gi|00000000|ref|NC_000000|  Mannheimia haemolytica D193 Cont8, whole genome shotgun sequence. [asmbl_id: NC_000000].118225, gc%: 41.29%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
89635..89651                       attL                                                                                 N/A                 AAAAACGACCGCTTGTT
complement(97795..98091)           PHAGE_Entero_933W_NC_000924: Bor protein precursor; L277_RS115930; phage(gi9632515)     6.20e-15            MKKLLAMSVLTALLTTACTTQTAHIGGKVTDNIKPTKSVTQSFFIGGIGQEETLNVVEVCGSKDKVQQVETVLSGGDILLGLVTIGIYTPRTANVYCK
complement(98116..98394)           PHAGE_Entero_lambda_NC_001416: Bor protein precursor; L277_RS115925; phage(gi19263395)     2.35e-22            MKKLLAIATVFSLAACSTQTLELSPAKEAQYDRVQHFFVSGLAQKQEIDAAKICNGADKVGKVETETTFFNGLLGTITYGIYSPRQIRVYCN
98554..100530                      PHAGE_Lactoc_Q54_NC_008364: putative ribonuclease; L277_RS115920; phage(gi115304286)     1.98e-29            MFQNNPLLAQLKQQIEASKEYVAGVVKASDKAFGFLECDKKSYFIPPAEMKKVMHGDSVKAVVKRDGDKEQVEIDSLLEPMLDRFIAQVRLNKEGKLQLAVDHPSIKQTIPANTHKKATEKLENGDWVVAQLKTHPLRDDRFFFAQVTQFICKESDNFAPWWVTLARHEQPREPVANEKNYELHDELAREDLSHLYFTTIDSPSTQDMDDALFIEPIKQNGKRTGWRLVVAIADPTAYIPENSHIEKAARQRCFTNYLPGFNIPMLPRELSDDLCSLVPNEKRPALVGFIETDLNGNLIKETTFTSAWVESKDRLAYDDVSDYLEGVENAWQPQSEETKQQIEWLHQFTQARIQWRAENALLFKEQGDYTFELNEDGSVKDIHVEYRRIANQMIEESMILANICCAKFLSQHAKTGVFNTHSGFDPKNYELVKSFLLQTLASDENRDELAERYSAERLATLEGYCQMQRDIQDYPEKFLELRLRRYLTFAEFKAEVAPHFGLGITDYATWTSPIRKYGDMVNHRLIKQVLLGKQSQAVEESVLSRLQEARRQNRLVERDIADWLYARYLAPMVEQAVEFECEIADVSRGGLRAKVIKNGAQIFVPFSSLHDNKEEMEYRQEELALYIKGEKAYQIGQAVKVKLTEVRLETRSIVGNII
100622..101422                     PHAGE_Salmon_SP_076_NC_021782: NinI protein; L277_RS115915; phage(gi525972760)       2.20e-12            MATYIVGDLHGCFNEFQLLLEKVNYNPKQDELFLTGDLVARGEDSLACLRFVKDSANNAKTVLGNHDLHLLGIKRVKPNDKIDAIFEAKDRLDLQNWLRNQPLVIHHPKHQFLLTHAGISPEWDLATTLACAKEAEKVLQSDNYADYIAQMYENKPERWSEDLQGVERWRYIINVFTRMRFCYTDKRLDFDCKLPLEQAPQELLAWFDLDNPLFTQKNIIFGHWASLMGKCTRPNIYALDTGCAWGSHLTMLRWEDKQIFTQKRLK
101486..101562                     tRNA                                                                                 N/A                 GCGACTATAGCTCAGTTGGTTAGAGCACCACCTTGACATGGTGGGGGTCACTGGTTCGAGTCCAGCTAGTCGCACCA
101790..102788                     PHAGE_Mannhe_phiMHaA1_NC_008201: integrase; L277_RS115905; phage(gi109289985)        0.0                 MATIIKNGNKYRAQVRKKGIYKTATFSTKTEANRWAYALEAQIDAGEYNTTPNILFAELIDKYLKEVTPTKRGKREERYRLLRIAGSNLGNIPLPALTKEHLRQWQNQRLQEVQPVSVSRERATLSALFTKAMEWDYLKENPLKTLEKIKTPPARTRRYSDEEIDKLIFVSGYSPNQPPLLMQQRAGAALLFAIETAMRAGEIAGLKWEHINLQARTAFLPQTKNGYSRTVPLSTKAIAILNQLAQLEPNKQNSVFQLTSRSLDSNFRKLKQKANLHNADLHFHDTRREALTRLSKYLTVMELAKVSGHRDLSILQNTYYNPDISELVSKLQ
103066..103248                     PHAGE_Mannhe_phiMHaA1_NC_008201: hypothetical protein; L277_RS115900; phage(gi109289984)     2.14e-34            MAMSRNEIQAKSEAKRGIKQKSFKLPLEVIAEIEVLSQKLNIPQNQLIIQAIQQFKQNNP
complement(103301..103518)         PHAGE_Mannhe_vB_MhS_535AP2_NC_028853: methyltransferase; L277_RS1000000128870; phage(gi971749623)     3.15e-11            MIKKIILDACCGSRMFHFNKHNPSVLFADNRESLYRKFMLSNTNLSMGIKAVNITKRIGWHLRWIITIICAA
complement(103518..103808)         PHAGE_Mannhe_phiMHaA1_NC_008201: hypothetical protein; L277_RS115895; phage(gi109289983)     2.32e-66            MEQLQAVSNEQVFAKLCEVERLLKTKGVNEHSRELWDLGDVAAYFGYTKEHTSRSVVSSPHFPKPIALDGLRGKGRGAKKWVSGEVVKFCLMWKVK
complement(103783..104052)         PHAGE_Mannhe_phiMHaA1_NC_008201: hypothetical protein; L277_RS115890; phage(gi109289982)     1.14e-59            MKNKMGSKFIRVRVEHPQRKKEDIELVQDVVAYHIFNLFKFEESGLRGFSQYDLEIDVKVKPVLEQKEMPVDVWIDDLGGKNGTITSGQ
complement(104042..104374)         PHAGE_Mannhe_phiMHaA1_NC_008201: hypothetical bacteriophage protein; L277_RS115885; phage(gi109289981)     7.80e-59            MREWEKQMPFSANLHIRPTGKFEVKNVNIEQIIGERGKNYGNFDDVATMSQQLKAVLLDTNTQLKPHQKEAGEMICLKLARIFAGCNPDYEDNWRDIAGYAVLGGKLNEK
complement(104385..104837)         PHAGE_Mannhe_phiMHaA1_NC_008201: single-stranded DNA binding protein; L277_RS115880; phage(gi109289980)     3.96e-108           MNLVTLVGRLGQDPDIRTMQNGEKAAALSVATSEKWTDKQTGVKKESTEWHRVVLYRRLAEIAELYVKKGHLVSIIGKIKTRKWTDSNGVERSITEIIAEQMQMLSSGEKNTPNTPNKAENKPQPKQKNQDVMTADEQKDIPQFDDDIPF
complement(104837..105169)         PHAGE_Mannhe_phiMHaA1_NC_008201: hypothetical protein; L277_RS115875; phage(gi109289979)     2.23e-74            MVKFIRLNLINYFIEKDEYGEPVRCRAFRYDEIIQTKFIEGFREGEIPADDYGFEDWNGSVLILNEEGRKYFENYLFDVKKNYCRARDNYVYVLETLDEIEMKLGLLEAK
complement(105182..107542)         PHAGE_Mannhe_phiMHaA1_NC_008201: replication protein A; L277_RS115870; phage(gi109289978)     0.0                 MNYQNEILSATEAFAIGVSLPPVAGASACALELHSDRLYQAFKQPYTSMVQQELFSKDPIHEPLRQSYFERLPRALAEHFGRQYKQKLHYQSQYDTADWFKAEMARKMPRIEAVISQYCDVFDFLKQSHQDLDFLAELDSNVYFGAGVDTQQAVQKIKQDAEVKGIQLPMHLCRLENSSRYLKAHGIRPLAYQTEEQIKQLALGIAYRVRQIQQDNIEQNMHKATDGDTAYSVLLECYRAMMGEVNKLKIDSPYQKKARKGRLTEEEITTGFLKMTCEKWWTRKLSKIAEQMKEHLAIACGMVNMLSPYCSNARLKAFEAQRKANIDYLKSMIIANIAEPEEQLSLFETWLKSASNPKIKRLELLTRMNGFERYADKQGHEGWFITLTAPSKYHAMLSRTSSVNPKWNGASPAETQVYLVNTWAKIRAKLNREGVMAYGFRVAEPHADATPHWHLILFTRPEDMEKLRRVFLSYALEVDGTEAGAKKYRCKFKRIEKEKGSATGYLVKYVSKNIDGFGMDGELSDEANIQAKENAARVGAWSSVWCIRQFQQLGNIPISLWRELRRLGSVEQEDETLEKLRVIADSGEWDVFTEELGGALVKRADLVARITYTERKSETGEALYTMYQEPSLKVSGIINIKNGVQINTRPKEWSIQLKPKNWEEQQLQKKLENATETERAEVKRKYYEKLGFNEEAIALLGELAPPWTCVSNCTGSKNNQISEEARNCLRNELITMRGRVTEHQIDDLLNGKRLKIWGNSQKTMFVSYSRGRLIEHIVDNYESFLN
complement(107539..107871)         PHAGE_Mannhe_phiMHaA1_NC_008201: hypothetical protein; L277_RS115865; phage(gi109289977)     9.61e-79            MSQITKSAYTHIHPNWQAPRGNTYRIERYELKRRYALFCNGERVVLYKDPTHPNKNVESHIESDVLLLWLLKNELGWSGNIKEPLSPQDVENIRLLEQAFCLTYNGTFIK
complement(107868..108110)         PHAGE_Mannhe_phiMHaA1_NC_008201: hypothetical protein; L277_RS115860; phage(gi109289976)     1.09e-53            MSLITVNDYKIKKDILDADGKPCYQLYQGEELLRDTTNLSEIIAYMFIRAEDKPFDELYNHIINQEAGAKTDIKFTVTVR
complement(108262..108555)         PHAGE_Mannhe_phiMHaA1_NC_008201: hypothetical protein; L277_RS115855; phage(gi109289975)     1.01e-68            MDFVATYQKIRINTNHKQFTCNHLGEIWGKENDDFKRFLLRVAFLQDNPEPKPWGAYSPQEKRLLHSFSLWLEQIADFQRVMKRESKLREKHINAPD
complement(108568..108900)         PHAGE_Mannhe_phiMHaA1_NC_008201: hypothetical protein; L277_RS115850; phage(gi109289974)     9.81e-72            MSKQLYYRHKSRWNRLNRLKKMNKRRLNLFLQEKRVANLESRLADEVELAKLNSEQIGDLLQALELKVNRLIRQNEKLKARVIKLEKVKQTQKQGLFAMFKKVLGSKGNP
complement(108983..109255)         PHAGE_Mannhe_phiMHaA1_NC_008201: hypothetical protein; L277_RS115845; phage(gi109289973)     5.07e-62            MNLDHTCTNCKSKNLRVRTSEKIGLLTIQAVTYCNNCGTEQLVQSQIIRVRTPIYKERPEAMRINKCLMEADLNTPDLFDGVVADQPKQD
109388..109633                     PHAGE_Mannhe_vB_MhM_587AP1_NC_028898: hypothetical protein; L277_RS115840; phage(gi971753899)     1.15e-50            MNTEDQIIELTVEVENLRHQLNAKNIILDDLKGRLTDYQRKRLDRLFERSRRQYLNDLDLEEEQAEALEAICNELESFLAN
complement(109732..109944)         PHAGE_Mannhe_phiMHaA1_NC_008201: Cro repressor; L277_RS115835; phage(gi109289971)     2.14e-43            MTNKKIQKAIELVGTQTKLAEACGVSQPTVLKWLNGGGISAEYLLKIEAATNGQVTIREICEELGNATAK
110068..110754                     PHAGE_Mannhe_phiMHaA1_NC_008201: CI repressor; L277_RS115830; phage(gi109289970)     2.44e-169           MDTLASRLKIVLDQKGLTQEKFAEQIGVSQPSVFKILNGQTRNPTRIYEIANVLDVDVNWLKTGKGEAPDFAKIGKNPTAYEEESSMLRLEVLDVYASAGNGSFVTGDLTAYTHAVEFENAYFAQVFQRANAKGLSIINVDGDSMEPTIGNGDLLFVDTTKSAYQGDGVYVFSYGENLYVKRLQFAGDELLVISDNPLYKEWRITSENEHKFQIHGKVEFMQGHIRRV
110758..111276                     PHAGE_Mannhe_phiMHaA1_NC_008201: hypothetical protein; L277_RS115825; phage(gi109289969)     1.55e-123           MEHQNLTHLVYITSHKQIGVYSISNLNIDDLYFKGYCIQKNRVITLRADRIIKQFDDLALAENYAKNIPQDVFYLFDSLLNQQRKEKITPIYKIGLCFTGFKQARKNELIQLAVDNDLRVVQNVTGAVDFLIFDKESKTVGPAKLAKAEKLGIKIIDDEEFLYMLETGVVPD
111294..111704                     PHAGE_Mannhe_phiMHaA1_NC_008201: hypothetical protein; L277_RS115820; phage(gi109289968)     1.79e-74            MFIPKSSKLKTNNYIEELNIKSIGETDMKKALTLLALSLFALPVQADSLELARNKVKQIFISDEEPKVKDATWTAPFIFKVGVFDDGTKRDGYAEYVCQVLYDHGFKGKGVLVSVIDIKKLVQTGDWVDLGKAKCQ
111804..112064                     PHAGE_Mannhe_phiMHaA1_NC_008201: hypothetical protein; L277_RS115815; phage(gi109289967)     1.10e-56            MKKLVLSILFVISPMALAYSCNDPIPYCKEMQSCEQAKFYLNQCNAGRLDRDNDGIPCENVCGKKGKSEKKDDKKSDKSKSKKTSN
112099..112905                     PHAGE_Mannhe_phiMHaA1_NC_008201: hypothetical bacteriophage protein; L277_RS115810; phage(gi109289966)     0.0                 MNNQSVWHLFCDESGISGKPFYAFGALWIREDKISLFEKEIQKLREKHYCTDEIKWQGTNSKRFSEFYRELVSFFFQADYLFFNCIVVQQAIVNKAFHNGDYEMAKQKHFNLLICNKIEQSLYKNRINRFVLSVDDLPFKYNKADEAMHIIANNIIRKKTAVANAILALNEVDSRKSSGVQLCDLLLGAILSSYQNDITSERKKELTKWIALHLGWDKLTYDTLQEEKKFNIWYFYDPTKGPRIVRTRETKLKYPLLKKKEQTFQPAR
complement(113088..114326)         PHAGE_Mannhe_phiMHaA1_NC_008201: tail protein; L277_RS115805; phage(gi109289965)     0.0                 MDFLTELTNHNHRTPAVSVTVRPKPSKDNEGEKAKDISTLITHRLIQLTLTDNRGFEADQLDLELDDTDGLLALPSRGAILSVGLGWQNSPLTYKGEYTVDELTHDGPPDKVTIRARSADLRGTLTNRHERSFHRTTIGKIVKQIAEENKLKPMVGKEFENEEVKHIDQTNESSINLLQRLAEQFDAIATVKNGNLIFIKAGNATTASGKLLPLFRITRSSGDSHSFSIAEGDNYKAVKAYWHNTQTGKRGEVTWDENSQVKKVTKPTMRKKTKVKRGADGKPIKGKDGKSIKETVFVKGKGRQVNAVVQSKPIESDSEAIKTLPHTYATAQSAINACKRNFEKLQRGVATFSLTLAEGNAELIPELPVQVSGFKAEIDSNEWIISQVTHSLNKGGGFTTALEMELKPKSED
complement(114326..114763)         PHAGE_Mannhe_phiMHaA1_NC_008201: tail protein U; L277_RS115800; phage(gi109289964)     1.96e-103           MLQQFAMMSLGYFVFMRLTIPYQDTSREMNWSHVQNDVVGAMPKSQFTGKAGETMEISAELRPEITGGKMSILALEMMAEQGSAYPLISGSTFMVLGWFVIDRISEQETTFFADGTPRAISFSMSLKRVDDSLLANIIDEVAGFI
complement(114765..115112)         PHAGE_Mannhe_phiMHaA1_NC_008201: hypothetical protein; L277_RS115795; phage(gi109289963)     4.15e-76            MEIKTVTFSKVITAFIFHIITLFVFTQLNEQAQATFMFFWWFFISLRFILVVGIMCVGIEELKIQEYRQTKAYACFSFISNFALCLQFVYFEHLIAAILFLISYIIYHSQTVTIK
115159..115175                     attR                                                                                 N/A                 AAAAACGACCGCTTGTT
complement(115176..115292)         PHAGE_Burkho_phiE12_2_NC_009236: gp30, phage tail protein, P2 GpE family; L277_RS1000000128875; phage(gi134288723)     1.35e-08            MADIATVFHWTPNTFDEMTIVELGQWREKARLRNGVES
complement(115316..115630)         PHAGE_Mannhe_phiMHaA1_NC_008201: tail protein E; L277_RS115790; phage(gi109289962)     4.90e-69            MKKVTLKQGILRGEKRITEIEVRKPLTKQLRGTNLTSLMQLSVDEWCIVLPRITTPKLDKADFATMSAADLLKLSGKALDLMSEDFDEADEEDSEEQGKGEILA
complement(115709..116215)         PHAGE_Mannhe_phiMHaA1_NC_008201: major tail tube protein; L277_RS115785; phage(gi109289961)     1.84e-120           MGLPAKLKNFNFSVDGTSYLGETTEVTQPKLAMQLEDYRAGGMIAPVGVNMGLEKLELEFKIGGHEEDLLKLFGGSISGNAFRFNGAYQHDDDDSVDAVELVCRGRIAEIDEGSSKAGDDTEHSYKASLTYYKKTVNGVDIIEIDTLNQIYIVDGKDRLAEIRKAMGL
complement(116224..117405)         PHAGE_Mannhe_phiMHaA1_NC_008201: major tail sheath protein; L277_RS115780; phage(gi109289960)     0.0                 MSILDTYLHGVEVVEVNAGGVTISTAATSVIGVVCTGDQADAETFPLNTPVLITNPLNYLEKAGSTGTLRRTLNSIGSIVKTPTVIVRVAESDDSDTLTANIVGTQENGKFTGIKALLTAQSTVFVKPKLLCVPQHDNQAVATELLSVAKKLNAFAFISDNGATTKEQAYTYRQNFSQREGMMIFGDWKSYNTDKKAYDTDYAVARACALQAYIDKTVGWHKNISNVELDGVTGITKAVEFDINESSTEANYLNEKGITICLNHNGFRYWGSRTLATDTRWAFQQSVRTAQIIKETIGAGLAWAVDMPLTPLRVKTMLEAINNKLRSWASGDDPRILGARVWVAEEITADIIKSGKFVIKYDYHWIPSLESLGLEQRVNDEYVVDLVNTLKAL
complement(117831..118073)         PHAGE_Mannhe_phiMHaA1_NC_008201: hypothetical protein; L277_RS115775; phage(gi109289959)     2.15e-55            MTKKHYCTGWRSAPANINSCCHQHDRDYGIRGTVTRADADKRLRECMIKNGNPIRAWLFWLVVRAFGWRFYKNKEIKIEK
