gi|00000000|ref|NZ_AP019773.1|  Bartonella quintana strain MF1-1 chromosome, complete genome. 1588683, gc%: 38.76%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
complement(234306..235058)         PHAGE_Bacill_G_NC_023719: gp245; MF1_RS00880; phage(gi593777701)                     1.76e-16            BartonellaquintanaMSLHFDNATLGYVNRVAIKNFSAKLKTGSLVAITGDNGAGKSTLLKAIAGLIKPIRGKITKPKKSRIAYLAQQCDIDRTFPIDVRALIKTGLWSFCGLWKNQRPYYSKIQNALEMVGLTALATRSLDTLSSGQLQRALFARIIVQDADIILLDEPFNGVDRNTQKDLLALITHWQQQGRTILTALHDPLIVQKHFPQIIQIDKQNAFYGKTTQFFNETIHPVTRPLTTNSFRTSALNQYFSINDSRSIWL
235746..235970                     PHAGE_Gordon_Gsput1_NC_030932: minor tail protein; MF1_RS00885; phage(gi100055)      1.64e-17            BartonellaquintanaMPVTIYSKPSCVQCDATRRAFDAKGINYRVVDISRDEQAYSFVQSLGYRQVPVVVCGKSHWSGFRPDMISGLCV
235970..236368                     PHAGE_Erwini_pEp_SNUABM_01_NC_048807: hypothetical protein; MF1_RS00890; phage(gi100189)     2.34e-31            BartonellaquintanaMGLIVYYSSATGNTEYFVSQLGQRLFKIDKKKPSVLVDEPYVLVVPTYADGEGRMAVPKVVIRFLNECENRKLIRGVIGGGNRNFGCYYNLASKIIAEKCFVPCLYRFELRGTNEDVICVKKGLERFWKQLV
236350..238500                     PHAGE_Erwini_pEp_SNUABM_01_NC_048807: hypothetical protein; MF1_RS00895; phage(gi100190)     0.0                 BartonellaquintanaMETVGIEQSQKSEHITDYHALNAMLNLYDEDGRIQFDMDRLAARQYFLQHVNQNTVFFHNLKEKIDYLIEEGYYEKTLFELYDFSFIKKLFKRAYAFKFRFPTFLGAFKYYTSYTLKTFDGKRYLERYEDRICLVALYLAQGNKSLAESFVDEIITGRFQPATPTFLNAGKKQRGELVSCFLLRIEDNMESIGRSVNSALQLSKRGGGVALCLTNLREAGAPIKKIENQSSGVLPVMKLLEDSFSYANQLGARQGAGAVYLHAHHLDIMKFLDTKRENADEKVRIKTLSLGVVIPDITFELAQNNEDMYLFSPYDIERVTGKPFSDISLTEHYRSFVDNAKIRKKKINARVFFQTLAEIQFESGYPYILFEDTANRANPIAGRISMSNLCSEILQVSEASELETDLTYRTIGSDISCNLGSMNIAKAMESTNFGRTVEIAVRALTAVSDMSNIACVPSIAKGNAESHAIGLGQMNLHGFLAREQIYYGSLEAIDFTNIYFYTVAYHAIRASNLIARERQKVFAGFEKSAYADGSFFTKYIEKEWKPQCVLVQELFARNNIVIPDQKDWQELKKLVIEYGLYNRNLQAVPPTGSISYINYATSSIHPIASKIEIRKEGKIGRVYYPAPYMDNTNLNFYQDAYEIGPEKIIDTYAVATQHVDQGLSLTLFFPDTATTRDINRAQIYAWKKGIKSIYYVRLRQVALSGTEVDGCVSCSL
238512..239486                     PHAGE_Mycoba_Bongo_NC_041970: putative DNA methylase; MF1_RS00900; phage(gi100108)     2.90e-176           BartonellaquintanaMTKITTKNPVVCAVNWNRLHDEKDLEVWNRLTGNFWLPEKVPLSNDIPSWASLTEEERKLTVRVFTGLTLLDTIQNTVGAISLMADAITEHEEAVLTNIAFMEAVHARSYSSIFSTLCSTVEVDDAFRWSEENIHLQKKARLVLERYEASDPLKKKIASTLLESFLFYSGFYLPMYWASRAKLTNTADLIRLIIRDEAVHGYYIGYKFQLGFAKLNEVKKQEIKDFSFNLLFDLYNIECKYTEDLYDALGLTEDVKVFLHYNANKALMNLGFEPLFPPEVCRVNPAILAALSPSSDENHDFFSGAGSSYVIGKAVATTDDDWEF
complement(239483..240349)         peptide chain release factor N(5)-glutamine methyltransferase; MF1_RS00905           N/A                 BartonellaquintanaMNDYSLKSIIRQTQEKLRIQRIPEANLDAKILVEWITGTNASVRILHPDLCLSFEQITQLEQAIQRRINGEPVYRIIGKREFYGISFALSQETLEPRPDTETLVDLVLPLLKKYVDKLGKTTLLDMGTGSGAIAIAILKQIPQSYATAVDISKDALKTAIKNAKNAKVIHRFTPLLSNWFDSVTDRFDLIISNPPYIPEKDIKNLAKEVRLHDPLRALIGGKDGLHFYRKLAHEARNYLKTKGSLAVEIGHSQEKEVCDLFEKNGFQFLEMRRDLSGIPRALLFTCNH
complement(240346..241425)         PHAGE_Pseudo_73_NC_007806: hypothetical protein ORF037; MF1_RS00910; phage(gi148912865)     3.52e-09            BartonellaquintanaMVSLPKDRMRQLEKRFEIIESQMAKNPDAGTYVKLASEYADLQPIVTSIRTLNALSIEITELETIISDKLTDVEMRNLAQEELPPLFQKMEKLEKELQILLLPKDITDEKSAIIEIRAGTGGSEAALFVGDLFRMYERYANAYNWKVEVISLNEGEVGGYKEIIATISGKGVFSKLKFESGVHRVQRVPETETSGRIHTSAATVAVLPEAEEIDIEIRPEDIRIDTMRASGAGGQHVNTTDSAVRITHIPTGIMVVQAEKSQHQNRARALQILRARLFDIEQKKAESERSASRKNQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDRILEGDLDELINALISDYQTALLTEMDGNG

#### region 2 ####
complement(514808..516115)         PHAGE_Burkho_phi1026b_NC_005284: gp59; MF1_RS01990; phage(gi38707949)                3.59e-44            BartonellaquintanaMEKEAVLAPYDTKKRVLSIISSASGNLVEWYDFYVYSFTSIYFASQFFPSDGDVVTELLKSSVVFFIGFLMRPIGGWLFGFIADRYGRKRSLLISVFMMCGGSFLIALLPTYETIGATAAVLLILLRMVQGLSVGGEYGTTATYMSEIALKNHRAFFSSFQYATLIGGQLLASLVMFILALYLTEDQLKAWGWRIPFAIGGLGAIVAIYLRRSLHETTTKESRSQQQAGSLIGLLRNHKKAFFLVIGFTAGGSLTFYTYTTYMQKYLITTSGFDKHTATTIMTAALFVFMLLQPLFGSLADRIGPKASLLIWSVLSILFTIPGLRLIGNTSNTWSALLIVIGMLCIMSFYTSVSGIVKAEMFPASIRAMGVGLSYAIANALFGGSAETVALEFKKIGYESVFHFYIVGMMVIAFIAILLMPNARKKGYLQGDDIY
516325..517119                     PHAGE_Deep_s_D6E_NC_019544: thymidylate synthase; MF1_RS01995; phage(gi423262375)     9.83e-122           BartonellaquintanaMKTYLDLLSHVLNKGIDRTDRTGVGTRSVFGYQMRFDLQIGFPLLTTKKLHLRSIIYELLWFLRGDTNVAWLKEHGVSIWDEWADEKGNLGPIYGYQWRSWPASDGRYIDQISRLLTMIKKVPDSRRLIVSAWNPALIEEMALPPCHCFFQFYVADDKLSCQLYQRSADIFLGVPFNIASYALLTMMIAQVSGLKAGDFIHTLGDAHLYSNHFEQARYQLSRTPNALPSMLINPSVTDLFSFKFEDFELLNYEAQPHIKAPVAV
517116..517637                     PHAGE_Erwini_vB_EamM_ChrisDB_NC_031126: hypothetical protein; MF1_RS02000; phage(gi100062)     2.88e-34            BartonellaquintanaMTFPVCLIAAVAENGVIGCEGAMPWHLSTDLQRFKALTFGKPIIMGRKTWDSLGRALPGRTNIVITRNYAFMAEGAVIAHSLSEACFIAKRVASQNGADAVFIIGGGEIFQQGFNIADKIFLTEVLASIEGDSFFPVFDREMWTIVQTQYIPEGDKDSHRTRFVVYERNNNHL
517747..518892                     PROPHAGE_Escher_Sakai: FtsH protease regulator HflK; MF1_RS02005; phage(gi15834404)     1.49e-35            BartonellaquintanaMPWTNQNGGGPWIGDKNKVGGDRKKTAKNLFGSGGNSGGDNSPNIDDILRKGQDQFKQFGRNGLFVLFLLLAVFFWLYQSFYIVQQNEQAVELRFGVPKTGIIGDGLHFHFWPIETYMKVPLTEKTIAIGGQSGQRQQSEGLMLSSDQNIVNINFSVYYRISHPGQFLFNVNDQEGTVRQVAESAMREVIGSRPVDDVLRDKKEEVANDVRKIIQLTVDKYQLGVEISRVSISEAAPPTKVAAAFNSVQQAEQERGRMIEEGNRVRFNKIGLANGEASRTREIAKGEKAQMIEEATGRAERFRAIAREAAISPEAARYRLYMETIGRILSSPNKLILNQENSPAVPYLPLNELLRSTSSEKAKKTSAQSTSLLDSHISGGH
518895..519842                     PROPHAGE_Escher_Sakai: FtsH protease regulator HflC; MF1_RS02010; phage(gi15834405)     2.59e-32            BartonellaquintanaMQQSRFLFMFSAIVFVLMVFWVSIFIVYPRQQVAIKRFGQIVKVESDPGIYLKMPFVDKMIVVDNRLLRYDVPTQSVQVRGGAYYEVDAFFIYRITDPKLFLQRIASGRPQIAARENLAPRFIDALRAVYGKREFKAALSDERGAMMAEVQRQFSVDAGSLGITIVDVRIRKTDLTDAVSEDVYRQMAAEREAAAENIRARGQQERDRIVAEANREYEEIVAAAKRDAEITRGEGQAKSIRLLLNAREANPSFYDFWLAMEQYKNLEHTPMVISPHQDFFLYFRNLPRANGKFPPTMNNTENTRVSKTVPKFGGE
520011..521528                     PROPHAGE_Shewan_MR-1: serine protease; MF1_RS02015; phage(gi24375430)                1.49e-75            BartonellaquintanaMGRDVIDKNTSVKCFFIRIFICFVLFLSGSISFSWAGKENNTPLSIPDLAAELLETVVNISTAQTVDGTEQDEHILVPVIPEDSLLKEYFSDFFTPKDGQKDRQFQKVRSLGSGFVIDALRGLIVTNYHVIVDADEIEVNFTDGTKLEARLLGKDSKTDLALLQVDAGSKKLKAVRFGDSEKARIGDWVMAIGNPYGFGGSVTVGIISARNRDLNAGPYDNFIQTDAAINRGNSGGPLFDRNGEVIGINTAIISPSGGSIGIGFAIPSDMALSVINQLRSFGEIRRGWLAIRIQPVTEDIAKSLKLENAVGALVAGKMEQTGVDNSQLQIGDIILCFGKTKIKHARDLPRLVAESPAGKVVDITVFRNGQEKTVKVKLGRLIETDANENIVEESDDEKNGAGSKSVTMQFMGMTLSELTADLRQRYSITDKLQGLVVTSVAKNSAADKKRIRTGEVIVDINQSAVTTIYEAKKRVHKLREAGHKNALFIVARSDGELRFVTLSMD
