Criteria for scoring prophage regions (as intact, questionable, or incomplete):
Method 1:
1. If the number of certain phage organism in this table is more than or equal to 100% of the total number of CDS of the region,
   the region is marked with total score 150. If less than 100%, method 2 and 3 will be used.

Method 2:
1. If the number of certain phage organism in this table  is more than 50% of the total number of CDS of the region, that phage 
   organism is considered as the major potential phage for that region; the percentage of the total number
   of that phage organism in this table in the  total number of proteins of the region is calculated and 
   then multipled by 100; the percentage of the length of that phage organism in this table in the length 
   of the region is calculated and then multipled by 50 (phage head's encapsulation capability is considered).

Method 3:
1. If any of the specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber',
   'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin') are present, the score will be increased 
   by 10 for each keyword found.
2. If the size of the region is greater than 30 Kb, the score will be increased by 10.
3. If there are at least 40 proteins in the region, the score will be increased by 10.
4. If all of the phage-related proteins and hypothetical proteins constitute more than 70% of
   the total number of proteins in the region, the score will be increased by 10.

Compared the total score of method 2 with the total score of method 3, the bigger one is chosen as the total score of the region.
If the region's total score is less than 70, it is marked as incomplete; if between 70 to 90, it is marked as questionable; if greater than 90, it is marked as intact.
   


Totally 10 intact prophage regions have been identified.




                                  REGION         REGION_LENGTH            COMPLETENESS(score)           SPECIFIC_KEYWORD                             REGION_POSITION          TRNA_NUM                 TOTAL_PROTEIN_NUM       PHAGE_HIT_PROTEIN_NUM            HYPOTHETICAL_PROTEIN_NUM         PHAGE+HYPO_PROTEIN_PERCENTAGE    BACTERIAL_PROTEIN_NUM            ATT_SITE_SHOWUP                  PHAGE_SPECIES_NUM                MOST_COMMON_PHAGE_NAME(hit_genes_count)    FIRST_MOST_COMMON_PHAGE_NUM      FIRST_MOST_COMMON_PHAGE_PERCENTAGE   GC_PERCENTAGE                 
                                 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
                                  1              37.6Kb                   incomplete(40)                transposase,integrase                        319529-357196            1                        18                      9                                1                                55.5%                            8                                yes                              9                                PHAGE_Salmon_SJ46_NC_031129(3),PHAGE_Mycoba_Makemake_NC_031067(1),PHAGE_Bacill_vB_BtS_BMBtp14_NC_048640(1),PHAGE_Clostr_phiCD211_NC_029048(1),PHAGE_Pseudo_YMC11/02/R656_NC_028657(1),PHAGE_Escher_ECP1_NC_049926(1),PHAGE_Pseudo_PMG1_NC_016765(1),PHAGE_Mycoba_Charlie_NC_023729(1),PHAGE_Clostr_vB_CpeS_CP51_NC_021325(1),PHAGE_Pseudo_D3_NC_002484(1),PHAGE_Strept_phiNJ2_NC_019418(1),PHAGE_Salmon_Fels_2_NC_010463(1),PHAGE_Mycoba_Doom_NC_023704(1),PHAGE_Bacill_vB_BtS_B83_NC_048762(1),PHAGE_Lactob_iLp84_NC_028783(1),PHAGE_Mycoba_Butters_NC_021061(1),PHAGE_Ralsto_Rs551_NC_047765(1),PHAGE_Mycoba_PattyP_NC_021297(1),PHAGE_Escher_500465_1_NC_049342(1),PHAGE_Brevib_Jenst_NC_028805(1),PHAGE_Vibrio_PWH3a_P1_NC_020863(1),PHAGE_Entero_phiP27_NC_003356(1),PHAGE_Escher_HK75_NC_016160(1),PHAGE_Escher_pro483_NC_028943(1),PHAGE_Bordet_BPP_1_NC_005357(1),PHAGE_Salmon_SEN8_NC_047753(1),PHAGE_Strept_PH15_NC_010945(1),PHAGE_Pseudo_Lu11_NC_017972(1),PHAGE_Mycoba_Bernal13_NC_024135(1)   1                                16.66%                           59.42%                        
                                  2              39.1Kb                   intact(140)                   tail,viron,virion,capsid                     489437-528616            0                        54                      54                               0                                100%                             0                                no                               15                               PHAGE_Pseudo_JD024_NC_024330(23),PHAGE_Pseudo_JBD93_NC_030918(19),PHAGE_Pseudo_LPB1_NC_027298(17),PHAGE_Pseudo_JBD88a_NC_020200(15),PHAGE_Pseudo_FHA0480_NC_041851(15),PHAGE_Pseudo_D3112_NC_005178(14),PHAGE_Pseudo_JBD24_NC_020203(14),PHAGE_Pseudo_H70_NC_027384(13),PHAGE_Pseudo_MP22_NC_009818(12),PHAGE_Pseudo_JBD69_NC_030908(12),PHAGE_Pseudo_MP29_NC_011613(12),PHAGE_Pseudo_DMS3_NC_008717(10),PHAGE_Pseudo_vB_PaeS_PAO1_Ab30_NC_026601(10),PHAGE_Pseudo_JBD5_NC_020202(9),PHAGE_Pseudo_JBD30_NC_020198(9),PHAGE_Pseudo_PA1phi_NC_023700(7),PHAGE_Pseudo_MP38_NC_011611(5),PHAGE_Pseudo_MP48_NC_024782(5),PHAGE_Pseudo_JBD25_NC_027992(3),PHAGE_Pseudo_JBD67_NC_042135(2),PHAGE_Lactoc_phiQ1_NC_049805(1),PHAGE_Lactoc_LW31_NC_049806(1),PHAGE_Pseudo_phi2_NC_030931(1),PHAGE_Pseudo_JBD18_NC_027986(1),PHAGE_Aeromo_25_NC_008208(1),PHAGE_Pseudo_B3_NC_006548(1),PHAGE_Lactoc_P596_NC_049808(1),PHAGE_Pseudo_phi297_NC_016762(1),PHAGE_Lactoc_P087_NC_012663(1),PHAGE_Lactoc_AM6_NC_049807(1),PHAGE_Pseudo_SM1_NC_041877(1),PHAGE_Aeromo_44RR2.8t_NC_005135(1),PHAGE_Pseudo_vB_PaeP_Tr60_Ab31_NC_023575(1),PHAGE_Aeromo_31_NC_007022(1)   23                               42.59%                           64.46%                        
                                  3              18.4Kb                   questionable(80)              plate,tail                                   753841-772316            0                        24                      22                               1                                95.8%                            1                                no                               14                               PHAGE_Pseudo_Dobby_NC_048109(6),PHAGE_Pseudo_phiCTX_NC_003278(6),PHAGE_Escher_vB_EcoM_ECOO78_NC_041926(4),PHAGE_Entero_Arya_NC_031048(4),PHAGE_Pseudo_PPpW_3_NC_023006(4),PHAGE_Escher_vB_EcoM_ep3_NC_025430(4),PHAGE_Escher_vB_EcoM_ECO1230_10_NC_027995(4),PHAGE_Vibrio_VP58.5_NC_027981(3),PHAGE_Pseudo_YMC11/02/R656_NC_028657(3),PHAGE_Pseudo_JBD44_NC_030929(3),PHAGE_Pseudo_MD8_NC_031091(2),PHAGE_Pseudo_PMG1_NC_016765(2),PHAGE_Pseudo_D3_NC_002484(2),PHAGE_Klebsi_ST15_OXA48phi14.1_NC_049454(2),PHAGE_Vibrio_vB_VpaM_MAR_NC_019722(2),PHAGE_Klebsi_ST13_OXA48phi12.1_NC_049453(2),PHAGE_Vibrio_VHML_NC_004456(2),PHAGE_Klebsi_ST437_OXA245phi4.2_NC_049449(1),PHAGE_Burkho_AH2_NC_018283(1),PHAGE_Pseudo_H66_NC_042342(1),PHAGE_Shigel_SfII_NC_021857(1),PHAGE_Shigel_SfIV_NC_022749(1),PHAGE_Mannhe_vB_MhM_587AP1_NC_028898(1),PHAGE_Burkho_KL3_NC_015266(1),PHAGE_Salmon_SEN4_NC_029015(1),PHAGE_Pseudo_PAJU2_NC_011373(1),PHAGE_Burkho_BcepMu_NC_005882(1),PHAGE_Pseudo_phiR18_NC_041964(1),PHAGE_Mannhe_phiMHaA1_NC_008201(1),PHAGE_Halovi_HGTV_1_NC_021328(1),PHAGE_Salmon_SP_004_NC_021774(1),PHAGE_Burkho_phiE255_NC_009237(1),PHAGE_Erwini_ENT90_NC_019932(1),PHAGE_Klebsi_ST512_KPC3phi13.2_NC_049452(1),PHAGE_Escher_pro483_NC_028943(1),PHAGE_Burkho_AP3_NC_047752(1),PHAGE_Klebsi_ST437_OXA245phi4.1_NC_049448(1),PHAGE_Pseudo_F116_NC_006552(1),PHAGE_Geobac_E3_NC_029073(1),PHAGE_Salmon_SEN5_NC_028701(1),PHAGE_Klebsi_4LV2017_NC_047818(1),PHAGE_Pseudo_phi2_NC_030931(1),PHAGE_Salmon_SW9_NC_049459(1),PHAGE_Salmon_Fels_2_NC_010463(1),PHAGE_Escher_500465_2_NC_049343(1),PHAGE_Salmon_RE_2010_NC_019488(1),PHAGE_Bordet_vB_BbrM_PHB04_NC_047861(1),PHAGE_Pseudo_KPP25_NC_024123(1),PHAGE_Escher_500465_1_NC_049342(1)   6                                25%                              65.25%                        
                                  4              49.6Kb                   intact(120)                   tail,lysin                                   960472-1010089           0                        55                      54                               1                                100%                             0                                yes                              7                                PHAGE_Pseudo_JBD25_NC_027992(44),PHAGE_Pseudo_JBD18_NC_027986(36),PHAGE_Pseudo_B3_NC_006548(34),PHAGE_Pseudo_JBD67_NC_042135(31),PHAGE_Pseudo_vB_PaeS_PM105_NC_028667(30),PHAGE_Pseudo_JBD30_NC_020198(6),PHAGE_Pseudo_JBD5_NC_020202(4),PHAGE_Pseudo_JBD24_NC_020203(4),PHAGE_Escher_D108_NC_013594(4),PHAGE_Pseudo_H70_NC_027384(4),PHAGE_Pseudo_JD024_NC_024330(4),PHAGE_Ralsto_RS138_NC_029107(3),PHAGE_Burkho_BcepMu_NC_005882(3),PHAGE_Entero_Mu_NC_000929(2),PHAGE_Haemop_SuMu_NC_019455(2),PHAGE_Pseudo_DMS3_NC_008717(2),PHAGE_Pseudo_MP29_NC_011613(2),PHAGE_Pseudo_vB_PaeS_PAO1_Ab30_NC_026601(2),PHAGE_Burkho_KS5_NC_015265(2),PHAGE_Pseudo_MP38_NC_011611(2),PHAGE_Pseudo_FHA0480_NC_041851(2),PHAGE_Rhodov_RS1_NC_020866(2),PHAGE_Rhodob_RC1_NC_020839(2),PHAGE_Pseudo_JBD88a_NC_020200(1),PHAGE_Pseudo_MP48_NC_024782(1),PHAGE_Burkho_phi1026b_NC_005284(1),PHAGE_Staphy_SPbeta_like_NC_029119(1),PHAGE_Vibrio_VP882_NC_009016(1),PHAGE_Pseudo_D3112_NC_005178(1),PHAGE_Pseudo_PA1phi_NC_023700(1),PHAGE_Entero_SfMu_NC_027382(1),PHAGE_Stenot_Smp131_NC_023588(1),PHAGE_Rhodob_RcapMu_NC_016165(1),PHAGE_Burkho_phiE255_NC_009237(1),PHAGE_Aeromo_65_NC_015251(1),PHAGE_Mannhe_vB_MhM_3927AP2_NC_028766(1),PHAGE_Pseudo_LPB1_NC_027298(1),PHAGE_Pseudo_JBD93_NC_030918(1),PHAGE_Rhizob_RR1_B_NC_021557(1),PHAGE_Burkho_AP3_NC_047752(1),PHAGE_Pseudo_JBD69_NC_030908(1),PHAGE_Pseudo_D3_NC_002484(1),PHAGE_Vibrio_12B12_NC_021070(1),PHAGE_Pseudo_PMG1_NC_016765(1),PHAGE_Pseudo_PAK_P5_NC_022966(1),PHAGE_Burkho_phiE125_NC_003309(1),PHAGE_Burkho_KS9_NC_013055(1),PHAGE_Burkho_KL3_NC_015266(1),PHAGE_Pseudo_Dobby_NC_048109(1)   34                               80%                              63.88%                        
                                  5              32.1Kb                   intact(150)                   tail,portal,head,capsid,plate                1607485-1639643          0                        39                      31                               7                                97.4%                            1                                no                               21                               PHAGE_Escher_vB_EcoM_ECOO78_NC_041926(7),PHAGE_Escher_vB_EcoM_ECO1230_10_NC_027995(7),PHAGE_Escher_vB_EcoM_ep3_NC_025430(7),PHAGE_Entero_Arya_NC_031048(6),PHAGE_Pseudo_Dobby_NC_048109(6),PHAGE_Vibrio_VP58.5_NC_027981(5),PHAGE_Pseudo_phiCTX_NC_003278(5),PHAGE_Bacter_Lily_NC_028841(4),PHAGE_Vibrio_X29_NC_024369(4),PHAGE_Vibrio_vB_VpaM_MAR_NC_019722(4),PHAGE_Pseudo_PPpW_3_NC_023006(3),PHAGE_Pseudo_JBD44_NC_030929(3),PHAGE_Pseudo_PAJU2_NC_011373(2),PHAGE_Pseudo_PMG1_NC_016765(2),PHAGE_Pseudo_D3_NC_002484(2),PHAGE_Shigel_Ss_VASD_NC_028685(2),PHAGE_Phage_Gifsy_1_NC_010392(2),PHAGE_Faecal_FP_Taranis_NC_047914(2),PHAGE_Escher_P13374_NC_018846(2),PHAGE_Faecal_FP_Toutatis_NC_047915(2),PHAGE_Pseudo_YMC11/02/R656_NC_028657(2),PHAGE_Stenot_S1_NC_011589(2),PHAGE_Vibrio_VHML_NC_004456(2),PHAGE_Entero_VT2phi_272_NC_028656(2),PHAGE_Entero_DE3_NC_042057(2),PHAGE_Klebsi_ST15_OXA48phi14.1_NC_049454(1),PHAGE_Cronob_ENT39118_NC_019934(1),PHAGE_Burkho_phiE125_NC_003309(1),PHAGE_Burkho_BcepC6B_NC_005887(1),PHAGE_Burkho_BcepMu_NC_005882(1),PHAGE_Salini_M8CC_19_NC_042349(1),PHAGE_Escher_Lys12581Vzw_NC_049917(1),PHAGE_Pseudo_phiR18_NC_041964(1),PHAGE_Klebsi_phiKO2_NC_005857(1),PHAGE_Burkho_KS10_NC_011216(1),PHAGE_Salini_M8CRM_1_NC_042351(1),PHAGE_Salmon_SEN34_NC_028699(1),PHAGE_Burkho_KS9_NC_013055(1),PHAGE_Escher_PA2_NC_028449(1),PHAGE_Entero_P2_NC_001895(1),PHAGE_Synech_S_CBS3_NC_015465(1),PHAGE_Burkho_BcepNazgul_NC_005091(1),PHAGE_Pseudo_MD8_NC_031091(1),PHAGE_Bordet_BPP_1_NC_005357(1),PHAGE_Entero_lambda_NC_001416(1),PHAGE_Ralsto_RsoM1USA_NC_049432(1),PHAGE_Mannhe_vB_MhM_1127AP1_NC_047750(1),PHAGE_Pseudo_B3_NC_006548(1),PHAGE_Escher_TL_2011c_NC_019442(1),PHAGE_Pseudo_KPP25_NC_024123(1),PHAGE_Vibrio_VP882_NC_009016(1),PHAGE_Burkho_phi1026b_NC_005284(1),PHAGE_Haemop_SuMu_NC_019455(1),PHAGE_Faecal_FP_Lagaffe_NC_047911(1),PHAGE_Klebsi_4LV2017_NC_047818(1),PHAGE_Entero_fiAA91_ss_NC_022750(1),PHAGE_Bordet_vB_BbrM_PHB04_NC_047861(1),PHAGE_Entero_HK446_NC_019714(1),PHAGE_Entero_HK630_NC_019723(1),PHAGE_Aeriba_AP45_NC_048651(1),PHAGE_Escher_pro147_NC_028896(1),PHAGE_Pseudo_vB_PaeP_Tr60_Ab31_NC_023575(1),PHAGE_Escher_ArgO145_NC_049918(1),PHAGE_Entero_Sf101_NC_027398(1),PHAGE_Burkho_AP3_NC_047752(1),PHAGE_Pseudo_PS_1_NC_029066(1),PHAGE_Klebsi_ST13_OXA48phi12.1_NC_049453(1),PHAGE_Entero_HK629_NC_019711(1),PHAGE_Burkho_KS5_NC_015265(1),PHAGE_Burkho_phiE255_NC_009237(1),PHAGE_Vibrio_Valm_yong1_NC_049477(1),PHAGE_Rhodob_RcapNL_NC_020489(1),PHAGE_Ralsto_RSY1_NC_025115(1),PHAGE_Mannhe_vB_MhM_3927AP2_NC_028766(1),PHAGE_Halomo_phiHAP_1_NC_010342(1),PHAGE_Escher_vB_EcoM_12474III_NC_049457(1)   7                                17.94%                           63.30%                        
                                  6              5.8Kb                    incomplete(20)                transposase                                  2533297-2539154          0                        9                       6                                2                                88.8%                            1                                no                               5                                PHAGE_Escher_RCS47_NC_042128(2),PHAGE_Bacill_SPbeta_NC_001884(1),PHAGE_Temper_phiNIH1.1_NC_003157(1),PHAGE_Bacill_BMBtpLA_NC_028748(1),PHAGE_Plankt_PaV_LD_NC_016564(1),PHAGE_Burkho_KS5_NC_015265(1),PHAGE_Prochl_P_TIM68_NC_028955(1),PHAGE_Bacill_G_NC_023719(1),PHAGE_Bordet_vB_BbrM_PHB04_NC_047861(1)   2                                22.22%                           56.90%                        
                                  7              49.5Kb                   intact(110)                   integrase,transposase,capsid,tail            2648569-2698141          1                        65                      50                               10                               92.3%                            5                                yes                              24                               PHAGE_Pseudo_YMC11/02/R656_NC_028657(23),PHAGE_Pseudo_phi297_NC_016762(10),PHAGE_Pseudo_YMC11/07/P54_PAE_BP_NC_030909(8),PHAGE_Cronob_phiES15_NC_018454(8),PHAGE_Pseudo_PMG1_NC_016765(7),PHAGE_Escher_HK639_NC_016158(7),PHAGE_Pseudo_PS_1_NC_029066(6),PHAGE_Pseudo_phiPMW_NC_041880(6),PHAGE_Pseudo_PAJU2_NC_011373(5),PHAGE_Mannhe_vB_MhS_1152AP2_NC_028956(5),PHAGE_Entero_HK633_NC_019719(4),PHAGE_Edward_eiAU_NC_042029(3),PHAGE_Pseudo_H66_NC_042342(3),PHAGE_Pseudo_D3_NC_002484(3),PHAGE_Pseudo_phiPSA1_NC_024365(3),PHAGE_Pseudo_JBD44_NC_030929(3),PHAGE_Burkho_AH2_NC_018283(2),PHAGE_Vibrio_vB_VpaS_MAR10_NC_019713(2),PHAGE_Acinet_IME_AB3_NC_023590(2),PHAGE_Edward_eiAU_183_NC_023555(2),PHAGE_Bacill_G_NC_023719(2),PHAGE_Entero_HK140_NC_019710(2),PHAGE_Entero_mEp237_NC_019704(2),PHAGE_Pseudo_PEV2_NC_031063(2),PHAGE_Pseudo_YH30_NC_029101(2),PHAGE_Pseudo_nickie_NC_042091(2),PHAGE_Vibrio_SSP002_NC_041910(2),PHAGE_Pseudo_PaMx42_NC_028879(1),PHAGE_Pseudo_MD8_NC_031091(1),PHAGE_Shigel_SfII_NC_021857(1),PHAGE_Salmon_Fels_1_NC_010391(1),PHAGE_Pseudo_YH6_NC_027388(1),PHAGE_Entero_mEp460_NC_019716(1),PHAGE_Pseudo_H70_NC_027384(1),PHAGE_Escher_HK75_NC_016160(1),PHAGE_Altero_vB_AmeM_PT11_V22_NC_048847(1),PHAGE_Entero_phiJLA23_NC_047740(1),PHAGE_Pseudo_MP1412_NC_018282(1),PHAGE_Cronob_ENT47670_NC_019927(1),PHAGE_Mannhe_vB_MhS_587AP2_NC_028743(1),PHAGE_Vibrio_8_NC_022747(1),PHAGE_Salmon_epsilon15_NC_004775(1),PHAGE_Entero_N15_NC_001901(1),PHAGE_Entero_JL1_NC_019419(1),PHAGE_Burkho_DC1_NC_018452(1),PHAGE_Salmon_Jersey_NC_021777(1),PHAGE_Pseudo_vB_PaeP_C2_10_Ab09_NC_024140(1),PHAGE_Entero_mEp234_NC_019715(1),PHAGE_Paraco_vB_PmaS_IMEP1_NC_026608(1),PHAGE_Altero_vB_AspP_H4/4_NC_047834(1),PHAGE_Xylell_Xfas53_NC_013599(1),PHAGE_Acinet_vB_AbaS_Loki_NC_042137(1),PHAGE_Erwini_vB_EamM_Machina_NC_042056(1),PHAGE_Escher_K1_dep(1)_NC_027994(1),PHAGE_Erwini_vB_EamM_Huxley_NC_031127(1),PHAGE_Pseudo_F116_NC_006552(1),PHAGE_Cyanop_S_RIM12_NC_047716(1),PHAGE_Aggreg_S1249_NC_013597(1),PHAGE_Acinet_vB_AbaS_TRS1_NC_031098(1),PHAGE_Pseudo_AF_NC_019923(1),PHAGE_Entero_HK542_NC_019769(1),PHAGE_Staphy_47_NC_007054(1),PHAGE_Shigel_Sf6_NC_005344(1),PHAGE_Strept_PH15_NC_010945(1),PHAGE_Pseudo_LKO4_NC_041934(1),PHAGE_Pseudo_JD024_NC_024330(1),PHAGE_Entero_mEp235_NC_019708(1),PHAGE_Staphy_phi2958PVL_NC_011344(1),PHAGE_Burkho_BcepIL02_NC_012743(1),PHAGE_Pseudo_phiR18_NC_041964(1),PHAGE_Pseudo_PA26_NC_041907(1),PHAGE_Entero_HK022_NC_002166(1),PHAGE_Acinet_Bphi_B1251_NC_019541(1),PHAGE_Entero_HK225_NC_019717(1),PHAGE_Salini_SMHB1_NC_047775(1),PHAGE_Cronob_ENT39118_NC_019934(1),PHAGE_Escher_SRT8_NC_042043(1),PHAGE_Erwini_vB_EamM_ChrisDB_NC_031126(1),PHAGE_Pseudo_MP29_NC_011613(1),PHAGE_Pseudo_LPB1_NC_027298(1),PHAGE_Entero_HK106_NC_019768(1),PHAGE_Entero_HK446_NC_019714(1),PHAGE_Pseudo_vB_PaeP_Tr60_Ab31_NC_023575(1),PHAGE_Pectob_ZF40_NC_019522(1),PHAGE_Escher_ECP1_NC_049926(1),PHAGE_Cyanop_P_SSP2_NC_016656(1),PHAGE_Acinet_YMC11/11/R3177_NC_041866(1),PHAGE_Prochl_P_SSP3_NC_020874(1),PHAGE_Burkho_BcepMigl_NC_019917(1),PHAGE_Pseudo_PaMx28_NC_028931(1),PHAGE_Lactob_LL_H_NC_009554(1),PHAGE_Cyanop_P_RSM6_NC_020855(1),PHAGE_Prochl_P_SSM3_NC_021559(1),PHAGE_Rhizob_RR1_A_NC_021560(1),PHAGE_Pseudo_KPP25_NC_024123(1),PHAGE_Vibrio_K139_NC_003313(1),PHAGE_Entero_mEpX1_NC_019709(1)   23                               35.38%                           60.63%                        
                                  8              37.1Kb                   intact(140)                   tail,viron,virion,capsid                     3109466-3146603          0                        53                      53                               0                                100%                             0                                no                               14                               PHAGE_Pseudo_JD024_NC_024330(22),PHAGE_Pseudo_JBD93_NC_030918(19),PHAGE_Pseudo_LPB1_NC_027298(17),PHAGE_Pseudo_JBD24_NC_020203(15),PHAGE_Pseudo_FHA0480_NC_041851(15),PHAGE_Pseudo_JBD88a_NC_020200(15),PHAGE_Pseudo_D3112_NC_005178(14),PHAGE_Pseudo_H70_NC_027384(13),PHAGE_Pseudo_MP29_NC_011613(12),PHAGE_Pseudo_JBD69_NC_030908(12),PHAGE_Pseudo_MP22_NC_009818(12),PHAGE_Pseudo_vB_PaeS_PAO1_Ab30_NC_026601(11),PHAGE_Pseudo_DMS3_NC_008717(10),PHAGE_Pseudo_JBD30_NC_020198(9),PHAGE_Pseudo_JBD5_NC_020202(8),PHAGE_Pseudo_PA1phi_NC_023700(8),PHAGE_Pseudo_MP48_NC_024782(6),PHAGE_Pseudo_MP38_NC_011611(5),PHAGE_Pseudo_JBD25_NC_027992(3),PHAGE_Pseudo_JBD67_NC_042135(2),PHAGE_Pseudo_vB_PaeP_Tr60_Ab31_NC_023575(1),PHAGE_Pseudo_SM1_NC_041877(1),PHAGE_Pseudo_phi297_NC_016762(1),PHAGE_Pseudo_B3_NC_006548(1),PHAGE_Pseudo_JBD18_NC_027986(1),PHAGE_Pseudo_phi2_NC_030931(1)   22                               41.5%                            64.39%                        
                                  9              11.1Kb                   incomplete(30)                coat                                         3457350-3468481          0                        21                      8                                13                               100%                             0                                no                               4                                PHAGE_Ralsto_RSS1_NC_008575(2),PHAGE_Ralsto_RSS0_NC_019548(2),PHAGE_Ralsto_p12J_NC_005131(2),PHAGE_Ralsto_PE226_NC_015297(2),PHAGE_Entero_If1_NC_001954(1),PHAGE_Clostr_phiMMP02_NC_019421(1),PHAGE_Bacill_phBC6A51_NC_004820(1),PHAGE_Strept_TP_778L_NC_022776(1),PHAGE_Ralsto_RSS20_NC_021866(1),PHAGE_Xantho_Cf1c_NC_001396(1),PHAGE_Strept_TP_J34_NC_020197(1),PHAGE_Geobac_GBSV1_NC_008376(1)   3                                9.52%                            57.55%                        
                                  10             53.3Kb                   intact(150)                   tail,head,portal,terminase,lysis,integrase,transposase     5083564-5136863          1                        74                      58                               14                               97.2%                            2                                yes                              33                               PHAGE_Pseudo_F10_NC_007805(19),PHAGE_Pseudo_PMG1_NC_016765(11),PHAGE_Burkho_phi1026b_NC_005284(6),PHAGE_Pseudo_D3_NC_002484(6),PHAGE_Entero_mEp235_NC_019708(6),PHAGE_Pseudo_MD8_NC_031091(5),PHAGE_Pseudo_YMC11/02/R656_NC_028657(5),PHAGE_Entero_HK022_NC_002166(5),PHAGE_Burkho_phi6442_NC_009235(5),PHAGE_Burkho_phiE125_NC_003309(4),PHAGE_Entero_mEpX2_NC_019705(4),PHAGE_Entero_HK140_NC_019710(4),PHAGE_Shigel_SfII_NC_021857(3),PHAGE_Pseudo_PAJU2_NC_011373(3),PHAGE_Burkho_Bcep176_NC_007497(3),PHAGE_Entero_phiP27_NC_003356(3),PHAGE_Entero_mEpX1_NC_019709(3),PHAGE_Pseudo_phi2_NC_030931(3),PHAGE_Burkho_phiE12_2_NC_009236(3),PHAGE_Entero_YYZ_2008_NC_011356(3),PHAGE_Escher_HK639_NC_016158(2),PHAGE_Entero_mEp234_NC_019715(2),PHAGE_Pseudo_phiPMW_NC_041880(2),PHAGE_Pseudo_phiPSA1_NC_024365(2),PHAGE_Phage_Gifsy_2_NC_010393(2),PHAGE_Entero_BP_4795_NC_004813(2),PHAGE_Stx2_c_1717_NC_011357(2),PHAGE_Pseudo_YH30_NC_029101(2),PHAGE_Entero_HK446_NC_019714(2),PHAGE_Pseudo_JBD44_NC_030929(2),PHAGE_Escher_ECP1_NC_049926(2),PHAGE_Pseudo_nickie_NC_042091(2),PHAGE_Burkho_KL3_NC_015266(2),PHAGE_Entero_HK542_NC_019769(2),PHAGE_Entero_HK633_NC_019719(2),PHAGE_Cronob_phiES15_NC_018454(2),PHAGE_Pseudo_PEV2_NC_031063(2),PHAGE_Xantho_phiL7_NC_012742(2),PHAGE_Entero_SfV_NC_003444(2),PHAGE_Entero_mEp237_NC_019704(2),PHAGE_Edward_eiAU_183_NC_023555(1),PHAGE_Pseudo_JBD93_NC_030918(1),PHAGE_Pseudo_PS_1_NC_029066(1),PHAGE_Mycoba_Timshel_NC_041983(1),PHAGE_Pseudo_vB_PaeP_C2_10_Ab09_NC_024140(1),PHAGE_Klebsi_KNP2_NC_048647(1),PHAGE_Entero_c_1_NC_019706(1),PHAGE_Mycoba_Arturo_NC_042339(1),PHAGE_Entero_P22_NC_002371(1),PHAGE_Bacill_phi105_NC_048631(1),PHAGE_Pseudo_JBD18_NC_027986(1),PHAGE_Arthro_Galaxy_NC_041876(1),PHAGE_Pseudo_F116_NC_006552(1),PHAGE_Burkho_KS9_NC_013055(1),PHAGE_Cronob_ENT47670_NC_019927(1),PHAGE_Salmon_SEN34_NC_028699(1),PHAGE_Pseudo_YH6_NC_027388(1),PHAGE_Salmon_Fels_1_NC_010391(1),PHAGE_Bordet_BPP_1_NC_005357(1),PHAGE_Shigel_SfIV_NC_022749(1),PHAGE_Edward_eiAU_NC_042029(1),PHAGE_Entero_UAB_Phi20_NC_031019(1),PHAGE_Pseudo_H66_NC_042342(1),PHAGE_Escher_HK75_NC_016160(1),PHAGE_Paraco_Shpa_NC_041868(1),PHAGE_Arthro_Abidatro_NC_042002(1),PHAGE_Stx2_c_Stx2a_F451_NC_049924(1),PHAGE_Klebsi_phiKO2_NC_005857(1),PHAGE_Clostr_phiCT19406C_NC_029006(1),PHAGE_Mycoba_HINdeR_NC_021308(1),PHAGE_Pseudo_MP22_NC_009818(1),PHAGE_Salmon_BTP1_NC_042346(1),PHAGE_Mycoba_Bactobuster_NC_031279(1),PHAGE_Raoult_Ro1_NC_048682(1),PHAGE_Klebsi_ST437_OXA245phi4.1_NC_049448(1),PHAGE_Aeromo_44RR2.8t_NC_005135(1),PHAGE_Stenot_Pokken_NC_049463(1),PHAGE_Acinet_Ac42_NC_014660(1),PHAGE_Serrat_BF_NC_041917(1),PHAGE_Entero_HK106_NC_019768(1),PHAGE_Rhizob_RR1_B_NC_021557(1),PHAGE_Pseudo_vB_PaeP_Tr60_Ab31_NC_023575(1),PHAGE_Halovi_HCTV_5_NC_021327(1),PHAGE_Arthro_Andrew_NC_048098(1),PHAGE_Yersin_fHe_Yen9_04_NC_042116(1),PHAGE_Xantho_Xop411_NC_009543(1),PHAGE_Brucel_BiPBO1_NC_031264(1),PHAGE_Salmon_PVP_SE1_NC_016071(1),PHAGE_Pseudo_KPP25_NC_024123(1),PHAGE_Entero_cdtI_NC_009514(1),PHAGE_Pseudo_Zuri_NC_049456(1),PHAGE_Psychr_Psymv2_NC_023734(1),PHAGE_Xantho_OP1_NC_007709(1),PHAGE_Pseudo_phi3_NC_030940(1),PHAGE_Aeromo_31_NC_007022(1),PHAGE_Pseudo_phiCTX_NC_003278(1),PHAGE_Arthro_Coral_NC_048099(1),PHAGE_Cronob_vB_CsaM_GAP32_NC_019401(1),PHAGE_Arthro_Kepler_NC_048100(1),PHAGE_Pseudo_JBD25_NC_027992(1),PHAGE_Salmon_SEN22_NC_028696(1),PHAGE_Shigel_Sf6_NC_005344(1),PHAGE_Yersin_PY54_NC_005069(1),PHAGE_Bacill_SP_15_NC_031245(1),PHAGE_Salmon_SSE_121_NC_027351(1),PHAGE_Pseudo_FHA0480_NC_041851(1),PHAGE_Stx2_vB_EcoP_24B_NC_027984(1),PHAGE_Cronob_ENT39118_NC_019934(1),PHAGE_Entero_mEp390_NC_019721(1),PHAGE_Marino_P12026_NC_018269(1),PHAGE_Vibrio_X29_NC_024369(1),PHAGE_Bacill_phi105_NC_004167(1),PHAGE_Aeromo_25_NC_008208(1),PHAGE_Edward_GF_2_NC_026611(1),PHAGE_Geobac_GBK2_NC_023612(1),PHAGE_Pseudo_MP38_NC_011611(1),PHAGE_Pseudo_PA26_NC_041907(1)   19                               25.67%                           60.46%                        
                                  11             41.6Kb                   intact(107)                   tail,integrase,coat                          5305510-5347134          0                        21                      17                               0                                80.9%                            4                                yes                              8                                PHAGE_Pseudo_Pf1_NC_001331(10),PHAGE_Paenib_Yerffej_NC_048714(2),PHAGE_Vibrio_VCY_phi_NC_016162(2),PHAGE_Vibrio_VfO4K68_NC_002363(1),PHAGE_Klebsi_ST437_OXA245phi4.1_NC_049448(1),PHAGE_Bacill_BM5_NC_029069(1),PHAGE_Rhodot_RM378_NC_004735(1),PHAGE_Gordon_GMA1_NC_030902(1),PHAGE_Clostr_phiCTC2B_NC_030951(1),PHAGE_Entero_phiT5282H_NC_049429(1),PHAGE_Vibrio_VfO3K6_NC_002362(1),PHAGE_Entero_186_NC_001317(1),PHAGE_Acidia_virus_NC_029316(1),PHAGE_Gordon_Katyusha_NC_041950(1),PHAGE_Salmon_ST64T_NC_004348(1),PHAGE_Entero_ST104_NC_005841(1),PHAGE_Burkho_phi1026b_NC_005284(1),PHAGE_Salmon_SPN9CC_NC_017985(1),PHAGE_Vibrio_KSF_1phi_NC_006294(1),PHAGE_Arthro_Laroye_NC_041947(1),PHAGE_Erwini_EtG_NC_047833(1),PHAGE_Salmon_SE1_NC_011802(1),PHAGE_Bacill_phi105_NC_048631(1),PHAGE_Bacill_phi105_NC_004167(1),PHAGE_Vibrio_CTX_NC_015209(1),PHAGE_Thermo_THSA_485A_NC_018264(1),PHAGE_Bacill_vB_BhaS_171_NC_030904(1),PHAGE_Pseudo_phi3_NC_030940(1)   10                               47.61%                           58.71%                        
                                  12             15.8Kb                   intact(128)                   integrase,coat                               5937966-5953824          0                        20                      17                               2                                95%                              1                                yes                              5                                PHAGE_Pseudo_Pf1_NC_001331(12),PHAGE_Vibrio_VCY_phi_NC_016162(2),PHAGE_Gordon_Daredevil_NC_048021(2),PHAGE_Vibrio_CTX_NC_015209(1),PHAGE_Azospi_Cd_NC_010355(1),PHAGE_Bacill_Moonbeam_NC_027374(1),PHAGE_Rhodoc_E3_NC_021347(1),PHAGE_Aeromo_phiO18P_NC_009542(1),PHAGE_Klebsi_4LV2017_NC_047818(1),PHAGE_Pseudo_phi3_NC_030940(1),PHAGE_Vibrio_VfO3K6_NC_002362(1),PHAGE_Entero_186_NC_001317(1),PHAGE_Haemop_HP2_NC_003315(1),PHAGE_Bacill_phiNIT1_NC_021856(1),PHAGE_Erwini_ENT90_NC_019932(1),PHAGE_Klebsi_ZCKP1_NC_047994(1),PHAGE_Klebsi_ST13_OXA48phi12.1_NC_049453(1),PHAGE_Vibrio_KSF_1phi_NC_006294(1),PHAGE_Bacill_Grass_NC_022771(1),PHAGE_Erwini_EtG_NC_047833(1),PHAGE_Aeromo_Aes012_NC_020879(1),PHAGE_Entero_P4_NC_001609(1),PHAGE_Vibrio_VfO4K68_NC_002363(1)   12                               60%                              53.83%                        
                                  13             46.7Kb                   intact(150)                   transposase,lysis,terminase,portal,head,virion,protease,capsid,tail     6080094-6126818          0                        61                      56                               2                                95%                              3                                no                               6                                PHAGE_Pseudo_vB_PaeS_PM105_NC_028667(49),PHAGE_Pseudo_JBD67_NC_042135(43),PHAGE_Pseudo_B3_NC_006548(43),PHAGE_Pseudo_JBD18_NC_027986(41),PHAGE_Pseudo_JBD25_NC_027992(25),PHAGE_Burkho_BcepMu_NC_005882(5),PHAGE_Pseudo_JBD30_NC_020198(5),PHAGE_Pseudo_H70_NC_027384(4),PHAGE_Burkho_KS10_NC_011216(4),PHAGE_Pseudo_MP38_NC_011611(3),PHAGE_Burkho_phiE255_NC_009237(3),PHAGE_Vibrio_VP882_NC_009016(2),PHAGE_Pseudo_FHA0480_NC_041851(2),PHAGE_Burkho_KS5_NC_015265(2),PHAGE_Pseudo_JD024_NC_024330(2),PHAGE_Pseudo_JBD24_NC_020203(2),PHAGE_Pseudo_JBD88a_NC_020200(1),PHAGE_Pseudo_JBD69_NC_030908(1),PHAGE_Acinet_Bphi_B1251_NC_019541(1),PHAGE_Burkho_phiE125_NC_003309(1),PHAGE_Burkho_phi1026b_NC_005284(1),PHAGE_Burkho_phiE202_NC_009234(1),PHAGE_Entero_SfMu_NC_027382(1),PHAGE_Stenot_Smp131_NC_023588(1),PHAGE_Serrat_MTx_NC_048759(1),PHAGE_Pseudo_JBD5_NC_020202(1),PHAGE_Altero_vB_AmeM_PT11_V22_NC_048847(1),PHAGE_Escher_D108_NC_013594(1),PHAGE_Rhodob_RcapMu_NC_016165(1),PHAGE_Rhodob_RcapNL_NC_020489(1),PHAGE_Pseudo_119X_NC_007807(1),PHAGE_Altero_vB_AspP_H4/4_NC_047834(1),PHAGE_Burkho_KS9_NC_013055(1),PHAGE_Pseudo_JBD93_NC_030918(1),PHAGE_Prochl_P_TIM68_NC_028955(1),PHAGE_Burkho_AP3_NC_047752(1),PHAGE_Pseudo_PaP2_NC_005884(1),PHAGE_Burkho_phi52237_NC_007145(1)   49                               80.32%                           63.81%                        
                                  14             56Kb                     intact(113)                   tail,integrase                               6555824-6611843          0                        49                      41                               6                                95.9%                            2                                yes                              6                                PHAGE_Pseudo_Dobby_NC_048109(37),PHAGE_Pseudo_phiCTX_NC_003278(32),PHAGE_Burkho_KS14_NC_015273(11),PHAGE_Stenot_Smp131_NC_023588(7),PHAGE_Burkho_KL3_NC_015266(6),PHAGE_Burkho_AP3_NC_047752(6),PHAGE_Burkho_phiE202_NC_009234(4),PHAGE_Burkho_KS5_NC_015265(4),PHAGE_Burkho_phi52237_NC_007145(4),PHAGE_Escher_pro483_NC_028943(3),PHAGE_Salmon_SEN8_NC_047753(3),PHAGE_Ralsto_RSY1_NC_025115(3),PHAGE_Salmon_RE_2010_NC_019488(3),PHAGE_Pseudo_phi3_NC_030940(3),PHAGE_Burkho_phiE12_2_NC_009236(3),PHAGE_Ralsto_RSA1_NC_009382(3),PHAGE_Ralsto_RsoM1USA_NC_049432(3),PHAGE_Shigel_SfII_NC_021857(2),PHAGE_Pseudo_H66_NC_042342(2),PHAGE_Escher_P2_NC_041848(2),PHAGE_Klebsi_4LV2017_NC_047818(2),PHAGE_Bacill_vB_BceS_MY192_NC_048633(1),PHAGE_Mannhe_vB_MhM_587AP1_NC_028898(1),PHAGE_Shigel_SfIV_NC_022749(1),PHAGE_Faecal_FP_Lugh_NC_047912(1),PHAGE_Salmon_SEN4_NC_029015(1),PHAGE_Klebsi_3LV2017_NC_047817(1),PHAGE_Escher_PA2_NC_028449(1),PHAGE_Mannhe_phiMHaA1_NC_008201(1),PHAGE_Erwini_vB_EamP_Frozen_NC_031062(1),PHAGE_Pseudo_PAJU2_NC_011373(1),PHAGE_Pseudo_PMG1_NC_016765(1),PHAGE_Lactob_JCL1032_NC_019456(1),PHAGE_Erwini_EtG_NC_047833(1),PHAGE_Entero_mEp390_NC_019721(1),PHAGE_Salmon_SP_004_NC_021774(1),PHAGE_Vibrio_vB_VpaM_MAR_NC_019722(1),PHAGE_Erwini_ENT90_NC_019932(1),PHAGE_Entero_PsP3_NC_005340(1),PHAGE_Escher_phi191_NC_028660(1),PHAGE_Entero_VT2phi_272_NC_028656(1),PHAGE_Klebsi_ST437_OXA245phi4.1_NC_049448(1),PHAGE_Serrat_Parlo_NC_048758(1),PHAGE_Pseudo_vB_PaeP_Tr60_Ab31_NC_023575(1),PHAGE_Klebsi_ST13_OXA48phi12.1_NC_049453(1),PHAGE_Escher_ArgO145_NC_049918(1),PHAGE_Bordet_vB_BbrM_PHB04_NC_047861(1),PHAGE_Salmon_SI7_NC_049460(1),PHAGE_Salmon_Fels_2_NC_010463(1),PHAGE_Salmon_SW9_NC_049459(1),PHAGE_Dickey_vB_DsoM_JA11_NC_048077(1),PHAGE_Salmon_SEN5_NC_028701(1),PHAGE_Erwini_vB_EamM_Yoloswag_NC_047815(1),PHAGE_Mannhe_vB_MhM_1127AP1_NC_047750(1),PHAGE_Entero_cdtI_NC_009514(1),PHAGE_Salmon_118970_sal3_NC_031940(1),PHAGE_Dickey_vB_DsoM_JA29_NC_048053(1),PHAGE_Escher_500465_1_NC_049342(1),PHAGE_Escher_P13374_NC_018846(1),PHAGE_Sinorh_PBC5_NC_003324(1),PHAGE_Rhizob_RR1_A_NC_021560(1)   36                               75.51%                           62.74%                        
