gi|00000000|ref|NC_000000|  Pseudomonas putida str. Idaho conitg000100, whole genome shotgun [asmbl_id: NC_000000].22696, gc%: 59.19%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
complement(428..1330)              PHAGE_Burkho_phi1026b_NC_005284: gp58; KIC_RS0106010; phage(gi38707948)              1.39e-18            MIADLPPLNAVRAFASAARHQSFSRAAEELHVIHSAVSRHIRLLEEHLGVVLFERRNRQSLLPPIGKVYFEQISQGLAQIANATHALTRGSASRKVVINVRPSFAVRWLIPRLPDFMAQHPDIQPEVVTSTLAPDQSREAFDVVVRRGSSGWAANVEPHVLLEDDMLLVAAPALLQAIPVIAPSDVLRHTLLSGRTRSGDWVAWCKLAGVSQPQRQPSLQFDHMHLVLQAAVDGLSVALCPASLLGKDLATGRLHSPLPHLRLPLTRYYYGVSQDAVAETQVFIDWMFSQFSPGSDPLPL
1437..1730                         hypothetical protein; KIC_RS0106015                                                  N/A                 MNTTQAADRDSLRAAVILGLCLPGDVLLYLLLPVQPLDGATCIQALCGERGWRRYQGLQPYLYVVGAGLLFTGLLGQYLLWAARTLLNLLPGGMLHG
1723..2331                         LysE family translocator; KIC_RS0106020                                              N/A                 MASYGLFLILATLTVLSPGPGVVLTLSNALRHGWSGALPGILGIALGAFIVAGLSASSVGLILATSAMAFTVLKYVGALYLLYLGVKMWRTQRFIPELTVTATQPWRRFVEALSIQLLNPKAGFFFLAVFPQFIRAQDSYYSQFFILVSSYALLVVLVHTGYALVANGARGWLSTNRGARIVGKLSGVTFFCFGMLMASASK
2360..2638                         PROPHAGE_Pseudo_KT2440: transposase, putative; KIC_RS0106025; phage(gi26991145)      9.35e-06            MARKALEFLLSDDDRAHLRKTARSGRMPYRSVTRASILLLLDSGLTPKEVSLRLNVTAPVVFKWRSRYLANGIDGLEDLPRGGVGRGLSLVG
complement(2954..4093)             PHAGE_Salmon_SJ46_NC_031129: recombination endonuclease subunit; KIC_RS32435; phage(gi100058)     3.76e-42            MTPRKAKMAWVTPQYSKKKVMKAGSTLFDENATDDEFDEALIILNNWRSSHSYPVNTFQASLRNKLKSLGIKGLVAQRLKRIPSIVQKLERFPGMSLARMQDIGGLRAVVPTLRSIYKLRESYLNSKWDHVLVSEYDYIKAPKESGYRGIHLVYKYNNRKGGAKSYEGLQLEIQIRNEVQHAWATAVETAGVFLNQALKSSMGNARWLEFFTYASSSFALMEDCQVLDAHKNLSKFEILQRTIAIAKELDVVEKLTVYNSIVEELHHTQDEKTHYYLLELNTQNKNVTVSGYSREELPKATHDYLEREKAAKDNDSVQVVLVAAQSVSALKKAYPNYFLDTGKFVARIRRIGIIVDRGAYPLPPPPLPPRRPRTTTVAG
complement(4094..5296)             PHAGE_Cronob_phiES15_NC_018454: putative integrase; KIC_RS0106035; phage(gi401817566)     5.32e-69            MGRGGSGVRAVSDSSIEITFMFRGVRCRERVALKPTATNLKKAQQHKAAIEHAIAQGTFDYSVTFPGSPRAAKFAPETSQETVGGFLTRWLAAKQKHISSSTFAGYRKIVELRLVPALGHHLVIEFKRKTVRDWLDGLQVSNKTLSNIQSCLRSALNDAVDEELLDINPLAGWTYARKEAPPKDDDVDPFSPEEQQAILAALTGQARNMVQFALWTGLRTSELVALDWGDVDWVRGEVMISRAMTQAAAGEAEVTKTAAGRRSVKLLRPALEALTAQKAHTFLADKEVFQNPRTLDRWAGDQPIRKTMWHPAMKKAGVRYRRPYQTRHTYASMMLSAGEHPMWVAKQMGHSDWTMIARVYGRWMPNDEGQMGSKAVEMWEYRGNHRALPETGHGAIIEES
complement(5505..5747)             PHAGE_Strept_phiARI0131_1_NC_031901: hypothetical protein; KIC_RS0106040; phage(gi100045)     9.49e-05            MKNKLSDLRDHLFAQLEAVREADDDDLAKEVQRAQSVSDISRVLIESAKVEIDYFRHIGGENSASTFIESKPALPPSRRT
complement(5737..6294)             PHAGE_Bacill_phBC6A51_NC_004820: hypothetical protein; KIC_RS0106045; phage(gi31415769)     7.38e-11            MTKRGPVKRWTEAEDALLRLLYPNKTNKELCLLLPGRTKTAITLRAVQFGLVKTDAHRSETHRRILLARLEAKGGQIGQDPRPVGATHRKGRYTLIKVAQPDVWKPLHTYTWEQANGPVPEGMVVAAKDGDVQNTDLANLCLRTRAEHQLRNNHHYKGLPEEVIDILHLQNELKKEIKRKTRNEK
complement(6431..6826)             PHAGE_Pseudo_YMC11/07/P54_PAE_BP_NC_030909: prohead core protein protease; KIC_RS0106055; phage(gi100061)     2.17e-07            MLMLSRNIGKAVIIGGNIRVTVAQVNGCQVRLGIEAPRGVIIDREEIHQRRVAEGTAQKAPAFSIDEHVKLVADAHRYRYLRDRVCIEDPGSDVLVFQGDIAIGGGDLDRAIDTALGLGAIQQQVVQEQEP
complement(6917..7297)             PHAGE_Pseudo_phi2_NC_030931: hypothetical protein; KIC_RS0106060; phage(gi100010)     1.12e-23            MNALTFGNWTGSLGLGLAERELQCVMAVACGLTSKEAARELGVAKDTIDKRLLAASTKLGVIKRAQLVAEAMRRGLISPMVVTLCAVLVGHSVSSADEFTRTRRQGERKIETRVATRRAECALAVA
7453..7770                         PHAGE_Pseudo_F116_NC_006552: hypothetical protein; KIC_RS0106065; phage(gi56692946)     2.90e-24            MAKQKTQAAEQRKEMTGMERLVLRVSSMINHPIAQTQRWVTIHQLDTDSDQHWEEVMSMIAETPGIEMTFSDDGSVKLQWEAEEEQTSTLAMEGAEVEEEVAAPF
complement(7806..8636)             PHAGE_Pseudo_phi297_NC_016762: putative phage repressor; KIC_RS0106070; phage(gi374531272)     8.11e-75            MELKDRLKHARRLKGLTQTELAEKAGIAQASISEIERGLSRTSAHLVKIAQICGVSPLWLAEGVGSIPGSSEDGHAVVGEAVLKLSAADMVRQMLEKTGSGLSEEARNRLLQAAEETDSPPSDGSPKLGTTRGSTGDMIRIAHYDVRGAMGGGQVTHDYPEMLRDVRVSLSHLRELGLDFKEPHHLKLVTGWGQSMAPTIKDRDPLIVDVTVREFIGDGVYFISWGGHEYIKRLQVADDEHFEMISDNPKHKDRMIRKEETYIQAKVLYVWNGNLL
8728..9027                         PHAGE_Pseudo_F10_NC_007805: Cro repressor; KIC_RS0106075; phage(gi148912805)         6.87e-11            MNEIFIDLVKFFGGQVATAKALGVTQGTVSGWVRGIHGCSADMALIIQAKTHGRFAASSIRPSLAESLPTLNQKVPVKSHQAQTNESAVHPSSTSQASQ
9346..9678                         hypothetical protein; KIC_RS0106080                                                  N/A                 MHPKNTTASSPAQPIITTEIDFLSTPIDNRGLQLLTVAAGANAEDALRAARTLSSGLSQLCQHMHDSLNMGEMTYCDGMAALSFLGETVSALVWSVEKSVAFAAGRGGEQ
9675..9989                         hypothetical protein; KIC_RS0106085                                                  N/A                 MRPHAETLASPFATYGLHDVLEASADIPVHESLGAATDRLEAVVAGLRTLMQEPSVTHHATLVFYAAESALALVYAAHAGVDSQQEGAPQNSTTPVRGAGGAAC
9983..10279                        PHAGE_Pseudo_F10_NC_007805: hypothetical protein; KIC_RS0106090; phage(gi148912811)     1.42e-15            MLTVRTQLMSIPTVGDLVQDVTLSAEEVAKFNEAREAFRAIKSLYWSKVVPGLGGFENPVVCELERLMERVVFDTRNFLYPHRNAAAFHDAKDVGGAV
10276..11019                       PHAGE_Acinet_LZ35_NC_031117: hypothetical protein; KIC_RS0106095; phage(gi100014)     4.61e-27            MNLPSTVFTTMDTTELLALVNEARAAFGEGSVRHNDFVARCKDELDGEHYETFVVQNLNNTQSEGLRLTADQCKLVAMRESKGVRRRVLARLNELEGQQARPMTQAELIAASANQMVEIERKQAAHQVALERVERQVADLSQTMVWDHCPQNCLSLTGIKAAMLARHGLSGAVVDYVLKEWPHQPNSAGMVRNGHEDAKGSQYLVWTKSLVTAAFKRFVDECEMVNATQASHPYFNGRFRLTGKVHP
11016..11408                       hypothetical protein; KIC_RS0106100                                                  N/A                 MKRKLSKQELILQVSERAAEYYRAQSVARRIRIRLNDEYSMFFRACGEPDPKSRRIDPSNPLYGAVIAYTADTYELYQKAQRAKHNAKRAMESAIRSMIGPDVDHLPPLVPTPLPAGPVRRTTSTGETLQ
11405..11635                       PHAGE_Pseudo_F10_NC_007805: hypothetical protein; KIC_RS0106105; phage(gi148912815)     4.73e-23            MTSLTNPEQALQQRAGATIISGPWPTYSQFKGFPERERWTIYELAKVGREALEDSGFKMAESYDAFVRRVTEELDL
11632..12396                       PHAGE_Burkho_Bcep22_NC_005262: putative DNA replication protein; KIC_RS32440; phage(gi38640333)     2.89e-71            MSQERIPRKFQGVWIPASLWLDHSLSTNEKVMLVEISSLEDDVRGCYATNAHFAGFFGLSVSRVSEIISGLAERGLIKVEQIREGKRVIERRIRISNPFDKPKTPSENAVNPFGKGDEPPSENTQGSNTPMSNTKRVKALCASGTETAAAFEQFWKLYPKKKSRKDALKAWEKLNPDAELQSVLLASLAKHCVSRDWAKEGGQFIPNAATWLNGERWTDVLQPIGATPQGGAFNNLPHHTDDMYQESHDGRPNF
12377..13177                       PHAGE_Pseudo_F10_NC_007805: DNA replication protein DnaC; KIC_RS0106115; phage(gi148912818)     1.64e-54            MAAQISDLFHRTPAKRIFSGECPVHGRVDMSEVEQLDGSMLARGCKRCAWEALHTTPRDSAERALATAQRKAEDTMAALIGAGITPRFAAATFDSYRAEKDPQQKALAKCRAYAEQFPANYRAGRSLLLTGNVGCGKTHLASAIVRTVVADHCRALIVPAGDIVSIARASMVPGSGYTDRDVAVHLGGLDLLVIDEIGAQKGSEYELGLLHSIIDRRYQAVLPTVVISNLNAEGLKSYIGDRALDRLRQNGGQQVGFTWESKRAAA
13174..14556                       PHAGE_Pseudo_JBD44_NC_030929: hypothetical protein; KIC_RS0106120; phage(gi100003)     1.86e-86            MRALYSDEAEHGVLGAVIHASLQQDVGLVEDMLGQMTSADFYHADNAALFEAMLECREQAMPIDPVTLGAVQRLLPGGDNVMAYAAELASKVPSLANWKAYAKHVKEWSVIRRILDVAGGTQELVQAGAPTGEVIAAAQQAMADLRDLDGETKGFKRLDDWMGAAAQLVDDKFNGNAPAWPATGIEKLDELVQGIRPKKVTVIAGLPGSGKTTLALQIAQHNAVKERKPWLVFSIEMPGEELGMRAIASLGGVSLHRLDNPAKMQDDDWARMVGAVAQAQNAPLFVCDDPVQTPATIRATARQCQREHGLAGIVVDYLTLVRGDSAGRSRNEEVGKISKALLQMAKEMAIPVIELAQLNRESTKRPGKKPQSSDLRDSGEIEADASCILMVHRDMDTEEGQNGLTEILMTKCRHARVGSCIVQQEGQYGRFANFAGSLPSDDEVEAGRGSYAQRYKGANL
14553..14897                       PHAGE_Pseudo_PS_1_NC_029066: restriction alleviation protein Lar; KIC_RS0106125; phage(gi985757684)     7.39e-40            MIEPFKMAPCPFCEGPPCITAKDEAGTEIAEGHTFDPADEFPMVSAHVWCHDCGAQGPNIETLTLGTFEHLYDLQVVDVMRIAVESWNNRHAKARACYDAGDQKGLNLWPRREA
14894..16228                       PHAGE_Vibrio_X29_NC_024369: integrase; KIC_RS0106130; phage(gi658311188)             3.93e-78            MSAAKTLTVTLSDAEIRRHAAGEVFQLRDTRHRELRFRFSTVDRSRGAWHVVVRGRWGKAGDYPGINTKTMLATLPAILARRAADAEAKSTTTSWSSVGDVLAWYRDRMSRDRGLSAKRKASAKSALDRHLVPRLGNLLLAETNKQAIDQRLMWPLQERYALSFVRSVYGVLSVAFRQALRLDMLPANPMASLKFTDFVRTRIRPRPARLRGDDVPGLLMVVAERFEVEPAGCMLALMMLCHGSRLGETRLARWRNVNLEAGRWFIPAGDTKTKAEHNLPLTTQACALLRRYQRLQAAQGYTGLLLFPGSHGAPLSPSKANTLFTDLAKGEWSSHDLRKVARTAWTDLGVDYMVGELLLNHAMKDLDATYIHTTAEGLKRQALEAWHKHLDGQGFAAIHTETLPGQKTGTVAVDANSGAGCSASQHPSQGRMFNQESTPGAGHE
16221..16508                       PHAGE_Pseudo_F10_NC_007805: hypothetical protein; KIC_RS0106135; phage(gi148912822)     2.90e-14            MNNVTAALPRKSLTPVEREFLKQGNRMLLDQTNGRIAAAALMDIVADWHGSRAAQGFEQFAKAWIIQGGAKNKHAYKLLCELFGLDTDPTPRRAA
16505..16894                       PHAGE_Pseudo_PAJU2_NC_011373: putative antitermination protein Q; KIC_RS0106140; phage(gi209552491)     3.58e-14            MKKRTYMDKALGDTEYLLEQWGWWRMDGMGVPRYTSQIYALMRDNTPSQGGVKEYVITDDLALGVDCAVARLTKRDAQMGGFIWLYFGAKWPALRVARENGISEAKARELIKTGVAWIDCALEHFRDAQ
16976..17737                       hypothetical protein; KIC_RS0106145                                                  N/A                 MDEYRVIINKLKKTVDAARQEVELAIMFHESWRPAAYDSELHDRIGTSYAAHTFQIIRMSLRRELILCLVRLWDKDSRAVGMTAIAKHLKNPKFFKALVDYRARRLGLRSMFSPGPITETLTAKRDQALELINKYSPGGEAFDVFKKLQELRHKRLAHRQVSNEPAAVTRLEEDDQENESGDSYNWATEHEIEAFYQDNLVIVELLFSLINGVGYDLKSVTDVYRHHAKFFWESARGERTPGHPNYRAPVIND
complement(17862..18263)           PHAGE_Pseudo_phi3_NC_030940: hypothetical protein; KIC_RS0106150; phage(gi100035)     7.37e-30            MQYPICIEWGDENTAIGIQVPDIPGAVTAGDTFEEAYSAAVEVAHIMLEEIASNGQTIPMPTSAAAHRNNPDFADMGWGMLEIDITPYLGKTEKVNVTLPGFVIQKIDQYVRDHNVKSRSSFLADAAMEKLGR
complement(18301..18483)           PHAGE_Pseudo_phi3_NC_030940: hypothetical protein; KIC_RS34045; phage(gi100036)      4.04e-12            MQSRQLIKELEAAGWVLKRVTGSHHIFKHPNNPNSIPVPHPKKDLPIGTVKSIKERAGLK
18706..19029                       hypothetical protein; KIC_RS0106155                                                  N/A                 MNNEHQALADVPLWLLILLSMAGLSGEMLRASGADLSLRQILQRVALRFLASGLLGMATLLLALALWNNLYLAAGLGIVIAVIGADVAGGLYTQFLAKRAGLPPNDQ
19063..19251                       hypothetical protein; KIC_RS0106160                                                  N/A                 MLSHLEGEALQRVGILKGDAERLAKAIGRIEAVDQNALERAMIALRRALAKLEDAVTRNAAD
19255..19995                       PHAGE_Rhodob_RcRhea_NC_028954: minor tail protein; KIC_RS0106165; phage(gi971760207)     5.36e-07            MFKIGLDNAPGVSSALQRLYRDQLPFAAALTATELGKLVKAGEMRVMKQRLDRPTPTTLNSLFLRAATKARPEARVYFKDSWSSGIPADTYLQQAVAGGPRPHKRFEKSLIAKGLMQSGQFALPASYILNQYGNVSRGVMTRILSGLGAAESSSGYQSNATGSKRSKRKGNARRYFSGVVDSTDGVWERMDTAFGDAIRPVFLFSKSAPIYRIQFPFFRIAENIVTANHARVSTEALERAIATAKR
20232..20726                       PHAGE_Pseudo_MD8_NC_031091: hypothetical protein; KIC_RS0106170; phage(gi100001)     9.51e-55            MAESLGISVQAFDKWGVEPVQRIGRESFYDVRSVVDNRLQHQSGKQQLGSDDIDPLADAKLLQERLRLTREQADAQAMRNEVKRRNLVPVDFVTFALSRITSLIGSTLDTVHTKVKRKHPDIEPRHLEAVQHEVAVTRNETAKLNERLPEILNEFISAMDDDGG
20710..22696                       PHAGE_Pseudo_MD8_NC_031091: hypothetical protein; KIC_RS32445; phage(gi100002)       0.0                 MTTEADPPWLKPLVDAIEVGLSALYKEPPMTVVEWADKHFYLSSESSYQEGRWTTAPFQVAILNAMGNDLIREVNFVKSARLGYTKMLMAFIGYLIQHKKRNVLMYCPTEGDAEGVMKRHIEGMVRDVPVVLDLAPWYGMKHRDNTLEAKCFSNRKMLWCLGGKAARNYREKSPDTVIYDELSKFDEDIEGEGAPTFLGDKRLEGATFKKSIRGSTPTEAEKCQITRAAIESPHDLRFNIKAPCCGNELLLAWGGKDEPFGIKWRLNDRHEVEAAWYLCPHCQGGTFEYHEMVTAAEETGRWVCDRSGIWTRDSMEWFDADGAPTVTPRSVTFSVWTGYSTFTTWVDIATDFVKVGNDRGKLKTFVNTTLGEVWEENLAEKVDWEQLRDRREVYAAQVPARALVLTGGVDTQDDRYELRVWAFGKDEEKWLIYRRVLTGDPASVELLRQVGLELHRQFTRADGTKMGVLRWCWDSGGHHSETVRAQSRKHGLHWVIPIFGASTYGKPIANFPRKKDKKSKTYLTEIGTDNAKEVIYNRLKLQPDGNRPVPGLIHFPADDSICDDDELKQLTSETKKWVLVKGRRVLRWDASKKRNEALDCLVYALAALRISQERFGLDLDLLASQNPETGVWEVPAEPAPTAEPEEPPAPALPPSPAPVAPQ
