gi|00000000|ref|NZ_AP024599.1|  Helicobacter pylori strain 3401 chromosome, complete genome. 1591853, gc%: 38.79%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
complement(39062..39532)           PHAGE_Entero_RB16_NC_014467: Dam DNA adenine methylase; CPY3401_RS00155; phage(gi304373796)     1.94e-25            HelicobacterpyloriFNHMIRFNSKGLFNLPVGNVDFNENVYNALKNYIDFMQQNTIIFHNDDYIDFLNHTTYLKNDYVYFDPPYLISNSEYNKLWDSDNEIALYGVLDSLDKKGVLFGITNLVYHKGETNFILKEWAKKYYIFNIKSNYISYNDNTIKEDSQEIFVTNYR
complement(39585..40844)           PHAGE_Geobac_E3_NC_029073: transposase; CPY3401_RS00160; phage(gi985758480)          5.09e-61            HelicobacterpyloriMSAISITHKIALKPNNKHITYFKKAFGCARFAYNWGLAKWKENYQLGIKTSHLQLKKEFNALKKSQFNFVYEVTKYATQQPFIHLNLAFNKFFRDLEKGLVSYPKFKKKREFQGSFYIGGDQIKIIQTANTDYLKIPNLPPIKLTEKLRFQGKIHNATITQKGDHFYVSISCDIDESEYKRTHKLQESHNKLGIDIGIKSFVSLSNGLNIYAPKPLDKLTRKLVRISRQLSKKIHPKTKGDKTRKSNNYLKHSKKLTHLHEKIANIRLDFLHKLTSSLIRHSNSFCLESLKVKNMFKNHRLAKSLSDISMSVFNTLLEYKAKYSNKEILRADTYYPSSKTCSNCQKVKQDLKLKDRIYQCLECGFELDRDINAAINLLKHLVGRVTAEFTPMDLTALLNDLSNNRLATSKVELGIQQKS
40518..40529                       attL                                                                                 N/A                 TTTCTTTTTAAA
complement(40819..41472)           PHAGE_Microc_Ma_LMM01_NC_008562: putative site-specific integrase-resolvase; CPY3401_RS00165; phage(gi117530307)     2.77e-72            HelicobacterpyloriMNKRMLSIGQASKLLGVTIQTLRNWDKKDLLKPDELTKGGERRYKLESLRRINRSIVFNQDELKTIAYARVSSHDQQDDLIRQVQVLELYCARCGFNYEVIQDLGSGMNYYKKGLTKLLNLILDNQVKRLVLTHKDRLLRFGAELVFSICEAKGVEVVIINKGDENVRFEEELAKDVLEIITVFSARLYGSRSKKNKKLLDEMQEVITNNVSYLNHA
complement(41560..41987)           PHAGE_Salmon_SEN34_NC_028699: methyl-directed repair DNA adenine methylase; CPY3401_RS00170; phage(gi966201453)     3.36e-05            HelicobacterpyloriLKKGIRSPFFYVGDKYKLMPQLNKLFPNNINQFIEPFVGGGSVFTLRLKDTWLTTILILSICIKLASSILVSFLMNCLKSSFIMACLSLLRGLQPLMNKNNIKLTTPNTIKLMKNGLILTPIKTTCSICIYFFMGG
complement(41984..42985)           PHAGE_Agroba_Atu_ph07_NC_042013: hypothetical protein; CPY3401_RS00175; phage(gi100189)     2.94e-21            HelicobacterpyloriMEKFNLKNRRHIGSKTKLIEWVFGSLKLNNIKSVCDIFAGSGVVAGQFATIPNIKNIIINDILFSNEIIYHAFFMGQDADFKVLEELKEYYTQALKLEENYFSQHFSDKFFSYKDCVKIGSIREHIESLNLDKLNKDILLTSLIYSMDKIANTVGHYEAYRKKEILQDRFIFELISPIKHDKNIMIERKNANELAKTLKIDLVFIDPPYNSRQYSRFYHLYENLVQWKKPKLYGTALKPLCENMSEYCRSNAKKELSDLIEKLDCKRIALTYNNTYNSKSSSSQNKIGFKDLVEILSQKGKLSVKEKAHSFFNSGKTDFKEHKEFLFIVEVKP
complement(43042..44109)           LptF/LptG family permease; CPY3401_RS00180                                           N/A                 HelicobacterpyloriMRLFRFVGWYYFKYFLIVLLALELFFVGIDSLKYADKMPDSANMIILFFTYDILFALNYTLPISLLLAMVLFYIAFIKSNQYTALLSIGFSKCQILSPIFLISLFFTAVYVGLNATPFVYMEEKTQNLIYKDNSLSVSEHLLVKYNDDYVYFDKINPLLQKAQNIKVFRLKDKTLESYAEAKEAFFEDKYWILHDTIIYEMPLSFELGNNALNTTHLKTFKTLKNFRPKVLDTIYQNKPAVSITDALLSLHALVRQNADTKKVRSFLYVFAILPFFVPFLSVLIAYFSPSLARYENLALLGLKFIIITLVVWGLFFALGKFSISGILIPEIGVLSPFFLFLALSLWYFKKLNKRL
complement(44119..44679)           aminoacyl-tRNA hydrolase; CPY3401_RS00185                                            N/A                 HelicobacterpyloriMTLLVGLGNPTLRYAHTRHNAGFDILDSLISELDLSFTFSSKHNACLCVYKDFIFLKPQTYMNLSGESVLSAKNFYKTKELLIVHDDLDLDLGVVRFKNGGGNGGHNGLKSIDLLCSNSYYRLRVGISKGMGVVEHVLSKFHKNEEPLKNAVFEHAKNALKFFIESHDFNAMQNRFTLKKPLKIES
complement(44689..45225)           50S ribosomal protein L25/general stress protein Ctc; CPY3401_RS00190                N/A                 HelicobacterpyloriMLEGVIRESITKANAKALKKDGYLIANVYGKGVENVNGAFKLNPFIKYLKEKKHLIFPVKLGDKTFEVVVQEYQKNPVTNELIHVDLLAVTKGVKSKFKVPVKHQGTPVGLKNKGILMLSKKRISVECAPEHLPDHYLVDVAPLDVNESILVRDLEKHENVKILDHDSIAVIGVIKAK
complement(45280..46230)           PHAGE_Synech_metaG_MbCM1_NC_019443: TalC transaldolase-like protein; CPY3401_RS00195; phage(gi418487351)     1.64e-07            HelicobacterpyloriMQEFSLWCDFIERDFLENGFLKLINKGAICGATSNPSLFCEAITKSAFYKDEIAKLKGKKAKEIYETLALKDILQASSALMPLHEKDPNNGYISLEIDPFLEDDAPKSIDEAKRLFKTLNRPNVMIKVPASESGLEVVSALTKASIPVNVTLVFSPKIANKTAQILAQEAQKRAVISVFVSRFDKEIDPLVPKNLQAKSGVINATECYYQINQHANKLTSTLFASTGVKSHSLAKDYYIKALCFKNSINTASLEALNAYLLDPNTEYQTPLKITEIEAFKKELKAHNIDLENTAQKLLKEGLIAFKQSFEKLLSSF
50838..50849                       attR                                                                                 N/A                 TTTCTTTTTAAA
