gi|00000000|ref|NZ_AP024617.1|  Shewanella algae strain TUM17386 chromosome, complete genome. 4911443, gc%: 53.07%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
988259..988780                     PHAGE_Bacill_G_NC_023719: gp349; K5631_RS04285; phage(gi593777805)                   4.38e-14            ShewanellaalgaeMAIILGVDPGSRITGYGVIQCQGRHQIYLGSGCIRTSCEDLPSRLKQIFDGLSEIIRQYQPEQFAIEKVFLAKNADSALKLGQARGAAIVAATVANLPVAEYTATQIKSAVVGTGRAQKTQVQHMIQQLLKLPSAPQADAADALAVAVCHYHTCQSLVALGGRATARSYGRYR
988777..989394                     Holliday junction branch migration protein RuvA; K5631_RS04290                       N/A                 ShewanellaalgaeMIGRLQGILLEKQAPEVLLDVHGVGYELQMPLTSFYELPELQQSTTLYTHFVVREDAQLLYGFITKQERALFRLLIKANGVGPKLALTILSGLTAQEFVSCVERDDIATLVKLPGVGKKTAERLLVEMRDKLKSLMEASSGNEREFVLKSNFTPVEAPNSAEEDAIAALLSLGYKPAQASKAVSSAFVEGIDSETLIKAALKSML
989430..990434                     PHAGE_Cronob_vB_CsaM_leB_NC_048645: DNA helicase; K5631_RS04295; phage(gi100044)     8.18e-06            ShewanellaalgaeMIEADRLIQPQSSPQEELIDRAMRPKLLDEYTGQNEARAQLKVFIQAAKNRQEALDHMLIYGPPGLGKTTLAMIVANEMGVNIKSTSGPVLEKAGDLAALLTNLEPGDVLFIDEIHRLSPVVEEILYPAMEDYQLDIMIGEGPAARSIKLDLPPFTLVGATTRAGALTSPLRARFGIPLRLEFYNVDDLSTIVARSANMLELQMDSDGAREIARRARGTPRIANRLLRRVRDFAEVKHDGRITKLVAEQALDMLDVDGEGFDYMDRKLLLAIIDKFMGGPVGLDNLAAAIGEERETIEDVLEPFLIQQGFIQRTPRGRIATARAYSHFEMIKPE
990636..991667                     PROPHAGE_Escher_EDL933: putative transposase; K5631_RS04300; phage(gi15803522)       6.14e-112           ShewanellaalgaeMAILAPLCRAERKRMQKLIQKTNDKHFARRLIAMLMLHQGLPVTQVQHITGAARSSIGRWLDWYTQCGIDGLKSEKPGRPTVLPINLILLCLSLLIQLCPEDFGYQRSRWSSELLAKVINAQLKLCVAASTIRRLLPEAGIVWRRSAPTLRIKDPYKAEKMAAINQALEQCSAEHPVFYEDEVDIDLNPKIGADWMPKGQQKRVVTPGNNRKHYLAGALHTKTGKVLYVSSASKASELFIAVLEKLKRHYRKAKTITLILDNYIIHKSRKTLAWLKSNPKFRLLFQPVYSPWVNKIERLWLALHETVTRNHSCRNMRELLGKVWHFMETVSPFPGNGHGIAKM
991763..992785                     PROPHAGE_Shewan_MR-1: IS110 family transposase; K5631_RS04305; phage(gi24375433)     1.03e-77            ShewanellaalgaeMEQIIGIDLAKRVFQVNIVSAQGEKKANKMITREKLTAFIVQQPPSRIVMEACGSANYWSRQFRQYGHEVKQISPQYVAPFRMGSKNDKNDAAAIVEADSRPGMRYVPEKSIEQQDIQCLHRVRQRLMKNKTALINQIRGLGLEYGIAIPEGAHKIMAHLPEHLEDAENELTTLSRELFHEMLQELQDNQQRIKTLDLRLALISQQNEDTLRLKSIPGIGPLGASALTVALGDSADFQNGRHFASYLGLVPKEHSSGGKVRLLGITKRGDGYLRGLLIHGARSVVYRVINLPEERCGGLQRWLKGIIARSGVNKAVVALANKNARIAWALINQKTEYIVK
complement(993006..993791)         alpha/beta hydrolase; K5631_RS04310                                                  N/A                 ShewanellaalgaeMENSGSDKRPYLILVHGALANAEMWQPHLPHLENEFEIIPVNLRHFTGQTDGGFGLNTHADDLYTQINKLPQKKALYLAGWSYGSDVILNLLLKHSVMPTGIFLYEPGYPGALEGQVMQSWGEDANNMFAPIFERVAKGELAAAVEALIDGSGGKPGYFSRQAEDIRKPQLALAYTLPMQLNQTESPAITKDALKASRLPKTCTLIIAHGSDTRALFRLVSEQTSNLVESAQLRVVIDATHMLPLEAPERLAELIKKSLLS
complement(993877..994374)         NYN domain-containing protein; K5631_RS04315                                         N/A                 ShewanellaalgaeMSDQRGRVLILVDVQNVYYTTRQALGRNLNYNRLWSRVTRQRQLVKAFAYAIDRGDKKQREFQNILRAIGFEVKLKPFIQRADGSAKGDWDVGITIDALEYADVVDTIVLLSGDGDFALLAEKLRQKGKRVEVYAVPELTSLALINAASEFFPIEGELLLGSEPG
complement(994429..994863)         PHAGE_Pseudo_PaMx11_NC_028770: putative acetyltransferase; K5631_RS04320; phage(gi971741816)     3.34e-06            ShewanellaalgaeMIRSFTKEDMYPLLEIWLTASIDAHDFIAADFWQSQLDNMRRVYIPAAENYVYQHGAEVLGFYSLYENSLAALFVKPAMQGLGIGSRLLEHARQQREQLTLSVYCDNQASVDFYQRRGAVIIGEQTCADTGHREYSMQLTGLRP
995381..997600                     PHAGE_Klebsi_ST16_OXA48phi5.4_NC_049450: methyltransferase type 11; K5631_RS04325; phage(gi100001)     1.60e-07            ShewanellaalgaeMIDDFLFSSETSPEEPHQRDNKWRILAVDDDVKFQNSLSFAINKMTLMGRPLELIQAYSMAEASSLLGKDADFAVVLVDVVMETEDAGLRLVKAVRDLLGISDTRFVLLTGQPGMAPAESVMQDYDLSDYVLKSDLASRGIRNILTGAVRNYHQLKTISSARRGLQLIVESSNRLLGLRTLAQIASVTLSEIANLIDVPDEGLVCVNRGRHSADGSGQEIFEPMTIACSGRFRQYANRALRELPDPTIQSMVEQALREKRFVSTDESQVLFFPKSAALAEFAIYVATDRTLDDTEMELLKVFAANVSKGFGNVALISRLDKIAYQDELLGIPNRSALLRELSRLQAMSSASAHNLLLLDLDHFSGLNNLFGSVFGNQVLQAVAQRLQEVFPQPTVIGRLHSDLFAVIGHKEQVNIDRAQRVFSAPFEIDNSRHILTACMTEVSLAISGQDPAELLRTAGTGLRNAKSRGPGSIQAFDPEFEHQAAHRFKLMQRLHTAIQRQEFVLHFQPQIDLKSGEVVGVEALLRWQTEDGMVPPGTFIPLAEQSSYIHGIGDIVVALSCQAVHALDQAGFTDILVSLNYSARQLDKPDVLDRLKQQCRLAGVEPSRLCLEVTETAMMQSFQQVAKILQRHRAWGGTVAIDDFGTGLSSLEYLLQLPADHLKIDMTFVARLDEDERSRFLASMIIELGRRLNISVVAEGVETRSQANWLRDNGCHIAQGWLYGKAMPLDELLLWLSKR

#### region 2 ####
3921660..3922586                   PROPHAGE_Escher_Sakai: FtsH protease regulator HflC; K5631_RS17465; phage(gi15834405)     6.47e-06            ShewanellaalgaeMFAFTIFILFVLFILYKLMLIVPMREVHVIERLGKFRTVLQPGFHFLIPFFDRVAYRHDTREQVLDVPPQSCISKDNIQLEVDGLVYLKVMDGKLASYGIEDYRLAAVNLAQTTMRSEIGKLTLSQTFSERDALNEAIVREIDKASDPWGIKMLRYEIKNISPSRHVIHTLEKQMEAERRKRAEITLASAEKEAMINLSQGERQEAINISEGQKQKRINEAQGTAQEIAIVANAQAESMAMVAKALAVNGGNEAMNMQLKEQFIEQVGEILQKADISVVPTELAKMEGFFEGIQQVSNTAAGSKGARK
3922583..3923530                   PROPHAGE_Escher_Sakai: FtsH protease regulator HflK; K5631_RS17470; phage(gi15834404)     1.02e-06            ShewanellaalgaeMNLGQIDTDMIVLGIWGLIFLIFIVKLFQSIRLVPTKSAYIVERLGKYHMTLDAGFHALLPFIDKVAYIHDLKEETIDVPPQECFSSDEVNVEVDGVIYISVVDPVKASYGVTDYRYAAIQLAQTTTRSVIGTLELDRTFEERDLISAKVVEVLDQAGASWGIRVHRYEIKNITPPETVKNAMEMQVNAERERRALLAKSEGDKQSKINRSEGLKQEMINHSEGEMQRRINEAEGKAEEILAIARATAGSIEKLAEVIAAPGGKNALRMQLGEQYLAQLSGLSKPGSKIVLPGNMVDFESWMASIGLTEEKAPDT
complement(3923595..3924860)       transcription termination factor Rho; K5631_RS17475                                  N/A                 ShewanellaalgaeMNLTELKNKSIADLVALAEEMKLENMARARKQDIIFSILKAHAKSGEDIFGGGVLEILQDGFGFLRSADGSYLAGPDDIYVSPSQIRRFNMRTGDTIFGKIRPPKEGERYFALLKVNEVNFDKPENSRNKILFENLTPLHAEERLRMERGNGSTEDITARILDLCSPVGKGQRGLIVAPPKAGKTLLLQNIAQSITYNNPEVVLMVLLIDERPEEVTEMQRLVQGEVIASTFDEPASRHVQVAEMVIEKAKRLVEHKKDVVILLDSITRLARAYNTVVPSSGKVLTGGVDANALHRPKRFFGAARNIENGGSLTIIATALIDTGSKMDEVIYEEFKGTGNQELHLSRKAAEKRVFPAIDFNRSGTRREEKLTTPDELQKMWILRKILNPMDEVSAMEFLIDKLAMTKTNEEFFTAMKRTKS
complement(3925073..3925399)       PHAGE_Achrom_Motura_NC_049849: tail length tape-measure protein; K5631_RS17480; phage(gi100057)     2.59e-19            ShewanellaalgaeMSDKIVYLSDDSFENDVLKSELPVLVDFWAEWCGPCKMIAPILDDVAEEYAGKLTIAKLNIDQNNASPVKYGVRSIPTLLLFKNGELVANQVGALSKTQLKEFIDAQI
3925553..3926866                   PHAGE_Bordet_vB_BbrM_PHB04_NC_047861: hypothetical protein; K5631_RS17485; phage(gi100025)     9.44e-07            ShewanellaalgaeMSETHLSQQKFAELPLHPEVIQALAENGFEYCTPIQALSLPVLLQGKDIAGQAQTGTGKTLAFLVATFNHLLSTDIPAERQLNQPRAIIMAPTRELAIQIAKDATLLSKHTKLKVGIVYGGEGYDAQRKVLDKGVDILIGTTGRIIDYVRQGVINLSAIQAVVLDEADRMFDLGFIKDIRFLFRRMPDAKDRLNMLFSATLSMKVQELAYDHMNDPVKVEIAPEEKTSKNIKEELFYPSMKDKIPLLLTLIEEDWPDKAIVFANTKHQCENLWGWLEGDGHRVGLLTGDVPQKKRLKILELFTKGDLDILVATDVAARGLHISDVSHVYNFDLPDDCEDYVHRIGRTGRAGAKGVSVSFACEEYALNLPAIEDYIKHSIPVTSYDAEALLDDIPAPVRIHRKHAGPRNSRDRGQGRPQGAHRSGGRPPRHDRTRRHS
3926867..3927796                   exopolyphosphatase; K5631_RS17490                                                    N/A                 ShewanellaalgaeMPKPAYAAITLGSNSFNMLVARTVGGQPKVLAKYKRKVRLAEGIEADGSLNLAAFERGLDCLAMFANMLVEHQVDDANVAVIATATLRCISNADEFNRRALQILGHPIEIICGMREAELIYQGMVATTHGEGRRLVIDIGGASTEFIVGDGEKVLFKTSLPIGCVTYNQCFFTSAPLQPLDFDDVRDRVDLALAEHKSTLKALGWHSVVGASGAVQSVVEVLLHRQESETLTLTVLESLKQELLAQESLTLNGISGLCPERAPTFASGIAILLALFELLGIERLHLSGGALREGVLQMLAKRQSLAPAQ
complement(3927883..3928419)       PHAGE_Acinet_YMC13/03/R2096_NC_027332: hypothetical protein; K5631_RS17495; phage(gi849248853)     1.82e-05            ShewanellaalgaeMHQNVKALLATTALFFSCQVMANGGCGFEDKQEGFIATCSEEKQEVILTGAVEAQKLVTELPEFSSGYQSYQVETDALAPIKAVDKATEIVVIIGTWCPDCHRETPRFIRIMEQVANPNIQVRYIGVDRQKKDPEGLAAQYDFQRIPTFIVLQDGKEIGRIVERPEVSLEQDLAKILK
complement(3928623..3929633)       porphobilinogen synthase; K5631_RS17500                                              N/A                 ShewanellaalgaeMNIITSAYPQRRMRRMRKHEFSRRLMAENQLTVNDLIYPMFVLEGNKRTESVASMPGVERYSIDLLLKEAEELVELGIPLIALFPVTPAEKKSLMAEEAYNPDGLVQRAVRELKAEFPQLGVMTDVALDPYTTHGQDGIIDETGYIINDITTEILVKQALSHAAAGADMVAPSDMMDGRIGAIRQALEAAGHVNTQIMAYSAKYSSNYYGPFRDAVGSAGNLKGGNKHSYQMDPANSDEALHEVALDIQEGADMVMVKPGMPYLDIVRRVKTELGVPTFAYQVSGEYAMHMAAIQNGWLAEKAIVMESLLCFKRAGADGILTYFAKQAAQWLKDAK
complement(3929630..3931531)       PHAGE_Klebsi_ST16_OXA48phi5.4_NC_049450: methyltransferase type 11; K5631_RS17505; phage(gi100001)     1.89e-15            ShewanellaalgaeMANAYSVLLLFCSLLSLAVNAEPSVEVSASKGLDSDLRPSARVTEQGPDSRLSQVLNLPDSAWHPANDYSFVDMGTDGLWFNFSLYADEPGSFNRILAFNNPSMDRLEVYHYVNGRLKRQLTLGDTQPFGHRSILSTDFLYAFDIRQQEQHQFWLKLTTAGSSYLPIHLWEPYALLQSHETRNMLNGIQLGALAAIGLFALFIAVTTRSFSYSYYAGYVLTMTLLVACINGTAFRYLWPNVPQLQQYVIPLLVPLVIAFGILFTEKVLQLKYHSIRMLRACRYTAACAILLMFATVLIDYALAIYIEIISVMSVSLMLLIFSILQAVRGNKLAKLYTVSWSGMTLGIFVSCLMYLGLIKLPLMPQTPVLLGLTFEVVFMAAVLAIRYNDERKAKQRIQQEALKQAERIREAREETLRMEAESNEKLERMVQERTLELEIALRELNEANQKLTEQATIDSLTGVKNRSTFDKRLQAEGRISRRQQTPLALLMLDIDRFKTINDKHGHLAGDQTLKSIADTLKNILRRPSDLVSRFGGEEFAIILPNTDTSGALRVAEQIRHAISALDVSWDKQTIPLTASIGVSVAIIESDMHITQLLEQADKALYRAKNSGRDRVYAFDPEQDTLSDPARSPK

#### region 3 ####
4675274..4675288                   attL                                                                                 N/A                 GCCGGTGGCAAGTTG
4685082..4685246                   PHAGE_Pantoe_vB_PagM_PSKM_NC_048767: putative phosphoesterase; K5631_RS20840; phage(gi100037)     2.04e-05            ShewanellaalgaeMLNGLVISINDNKHQACPVCGGKDRFRFDDKDERGISVSQIAVTDRRWCVMPLA
complement(4685300..4685389)       integrase core domain-containing protein; K5631_RS20845                              N/A                 ShewanellaalgaeVELWREHYNHVRPHSSLNYMPPVKYAKQAA
complement(4685541..4685903)       hypothetical protein; K5631_RS20850                                                  N/A                 ShewanellaalgaeMNKLSIGCAIIFSLLVSGCTVRVADLTVGSTKNVNLNSGQLVKGERVTGEDSYGVFLFPFGIPNVKTAMDRAIETNKCAVGLTDVVVTQLNHSFIIGTIGLRVEGDLLIDQSKEGCKKSI
complement(4686130..4686206)       tRNA                                                                                 N/A                 GGCCCCTTAGCTCAGTTGGTTAGAGCACACGACTCATAATCGTTAGGTCCCCAGTTCGAGTCTGGGAGGGGCCACCA
complement(4686387..4688234)       PHAGE_Klebsi_ST13_OXA48phi12.1_NC_049453: hypothetical protein; K5631_RS20860; phage(gi100004)     0.0                 ShewanellaalgaeMDQTPQSQLKLLLAKGKEQGYLTYAEVNDHLPADMVDSDQIEDIIQMINDMGIRVFEEAPDVDDIMMSEDSTDEDAAEEAAAALASVESELGRTTDPVRMYMREMGTVELLTREGEIQIAKRIEEGINTVQSSVAEYPQAIAMILEQFDQFEAEEIRLSDIISGFVNPDEDDVGPSATHIGSELSDDDLDDEDDMDDDDEDDDSDSEDEGSKGPDPEEARERFGQLRTVYENSLKLIELKGRDHPESVAALFHIGEIFKEFRLVPKQFDRLVKSMRSMMDKVRVQERLILKLCVEQAKMPKKNFVKLFTGNETDISWFNAEMNSGKPYAEGLKMVEEDVLRCRAKLEAIEAETGLSIASIKDINRRMSIGEAKARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRISRQMLQEMGREPSPEELAERMMMPEDKIRKVLKIAKEPISMETPIGDDEDSHLGDFIEDTTLELPLDSATSESLKSATHEVLAGLTAREAKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLRHPSRSEILKSFLDE
complement(4688368..4690095)       PHAGE_Klebsi_ST13_OXA48phi12.1_NC_049453: hypothetical protein; K5631_RS20865; phage(gi100003)     0.0                 ShewanellaalgaeMAIPRDFINELIARTDIVDLIDHKVPLKKAGKNYSACCPFHSEKSPSFTVSRDKQFYHCFGCGAHGNAIDFIMEYDRLEFLDAIEELASQLGLEVPRENNPNRRRDEGLSRDLYQLMEEANRFYQSQLRQHQDKQKVLDYLAFRGLSDQVVERFGIGFAPDGWDGLLSRYRSQQESQDKLLTAGMIISNDNGKRYDRFRDRLMFPIRDRRGRVIAFGGRVLGDGTPKYLNSPETPIFHKGNELYGLYELKQAHREPRQVLIVEGYMDVVALAQFGVDYAVASLGTSTTAEQFQLLLRSAKEVVCCYDGDNAGKEAAWRALETALPLLKPGDTVRFMFLPQGEDPDSMVRKTGKEAFEALIDEAQTLTGFLFDTLTTKYGTDKGNLAKQAIALIEKIQDTVLQNLLLEDLSHRLGMNSADDLKKKLGFKGPQGVAPARHKALKGRGTPLRLAVALLVQHPQLGLNLIPQPALKHLQMAGIDLLVELLDLTRAQKMNSAQLLEQFRDTDEFSALRKLAQWEHQVADENLEQEFKKSLVWLNNQYIEQRYQELSLKQTHTKEEKIQLKKLIAAMKSRQ
complement(4690176..4690619)       PHAGE_Bacill_G_NC_023719: gp509; K5631_RS20870; phage(gi593777964)                   4.62e-14            ShewanellaalgaeMSLIDKLKDQMKQALVAKEKVRLGTIRMALAAIKQIEVDTRETLNDEQIIAVLTKMVKQRRDAIAQYEAAGRPELAEAEAAEIQVIETFLPQPLSESEIAALIDAAIQDSGASTMADMGKVMGALKSKVQGRADMGAISAQIRAKLQ
complement(4690626..4690841)       PHAGE_Klebsi_ST13_OXA48phi12.1_NC_049453: hypothetical protein; K5631_RS20875; phage(gi100002)     2.07e-37            ShewanellaalgaeMPIIKVRENEPFDVALRRFKRSCEKAGILADVRAREFYEKPTTARKRAKAAAVKRLAKKLSRENARRVRLY
4691038..4692054                   PHAGE_Klebsi_ST147_VIM1phi7.1_NC_049451: hypothetical protein; K5631_RS20880; phage(gi100043)     0.0                 ShewanellaalgaeMRVLGIETSCDETGIAVYDEEQGLLSHALYSQVKLHSDYGGVVPELASRDHVRKIVPLIREALAKADTRIEDLDGIAYTKGPGLIGALLVGACVGRSLAFAWNKPAVGVHHMEGHLLAPMLEEDAPEFPFVALLVSGGHSMLVKVEGIGRYEVLGESIDDAAGEAFDKTAKLMGLDYPGGPRLAKLAAKGEKAGYKFPRPMTDRPGLDFSFSGLKTYAANTIAAEPDDEQTRANIARAFEEAVVDTMVIKCRRALEQTGFKRLVIAGGVSANTRLRSSLAELMQSRGGKVFYPRGEFCTDNGAMIAYAGLQRLKAGEREPLAVKGQPRWPLDTLEAIS
4701972..4701986                   attR                                                                                 N/A                 GCCGGTGGCAAGTTG
