gi|00000000|ref|NZ_ALRS00000000.1|  Streptococcus agalactiae STIR-CD-27, whole genome shotgun 2030786, gc%: 35.32%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
326863..328218                     PHAGE_Strept_315.1_NC_004584: putative DNA polymerase III delta prime subunit; SAG0131_08715; phage(gi28876155)     0.0                 StreptococcusagalactiaeSTIRCD27MAEVSELRVQPQDLLAEQAVLGSIFISPEKLIMVREFISPDDFYKYSHKVIFRAMITLADRNDAIDAATVRNILDDQGDLQNIGGLGYIVELVNSVPTSANAEFYAKIVSEKAMLRDIISKLTDTVNMAYEGNDSDEIIATAEKALVDINEHSNRSGFRKISDVLKVNYENLELRSQQTSDVTGLPTGFRDLDRITTGLHPDQLIILAARPAVGKTAFVLNIAQNVGTKQNRPVAIFSLEMGAESLVDRMLAAEGMVDSHSLRTGQLTDQDWNNVTIAQGALADAPIYIDDTPGIKITEIRARSRKLSQEVDDGLGLIVIDYLQLISGTRPENRQQEVSEISRQLKILAKELKVPVIALSQLSRGVEQRQDKRPVLSDIRESGSIEQDADIVAFLYRDDYYRREGEEAEEIVEDNTVEVILEKNRAGARGTVKLMFQKEYNKFSSIAQFEE
328230..328517                     hypothetical protein; SAG0131_08720                                                  N/A                 StreptococcusagalactiaeSTIRCD27MSDAFADVAKMKKIKEDIKSHEGQMVELTLENGRKREKNKIGRLIEVYPSLFIVEYKDTAAVPGAIDNTYVESYTYSDILTEKTLIRYFDDESAE
328847..329458                     30S ribosomal protein S4; SAG0131_08725                                              N/A                 StreptococcusagalactiaeSTIRCD27MSRYTGPSWKQSRRLGLSLTGTGKELARRNYVPGQHGPNNRSKLSEYGLQLAEKQKLRFSYGLGEKQFRNLFVQATKAKEGTLGFNFMVLLERRLDNVVYRLGLATTRRQARQFVNHGHILVDGKRVDIPSYRVTPGQVISVREKSMKVPAILEAVEATLGRPAFVSFDAEKLEGSLTRLPERDEINPEINEALVVEFYNKML
329532..329544                     attL                                                                                 N/A                 TTGCTTACTTTTT
complement(329565..330737)         PHAGE_Lactoc_bIL310_NC_002669: integrase; SAG0131_08730; phage(gi13095863)           4.38e-81            StreptococcusagalactiaeSTIRCD27MIMKITEVKKKDGTVIYRASIYLGTDKVTGKKVTTKITGRTKKEVREKAKQEAVEFIKNGSTRFKATSVTSYQELATLWWDSYKHTVKYNTQLATEKLLTVHVIPIFGAYKLDKLTTPLIQSIINKLADKTNKGERKAYLHYDRIHALNKRILQYGVIMQAIPFNPAREVILPRNTKKANTKRVKHFENDELRTFFNYLNNLDKNKYRYFYEVTLYKFLLATGCRINEALALNWSDIDLDNAVVHITKTLNYKQEINSPKSKSSYRDIDIDSRTVTMLKQYRRRQIQEAWKLGRSETVVFSDFIHKYPNNRTLQTRLRTHFKRANVSNIGFHGFRHTHASLLLNTGIPYKELQYRLGHSTLSMTMDIYSHLSKENAKKAVSFFETAINSI
complement(331069..332034)         PHAGE_Staphy_StB20_like_NC_028821: hypothetical protein; SAG0131_08735; phage(gi971746525)     2.39e-107           StreptococcusagalactiaeSTIRCD27MENLSTRLVDKSIEAFIMGLEIYNKPTIKYRIEGFSFFICNAWELMLKAEMLNRNQSIYFKDNPDRTLSLEGVIKKIYSDNSTRIRLNLERIIELRNISTHYITEDYELKYAPLFQACVLNYVNELQRFHSRDVTKAISQNFLTITATYEPLSNEQIRLKYPAEIAEKFIQQANAIDVLVTEYNSDKFAIGIKQNLYITKKKSEADFIVSIANQSPSQVAILKDLKDPSETHKYSYANIISVVNDRLNKKNIKLNYKSGFNQYVLTLVIDFYSIKSDEKYSYCHKIGKSEHYTYSQKFVDFIISEIEKDPQHFVESLKKSK
332377..332478                     PHAGE_Strept_Abc2_NC_013645: hypothetical protein; SAG0131_08740; phage(gi281416409)     2.27e-09            StreptococcusagalactiaeSTIRCD27MKIAHELPNFPTLGNIGTEALYLIATLPDNQKQ
complement(332572..332859)         PHAGE_Strept_Abc2_NC_013645: hypothetical protein; SAG0131_08745; phage(gi281416409)     3.12e-15            StreptococcusagalactiaeSTIRCD27MLRRVNHVKNVLAHGEFAEWIENKIGIHYREANRMMTVAKQIPNVSTLKYLGATAKHVNGVAKRKQNFLSQISLIPTNPQLPHQTIINTYLYWQP
complement(332871..333485)         PHAGE_Strept_2972_NC_007019: DNA binding protein; SAG0131_08750; phage(gi66391801)     8.04e-21            StreptococcusagalactiaeSTIRCD27MNRLKELRKEKKLTQEELAGEIGVSKITILRWENGERQIKPDKAKELAKYFNVSVGYLLGYAPNKKIDFQLNLDGTTLHLTKEQFLALENTSKSIKKIKNTINESVKQEEYIKNASKYYDFEKVSRRLTDRLFEIHTDLIELLMMLDHFPSGELSKSQQEAIFKFYKQLDYFVTDTPASFDYFKKNLESYGYKIYTEGDKIDFD
333691..333891                     PHAGE_Lactoc_bIL311_NC_002670: ps3 protein 14-like transcriptional regulator; SAG0131_08755; phage(gi19343481)     8.62e-16            StreptococcusagalactiaeSTIRCD27MDKLRGYRVMLGLTQKDMSDKLNISLQSYNNKETGKSAFNDKERLAIKSMVSEIKPDITIDELFYS
333915..334517                     PHAGE_Bacter_Rani_NC_029084: antirepressor; SAG0131_08760; phage(gi985759370)        1.03e-19            StreptococcusagalactiaeSTIRCD27MRTETWNGYTIRFVEHQGEWWAVLADICHALDLKPKRVKERLVDEVVSTDHVADSLGRQQEMLIVNEFGIYDTIFSSRKPEAKSFKFWVFETIKQLRQATGLEGFEVFRMLDKEHQKEAMARLTNSLDRVSKKDLIKANTITNKAVSNKFGYSKMVKKSEMTQDMLVAREMILDDTVELMGIKEKFGLNISVSESIYNKN
334753..335391                     PHAGE_Lactoc_bIL310_NC_002669: anti-repressor; SAG0131_08765; phage(gi13095876)      2.39e-06            StreptococcusagalactiaeSTIRCD27MNIIKQVKSSFGELEIDFYLDRNRNIFVTIEQLAQGFGYKSRNAIEKMIERQPYLKEKRFSVTDKLSATDGKQYETRLFNKRGIFEIGMLSKTEKGKIFRQWIYDHIEELERENANFKLIRELEKSNHKELTQAIKDWEHFNQWSYKAISDLLLKSVTGQTAKQLKQSRVGYEIALDCLSADELTRYRKLEQKVIVLLELNAEYNDIKKLVL
335493..335666                     hypothetical protein; SAG0131_08770                                                  N/A                 StreptococcusagalactiaeSTIRCD27MSPKMGRPVKGTAKRDKRLEVRLTADEYNTIQETADKNGLSKADLIVKAVNSYESEK
335807..336259                     hypothetical protein; SAG0131_08775                                                  N/A                 StreptococcusagalactiaeSTIRCD27MLKNQDNMIKKKRNPRVLFRNVAYKLSEIEGKTLTEIASFLGFGNSEVCRSALYKWKRKKWLKFDLKNGHYRNVEVLHEVTLEKMANKELKEQGLIYKANIYYEQVVSTSEIIEDIKTKTQDRIKAIHLQQKALERIPSELFAELYTNMN
336348..336680                     hypothetical protein; SAG0131_08780                                                  N/A                 StreptococcusagalactiaeSTIRCD27MKYRVETNPFSKDRYTPEQLEMFKNRQLSKNKAEAYFTRLYNQHIAWVIIANVMTEYVIKFRKSATSFEEAWDALDYQRTTEIVFRAVNGLPCSEKDTGELETYLSEVSA
336677..336871                     hypothetical protein; SAG0131_08785                                                  N/A                 StreptococcusagalactiaeSTIRCD27MIQELNLTPTQTLILFIVLGLIGLLLSRSKPLIEIDLPEDIQSPKPRQNANYGAYIQSQNHYYN
336883..337212                     PHAGE_Strept_M102AD_NC_028984: hypothetical protein; SAG0131_08790; phage(gi971763197)     1.18e-07            StreptococcusagalactiaeSTIRCD27MTLPENYRRVLKLIKVGADNPITGAEIGLILKLEERSVQSIISSLITRYNVPIIGIRHGFNRGYFIPANKEELLDGAKAFYNQVQKEQERLSVLLNADLTSYKKLLKGG
337215..337487                     PHAGE_Lactoc_bIL310_NC_002669: hypothetical protein; SAG0131_08795; phage(gi13095880)     3.13e-08            StreptococcusagalactiaeSTIRCD27MNVFSQDYEAKLLEQNLTAFNRFLEAYQKPKPRVLGLITAEQVKEELNIKGKTLKRWEKAGLRRYQPPLEDTRKHYYKVSDILIFLGVNV
337488..338357                     PHAGE_Strept_315.2_NC_004585: hypothetical protein; SAG0131_08800; phage(gi28876243)     5.88e-15            StreptococcusagalactiaeSTIRCD27MAIYEARGFSSYLYPYKGPLEPFDYIAQFKPLKPPEDIDIEEYKRTQAPYCLSGKVTAEKNGSYKRNNASLVYRDLIFLDYDEIEGPAQGFIEAVSRALFGFSYILYSTIKHTPESPRFRLVVKPGDVMNEETYKQVVKEIADKIGLPFDMASLTWSQLQGLPVTTGDPADYQKIVEHGLDYPVPKSNKNRTSGQGVKPQTYTPRPSGQRSITMRVIDTLFNGFGDEGGRNVALTKFVGLLFNKWVDCDIETAYELTKIANSVTANPLPERELDRTFESIARAEFRKRG
338377..339879                     PHAGE_Lactoc_bIL310_NC_002669: helicase; SAG0131_08805; phage(gi13095886)            4.46e-71            StreptococcusagalactiaeSTIRCD27MKSLESEILEARENEQPPKTMRELENRIFQAGEQWREEHTETKINESTGDVTEKVAMPQVFTVAKMLSEIITFTFISKSNVPDYSLLYIYDLDEGIYTASNDLFNRFCKTFDVRIKPREWPQIKLMVRTLTRIKKPLESAYFIPVQNGIIDLRTKELLPFSPKYVITSKISTAYHAPKRVPTDREGKTFDDWLNSIACNDSELVTLFWQIILEAINPNHTRNKFAIFYGDGNNGKGTFQRFLINLIGESNVSALKPAQFAEKHNLETLVGKVCNIGDEAPNEYLKNPSDLMSISSGDTVLVNPKGRPAFEATFKLFNIFSGNYIPNGGNKTKGWYRRIMIVPFNADFNGEKEKPWIKNDFLGKKKVLEYALYKAINQESFTHFIEPQAVKGLLEEYQEDNDYLLSWVKNEYMEKGWHELEVVPVFIVTRSLKHYAEDMGIAKPNVYGAGKETIRHLQQLTPNKYQLKRARVKLEDYDKLDPLEFERKKLGNVNHSITKKE
340244..340789                     hypothetical protein; SAG0131_08810                                                  N/A                 StreptococcusagalactiaeSTIRCD27MTLKTFSDTAQTFTFTYDFEDIDTAKVASHAVLGYMTGTYHAPVIEVTIKGKGQLVLEYVEDKKLSKVFKRICGSFKDYYNQPEDMTDEELDDMAQENELIKEVEELEHQRVVPLFEITQEEANKQDTLMAFISDHDQLAEHLSMNYQEMNQDDLGAILETISQAFNHLYDMVVEGQLVVK
340863..341351                     hypothetical protein; SAG0131_08815                                                  N/A                 StreptococcusagalactiaeSTIRCD27MLELAIESIIKPMKAQRKTRVTGTINDQSVTIDLNNLVIHYNHQNLLLETIPGTYGGKRYFFLCPKCERRCRKLFKIYNIFACGSCQKVHQATLNRSKTDCQYYWRLAFRECLKVDPKARYKHGYYSHDDFPKRPKYMRIAKYLYHWKRFHYYMDKGDRHWL
341755..342117                     hypothetical protein; SAG0131_08820                                                  N/A                 StreptococcusagalactiaeSTIRCD27MSAKEQLKELKPLFALITLFEEQRDKDIKLMNAFRNPELLNGIEKGTAQQLLYLAKERDKRLAMIATLQDERQIAVIKARYVDDLSWDEIPDKLGYSRNTVFKLHREALEVLDEQEERYS
342092..342478                     PHAGE_Strept_315.5_NC_004588: hypothetical protein; SAG0131_08825; phage(gi28876412)     1.74e-18            StreptococcusagalactiaeSTIRCD27MSKKNAIRKLKEFHRWQRIANSLNLTYNERYQFDIDYHPTRRKHLEISRECALEELDAIKHAINQLSKIEYRKILIECYLIGEKNLKKPQQDIIAELNRSQSWYYEIKKRALLEFVELYRDGILNKIN
343189..343201                     attR                                                                                 N/A                 TTGCTTACTTTTT

#### region 2 ####
1023832..1023846                   attL                                                                                 N/A                 ACAGGAAACTTTTTT
complement(1027996..1028868)       PHAGE_Cronob_phiES15_NC_018454: putative protein kinase; SAG0131_04800; phage(gi401817584)     3.06e-08            StreptococcusagalactiaeSTIRCD27MVNPEFYEKIAKIFCGDDLELFKYKSGPDLVHFFNNNFKISDSYGQGFPTRWRYVNQKLLDFSSVGKIDEYFNIILSKQYLLTERQISEIDALVHQQRILDELNKVCSVYSLKLSQKDGAFHLVEIDLDLIEIGSGGFANIYFQKSTGLVLKKLNEESARSASIRSRFKREYEITKSCSDIGSIIKVYDFDIGNCSYTMEKADNILDDFVKESFLTEDSQINIIRQILYSMSLVHQRGVLHRDLSPTNIFFINGIIKLADFGLGKNLNTLTSHQTMDTASFGQLFYCAPE
complement(1028882..1029655)       hypothetical protein; SAG0131_04805                                                  N/A                 StreptococcusagalactiaeSTIRCD27MGENLNSNIDPRIIFKQLPPATIIKGFVAGETKCNYEIYLLELLNKSVYFREKGKSKFHAPEDESHGECDAVADDYKIDFKLLSSSSRLQASSLFSPSITNLGNGITAIGESRNPNGEIKATQIHVAFRFRTVSDLIRLKVKRQHVRKQCLEKDIIKVLNMLEKQKNLLLFFPYIFYTEEEISTNELDDIILNAISYDFSSLFAYRHIKVQSFETYLLTIVRDEFNIFKISNKRLKLIEKLSCSELPTFVKLKSYSI
complement(1029725..1030918)       PHAGE_Bacill_Gamma_NC_007458: site-specific recombinase; SAG0131_04810; phage(gi77020163)     4.97e-27            StreptococcusagalactiaeSTIRCD27MDIYADEGISATNTKKREAFNRLIQDCRAGKVDRILVKSISRFARNTLDCIKYVRELKELGIGVTFEKENIDSLDSKGEVLLTILSSLAQDESRSISENATWGIRKKFERGEVRVNTTKFMGYDKDENGKLVINPEQAEVVKHIYHQFLKGYSPESIAKELNTNGIKGWSGKANWYPSSILKMLQNEKYKGDALLQKTYTVDFLTKKRTENDGQVNQYYVTNNHEAIIDTEMWDTVQEELARRKDFREKHKLKTYIMQSDDNPFTTKVFCAECGSAFGRKNWTTSRGKRKVWQCNNRYKVKGQIGCQNNHIDEEMLEKAFMKAVELLQEHRADVVVKWQKLEKGTNLLHKHYAKQMYQLLDLEKFDGTIMNKVLDHISISEVGQIIVIFLEGTEVEL
complement(1030974..1032215)       PHAGE_Clostr_phiCTC2B_NC_030951: hypothetical protein; SAG0131_04815; phage(gi100001)     1.48e-28            StreptococcusagalactiaeSTIRCD27MAVRLIKTKSNRKKQRVCAYTRVSTTNSSQLDSLENQKAYFETFYVNREDVDFLGVYYDKGISGSKEKRPSFQAMLEACRQGQIDLIHTKSISRFARNTMTVLEVSRELKALGVGIYFEEQNINTLSNEGEGMLSVLASLAEEELQSMSDNQRWAFQRKFQRGEMVINTKRFMGYDVDDKGELVINEAEAQIVRRIFQLYLDGMGMHRIAKLLNQENVPTVTDAKWHDTTVRNILKNEKYKGTVLLQKYFHVGINGPKRLNQGQVEQYLIEDNHEPIVSKEVWQAVQDKLASKTWKQGVNKHYRFTSMLKCEYCGSTLKRQVTYKKQIVWCCSKYIKEGKASCRGMRVPEKAIEEWKLRTPVTVIERNEYGQKHYSYSSQESAADGHPSASNQNKSGSLLSGVHRPRRTAIKL
complement(1032753..1032860)       hypothetical protein; SAG0131_04820                                                  N/A                 StreptococcusagalactiaeSTIRCD27MTAFEVVQIIIGFGSFTVALIGLCYKIFKDDDKKK
complement(1032996..1034402)       PHAGE_Strept_315.4_NC_004587: putative cell wall hydrolase, lysin; SAG0131_04825; phage(gi28876322)     6.86e-38            StreptococcusagalactiaeSTIRCD27MTFLSKIKDGCLASWEHGILPSVSAAQAILESGWGESLLAQYPNHNLFGIKASSDWKGKRVDLPTQEYIDGKFVTVEATFRKYDSWEESIKDHALFFSETAWRRSHYQNVLGEEDYKKTCLALQASGYATDPNYGSKLITLIEAHHLNTWDDRILNKKGETTMSKHLVICGHGQGQTGYDPGATNPSLGITEAGKVREFANLMKKYSGNRIDYITDHNVYDYRSIGSLGNGYESITELHFNAFNGQARGSEILIYSGYTADSLDQKLLAILAKRFTNRGFKQVNWLYNANVSASRGYNYRLVEIAFIDNNSDVGIYEANKDSMAREFVQAITGQAQVISPSPNTPQSRVTSYHVGDPVTVQQHATHYQTGQAISSWVKGKTFKVIRVKDVNQSNSKKAYLLEGINSWVLEQDVKGTTNGHSEQTYTVQKGDTLYGIARKFKTSVSELVRLNSIINPSLISVGQKLKLK
complement(1034404..1034802)       PHAGE_Clostr_vB_CpeS_CP51_NC_021325: putative holin; SAG0131_04830; phage(gi509140062)     2.37e-26            StreptococcusagalactiaeSTIRCD27MKELLATNKVLFSAIGGLIGSIFGEVDGFLFALMVFISIDYITGLMAAAVEKKLASNIGFKGIFKKIVLLFLVAVGQIIDEHVLKQGGMVRTAIIFYYLSNEGLSIIENAARIGLPVPEKLKDVLKQLKQGD
complement(1034820..1036676)       PHAGE_Strept_T12_NC_028700: putative structural protein; SAG0131_04835; phage(gi966201536)     3.53e-153           StreptococcusagalactiaeSTIRCD27MADYGSNNDRGYTLLLRVEETGTSTADNTSTVRVQLWLKNGYTTFGMYDCRASVSINGQTLSWSGRPDMYTAHSSLHLIDKTITVPHDSNGSKTISFSATFSGSGGWSPGTLNTGSQTLRLSDIPRSSSATVSGNLMGQDVTITIKRASSDFTHNMTWHFGSLSGTIGTGIATSATWTPSISQLATQIPNSTSGNGHLTLATIYGGKTIGSMTIPITLNLPTSVVPTLGSISVSESHATAKTILTGTSFAQLVSNPKVTFNQGAGIYGSTIPSTGFRAEVFKFENNQWVQLQNVTSSNNGLLGGINWIGRAKVSAYVTDSRGRQSARKEVEITLLEYFKPIFSFSAVRAGSSMNQVTVTRKLKIAPLTINSVQKNKAALTWEVVDLASGQKVTNAGGAANWTSTTEHTKTDFQAILGGTYDTTKSYTIIGRLEDLFYATIFEFTIGPEKVVYGLSPSGMGIGKAWTRGVLDVDGSLPAYFDGDIYMKNKKLLDIFYPVGVIYESTSSSNPSTFMGGTWERFGNGRVLVGVSENESEFNSVNQSGGSKTHTLTIDEMPSHSHAQYVTANNGSGAVRRDYSSDGSSTIYPQGNNTGNTGGGKPHNNLQPYVTVYRWRRAA
complement(1036689..1039604)       PHAGE_Strept_phiARI0131_2_NC_031941: hypothetical protein; SAG0131_04840; phage(gi100005)     6.27e-109           StreptococcusagalactiaeSTIRCD27MLYLLDGQTKTPKWNGQPLFETVSASVEEVLNGTFQLRLTYPITDSGVHETLRADELILCPTPDLGKQLFRIKQVKIQDDTVELECYHISDDVMKRQVKPFSAINTTCQSALMRMVEACPSDLGLFSFDSDVTERHTYVSDEDLTLYQALMDGKHSLLGMWEGEFVRDNFQLMVKKHRGNDKGVILTSHHNLKAFEDKGDSDKVITRIYATSTFQAEGSDEDTVLSVVVESPLINQYPYIHEARYENNTLQTEEELRQWAMAKFTHEHIDNISRQITVEAYQLDGQEVHLGDTVTLKSQKHKVDVKKKAVGYTFDALEEVYLSVTFDDEVTFTNSGSSGVNSLTSAAKTILDVNQSVTEHRASKERANFNKVFDRQFERLQTEVEDGIAIAKAEGERSGKKAALDYLATNGLEARVAAFQKATIDELTVSSSAWMTRLVSQQILSEYVKSLEVEADKVVIPGQHTPVFSLDRDGNLSIDTPLLKVRGESLATQADLKTISLTPGPKGDAGADGVGIQSREQYYLVSAQKTGLTATSASWTKTIPTLTSTLKYLWNYEKTTFTNGSTTVTTPVIIGVYGDKGVDGKAGKDGKTLYTWRMYADNDKGDGISAVSTGKRYLGLAVNKESATPSTNPSDYTWSSFFEGTELGGRNYIDDYAMKAATFSSITSEWKKEVVEDTSSVSGVTVKMTCTKAGTGGFHRNFYDLRSRIGANMTFSIDLKASKTVSLTIGNELGGTKVVQVSSSWQRYSVSWKVTSAQNHSYVFYLKSGTWAVGDVVYLRNVQLEDGNVASAPGPSLNDLIAQIDAKADNGFMKQQLDLLTEKTESLRVDLEARALAKEVADWLKSYKEFEKNNEAVLAQFNQDFIDNTARIAAIEADLKANSLLLNFVNTYLRAGDNGVIIGKKDNSEYIELTPQGMMIKSAGNAVMTVTVGVIKIHHGVFVETLQVGYYRLEAARHNAKHLVCRFIDAK
complement(1039604..1040329)       PHAGE_Strept_phiARI0131_2_NC_031941: hypothetical protein; SAG0131_04845; phage(gi100006)     1.20e-100           StreptococcusagalactiaeSTIRCD27MIKHNELVLNRKGTSSFPFKVLVEDRPSIQVPRSKTQLLDHRGLSGAIVQTNKHREVIEKSYRLYLIGASEKEVNEFSAFLMQEGFWLESERLKLTRLWCYRTDSFDIKQDDHDVFVIDVTFICHPTRFFKNVDRQVLTTNGVLKTQGSALAFPTITITGQSVSETSFTVGDQVIRIEKFTEPLVMVNHPERPSFKTLSGKAVKWSGDFITIDASHPTQSVGVILGSGILSLTFETNWGWV
complement(1040326..1043445)       PHAGE_Strept_phiARI0131_2_NC_031941: hypothetical protein; SAG0131_04850; phage(gi100007)     0.0                 StreptococcusagalactiaeSTIRCD27MAGNIKGITIEIGGDTQPLQTALKGVNKQASEATKELRQIDKALKFDTGNVTLLTQKQEVLAKQVETTKEKLATLRQAQAQVEAQFKAGNIGADQYRAFQREVESTQTVLKGYESKLESVNRALSENGAQVETNQSKLNRLQNEQAQLVSESEKLQSSFKLQESALATTASEADKLALAQQKVASHSEILEKQIHNLEQQLSLTKSEYGENSVEANKLEKTLNETKTAYNNLQNEMEELASSSASSKASLEETNSLLKADLLMEFGDQLGELSQKLIDFGQQSLDAFLEVDEGMDIIVTKTGATGSALEEMTDIAKTLATELPTDFNTAGSAVGELNTQFGLTGDALKSAATQLIQFSEINGSDVTSSAISAKQAIEAYGLEATDLSSVLDTVTYTSQSTGVGVQELMDKAVAGSPQIKALGLSFDEGITLMGQFEKAGVDSSAALSSLSKASVKYAGDGLTLQEGLAGTIEQIKTSTSETEALSLASEIFGSKAAPRMVDAIKRGALSFEDLAGTADKAAGIVTQTYEGTLDPVDKFTTAQNTAKLAMAEMGDAIAATLAPILEVIASLLQAVATWFSGLSEPVKQFIVIVGSLVAALGLVLPIFIALQAAAMAMGTTIMGMITAAAPIVGIILGVIAVVALLVVGIQQLWQHHEGFRTAVTEIWNAIYAFLTVIIQQISSFVMSIWGTLITWWTENQQLILNATNTVWTAISTVIQTIMTILAPYLQASWENIKLIITTAWDIIKVVVETAINVVLGIIKAVMQIITGDWSGAWETIKQVVSTVWEVIKSLISIVLSAIAQFISNSWNGIKGTMTNLLNSIKGVVSNVWNGIKSTISSILSSIGSTVSSIWNGMKATISGVLSGISSTVSFVWNGVKSTITNAINGAKNAVSSAINAIKNLFNFKIKWPHIPLPHFSVSGSANPLDWLKGGLPKISIQWYAKGGILTKPTAFGMTGNSLMVGGEAGREAVLPLNNQTLGSIGSSIAATMPNKGTTITVNITDVVIREEADMKKLADYVAGRLAAEMARQALLRGGRV
complement(1043740..1044159)       PHAGE_Strept_phiARI0131_2_NC_031941: hypothetical protein; SAG0131_04855; phage(gi100008)     4.88e-60            StreptococcusagalactiaeSTIRCD27MRQNITISGKTYPLATNAYTPIAYKEQFGKDYFHDLFNMLSAESIMAQLEQLEEGEELKASQIDLSILSDFDMTFFHRLFWVFAKSANPRIKPFEDFFMSMEEFPLQEVGPVLMSMLNQGMTTRKKQKLPKQRARKSSR
complement(1044171..1044740)       PHAGE_Strept_phiARI0131_2_NC_031941: hypothetical protein; SAG0131_04860; phage(gi100009)     5.38e-68            StreptococcusagalactiaeSTIRCD27MAEKNKVTFGLQDVHWAEVTNEGADGALTYGKVERLRGAAELTLEPTGDKGSYKADNINFYTTESNDGYEGTLKVALLYQEFLTRVLGEQLDATTNTISEIANSEKKNFALMFRFEGDKKETLHVLYYCYASRPTVGSKTKSGSDINEVELTFTASPRPLDKVVRRRTTEETSDEIRENWFKSVFEPAA
complement(1044743..1045069)       PHAGE_Strept_phiARI0131_2_NC_031941: hypothetical protein; SAG0131_04865; phage(gi100010)     1.03e-10            StreptococcusagalactiaeSTIRCD27MRFEELFPVLKKTKLPVAYHHFEEGHSPSPPFMVYLVTDSDNLGADNWAYHKAINVQIELYTTKKDLATEKTVESVLDAHRLYFDKVETYITNEKLYQTIYSITLLGG
complement(1045078..1045446)       PHAGE_Strept_phiARI0131_2_NC_031941: hypothetical protein; SAG0131_04870; phage(gi100011)     7.50e-24            StreptococcusagalactiaeSTIRCD27MTKIGLDDLASVIEKDLTTYAKDTTDTMREVVEEVTDDAVDTLKVTSPKRRGKYAKGWTSKATTDTNTALTKAIHNRTPGLTHLLEDGHAKQNGGRVEGRKHISPVEKKAIQSFEDKLRQKL
complement(1045439..1045777)       head-tail adaptor protein; SAG0131_04875                                             N/A                 StreptococcusagalactiaeSTIRCD27MKIAPLREQLVFQEKRLKQDDIGNESAIWDDLFMRWCSCRPLALTESDGSATKLIHNKVQFTLRYDKAVLALNSLTTRIYFRDQYYAIESIDGDTVARSLIYIVATKEELYD
complement(1045777..1046034)       DNA packaging protein, QLRG family; SAG0131_04880                                    N/A                 StreptococcusagalactiaeSTIRCD27MMTLEEVKLYLKVENGEEDYLIEQLMATSRQICEDILRESSTSEVLKTAILYGVAYLYEHREEANHKELKETLYHLLLADRKDVF
complement(1046031..1047239)       PHAGE_Burkho_KS9_NC_013055: major capsid protein gp5; SAG0131_04885; phage(gi255033737)     3.19e-40            StreptococcusagalactiaeSTIRCD27MSKLLELKEKRNAAWAQAKAFLDTVRSEDGLVSDEDSKRYEEMEAKIELYNKEIARLERQEKIDLELAQPTSQALTTQPTVIVDNQKEDEKKGVASDIYTQTFWTSVRKRNFYDVKDVLRVGEDTEGGHLVPDEYEKKLVQELQEENFFRSLATVIKTSSGERKIPVVTGHGSASWMDENGLYPETDETFGQVTLDSHKIGTAIRISEELLNDSVFDLESYMTSEFARRIGTEEEKSFLVGDGSKKPTGIFTQADVEGPTTATKDVTFDDMIELYHSLPAPYRKNAVWILHDTTVKAIRKLKDNNGNYIWQPSTQAGQPDLILNRPYYTSTFAPLPEAGNKAIAFGDFSYYWIADRQGRTFKRLNELYANNGQIGFLASQRVDGKLVLPEAVKTLTIKGKTA
complement(1047253..1047951)       PHAGE_Geobac_E2_NC_009552: putative Clp peptidase; SAG0131_04890; phage(gi148747731)     2.51e-53            StreptococcusagalactiaeSTIRCD27MRKFWNFTDEGEVRTLRIEGQIADETWFGDEVTPQLFKNDLTSETGDITLWINSPGGDVFAAAQIYNMLMDYQGDVHVIIDGLAASAASVIAMAGTTVSMSPVAMMMIHNPWTFAQGEAKDMAKVIEMLGEIKESIINAYELRTGLSRTKISHLMDSESWFNAKKAVELGFADKVLFEKEETPEQDYQNSYTFSRVTAAHDLVVKLQASLQPPKPQKTIPFNQLEKRLNLLK
complement(1047944..1049233)       PHAGE_Burkho_phi6442_NC_009235: gp4, phage portal protein, HK97 family; SAG0131_04895; phage(gi134288632)     1.27e-85            StreptococcusagalactiaeSTIRCD27MGLLDLLGRKRARDKPQNSYEGQDFYYLFGRTTSGENVDEFKAMQTTAVYACVRILAEAVASLPIHVYEMTSSGKKKKIDHPLYFLLHDEPNPEMSSFIFRETIMSHLLIWGNAYVQIIRDKAGRVISLYPLLPDKMSVHRDDSGKLYYKYQRQTEENPNFKDKGTVLLKQEDILHVPGLGFDGLIGYSPIAMAKNVIGMTLATENYGAAFFKNGANPGGVLEHPGILKDPKRVRDSWNAVYNGVTNAHKVAVLEEGMKYTQVGIPPEEAQFLQTRKFQINEIARLYRIPPHMVGDLEKSSFSNIEQQSLEFVKYTLDPWVVRLEQAFKRSLFLPEEKKRYLIKFNVDGLLRGDYQSRMNGYAIARQNGWLSTNDIRELEDLNLLSDEEGGNLYLINGNMTKLKDAGGFMKQPTETEPAEDPPEEEEDA
complement(1049314..1049586)       hypothetical protein; SAG0131_04900                                                  N/A                 StreptococcusagalactiaeSTIRCD27MELVKTIQIGDDIYLPIPDQFGIQEGQEFNLYQSSDGTLVLSPLDSKLSADYQSLSSDEQETTVVEQATLDKVANSVLSRHLDAFKELAE
complement(1049603..1049908)       plasmid stabilization protein; SAG0131_04905                                         N/A                 StreptococcusagalactiaeSTIRCD27MKEYQVTISDDAKADLLSIYHYVRDELCAPQAADNLLEKISQAMLSLSIFPERCSIIEDLVGKGYTFRQLIVKKYRIIYHVLEDEVIIVAVVYGSRHMDNW
complement(1049908..1050210)       plasmid stabilization protein; SAG0131_04910                                         N/A                 StreptococcusagalactiaeSTIRCD27MAKTGTLNLRVDDSVKSAADEILKRLGIPMSTAIDMFLNQIILTGGIPFDVSLAEAPQRVNVDYMSQEEFYDKLITSFEDAKGGKRQDVREFLSQFKENA
complement(1050266..1051858)       PHAGE_Gordon_Kita_NC_031233: hypothetical protein; SAG0131_04915; phage(gi100002)     2.16e-93            StreptococcusagalactiaeSTIRCD27MTYHYEPSPFMLPTSRYDKAKADRAVTFINNLSHTKGKWAGKKFDLLPWQEQIVRDLFGIVKEDGNRQFLTAYIEIPKKNGKSELAAAIALYLLYADNEASAEVYGAACDRNQASIVFDVAKQMVLMSRPLEKRSKIMGATKRIVNYSNAGFYQVLSAETGTKHGLNVSGLVFDEIHAQPNRHLYDVLTKGSGDAREQPLFFIITTAGTDKNSICYELHTKALDILKGRKKDTSFYPVVYGLSDADDWNDEANWLKANPSLGHTIGIDRVREAYQQALDNPAEENVFKQLRLNMWTSSSVAWIPEHVYAKGNSPIDYEALKGRDCYAGLDLSSTSDITAFVLVFPPRHSEENYIILPFFWLPEDTLELRCRRDHVLYDVWERQGYIKTTEGNVVHYGFIEAFIEQLSETYHIKEIAYDRWNATQMVQNLEGMGLTMVPFGQGYKDMSPPSKEFYKLMMEGKIQHGGHPVLKWMGQNVVMRQDPAGNIKPDKEKSVEKIDGIVALIMGLDRCIRHQGNGTSVYDERGLLSF
complement(1051855..1052169)       PHAGE_Gordon_Kita_NC_031233: hypothetical protein; SAG0131_04920; phage(gi100001)     3.44e-08            StreptococcusagalactiaeSTIRCD27MGKILEQIGILTEMDMTAFAGYCQAYARWKEAEEFLSKHGSIIKTPNGYLQQVPQVSISQTNLKIMLKFCEQFGLTPSARNRLATMDAEVGTGDEMEDLLGGVL
complement(1052365..1052814)       PHAGE_Bacill_SP_15_NC_031245: hypothetical protein; SAG0131_04925; phage(gi100310)     1.85e-06            StreptococcusagalactiaeSTIRCD27MDDKTLERLRKTYPTGTRVRLVHMDDPYSVPIGMLGTVEDVDDIGSLIVSWDNGQSLNVLHGIDRVVIVEPNRHDFIRSIYCYLRAGHNEFVFDSGDIPVQLTHEEVITLMTSTHPQTEIDIYIDECNHFNLKPTTVLTKEEIEKAIQE
complement(1052825..1053079)       hypothetical protein; SAG0131_04930                                                  N/A                 StreptococcusagalactiaeSTIRCD27MTKNEFNEIIDSCFIHLTVMKQHYTKPRNYSLDVIEQGNLDQINDLLNDITNGIELGGFNELEARYIYEDTEVLWAEVSQTFVR
complement(1053157..1054410)       PHAGE_Clostr_phiMMP02_NC_019421: DNA-cytosine methyltransferase; SAG0131_04935; phage(gi414090431)     6.74e-118           StreptococcusagalactiaeSTIRCD27MTLTFLDFFAGVGGFRRGLELAGMTCLGYCEKDKFARKSYEAMYDTEGEWFHDDITSIDPTRLPKADLWTAGSPCQNLSIAGKRAGLYGERSGLFFTFVDLLQSQKEEDKPEWVLLENVKGLLSSGGGRDYLDYLSILDQAGYDLEWQVFNSKDYGVPQNRERIYTLGHLRSRGRRQVLPLSGESGSHLKQLIGGMQSYRVYDPSGIATTLVGEGGGLGAKTGLYLIDQSLTEPKLTDEARCITARYTAGATKRTAMNSGVLEVQPILTPDRVIKRQNGRRLKEQDEPMFTLTSQDRHGVLEGIKVRNGTKQGYQVAELGDSVDLSYPGSQTRRARVGKGIAHNLSCGGRMGAVVWNGRVVKIRRLTPRECFRLQGFSDDLFDKAQAVNSDAQLYKQAGNGVTVTVVYTIGKAILSA
complement(1054407..1055663)       PHAGE_Strept_EJ_1_NC_005294: transferase; SAG0131_04940; phage(gi39653711)           1.81e-85            StreptococcusagalactiaeSTIRCD27MTTQPNMEIKELPLSDLKPASYNPRKKLKKGDKEYEKIKQSLLKFGYVDPIIVNDDLTVIGGHQRLTVLKDLKYETAKCVIVSLSKEDEKALNIALNKITGQWDDQPLADLLLDLQESDFNLDLTGFEPPEIDDILSNIHDKDLSEDDFDVDEELKKPTVARRGDIWQLGKHRVICGDSTEAETYEQLLGDKKANLIVTDPPYNVDVEETAGKILNDNMSDRDFYQFLFDMFTQVESHMEADASIYVFHADTEGLNFRKAFKDAGFYLSGSCIWKKNSLVLGRSPYQWQHEPCLFGWKQKGKHQWFSDRKQTTIWEYDRPKSSKDHPTMKPIQLMAYPIQNSSMRGTLVFDPFLGSGSTLMAADQTGRVCYGIELDEKFVDVIVKRYMESTSNRDVSVLRNGETLSYDQALEVMEEHS
complement(1055635..1056090)       zinc-finger protein; SAG0131_04945                                                   N/A                 StreptococcusagalactiaeSTIRCD27MNDNQRRGIWKLRRDGFGYGAIAQMLNMSLGSVKQYCRRHPKLKGMGQFVKYQLDEGERSYCKNCMKKLHHAVQGRPKKFCSNRCRAIWWRNHQSQHDKTKTAYDELTCQNCGRSFLSYANPTRKFCGHPCYVEHRFRKGVVHDNSTQYGN
complement(1056378..1056743)       PHAGE_Bacill_phi105_NC_004167: hypothetical protein; SAG0131_04950; phage(gi22855043)     5.11e-30            StreptococcusagalactiaeSTIRCD27MPRRPSTPCKQSGCPNLVSYGNKYCEIHKANHSLDAKSTKAKGYNARWNKERLRYLKLNPLCVYCQREGRLTKATVVDHITPHRGDQDLFWNQSNWQALCKTCHDRKTKTTDRYVEYTYRF
1063003..1063017                   attR                                                                                 N/A                 ACAGGAAACTTTTTT

#### region 3 ####
1567993..1569174                   PHAGE_Bacill_phIS3501_NC_019502: phage integrase; SAG0131_02895; phage(gi422934298)     2.17e-25            StreptococcusagalactiaeSTIRCD27MANKKYRGVSRDKQGRIYYQTEFKANNITGKRQRKKSYKDQFGNPFRSEKQAYDELCRVRVEFQTKDNNDGYYLSFSQYMEEVYLPYYKQTVQAVTYRTALTHHKMFVEIFGSKRLSEIDVRECEKFRIYLIEKYSPNYAKGVWIRFKHCIGYAERLGYIDEFPCKSLDNPKGKRPDTKFWTLEDLKKVVATFDLRDYEERHRFTAIWLYFFTGLRVSEGLSLIWSDIDFDKKLLHVQSTLEYEGNGVFTRKNPTKTSAGIRWIELDDETLNVLLRWRSIQVENGDDSYVLARFGKPLNKCTLSRILKRQAKKAGVEVITGKGLRHSHDSFLINVLGKDVLYVSKRSGRVDKATTLNTYSHLYDSKKASGGREISQALHKFGVSSNPTKTPLN
1569305..1569316                   attL                                                                                 N/A                 ATTAAAAAAGGA
complement(1569376..1570611)       hypothetical protein; SAG0131_02900                                                  N/A                 StreptococcusagalactiaeSTIRCD27MVNQLIILGNGFDRASDLKSGYMDFFNFRFKDSDSTSSFWYYILRSCYNKKWSSDLWSDIEKLISVHLKNIITLYNNETILSGKDIESIYIETLSTDYSRNDYSTSEELTQKALHNFLWNHNGIPIVPELDNLLLLIQKDLKIVEDEFCSYLTNQIEIQEQSKDDYFKDITNLGNNYLLKSRIIFELLYKSNISSAFTCNSFVALHDFHNENCFNSYEGFLSYIYDLESNNEFNVETSILNFNYTLPRIDKLQRNIHGTLNDKNIIFGIDYDSLIDIQKDKNVTLPVEFTKSYRILQNGNIFQYPIPSELTFIKFYGHGLGEADYSYFQSIFDSINLYSSDTVLIFYWSCYNENIREQIKSQQVHAVHKLIEKYGDTFNNKNHGRNLFTKLQLENRLIIQEILYNDILNPY
1571027..1572841                   PHAGE_Clostr_phiCT19406A_NC_030950: hypothetical protein; SAG0131_02905; phage(gi100067)     1.97e-35            StreptococcusagalactiaeSTIRCD27MSFFEKLFSKFNKKTTSDIVQFNNNSHINPFGFVDSQQMDINDNNINFIKNRFIAFDIETTGLNSQQDRIVEVGAVLFENGKVVDSYESLVNAKVNISADVTRINNITNRMIKNAPSENQVYYELVNFLGDALNGKTPVCAHNAKFDMGFLCNTLSRLGYNGEIKYLDTLSLSRKNVKGLRNYKQNTVAEYFNLQNKNSHRAKSDAIICGNILTKLFFIIENQKSRKSFSSKNNKISPEELEVCAVIQNIIFERKGDTDLVGYYKNSSGYIDVYYLYKIVRFKFTKKGKYIIVPRDLKGSENFILESCTLSEGGHDFVRLYFNSPLEVKEISSYIFEEYINTKRSATEYLNYNKNYVDEYKASPLMENVLSNTDVKNILVSINNKVYNSQNNIIEKDLIDRKDIKINPVNNRIPVSEIQNLTNWHKGFDLGFPFWEEGEKYRKEGNLKRSILLYDLARSNGYCSPALFESYAMAFHRLKDYENEIDILDEGIEREGNLGRLITRRNNAMKMLIKSRNEQKKIKENESAENILFSEIEILKRKKTRKNARPVLKMDDEMNILEHFESISDAVKKTGINSKSIRDASKGIQKHAGGFVWRYEDEYK
complement(1572967..1573536)       PHAGE_Bacter_Diva_NC_028788: transposase-like protein; SAG0131_02910; phage(gi971743572)     7.08e-52            StreptococcusagalactiaeSTIRCD27MKRLNLVSVYQKATFKPHSRGKNEAPIPNHLDRQFKQERPLQALVTDLTYVRAGNRWAYVCLIIDLYNREIIGLSLGWHKTAELVKQAIQSIPYALTKVKMFHSDRGKEFDNQLIDEILEAFGITRSLSQAGCPYDNAVAESTYRAFKIEFVYQETFQLLEELALKTEKATLFCTTFIKCCLFRFLPML
complement(1573764..1574054)       PHAGE_Bacter_Diva_NC_028788: transposase; SAG0131_02915; phage(gi971743573)          9.86e-29            StreptococcusagalactiaeSTIRCD27MSRKVRRHFTDDFKQQIVDLYNVGRKRSSLIKVYELTPSTFDKWVRQAKTTGSFKSVDNLTDEQRELIELRKHNKELEMQLDILKQAAVIMAQKGK
complement(1574244..1574840)       PHAGE_Lactob_LfeSau_NC_029068: hypothetical protein; SAG0131_02920; phage(gi985757753)     8.02e-26            StreptococcusagalactiaeSTIRCD27MTKKIFLFICATLLVGIALYTPTTSIFNHNNVYAATKKAKIKFNKTQKKIVKKAREYAKSGHMSKDSIIEKLKKDSKKYRQEDINFVINNLKVDYKKNALISAKIYSKTMNLSKQSIFEQLYSESPDKATHSDKFTKEESQYAIDHLKVDFKENALETAKSYQSSSSLSKEEIYKQLTSTLGDKFTNDEAQYAVDHLK
1575062..1575559                   phage tail protein; SAG0131_02925                                                    N/A                 StreptococcusagalactiaeSTIRCD27MIIDFKTVSTKGLETSPVAEALAGLRANEARYFWNKFKVAYETFPVSDYPELMADINHLLKNERNLVFAAKPLEISQLFLENRILWTHVFYEDGLAINILYELDNPKKRAVGLKLSDGMDIPIELADKFKFARQKSKLAGIIRGSYFTLKGESETLMQRWLDNMK
1585816..1585827                   attR                                                                                 N/A                 ATTAAAAAAGGA
