gi|00000000|ref|NZ_AP018044.1|  Streptococcus pneumoniae DNA, nearly complete genome, strain: 2267947, gc%: 39.62%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
1754341..1755627                   PHAGE_Mycoba_Cali_NC_011271: gp254; CAB04_RS09385; phage(gi204305879)                1.79e-26            StreptococcuspneumoniaeMTSVVVVGTQWGDEGKGKITDFLSANAEVIARYQGGDNAGHTIVIDGKKFKLHLIPSGIFFPEKISVIGNGMVVNPKSLVKELSYLHEEGVTTDNLRISDRAHVILPYHIELDRLQEEAKGDNKIGTTIKGIGPAYMDKAARVGIRIADLLDKDIFRERLERNLAEKNRLFEKLYDSKAIVFDDIFEEYYEYGQQIKKYVIDTSVILNDALDNGKRVLFEGAQGVMLDIDQGTYPFVTSSNPVAGGVTIGSGVGPSKIDKVVGVCKAYTSRVGDGPFPTELFDEVGERIREVGHEYGTTTGRPRRVGWFDSVVMRHSRRVSGITNLSLNSIDVLSGLDTVKICVAYDLDGQRIDYYPASLEQLKRCKPIYEELPGWSEDITGVRNLEDLSENARNYVRRVSELVGVRISTFSVGPGREQTNILESVWS
1755828..1756295                   PHAGE_Pseudo_PH1_NC_031908: hypothetical protein; CAB04_RS09390; phage(gi100008)     6.39e-06            StreptococcuspneumoniaeMYYTLEEKEVFMREALREAEIALEHDEIPIGCVIVKDGEIIGRGHNAREELQRAVMHAEIMAIEDANLSEESWRLLDCTLFVTIEPCVMCSGAIGLARIPNVVYGAKNQKFGAAGSLYNILTDERLNHRVEVEIGILEDECAAIMQDFFRNRRKK
1756635..1757891                   PROPHAGE_Staphy_N315: transposase; CAB04_RS09400; phage(gi15927655)                  1.13e-64            StreptococcuspneumoniaeMEQLHFITKLLDIKDTNIQIIDVVNRDSHKEIIAKLDYDAPSCPECGNQLKKYDFQKPSKIPYLETTGMPTRILLRKRRFKCYHCSKMMVAETSIVKKNHQIPRIINQKIAQKLIEKISMTDIAHQLSISTSTVIRKLNDFHFKHDFSCLPEIMSWDEYAFTKGKMSFIAQDFNNLNIITVLEGRTQAIIRNHFLKYDRAVRCRVKIITMDMFSPYYDLARQLFPCAKIVLDRFHIVQHLSRAMSRVRVQIMNQLDRKSHEYKAIKRYWKLIQQDSRKLSDKHFYRPTFRMHLTNKEILNKLLSYSQDLKHHYQLYQLLLFHFQNKEPEKFFGLIEDNLKQVHPLFQTVFKTFLKNKEKIVNALQLPYSNAKLEATNNLIKLIKRNAFGFRNFENFKKRIFIALNIKKERTNFVLSRA
1757868..1757882                   attL                                                                                 N/A                 AATTTTGTCCTTTCT
complement(1757960..1759102)       PHAGE_Strept_phiBHN167_NC_022791: phage integrase; CAB04_RS09405; phage(gi557745680)     0.0                 StreptococcuspneumoniaeMWMEELPNGKYKFFERYKDPYTEKLKKVSVTMEKKTPQARNQAAILLQEKIKQKLGEKQHSVSNITFEKLYEEFEENWKHGVKNSTVYASKNVKKEILKQIEGDYLVRNIDRRLLQKVIDQLLQDGRSHNYVSKIKFKLNQIMKFAIRMNYIDTNEMLFVETPRKVITSDELRKKNTKYLDQKEFKLFIQNLKDEALCDYRITKYIRIAKVLFLTGMRYGELAALNYKEDIDFSKKTIHIKHTYDFRQKERTTPKTIKSDRVITAPQKVLDIIKEQIIENATNGFDTDFIFINTLGEPITNARVICALKRHGQKIGIEKNITTHTFRHSHISLLAELGIPLTAIMDRVGHSDSKTTLEIYSHVTQKMVSDISSKLDKIKF
complement(1759157..1760227)       endonuclease; CAB04_RS09410                                                          N/A                 StreptococcuspneumoniaeMEIDKVKADLKQVGKRVADLSQSITNEEQTKNAFIMPFFQALGYDIFNPLEFVPEFTADVGIKKGEKVDYAIILDGEPQILIECKSITENLTKHDSQLFRYFVTTKSKFGILTNGREYKFFTDLDEPNKMDTTPFLTIDVTDIKENQFTEIIKFHKENFDIDNIVSSASELKYLNNLKAFLTENITTPSDSFLRYLTSEIYEGRVTQNILTTFSPIIVKGFNQFITERVNEKLSAALNTSVETKVTTDIPKVEAEAEEIVEVTDEIITTPAELEVYTVVKMLARDVVSPERVFYRDNRSYFNVLVDDNIKKWVLRYRSNSKKSTIEIRDKGIFPVSTPLEVANYANEILEVIKKFS
complement(1760387..1760620)       PHAGE_Strept_phiARI0923_NC_030946: replication and recombination DNA helicase; CAB04_RS09415; phage(gi100033)     1.68e-17            StreptococcuspneumoniaeMTLAKLCEEYQVELCLFDGSNWHNSGFYNPDTNVLAIDHNLTPEQQIQVALHELGHKDHTRSEHQNARLRCEKLIGI
complement(1760633..1760896)       PHAGE_Mycoba_Xeno_NC_031243: hypothetical protein; CAB04_RS09420; phage(gi100026)     1.63e-08            StreptococcuspneumoniaeMYRLDIDKKALKQLKKLDTPTRKQILSWLAKNIENTTNPRQHGKALKANLAGYWRYRVENYRIICDIQDDKLVVLAVEIAHRRDVYK
complement(1760896..1761129)       hypothetical protein; CAB04_RS09425                                                  N/A                 StreptococcuspneumoniaeMTITINFTEKNSYITDYLNKHGIDTTTMDFDDFMALMEDIEDARAADQAYMEYLADPATYTMDEVLDELGLTREDIA
complement(1761129..1761497)       PHAGE_Strept_phiARI0923_NC_030946: hypothetical protein; CAB04_RS09430; phage(gi100032)     1.33e-39            StreptococcuspneumoniaeMFETFEKIKELAKKRGKALGQVEEDLGYGRNTLYKIKNSTPNAERIAEIANYFNVSTDYLLGRTDNPAIAGSDEFAQVNGQIIDLRKAAANTMLFDGKPLNEDDIDFITSVLSAHFKSKGER
complement(1761911..1762150)       PHAGE_Strept_phiARI0468_2_NC_031923: loader of DNA helicase; CAB04_RS09435; phage(gi100045)     2.12e-51            StreptococcuspneumoniaeMTFKEYLLKASKRDIYDDGKDFDFETIFAREILRYAHDSELETKTGFFRHLEIMNADSWFVELARSIYQDFEKSISDSH
1762215..1762406                   PHAGE_Strept_phiARI0468_2_NC_031923: ssDNA binding protein; CAB04_RS09440; phage(gi100044)     1.89e-39            StreptococcuspneumoniaeMPDIANGRERVIAFLKEKGIKKATLAVAYGFKRQEVTNILSGTTKGPRANSFILQVIEDYGIE
1762429..1762632                   PHAGE_Strept_phiARI0468_2_NC_031923: RNA polymerase binding protein; CAB04_RS09445; phage(gi100043)     1.01e-41            StreptococcuspneumoniaeMRPKRYPYSGQKESTFVKADPELVEKLLRNTSFLECLQKKPINFQIDSEEFKRLSYEAIHDTSQVTQ
complement(1762787..1762954)       PHAGE_Salmon_103203_sal5_NC_031946: exonuclease A; CAB04_RS09450; phage(gi100018)     4.84e-06            StreptococcuspneumoniaeMANTPIKPGTDNQKPGHYVEVGPRGGKVTNGHTATIGKGDRLPPTSAKGNGWKKV
1762974..1763339                   PHAGE_Strept_phiARI0131_1_NC_031901: hypothetical protein; CAB04_RS09455; phage(gi100007)     1.39e-81            StreptococcuspneumoniaeKFEKINGTWYYFDGSGYMLADRWKKHTDGNWYYFDQSGEMATGWKKIADKWYYFDVEGAMQTGWVKYKDTWYYLDAKEGAMVSNAFIQSADGTGWYYLKPDGTLADKPVFTVEPDGLITVK
1763623..1764066                   PHAGE_Lactoc_63301_NC_031017: hypothetical protein; CAB04_RS09460; phage(gi100020)     3.10e-36            StreptococcuspneumoniaeMKIRGFELVSSFTDENLLPKRETAHAAGYDLKVAVRTVVAPGEIVLVPTGVKAYMQPTEVLYLYDRSSNPRKKGLVLINSVGVIDGDYYGNPGNEGHIFAQMKNITDQEVVLEVGERIVQAVFATFLIADGDAADGVRTGGFGSTGH
1764005..1764583                   histidine phosphatase family protein; CAB04_RS09465                                  N/A                 StreptococcuspneumoniaeMQMEMQLMAFELVDLDRQGTRMKIIFVRHGEPDYRELEERSYIGFGIDLAPLSEMGRQQVQKLSKNPLLSSAEIIVSSAVTRALETASYVVCATSLPLRVEPLLHEWQVYKTGIENFETARRLFLENKGELLPNSPIQYETATEMKSRFLECMSKYREHQTVVVVAHRMLMRQFVPNEKIDFCQVIECELEI
1764597..1765958                   PHAGE_Lactob_LfeInf_NC_029058: DNA helicase; CAB04_RS09470; phage(gi985757361)       1.13e-06            StreptococcuspneumoniaeMAKKKATFVCQNCGYNSPKYLGRCPNCGSWSSFVEEVEVAEVKNARVSLTGEKTKPMKLAEVTSINVNRTKTEMEEFNRVLGGGVVPGSLVLIGGDPGIGKSTLLLQVSTQLSQVGTVLYVSGEESAQQIKLRAERLGDIDSEFYLYAETNMQSVRAEVERIQPDFLIIDSIQTIMSPEISGVQGSVSQVREVTAELMQLAKTNNIAIFIVGHVTKEGTLAGPRMLEHMVDTVLYFEGERHHTFRILRAVKNRFGSTNEIGIFEMQSGGLVEVLNPSQVFLEERLDGATGSSIVVTMEGTRPILAEVQALVTPTMFGNAKRTTTGLDFNRASLIMAVLEKRAGLLLQNQDAYLKSAGGVKLDEPAIDLAVAVAIASSYKDKPTNPQECFVGELGLTGEIRRVNRIEQRINEAAKLGFTKIYVPKNSLTGITLPKEIQVIGVTTIQEVLKKVFA
1765962..1766528                   carbonic anhydrase; CAB04_RS09475                                                    N/A                 StreptococcuspneumoniaeMTNSLKNDKIGEIFDYQIFKEGIVSYFEQFMQANQAYVALHGQLNLPLKPKTRVAIVTCMDSRLHVAQALGLALGDAHILRNAGGRVTEDMIRSLVISQQQMGTREIVVLHHTDCGAQTFENEPFQEYLKEELGVDVSDQDFLPFQDIEESVREDMQLLIESPLIPDDVIISGAIYNVDTGSMTVVEL
1766553..1766762                   hypothetical protein; CAB04_RS09480                                                  N/A                 StreptococcuspneumoniaeMKKSSILFIFILLLCIGLQYETIYYTDGSRSGAEYGLMGVSIFLALFYMIPALYFLFRIGKNGNCQRRF
1766744..1767367                   PrsW family intramembrane metalloprotease; CAB04_RS09485                             N/A                 StreptococcuspneumoniaeMPKKVLILSLLGGMFLSGWLSSFANTYIHDLLGVLFPDSTFLNAFESAIVAPLVEEPLKLLPLVFVLALIPVRKLKSLFLLGIASGLGFQMIKDIGYIRTDLPEGFDFTISRILERIISGIASHWTFSGLAVVGVYLLYRAYKGQKVGKKQGLIFLGLALGTHFLFNSPFVELETELPLAIPVVTAIALYGFYHAYCFVEKHNELMT
1767512..1768480                   PHAGE_Salmon_7_11_NC_015938: putative ribose-phosphate pyrophosphokinase; CAB04_RS09490; phage(gi345461227)     1.42e-20            StreptococcuspneumoniaeMSFSDLKLFALSSNKELAERVAQEIGIELGKSSVRQFSDGEIQVNIEESIRGKHVFILQSTSSPVNDNLLEILIMVDALKRASAESVNVVMPYYGYARQDRKARAREPITSKLVANMLEVAGVDRLLTIDLHAAQIQGFFDIPVDHLMGAPLIADYFERRGMVGSDYVVVSPDHGGVTRARKLAEFLKTSIAIIDKRRSVDKMNTSEVMNIIGKVEGKTCILIDDMIDTAGTICHAADALAEAGAVEVYASCTHPVLSGPATDNIQKSAIKKLVVLDTIYLPEERLIDKIEQISIAHLLGDAIVRIHEKRPLSPLFDIEKKI
complement(1768617..1768895)       PROPHAGE_Staphy_N315: transposase; CAB04_RS09495; phage(gi15927655)                  8.94e-06            StreptococcuspneumoniaeMEQLHFITKLLDIKDPNVQILNIINKDTHKEIIAKLDYDAPSCPECGNQLKKYDFQKPSKIPYLETTGMPTRILLRKRRFKCYHCSKMMVAET
1779178..1779192                   attR                                                                                 N/A                 AATTTTGTCCTTTCT

#### region 2 ####
2059124..2059828                   PHAGE_Bacill_G_NC_023719: gp309; CAB04_RS11095; phage(gi593777765)                   7.28e-09            StreptococcuspneumoniaeMKALILAAGLGTRLAPITNEVPKSLVPVNGKPILMKQIENLYQNNITDITIIAGYKSSVLTDAVTEKYPEINIIDNVDFKTTNNMYSAYLGKAAMGDSDFLMMNADVFYDASVIKSLLLHKAPNAIVTDLGIYIEESMKVVEKNGRLVEISKQISPEETLGASIDVYKFSYEAGARFFEKCKEFIEDKRELQMWSEVALNAILSEVEFVACPLEGRWLEIDNHEDLVAAEKLFA
2059843..2060676                   haloacid dehalogenase; CAB04_RS11100                                                 N/A                 StreptococcuspneumoniaeMKLTNRVDYFGADISELQNKKLFLFDMDGTIYEEDRLFEGTLELLDYIHNIGGEYIFITNNSSKSVVDYVEKVNRLGIKAERDNFFTSAQATIVYIKENYPKSKVYCQGTKSLIKELSDAGIDVTEQVSADIDVVLVGFDTELTSDKIRNTCEILSTKDVPFIATNPDIRCPVSFGFIPDCGSICDMISKSVDRKPVYIGKPEPTMVDIVRKKLNYSLFETVVIGDRLYTDIMTGINAGVTSVCVLTGEATVNDIQQDSIKPTYTFKNVKEMWKGIV
2060836..2061705                   PHAGE_Entero_phi92_NC_023693: Phi92_gp066; CAB04_RS11105; phage(gi726646999)         4.74e-130           StreptococcuspneumoniaeMKGIILAGGSGTRLYPLTRAASKQLMPVYDKPMIYYPLSTLMLAGIRDILIISTPQDLPRFKELLQDGSEFGIKLSYAEQPSPDGLAQAFIIGEEFIGDDSVALILGDNIYHGPGLSTMLQKAAKKEKGATVFGYHVKDPERFGVVEFDENMNAISIEEKPEYPRSNYAVTGLYFYDNDVVEIAKSIKPSPRGELEITDVNKAYLDRGDLSVEVMGRGFAWLDTGTHESLLEASQYIETVQRMQNVQVANLEEIAYRMGYISREDVLTLAQPLKKNEYGQYLLRLIGEA
2061706..2062299                   PHAGE_Entero_phi92_NC_023693: Phi92_gp065; CAB04_RS11110; phage(gi726646998)         7.06e-09            StreptococcuspneumoniaeMTDNFFGKTLAARKVEAIPGMLEFDIPVHGDNRGWFKENFQKEKMLPLGFPESFFAEGKLQNNVSFSRKNVLRGLHAEPWDKYISVADGGKVLGSWVDLREGETFGNTYQTVIDASKGIFVPRGVANGFQVLSDTVSYSYLVNDYWALELKPKYAFVNYADPSLGIKWENIAEAEVSEADKHHPLLKDVKPLKKEDL
2062312..2063361                   PHAGE_Entero_phi92_NC_023693: Phi92_gp067; CAB04_RS11115; phage(gi726647000)         6.59e-87            StreptococcuspneumoniaeMTEYKNIIVTGGAGFIGSNFVHYVYENFPDVHVTVLDKLTYAGNRANIEEILGNRVELVVGDIADAELVDKLAAQADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETKYNPSSPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILSGIKPKLYGEGKNVRDWIHTNDHSSGVWTILTKGQIGETYLIGADGEKNNKEVLELILKEMGQAVDAYDHVTDRAGHDLRYAIDASKLRDELGWKPEFTNFEAGLKATIKWYTDNQEWWKAEKEAVEANYAKTQEIITV
2063427..2064278                   PHAGE_Entero_phi92_NC_023693: Phi92_gp064; CAB04_RS11120; phage(gi726646997)         1.24e-34            StreptococcuspneumoniaeMILITGANGQLGTELRYLLDERNEEYVAVDVAEMDITDAEMVEKVFEEVKPTLVYHCAAYTAVDAAEDEGKELDFAINVTGTKNVAKASEKHGATLVYISTDYVFDGKKPVGQEWEVDDRPDPQTEYGRTKRMGEELVEKHVSNFYIIRTAWVFGNYGKNFVFTMQNLAKTHKTLTVVNDQYGRPTWTRTLAEFMTYLAENRKEFGYYHLSNDATEDTTWYDFAVEILKDTDVEVKPVDSSQFPAKAKRPLNSTMSLAKAKATGFVIPTWQDALQEFYKQEVR
2064375..2064800                   PROPHAGE_Pseudo_KT2440: ISPpu15, transposase Orf2; CAB04_RS11125; phage(gi26990787)     1.44e-11            StreptococcuspneumoniaeMAHSFGSASIIAHTIHQKFNLKVPNYRQEEDWARMGLPITRKEISNWHIKASQYYLESLYNLLRERLLTQPLLHADETSYRVLESDSHLTYYWTFLSGKAENQAITLYHHDQRRSGLVVQEFLGDYSAYAIAVQGLGARRR
2064737..2065252                   PROPHAGE_Pseudo_KT2440: ISPpu15, transposase Orf2; CAB04_RS11130; phage(gi26990787)     5.59e-16            StreptococcuspneumoniaeMPRRLFCLCDSSSRFRSKATLSLVNCEPLEAYCQLEEAELVGCWAHVRRKFFEAPSKQADKSSLGAKGLAYCDQLFSLERDWEALPADERLQKRQEELQPLMEDFFAWCRRQSVLSGSKLGRAIEYSLKYKETFKTILKDGHLVLSNNLAERAIKSLVMGRSKGVQWTLLA
