gi|00000000|ref|NZ_LMID01000001.1|  Sphingomonas sp. Root720 contig_1, whole genome shotgun sequence. 1318391, gc%: 65.94%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

#### region 1 ####
90255..90887                       PHAGE_Lister_LMTA_34_NC_042048: late promoter transcription; ASE22_RS00405; phage(gi100046)     4.88e-16            SphingomonasspRoot720MSQNRSSAVMQQRHEAHDSLDDFPTPPWATRALLTFLDEQGFDLSGMTCREPAANRGHMVAPLREVFGHVEAADVHDYGVGFPVEDYLFPGADAFPVDWTITNPPFRLAEQFIECACATSLVGVAVIVRAAFLESVGRYEALFSKNPPSFVLQFSERVVMHKGRLAPEGSTATAYAWLVWIEGEDDTRLRWIAPCRKRLERDGDYPEVAA
90887..91120                       winged helix-turn-helix transcriptional regulator; ASE22_RS00410                     N/A                 SphingomonasspRoot720MTGISPHEGFELHILKRLARGPDWSQRFPRLKPVIDRLQDQGHVERYPAPGAKVPLMIRITASGEGRLAALRRKAAA
91117..91986                       hypothetical protein; ASE22_RS00415                                                  N/A                 SphingomonasspRoot720MIGGSVQLRSYRRARRDGLATEEAATLAGISIGEARLHDQDDAKNPPPPEAYEPIPAPAGTAGTITEEPEMARPKKQSGTVNGEVPKPDPALAVKIYREDIKPAQARVGEYAQEQSTAYKAIKKQAHIQPQAAKLAFKLDGMEESKRDDYLRCLRGLLTELKIFMPSDLVDAAEGKSTGGDVIPTGERPRPKLATVGGTAHPIDDSDLAGGDEPKASADEDEAWVVFDPEAQLYIDQTGKDWSAFADCGRFTKARAQEIIDSFGDDADGLQIVDSAGPLPGPLVSEAAE
91990..92547                       hypothetical protein; ASE22_RS00420                                                  N/A                 SphingomonasspRoot720MRTIFLDLSKRSAGYACWGPGDPRCVSGAWILGSEFTSDGLVYCKLHENLSDLHALGRIEAIFWEEPLDARVLSGHTNIDSLRVLNGLAAHAASWGEAMGCRIVKAVNMTVWRRFFIGAMPRATKSADLKLMSMQRCRQLGFKPATHDEAEAIGGLSYACDQLNLSPPWRDAHLFGGRTVREGRL
92544..92726                       hypothetical protein; ASE22_RS00425                                                  N/A                 SphingomonasspRoot720MSRVALFPSTDPDRLWERYAVLARAIMSDQTKLIDRDHMQAMARAHDEWRAAFLASERRA
92687..94177                       PHAGE_Pseudo_JBD44_NC_030929: hypothetical protein; ASE22_RS00430; phage(gi100003)     8.95e-45            SphingomonasspRoot720MARRLPGQREARMRNLQAVPSNDGEPYPETLYSYDTEAALLGAVMLEARMADMIGEMVAPADFYYPLHGRIFAAVLNEVANGRQPSPILLRNQFVDDPEIAGYGGPGYLTNLTGSGAAIVGAKDFARCIADLAKRRRLIDQMRLLSDDVMTQVDKPVEELIDGLDGAMADALQKNESATAASIAEAWDATMREIEDEAAGRAPRGIEIQRLPDWNDVVGPMRGGEVTILAGRPSMGKTAVSLAVTLGAGQASAGALFISLEMEKKELMKRAITDLIYKHGESASFDHVQKGKFNAFDRQRIADARAAIDNWPVQFYDPSTLRIGRLAMTIRRYQRRMAGKGQQLKVVVIDYLGLIQPDNPKASRYEQVSVISRTVKQIAKECGVHIVMLAQLNRQVEQREDKRPMLSDLRDAGDIEQDADNVIFLYREQYYLERAEPDPSDMKKHPAWETSMDAARDRVELISAKRRNGSIGRRTCWYFAAHQAVRGSRFYQDMNV
94174..95154                       PHAGE_Pseudo_phi297_NC_016762: putative DNA replication protein O; ASE22_RS25940; phage(gi374531278)     1.92e-42            SphingomonasspRoot720MTDLPAPLTPPDCDLRGLKFMPLDVQMVRDSSLTAKAPTEAFRAAVILWCAAWQQVPAASLPDDDEELAHLCGYGFAQKEWKKIRTWALHKFVKCSDGRLYHPVIAEKAIEAGGRRGEWNEKNDTRAERQKRWRARQKELSELLRERGVTPPKGASLETLERLLGDAHVDSDVDAKPSTCPSTVDTGEMRKTGTGTGTIPPTPVKAPSTPPITDRLHRVMEEGRFTSPPNDGKLIDEWLAAGADFDRDVIPIVRTVSQRMIDAGRGPFKLKAFDAAIREKLANDDAEVQRLNRTAERLRRDAAAQAAADAAQAADEARWAQQAGGR
95162..95620                       hypothetical protein; ASE22_RS00440                                                  N/A                 SphingomonasspRoot720MGKHLPFNRSPVRPHQVRVCPIDFADVFIRGGWAAVRAEFGLHWQTERRCVEEAGGEMLKRKRRAYLAQVRKLRKSVQPRHEKVEPIQETSAAVRAAIEFMRGPKGGAWLITATGTGDFFFGATRLTGAEIVEKAKRKGFTHGVAAHLIAAE
95623..95853                       PHAGE_Rhodov_vB_RhkS_P1_NC_031059: DNA helicase; ASE22_RS00445; phage(gi100021)      7.87e-06            SphingomonasspRoot720MATNPIHVTDHAIVRYMERVYGIDIERIRAELSSPTAALADRIGAPFVILSSGHRAAVRDGCVVTVLSKRERRRLL
95805..96335                       PHAGE_Bacill_Phrodo_NC_031100: baseplate hub assembly protein; ASE22_RS25945; phage(gi100106)     7.30e-10            SphingomonasspRoot720MRRHRSVEAGTEAVVVRPISLDIHINQVMCRKYNAMRMICRHVGMLPITPEKAAAHRAKLSDLQVLWAIQVILSGAPPWKRSAAILILDLISVDWRETVGEEILGFVVDRDDPSVRRWRASVLSRDEYQCRNCGKADDLQAHHIIRWVDDPAQRLNVDNGITLCRPCHMEEHRHYG
96382..96711                       PHAGE_Achrom_JWX_NC_028768: hypothetical protein; ASE22_RS00450; phage(gi971741682)     5.79e-09            SphingomonasspRoot720MLEETCNVSEAARQAGIGRRTAYDWRGADPKFAARWEDAEEIAADNLEQVARQRAIAGSDRLMEILLKAHRPEKFVERLRADLTSSDGSMTPPSLADFYRGAPAKADGD
96701..98137                       PHAGE_Acinet_IME_AB2_NC_041857: hypothetical protein; ASE22_RS00455; phage(gi100027)     0.0                 SphingomonasspRoot720MATEAIAGIGHNGGPTLNPILQDFWLTPVNDNQEPVRNRVLYGGRASSKSWDAAGFAVFLACNVKIKVLCARQFQNKIEESVYSLLVTQIERFGLRRQFRILDNKIIHKRTGSEFIFYGLWRHISEIKSLEGIDICWLEEAHALTEEQWKVLEPTIRKQGSQFWIIFNPILSTDFAWRRFVLNPPPGTLARQINYLENPFLSDTMLRVIEAAWEEDEAEYQHIYLGIPRDDDDSVVIKRSWVMAAIDAHIGLGIDPSGSRRVGFDVADSGADKNALVAATGSLATWTDMWKAGEDELLKSATRARDAAVQREAELVYDSIGVGAGVGAKVNELNEDGIHIRHIGFNAGGAVANPDAIYARSHPAKTNKDMFANAKAQAWWNIADRFRNTFNAVERGVEFDPADLIFISSEIDNLALLIDELCTPKRDFDNAGKVKVESKKDLARANRKGGAKPSPNLADAFVMAMGTVSRKLTAFDVL
98185..100137                      PHAGE_Rhizob_RHEph04_NC_041908: hypothetical protein; ASE22_RS00460; phage(gi100010)     1.02e-123           SphingomonasspRoot720MSGRIANVRPKPGFMFDGQSIVPAPPNVIPLRDGLGNVLTGRGTSIDRTVRNFWYRRFQDVQQVSFAYLGSWLHRKIVDIPAEDMTRAGRDWDATDDEIAKIEAEEKRLGYWEKLFEALLLGRLGGGAILIGLGDNPANPLPVTIRPGQIRYLTVLSRWELNLGEEDRDPESDTFKQPKFYRLPGTSRQVDIHPSRVVCFRGLPIPAFPGMTWEDRFWGMSVVEAVDEAVQQATTACAGFAALIDEAKIDVFRLAGMAEQLLQPGGEDRLLQRVEMTNTGKSVHRAVVLDKEDEWEQRQLALTGVRDVIVTYDARVAGAADIPATRLFGKSPDGMNATGDSDLTNYFQSVGSKQEKQLRPMMERIDAVMLPSAGLKADLTWSFSPLMVLSEKDQAEVENKEADTVTKYANAGLVPESALAKAVQNRMIESQRWPGLQDAIDEADAAGEGLSGEVDPAELGVVPVPGANPNAPGANPPARARRAANDAAMFFADAKPRPLYVQRKLLNAADLIAWAKSAGFTSTLPAGDMHVTVLYSRTAVDPMKMGESWAGDDKGQITVKPGGPRAVERLGESAVVLLFSSYEIESRHRDMVAAGGSHDFEDFHPHVTLSYEVPAGLDLDTVKPFTGRLLFGPELFEPLDLEWKRKITEA
100140..100976                     PHAGE_Rhizob_RHEph04_NC_041908: hypothetical protein; ASE22_RS00465; phage(gi100011)     1.63e-20            SphingomonasspRoot720MAFNLPLIARGQGLRRAVTLRPIVPTQAMATDLAAVYAPAWQVWRDHSAAIMAAYDPTPLAMDGAPLTMDATIHDSPDQAASEIESTARDFLSRLIVEITPALRRWAVRAEQIHREKWAAAIEAGTGVDLSTVLLAGETRETVEAFVARNVALVRNVSDQAQSRISDAVFRGYQNRTPAREVAKEVREATGMGRARAVRIAGDQNAKLSAALDLQRQAEAGLDQYRWRHSHKAHPRAVHKARDGKLFKLGEPAGDTPGQAPFCGCRAQAWIPLLDEID
101027..102178                     PHAGE_Rhizob_RHEph04_NC_041908: hypothetical protein; ASE22_RS00470; phage(gi100016)     1.62e-44            SphingomonasspRoot720MLFTDRLTLDAPKKVQGGFLAVRAKAARTGVYQYTGREVDPDNKHGLRDTAVVNVLRDEATVFDTAAVQSFIGKPVTDDHPHESVTSSNWRDHARGTIMGAMRDGEYLAFDLLLMDQSTIDKVNAGKRELSNGYVADIEFGDFKAADGTACQARQSRITDGNHVALVKYGRAGGDCAIKDGFALCDALPSHFLDGLTKEKLVKTMLIDGLTVDISNADTAEKTITTILAARDAANVKVTDLETKVATLTTEGATKDAQIQTLEQQAKDAKPTAAQLRDAAKAYALVCDKAKALGVQFAEDADADAIMKAVVDAKMGDAAKDWSADQVAASFAVLSKDAAPADPLREVFRDGIRQPANGAKAVDSQRRRWLADKANAHRIQPRA
102191..102643                     PHAGE_Rhizob_RHEph04_NC_041908: hypothetical protein; ASE22_RS00475; phage(gi100017)     1.22e-07            SphingomonasspRoot720MAVLQNSFSEDIPYGYAGMEADGELSNIITRTLEGDTACAFGRPVYRGTADKGVTLTVSAALMGFAIARKGLPVTSGRAADTFAPGDNVPIKERGKIWVTSAATTTDGAQVYVTSAGAVTSSSGGNTAATGWFFEDTLASAPGLVRIVRR
102659..103711                     PHAGE_Rhizob_RHEph04_NC_041908: exonuclease A; ASE22_RS00480; phage(gi100018)        1.85e-44            SphingomonasspRoot720MTKHITRDQMAILEDGSVAVFFDSVVAAVAHLEANDHGMAWLDAVRGVDFGDAQQTMAFLAPQLLRVEQGVYMVKYPTADYADFMPVDTAGSVWTAGSLFYSGDIAGKPEWFDVAADDMPYADVSRTQFLQENHIAGIGYKWNRGDLERGQQLGINVIADKADAATKTAERFIHKTGMTGDGLKFATGFINDPLMTTTTGLMITASSDPDDDVAVINDALTSVETNTLETYRADTLALPTSIWNILASKRVTDTGVSVLRYLADNSVLGPVTLKRTRHLETAGAGGSKRIIAYANTMEVHRFHLPGGGHQFFPAWQKGPFSWEVPGIMAIGGYEIRIPKAKTAVDLTDAS
103763..104080                     hypothetical protein; ASE22_RS00485                                                  N/A                 SphingomonasspRoot720MIRLIDRSYVLVDAGKTAQAQRSKVASIPAGVMEVDDEGNVVDLPEAPKDLPQLDHDKDGEPGGSTSPSASDELKAVRAEYKAKMGKNFFPAWDVAELRRRMGDA
104077..104616                     PHAGE_Bacill_BCP8_2_NC_027355: putative methyltransferase; ASE22_RS00490; phage(gi849253085)     1.84e-05            SphingomonasspRoot720MRRLEIGPGRQRLPGYETLNLIRTPSTDHIGDCRRPPFPDATFDEVYSSHCIEHVEWFEVEATIVEWARILRPGGILEIHTVDGERMMRAMLGEIEVHPGEWKRDLHLGDPYKWAAGRLLNYAKRGEAGSSWMHRAILTPAYLRGCLDAAGIVDIESVEEPKGEKRHRGINMGLRGRRA

#### region 2 ####
complement(934395..934649)         PHAGE_Burkho_KL1_NC_018278: hypothetical protein; ASE22_RS26025; phage(gi399528712)     1.52e-17            SphingomonasspRoot720MIPARIEGCTRTLGAPADWTPETSGPCRGLPIRDEMHGSVPVMVSCWEPTPAEIAAIAAGGKVILCIVGVGHPVVSLAATVEQA
complement(934646..934990)         PHAGE_Pseudo_nickie_NC_042091: hypothetical protein; ASE22_RS04245; phage(gi100096)     4.43e-07            SphingomonasspRoot720MTVEAWREIDAEAHKDMVWLLVDYSDRDAAGHPLADATYAATIGFWDENEEEWKFAGWCWSHDHFTEGRGRVVAYKPIGFMLEHTGEWPLPEGGNLPADCVTPALSADGLGTQA
complement(935085..935453)         hypothetical protein; ASE22_RS04250                                                  N/A                 SphingomonasspRoot720MSVGPDVPSSSDLYLRARATEMVEIEQIDREEFGRALILQGYSAIRAAEMARELPDNDGALQMLARHRRTALPSDVVRLVIAARIYLFEDESQEARRELDQASGAFASRVPWDNDPTQEAAA
complement(935450..935683)         hypothetical protein; ASE22_RS04255                                                  N/A                 SphingomonasspRoot720MSAADKRAIDAAVASFVETYPGDVPMVDLRCYVREKTGLDISGPVLAHPLKRLGYRRDGERKIDTCPGKTVFYTRRP
complement(935683..936153)         hypothetical protein; ASE22_RS04260                                                  N/A                 SphingomonasspRoot720MKLALADIPAADKQPWVVAFGDDPHSWNVDEGEGSGLPGEAVLRHALQTFCDCWSDFDAETAARIFNLPIGLIQTIEPLRFFGSTSEHVTIDDLGSLIQALSATRTEWGTITVADVARLINQPVARVIEAVGLHSWMFLVGAHDRPDRLLIEHEGE
complement(936156..936407)         PHAGE_Mycoba_MOOREtheMARYer_NC_028791: hypothetical protein; ASE22_RS04265; phage(gi971743718)     2.03e-10            SphingomonasspRoot720MSDPIQARYRAGMNAVAEMLDQQFNGTTRPKKIAFVLLISEFGAIEDGRVNYISNADRADTITMMKEWIARAEGRYSEKGGKA
complement(936404..936691)         hypothetical protein; ASE22_RS04270                                                  N/A                 SphingomonasspRoot720MTEGEALYQIYKPPLRIKIARMFGFRPARYPFDDAFDFEGKDAIYILMDVRFSFADRIRVLVSGKVSVASITRTSFIVGETQTRSNCTIPLWPER
complement(936688..937509)         hypothetical protein; ASE22_RS04275                                                  N/A                 SphingomonasspRoot720MAKPPAIDFEFFSPASLRTLDHAEQVRAVRREVDRRRRANAARIEKGDLRTDHAATDEARWDEILADMTEGQGGIRPARRYQFTWADKLNALRGEIMRRRRSFPKLLEQGRINAADADEGIAMMECAHRWYWVEGMAFGAEFIDPGDAAATMNRLREEEARRHAWEHSAGVDVPELLAVMVDGVPVAHLAPGPFTAQFDRDPADRGRWLPSNVLNAAGDPMFGHDRRIVPMIEAMEPEQRARTILAIAAAFNRQWHERTHPIEIDDEAQQEAA
complement(937509..937775)         PHAGE_Sulfit_EE36phi1_NC_012696: hypothetical protein; ASE22_RS04280; phage(gi237651481)     2.98e-09            SphingomonasspRoot720MIIVSVQLLSARDGSTQELARAYISNEGGDATLGDYGVEILRGRSSEDFARRTVLKRGKVLRHPRQREHVWNLVAKALSGLGYGIGRK
complement(937772..938134)         thermonuclease family protein; ASE22_RS04285                                         N/A                 SphingomonasspRoot720MILGLFICTAAVAIDGDTIRCHEPIGRVRLAAIDAPEMPGHCRRGRNCAPGDPVIARDVLTYLLGQLDGKTVECEQVDADPRRKGFQDTDRWGRPVARCIVDGKDLSDTLLGFGLVRPWP
complement(938131..938622)         PHAGE_Rhizob_RHEph10_NC_034248: hypothetical protein; ASE22_RS04290; phage(gi100056)     5.19e-10            SphingomonasspRoot720MKAFTIWQPWASLIIAEAKPYEFRGWRAPRSLIGQRIVIHAGARRIAKIEVDELLMPLLMRDRFPVSAAETCLFPDKAIPVLYAARTGRLPIAAGIGTAIVGEPRNGHDIAAEFGVPRANDSSRDEQANWGWPMLEVEAWPEPIPMKGAQGLWNCPTPERAFL
complement(938619..938834)         hypothetical protein; ASE22_RS04295                                                  N/A                 SphingomonasspRoot720MIRTLSRAERDHLVRIRRQPQEAGWRNPQLNRLRRDGLVDCTPLTRPSGAISKYREWSITDAGREALEKLP
complement(938831..939508)         PHAGE_Paraco_Shpa_NC_041868: hypothetical protein; ASE22_RS04300; phage(gi100030)     5.11e-63            SphingomonasspRoot720MHLDLFRSPQVLVACERSGIVRDAFLRRGFDAWSCDVEADERRSNRHIQCDVRDVLGDGWDLLIVAHPPCTRLCKSGLRWLHTAPPGRTLPEMWEDLDRAASLFSTLWQAPVPYVAIENPMMHRHAQVRITNYCPPAQVAQPWWFGDPVFKGIGLWLRKLRPLRPTRQLQPPARGTDQWKRWSRIHRMPGNHNRQRERSRFFPGIAAAMAEQWGDQILSARRKGA
complement(939511..939774)         PHAGE_Agroba_7_7_1_NC_019519: hypothetical protein; ASE22_RS04305; phage(gi435844355)     8.81e-26            SphingomonasspRoot720MSDIGHNSSISSAAAQELRLFVERLERLEEEIKGINDDKKDVYSELKGRGYDAKIVKKLLAIRRRKKGEHEEEMMVLETYMTALGMI
complement(939774..939965)         hypothetical protein; ASE22_RS04310                                                  N/A                 SphingomonasspRoot720MDRGRAIDNDRHRMQHQSKAVARILRTIGFADQRHRHELTSACAEILAANGPIWPGLDDDVPF
complement(940061..940519)         PHAGE_Rhodob_RcapNL_NC_020489: hypothetical protein; ASE22_RS04315; phage(gi461475013)     5.20e-13            SphingomonasspRoot720MSNAGDAVTTAILRAWRDGQPPASATVKAICDFPFNNRALADVLAERLDQIFGHGYDAVHDNCHPATDLPLAALTYLEDALTKIQGAPGYTQPVLGVAAEAPAPWPWRDFFRPADARTNMVKACALLLGAIDRLDAGDGAAVEERAAAYGAR
complement(940736..941113)         hypothetical protein; ASE22_RS04320                                                  N/A                 SphingomonasspRoot720MIRALAIAAAIAACAAPASARSLGDRIRDMPDEEWVYQGSRAVELGLTAYCAANGKCEEVGVPKLVCGARPSAACLAGFGVVTGFLSAAITSAIQDRDPAAARTVARVKMFVGAGVVGWNLSVVW
complement(941110..941412)         hypothetical protein; ASE22_RS04325                                                  N/A                 SphingomonasspRoot720MIRAGETTHVGAPGPSSLTIQLGDRQVRARHAHESGINSFEADCAGCGEHHAIVTICFSLDSIAPPTRAIYLSLTPDQARDYAASLLAVANEMDGGGVRQ
complement(941409..941735)         hypothetical protein; ASE22_RS04330                                                  N/A                 SphingomonasspRoot720MSRPVCFDIDEADNAYVDQVIERYAAVYLKIFGSELPHDGRLSHRMDLVATHANGNPMDFAKLLAADDFTFAHDIGGIDRHIDRRTGKLLGHFLPRCSKREPASGVAA
complement(941732..942097)         hypothetical protein; ASE22_RS04335                                                  N/A                 SphingomonasspRoot720MSVHQLLEARRADQGVGLVYIARRAKLPAELTTGAIVKRIRKWVAKAKFPPPVTPRIYRGELLDGADAVWVHARWDKAHVDAWFDNRTPPELRVVDDGYLRSHVAGLLDSRAEAMFAGGAR
complement(942514..942855)         PHAGE_Brevib_Jimmer2_NC_041976: thymidylate synthetase; ASE22_RS26030; phage(gi100061)     8.31e-08            SphingomonasspRoot720MFPDNRIREFRKRARLSQAELGKRVGLHQTQIGNLENGTRELTFEWARRIADALGCLLADLLTDKDNPDRLSEEERELVRNFRAANDSQKALVTRVAEPLPIAAEEDGRKTAA
942938..943186                     PHAGE_Bacill_vB_BhaS_171_NC_030904: hypothetical protein; ASE22_RS04345; phage(gi100037)     5.00e-06            SphingomonasspRoot720MPSPSLERLMSKLKTWRENRGLTQQELADQAGYHVQYISAIERGARQAGMGFAKRMRELSEGEITLDDLAPPTQYTAPQKAA
