gi|00000000|ref|NC_000000|  Thermus thermophilus plasmid pTMY DNA, complete sequence, strain: [asmbl_id: NC_000000].19139, gc%: 67.44%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
2758..2770                         attL                                                                                 N/A                 ACCGGGGGGAAGG
8758..10413                        PHAGE_Acinet_vB_AbaM_phiAbaA1_NC_031280: hypothetical protein; TTMY_RS11665; phage(gi100100)     1.44e-61            MALRPTEEQLKAVEAYRSGQDLKVKAVAGSGKTTTLRLMAEATPGKRGLYLAFNRSVQQEAARKFPRNVRPYTLHALAFRMAVARDEGYRAKFQAGKGHLPAQAVAEALGLRNPLLLHAVLGTLEAFLRSEAASPDPGMIPLAYRTLRAGTKTWPEEEAFVLRGVETLWKRMTDPKDPFPLPHGAYVKLWALSEPDLSFAEALLVDEAQDLDPIFLKVLEAHRGRVQRVYVGDPRQQIYGWRGAINAMDRLEAPEARLTWSFRFAETLARFVRNLTALQDRPVEVRGKAPWATRVDAALPRPPFTVLCRTNAGVVGAVVATHEVHRGRVHVVGGVEELVHLLRDAALLKKGEKRTDPHPDLAMVETWEELEALAEAGYAPAYGVLRLAQEHPDLEALAAYLERAWTPMEVAAGVVVSTAHKAKGREWDRVVLWDDFYPWWEEEAAARVNWGSDPAHLEEENLLYVAATRARKHLSLARVRGLLEAVDRMGVYRVAEEATRAYLLLSAEALRGVAMDPRVPAEHRVRALKALGYLERGEEVLDSLGKPGGRG
10471..10698                       ribbon-helix-helix protein, CopG family; TTMY_RS11670                                N/A                 MRLTVHLPEDLARLLRQTAENEGKSMSALTAEALEAYLKERRRRALGLKVLERAGKGQVAGEAHRLLEEGRRDRP
10685..11074                       type II toxin-antitoxin system VapC family toxin; TTMY_RS11675                       N/A                 MTALDTGFFLRLLEGHEEAGALWRALAEGEGEGVVSGLSLVELLRLSLKGALAKEDSELLLQAIPAVCRVVWPDWTIGERAARLSHGLYLPLVDALVLATALEAGARELWTTDADLARYEGKLRVVLLR
complement(11067..11273)           hypothetical protein; TTMY_RS11680                                                   N/A                 MFVGRKEEGRAVLLSVRAGRGVVLSAPPGYGKTALLRELLPALEAWARPYPEKARSLAQVWWPGEAPT
complement(11564..11995)           hypothetical protein; TTMY_RS11685                                                   N/A                 MRGAWFLLWGVLGLLLSGCLFFSDKPALSRSDAFPGVGKWDCKDFNGKASTMEIKRVRGGYQLDNEPAWFKRLEEGFYLVQLESRDDTLGKIYPYFWIELEGGRLHMSIASPEAIGTAPSKALRAGVELEEVMKEDSPPPSTG
12094..12285                       PHAGE_Bacill_Bam35c_NC_005258: putative protein 1; TTMY_RS11690; phage(gi38640277)     3.08e-07            MFLAPEELAAVLRVHPETVRGWIRAGKLPAQKVGKLWRIPWEEAAKLLGSEERLEEALKEVLG
12297..12926                       PHAGE_Mycoba_Mulciber_NC_031257: hypothetical protein; TTMY_RS11695; phage(gi100032)     2.35e-15            MVNGKGGVGKTTTAVNLAAILAEGGPVLLVDADPQGSASWWAGRGEMPFDLAQETDPALLLRLRRVKGYGVVVVDTPPALRSEALEAVLRAADYAVLPTPPAPLDLEALVETVRKAVRPLGVAHRVLLTRVDPRSLGEALEAQTALMEAGVPAFHAFVRAYKAHERAALDGKPITRWRGPNAREAEADYRRVAEELLRELARTPERREA
12923..13306                       ATPase; TTMY_RS11700                                                                 N/A                 MKRKRLAELVREEAGDLQEAPAPREERPREAPHGGGLEGSPPGEGQAERPLPPYLTYVRKECRLRPDQLDALTALARRLNRERRGKGERITENTLIRWAVDLLLEQYRGEKTLLKGGPAPGGREEEL
complement(13303..13530)           PHAGE_Pseudo_201phi2_1_NC_010821: virion structural protein; TTMY_RS11705; phage(gi189490604)     2.45e-17            MKPYANLSGKSGVVAYEEGPDWICVKFSDGSSYLYTYRSAGSHHVEEMKRLARQGQGLNAYINRFVRKLYASKGC
complement(13527..14099)           hypothetical protein; TTMY_RS11710                                                   N/A                 MQRPRFVADNSVLTNFVDSGRADLLYRVVGPVLGPPSIIDPDPENRVAEFNRYLHGSECDPVRAEYRRAYLKEEGRLWVLAQVTATEEEAVMDYLGRFPRLRRRRGDLEALVLAKSRGLTLLTDDGALRKAAGAEGVALMGSCGILETVVGLGLLPCPEARALYEFFKEKLNLWSKLSLECDPPRCEEVA
14242..15552                       PHAGE_Clostr_c_st_NC_007581: conserved hypothetical phage-related protein; TTMY_RS11715; phage(gi80159810)     3.34e-08            MYRYSSESTLAQKLRQARERAGLTQEEVARALGVSRELVSLWENGERVPGAAYLARLASLYGVKEKSLFSPRPLEPLEDLKVLLREEAEEGLSPKARLELQNWLDFLDAYADFLEGEGLPSPYLKRPPKEIGVYRSPLTDLRQASSRALETRKAFALGEDAIPEPYTFLEEVGILVYKASLGSEPGKSVWGAFYKHPRLGFSVLVNVDSTPGRQAFTLAHELAHAFYHHQALGIVCRREGLTPEEEALEEFANAWAAHFLVPGKALRRKAQELVKVRGRFGPEEALLLAHHFRVSYALLLFRLKNEGLIGKEELEEWKAYSPQSMAQKLGLPQGAYTLPRTRGELGLSRYPPSVLLQVRRAVLEDRLSVSEASGLLDVDSAAFRDFLAPPKREANPEVAELEEELDFTSPGRKGRAVLRKAEGRAVLEVRAALEEP
complement(15571..16509)           PHAGE_Gordon_Bowser_NC_030930: hypothetical protein; TTMY_RS11720; phage(gi100037)     3.55e-18            MSQPDPHAELFARFRRYLEMEEGRSPRTAKEYLMDAGLFARWFRERHGRPPRWEEVGSQHIRAFLASREVSPYRAGRVLASLRKLFRYLAEVEGLPLLKDPTEGVKRPKLPRRLPIYLTPPEVARLLQAAYQNRSPRVALRDWALLAFLYGTGLRLSEALALTYADLTYQDGIPHAIRVQGKGGKERVVVLSPTAQRALHQWLKHRNLEGHPTSPYIWSHTTGPNRGKPFSARAVEAMVKRVAKRAGLKDWQRITPHKLRHSYASALVEAGRGIDEVKELLGHSSISTTQVYVHVSRKRLEEAARALPDVVG
16833..17129                       PHAGE_Gordon_GTE6_NC_028665: hypothetical protein; TTMY_RS11725; phage(gi966198585)     2.38e-06            MRESTTAKGNPPEKDPLDGKLLLTYSEAAKALGLGRTTIYRLVKAGRLKVVHPTPRSARITRESLEAFLRSLEEEAKPEGAGRSVVDRAREVLRRFGL
17310..17322                       attR                                                                                 N/A                 ACCGGGGGGAAGG
17624..17922                       hypothetical protein; TTMY_RS11730                                                   N/A                 VLARKGGRPLPEPIEGDRNPHLEGRRGKGAAPGEAKPKERPEEAQRPAPPGPEGPPKPPKEARPPGRGGRGGTRCGCGGPRRRRRPLGASACPRPSPRGAG
17926..18126                       hypothetical protein; TTMY_RS11735                                                   N/A                 MGLVGEGPYYLVLRPEALALWWPKVERLLPEFPRRYEVRWYPDGSRAVVAWDLEALKVWYKRVLRG
complement(18206..19135)           PHAGE_Entero_P2_NC_001895: Old; TTMY_RS11740; phage(gi9630369)                       7.37e-11            MDDGVDAPLQEKGAGLQSLLLIALFQLYSRKFHQGSTLLLLEEPENHLHPHARRVLAQSLIIFCQGDQGDAENRHRQVVLTTHSEDFVRLSEPESLKIVRIESEEANKTSRFWQLDSLDNSPRWKRILWRNPEIVFSRHVILVEGGEVYLVPEIASKLCGEKGILDKFGVSVVRVDGKNNFRAYVEMLDKLGIGWTVVADKDYLNNCRGKDMREFVTNLIGREPTNLSDEDLIESLKSAGIFVNDRGCLEDLYSQTAEELLKGSKKDLTAMRIAEALSDGGELEELFEYTDPLVKPIERALEKVGYKRS
