepNY3gp45; PP_06846; phage(gi149882946)                      4e-11               MPMPNLDIPQFPDVPNLPGVPALARSIASQAGAGVNRLAALVGLPPIVTLAQPVWGVFDDQNRRVAIADS
7037560..7037862                   PHAGE_Burkho_BcepNY3: BcepNY3gp51; PP_06847; phage(gi149882952)                      2e-11               MQIVPLSAIPSVRLSILLGGQNCQIKVYQKTTGVYLDLSVNDAPVVSGVICRDRVALVRDAYLGFTGDLS
7037859..7038722                   PHAGE_Burkho_BcepNY3: BcepNY3gp38; PP_06848; phage(gi149882939)                      5e-20               MTFSRKKIDLTITLGTGQFGDSGSNTVTLSGLRVHAGVQAFGGDAMPQAQLRVFGLPLDMVNQLTTIGPI
7038712..7039464                   PHAGE_Burkho_BcepNY3: baseplate assembly protein; PP_06849; phage(gi149882937)       3e-31               MPNDQLGYRGAADATSGGSPYSENLFLIHQVLAAVSTAKLVRVEAVTNAGDLSPVGFVDVLPLVNQLDGE
7039479..7039817                   PHAGE_Burkho_BcepNY3: BcepNY3gp52; PP_06850; phage(gi149882953)                      5e-12               LLDQTRWDLVLDAAGNIAVASDPYSIAQDVASAVRTFQGECWFDITVGVPYFQEVLGQDPPLQLLQSLIE
7039825..7041039                   PHAGE_Burkho_BcepNY3: BcepNY3gp32; PP_06851; phage(gi149882933)                      1e-54               MADPNSSVPPINWLPSGPVVPDESDIFDGVMADANAAFGGGMNTTNLSTPQGQLAQSTTAIIGAKNDDML
7041070..7041747                   PHAGE_Burkho_BcepNY3: BcepNY3gp31; PP_06852; phage(gi149882932)                      1e-25               VQNVDRTILSQYSNAATIVQLVHNMDGYIDPSADIDAFYDNMWNIDTAVGKGLDNWGKIVGLENGRLLKV
7041737..7043188                   PHAGE_Burkho_BcepNY3: tail fiber protein; PP_06853; phage(gi149882931)               3e-64               MQFSQLPTLLKLAFAALGGKNSIPVASQLPGNINGASYTDGFPPATRTAIVAGGKPPAGLDMNGVLFDLS
7043292..7043555                   hypothetical; PP_06854                                                               N/A                 MTSAQIASVEAVYAAHDPSKPSWSNFQSLAKAALADSDVTVMRCYENAVALPSNWAAYRKSLRALVSATS
complement(7043561..7044580)       PHAGE_Escher_TL_2011b: hypothetical protein; PP_06855; phage(gi418487678)            2e-11               MSDQNKLHSVHFLRFIAALAVVAHHVLIRYEYPVSVGAAGVDVFFIISGLVIGISIPREPSAASFAVKRL
complement(7044674..7045312)       hypothetical protein [Stenotrophomonas maltophilia JV3] gi|344205682|ref|YP_004790823.1|;  PP_06857     3e-17               VPAAAPDPTVAATANPPIVEMYGDSTTKGQETINGQPYFTQFNEPWQIYTRFTQDGIAAEVGNYGLSGTR
complement(7045405..7045689)       hypothetical protein Bphy_1865 [Burkholderia phymatum STM815] gi|186476620|ref|YP_001858090.1|;  PP_06856     2e-21               MPIEFDPPTTKDLADLKTQLKATGREMAEIFWLGGDHQWRKYTGGQQPREMSPQMAFLGAARMELTEDEF
7046219..7046551                   PHAGE_Burkho_AH2: holin; PP_06858; phage(gi399529081)                                3e-06               VDEMTEIVKEGKADVVDRKSGVPLAPGWRLHLADGWRRLHTRGTVIFSSTVGVLAPTGFALRETWNGMPD
7046548..7047048                   PHAGE_Burkho_AH2: lysozyme; PP_06859; phage(gi399529080)                             3e-46               MTLSDVISTAIAPALALLPAQMDTPQARVMLLSIGLQESRFTARQQDGGPAHSFWQFEEGTAASKGGVWG
7047304..7047564                   PHAGE_Burkho_AH2: Rz1; PP_06860; phage(gi399529079)                                  4e-16               MRKAQLTFYLLVGLLSSCSATGPAQVKTPAAVPEVQVKTRIIDTACDWTKPIFVSKTDVLSDETARQILA
7047711..7047728                   attR                                                                                 N/A                 GCAGATCATGGATCTGTT

#### region 3 ####
8083900..8083914                   attL                                                                                 N/A                 TTCGCCTTGGCGAAC
8089763..8090389                   PROPHAGE_Xantho_33913: phage-related integrase; PP_07833; phage(gi21232576)          3e-22               MPNAIEFIADRLPRVTVEDVRRFADTVEIRDATAFAAELQAFVHERVEAVKLSADLEVETVGQALARKAG
8090402..8091034                   hypothetical protein SMD_1507 [Stenotrophomonas maltophilia D457] gi|386717913|ref|YP_006184239.1|;  PP_07834     8e-112              MSRELPLFLIDAGELLQHVSRVVYRGSPLYYGRSSTNRYDDPARTYGVLYLGRDLPTALMESVFHKHQWL
8091118..8091495                   hypothetical protein AXYL_01114 [Achromobacter xylosoxidans A8] gi|311104320|ref|YP_003977173.1|;  PP_07835     2e-60               MNATTRISTAERLGRTFGRGWRAYVRCERRASSWLVSKGMPGVGATTLVWVVKLVALGVLLYTTFWLAVL
complement(8091511..8092989)       TraG-like family protein [Achromobacter xylosoxidans A8] gi|311104319|ref|YP_003977172.1|;  PP_07836     3e-140              MATNNEPLQLNLGSLRSAMSLTLHTHHASRIWHGRAAAEGRPGIVGLNGYIAVMNKMKRGSEQDDPYSDW
8093011..8093487                   hypothetical; PP_07837                                                               N/A                 MRSRQHRHAAEGSQSTNRNQRSPGLRRDGCTRCELSPGDSSTQRQGALHARKVMQTIRSEPNQARIGPTR
complement(8093616..8093750)       hypothetical protein Bxe_A1120 [Burkholderia xenovorans LB400] gi|91784672|ref|YP_559878.1|;  PP_07838     1e-20               MMQFFIEDLYLWFSRTYATQIRRYREPWYRGPTQPPHQSIDEPF
complement(8093833..8094690)       general secretion pathway protein, ATPase [Burkholderia xenovorans LB400] gi|91784671|ref|YP_559877.1|;  PP_07839     1e-161              MSQRLQALYGLKWNPFSPELPLEALYVPPRVENFCWRIENALVREGGFAMIHGEPGTGKSVVMRVLAEKL
complement(8094687..8095385)       transposase [Burkholderia xenovorans LB400] gi|91784670|ref|YP_559876.1|;  PP_07840     2e-132              MTDNGAAMLAEETTAGLLALGVLHQTTLPYSPYQNAKQETFWARIEGRVMAMLEGEPNLTLELLNQATHA
complement(8095436..8096125)       transposase [Burkholderia xenovorans LB400] gi|91784670|ref|YP_559876.1|;  PP_07841     1e-81               MTELHDLPLRDRWARLRFAVVGPLLAAPPDPGQVRELITALAAKRWRHPVTGDDVQFGRSTVERWFYRAR
complement(8096224..8096802)       hypothetical protein Bxe_A1123 [Burkholderia xenovorans LB400] gi|91784669|ref|YP_559875.1|;  PP_07842     1e-110              VCHVSARDPTFYHLLLRIDQDYAEQTRAQRCRCGGVLHSARYPRKPRGISYEARCHCEFRYSFCCADCRR
complement(8096943..8097089)       transcriptional regulator [Pseudomonas aeruginosa LESB58] gi|218891433|ref|YP_002440300.1|;  PP_07843     2e-18               MADMTSRDMAGKLLAAGFERSGPSATALSDPIADTPMVVTLDQLRPYD
complement(8097335..8097622)       chromosome partitioning ATPase in PFGI-1-like cluster, ParA-like [Stenotrophomonas maltophilia D457] gi|386717980|ref|YP_006184306.1|;  PP_07844     1e-42               MIQQALRDLFQDHAGIRVLATDVPAIEAYPRAATRGLPVHRVEYRQPPGRVAPAALDTMSALASELFPQW
8097734..8099266                   PROPHAGE_Escher_CFT073: transposase; PP_07845; phage(gi26248360)                     1e-13               MIPMTMIGKVRRMFHRQNKSVREIARLTSLSRNTISKYLNMDVQEEPKYQRRAQPTRLTPFHEVLVQALS
8099259..8100059                   PROPHAGE_Escher_CFT073: transposase/IS protein; PP_07846; phage(gi26248359)          5e-34               MRDLIVELKHLRLHGMAAGWAELLEQVNVEAASSQWLLERLLQAEVADRAVRSVSHQMNAAKFPVHRDIA
complement(8100236..8100850)       PHAGE_Mycoba_AnnaL29: hypothetical protein; PP_07847; phage(gi530787094)             8e-06               MQVVSIISTKGGVGKTTTAANLGGLAADAGLRVLLLDLDVQPTLSSYYELAHRAPGGIYELLAFNERNLD
complement(8100894..8101106)       PHAGE_Entero_P4: transcriptional regulator; PP_07848; phage(gi9627517)               8e-06               MSQTPVLPPNERRILRLDEVEAKSGFKRAHIYSLMKKRQFPQALRLGVRAVGWDSIEIDQWIAERLNHRT
complement(8101225..8101971)       hypothetical protein XF1787 [Xylella fastidiosa 9a5c] gi|15838387|ref|NP_299075.1|;  PP_07849     1e-107              MHQNAPTSKVFYRPIEAAIRWAGLLRYLPLILAAIASPRCLPSSLNCPRWNVCRLYAERIYDGILNGELP
complement(8102363..8102527)       hypothetical; PP_07850                                                               N/A                 VPDRGSKQRANGQTLRLAHMQESLPIHNCGMRPELASIEVAAGSRLGLQVLDAI
8102550..8102666                   hypothetical; PP_07851                                                               N/A                 MSGVQFPLLTEVALANLLVVKYQMVDFGILFGRVRTEF
complement(8103025..8104830)       PHAGE_Feldma_species_virus: putative hybrid sensor histdine kinase; PP_07852; phage(gi197322490)     5e-18               MKPPQFGPFPELAAYLEGKSGLITRRWLRAVRSDPAIEPAGRLTTGQLVDHLPSLYEEICTALRTQQMTL
8105038..8105961                   PROPHAGE_Brucel_1330: transposase, putative; PP_07853; phage(gi23502708)             5e-47               MSDLPGGMVRAVTPALAMQVMCHRNVLHRCRDASSAKLGRRRRTADGSGANRLRESVKVFSPTIRWSVMS
complement(8106082..8106591)       penicillin-binding 3 PBP-3 transmembrane protein [Ralstonia solanacearum GMI1000] gi|17547569|ref|NP_520971.1|;  PP_07854     4e-39               MHEPKPSRFRSLLQLAQMYTVFGNDGVFVPATIHARRGPLVSGKRVFSPRVAAQVLTMLESVVSDDGTAP
complement(8106692..8108962)       PHAGE_Bacill_SP10: SbcC type exonuclease; PP_07855; phage(gi418489611)               6e-08               MKRESITLDLESLPTGLIALTGPNGAGKSTLMDNLHPYRIMPSHASKLSVDGFSYWDHVCGTHALKEFEW
8111626..8111640                   attR                                                                                 N/A                 TTCGCCTTGGCGAAC
