gi|00000000|ref|NZ_LN482618.1|  Rhodococcus ruber, whole genome shotgun sequence. 559241, gc%: 70.20%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
110991..111002                     attL                                                                                 N/A                 GTCGAGGCGGCG
122249..123055                     PHAGE_Synech_S_CAM7_NC_031927: hypothetical protein; RHRU231_RS25615; phage(gi100160)     8.51e-30            RhodococcusruberMARDTDPGSRDRASADVVHRGPVQLRRDRAAETTTMDQRLLDRRGPSDWVHTDPWRVLRIQSEFVEGFGALAEVPRAVAVFGSARTPVDHPEYVTGRALGAALAAAGYAVVTGGGPGAMEAANRGASESGGFSIGLGIELPFEQALNEWVDLGLNFRYFFARKTMFVKYSQAFVCLPGGFGTLDELFEALTLVQTRKITRFPIVLLGTHYWAGLVEWIRQSMIGEGRISPGDLDLLYLTDSVEEAVQIVVDAHRGQDESALYGEGGSW
123049..123636                     PHAGE_Synech_S_CAM7_NC_031927: hypothetical protein; RHRU231_RS25620; phage(gi100160)     3.48e-06            RhodococcusruberMVSGFDPVEGVGGERAVEARAVCVYCASGPVGDSYLELAAAVGTAIGRRGWQLVSGGGNVSMMGALAEATRAAGGHTVGVIPKALVHREVADVDADELIVTDTMRQRKQVMEERADAFVALPGGIGTLEELFETWTAGYLGMHTKPVVLLDPVGHYRGLLDWLESMVPTGFVNRRALDDLQLTEDVEDALDRCAG
complement(123664..123996)         PHAGE_Gordon_CaptainKirk2_NC_031072: sliding clamp DNA polymerase; RHRU231_RS25625; phage(gi100042)     3.80e-15            RhodococcusruberMSIYALGMTTHSRYDIDVPTWTMGDRLRKIRREIKMGQEEFAEALGVKPSTYMAWESGRNAVPSEVAIARRVRVLCGVPEWWTLGIDPLEQQTPRDLGGRHGGTRGITAE
124083..124277                     PHAGE_Gordon_UmaThurman_NC_031249: hypothetical protein; RHRU231_RS25630; phage(gi100037)     7.04e-15            RhodococcusruberMADTKSYQGDELLTPGEAIRVAAISRSTLLRAERAGRITALRTPGGHRRYRKSDLLALLNPSAA
124345..125241                     PHAGE_Gordon_GAL1_NC_031936: membrane-associated initiation of head vertex; RHRU231_RS25635; phage(gi100034)     1.59e-34            RhodococcusruberMSDLTVPEARDKRNSLASRTDVLDKVGVLATLPGDMHTTTEMVASFYGVDVELVRYHVKANREELDTDGYRVLTRSVFESEFGSLSNLDPRARTIALFPRRAVLRVGMLLRDSSVARRVRDYLLDSEQRIQSMNVEPLTGLEYALRLVDAEKRVLEAQARAEMGEKFKRAIEGGDGLTLREFHKKYFSAITETAFMEHLYSKGYLINQIGKGAVRTEGPKAGTRRDGTQHRHPTYKGKRFFYLHGGGIHGGKRREGTRVRPGHWELELRDQLAAEGLAANENTAGLFVIEGGNSKGLA
125238..125528                     PHAGE_Gordon_GAL1_NC_031936: clamp-loader subunit; RHRU231_RS25640; phage(gi100040)     8.96e-08            RhodococcusruberMTDSRFPALDFDRTTDEFYGNGYEVLRHNVIEPEVPETGEFIAIPVRTIVDGNNGPGFEIGPYSLTETDVVVLHNALISHIRMFPDLFRPAKKDAS
125525..125776                     hypothetical protein; RHRU231_RS25645                                                N/A                 RhodococcusruberMTIENFESISLYAIPFPAVDTGSIIIAAAAGETDYPESDVVSLTIVSGPVHFQIHLSPDDARALADDLNAAAAVDGAEEGGAA
125773..126048                     hypothetical protein; RHRU231_RS25650                                                N/A                 RhodococcusruberMTILYAAREVVTWEKVADHAPSGHLWLLNLTDGTTVPAFGHQLDIPGATRRPGGQPTGWSCRGLVLALAVSLAAWVPIVWGTVWIVRTVIA
126045..126263                     hypothetical protein; RHRU231_RS25655                                                N/A                 RhodococcusruberMTAPTIVDPYVYLCPRCRLTVAGRVWEDVLAQGRAHDALHTHYAPGFRGVPIDPATLAELPEHAPAMDGGVA
complement(126584..126808)         hypothetical protein; RHRU231_RS25660                                                N/A                 RhodococcusruberMSSSKHFGYDRLRISEKAARTKNLQRALTEAAARGDSMDLVDRSALLGMITIVGELEFAIREITEHVFPGRAGG
127129..127467                     hypothetical protein; RHRU231_RS25665                                                N/A                 RhodococcusruberMSIRDRVSKVLADELTFGKHGFETGTSMAEYLYDRLESEGFAVVALPEPEIDKFDNPDFSNEHIRLTVYRDGCVQLETPEYFGVNAGIHPFQLRDLAQRCLAAAKVAEARQL
127464..127739                     PHAGE_Rhodoc_REQ2_NC_016652: hypothetical protein; RHRU231_RS25670; phage(gi372449875)     3.05e-09            RhodococcusruberMSAVRRIGVWQILDAAQLAQLGPTGRLALTLVVEPPPEGFGPWQQCDYREWKAAKADGLPTTELEQSYDDQFRAVYWVAHRATNRTEGSAS
127909..128286                     hypothetical protein; RHRU231_RS25675                                                N/A                 RhodococcusruberMVMISDSRHRLDQIDAAEARVIGDVAANLAYSLTDRAAQPDASHRGELLVQANAAVNLAISWRTYAAMWEADNFVEPPTPPETRAVKANGAYEVSLPAHVASLAECLGGQPVDIAYRPRPTGGAS
128444..128734                     hypothetical protein; RHRU231_RS25680                                                N/A                 RhodococcusruberMTTVNTGPALTGDEAEALVQRLPAGSAVVHLPPLAAPRRLPAEQTVIAWTAEDGSACITVDPDGRLAVHASVLTCAQANDVAAALIAVAARVVAAD
128734..129051                     PHAGE_Gordon_Hedwig_NC_031099: RNA polymerase sigma factor; RHRU231_RS25685; phage(gi100049)     1.67e-09            RhodococcusruberMVARCRDCRQEITWATSTGSGKRIRLDRYPDPGAGRVRKRDIRDEDGVVYADILRGDDLHRAIADQQPLYVLHSDTCHARRPPNPRPPHIRIDLPRRAKRQWRYR
129215..129952                     PHAGE_Gordon_Bowser_NC_030930: hypothetical protein; RHRU231_RS25690; phage(gi100053)     1.14e-35            RhodococcusruberMTAVVVGTRDLRAALTSVRAHAATHPDLERLRRIRLEIDTHHVTVTATDTFSAGLAIVSIWEDEDRQDVTVDLTPEQVDKILKIFPTPKDKGDQPSAILRLEVGDNYFELTDVSGLPGIDGQSLRQPRLATDESYPDIPHLISRTRSGELKWLEQFAVNGDRLAAFRIAGVVYSEPVVIEARTGTRALAITVGESFLGVLMPVALDEDAQVRLKEWNEGWEARLPHPDSLPRNAERISAEGGDAP
129949..130266                     hypothetical protein; RHRU231_RS25695                                                N/A                 RhodococcusruberMTTRTYLVTGPAADALEHALTADGARIVDTPAPAADAHAELTAEWQRSDTPPAGLLEQLAEMADTWEENMPITSHFDQGHAQALRGCAWELRQLLETYAQEGTRP
130263..130538                     PHAGE_Gordon_CarolAnn_NC_031118: recombination endonuclease subunit; RHRU231_RS25700; phage(gi100054)     6.07e-12            RhodococcusruberMTTTEHHLPGATRCASCRAVIVWATTTKDKPIPLEPASTPHGNLAVYPLDGGGLRAVVVLGPRRDAMRACGQPLYLSHFVSCPNADEWRTR
130648..130947                     hypothetical protein; RHRU231_RS25705                                                N/A                 RhodococcusruberMNVNDLSFSVYPVGLFDDLRRLVIMVRAGRWGTARYRVKRIARSLRLAIKYRELGYFNGFLAEPINYDPRSLRWTRVGHGWTWRRALADLHRHLEEMNP
130944..131273                     hypothetical protein; RHRU231_RS25710                                                N/A                 RhodococcusruberMSLAHDNARAAAGGYPGAGADQNDTQRLADAQAEIAKLRERNRELVGRNDVLVQQVRDWADENGRLARRLDTALRTDAARRRVLDMWCTDPLRPYLPSIHLITALETAL
131270..131572                     PHAGE_Gordon_Yeezy_NC_031269: hypothetical protein; RHRU231_RS25715; phage(gi100058)     2.73e-09            RhodococcusruberMRTRTIHRVNFEITDTVTVDLPTGARLLHVAPCRQHPDRRIDLWYECRVGVPARPHTLHVEGTGHPIVDDALYVGTVVASNGLVWHVYLDARLAQEVVLP
131569..131907                     PHAGE_Mycoba_Optimus_NC_041844: hypothetical protein; RHRU231_RS25720; phage(gi100077)     4.01e-13            RhodococcusruberMTVTAQILDQVVEVRRVHDGQFTNIEPEFDGSWPKLTKLEWQCAVVELDCGIRPRVSPALVHVNGVLQPDHFCVAVGGSSISPLSFLDAWTYLNGVAAGVMAARAGGKGLER
131904..132158                     hypothetical protein; RHRU231_RS25725                                                N/A                 RhodococcusruberMTGREGDRIEVDRIAMHAADAAYMMVDPHPKGYILTTASRVRRALYAYEWAKTNKRPGTRDGYFYLPDPGEVRAAVLEYEAADE
132226..132714                     PHAGE_Strept_Hydra_NC_042052: DNA topoisomerase medium subunit; RHRU231_RS25730; phage(gi100004)     1.80e-30            RhodococcusruberMHYLRKYQRTRRHPNPPVGVHIRSLRLFWQKVDTSGDCWIWTGPLNERGYGRTEFRGKKHQAHRVAYETAFGVSIPAGHEIDHLCRNRTCVNPWHLEPVTHRENVIRSTSLKTHCVNGHPLSGSNLMHNSVSGNRCCRTCQLAASRRYKARKRAEETSHAHS
132701..132892                     PHAGE_Mycoba_PLot_NC_008200: gp41; RHRU231_RS25735; phage(gi109522608)               4.04e-07            RhodococcusruberMHTVELYRDKTGEYRWRRFAANGRVISDSAEGYTTKGAALDGLYLANRDSDHYQFVDDTEERL
132901..133200                     PHAGE_Rhodoc_REQ2_NC_016652: hypothetical protein; RHRU231_RS25740; phage(gi372449877)     1.21e-24            RhodococcusruberMQITVYSKPDCQQCTATARVLTKAAVLFEYIDVTKDPVAYARVQELGYTGVPVVEAGDMHWQGFRPDKLRRLAELHSSAANVSELDALAAEYLSEGGAA
133197..133925                     hypothetical protein; RHRU231_RS25745                                                N/A                 RhodococcusruberMTDTEITPELLRTVGNWLVQQPGSTDMAHVEIAEQADRLEREQEQQVADLLAPSRPIAEVSDGALLAYVRSLAEVAADHFEGSIARDLDDWAVRIERRVERNRAESTRIDRLAKAFHDAMSGQVDSGRSTWDLLTSEHREACRSGVGAVLDYLAEERSAAADSETCGKPETQQVTPRAREPRMWGDLCAVPPNVLTVVDKDGDRYLRDPWAKNGWTIERSCAPIDEYMSFEHAPFTEVIADA
133918..134145                     hypothetical protein; RHRU231_RS25750                                                N/A                 RhodococcusruberMPEPIRPKVSASDVQSAGELVLLIAAYATECVGPKGTVIRVPEDDAQLIRATFIGKLAEAATKIANGEPLSREQP
134142..134402                     hypothetical protein; RHRU231_RS25755                                                N/A                 RhodococcusruberMSHQHHGKKPYLTAAHAIVDARMLSIQSGEDCIAYPCEYCEHWHVGHFQHLRTQIGTVHPGLRERLADRIAGHATAGKEFAGAGTT
134444..135736                     PHAGE_Gordon_Hedwig_NC_031099: aerobic ribonucleotide reductase B subunit; RHRU231_RS25760; phage(gi100063)     4.19e-98            RhodococcusruberMFFQVTDQLTQNRKHRSLAEQALEGHLEGIAAIGLWTMAGADCQSAESGGTDGVVRRTDLIRILLNPQIAEHLAGVLVDVGLWHAPGHACPRCPAVEPGTYLFHDWFDMGYDPAAKVEVTRRKRKELKDQEIINSVWARDCVDPVKPTEANCRYCGVLVKRKDTRSETGRRPQLDHVDPTRADGARNIVISCTDCNRRKGNRTPAQADMVLLPPPPRDNVSPHPAAEFVSPHRSDAEHVSPTPVAAETSSPDHRDAEMLSPGHRAAENTSATSGDATTRRPRPDHTPDHPKRSVPVRATRAGAGLAGSGQGMGLVPGKGHQDRSPAAAPPDERSPRKRRRRGKGRRPTAVDPPASRQLNTQPPTPDPQPEPPLWDAGAAPHVPAPGRFGSPWAGWTGPPSTVGDETTCPEHHLPEPCWKCAPPEGHPHDH
135726..136136                     hypothetical protein; RHRU231_RS25765                                                N/A                 RhodococcusruberMTTDRPHPLPDAVLADLDDRAVQLVAVTHGEGDAGDVARLTAALDRQQLIGLAISCAAMVDPSKPVSELLAWMTPQDPVCESTAADGVARAWTEPELRRAHAAHVRGVRTPYVVTGERLYQRLSKRARAARSGVPA
136157..136855                     PHAGE_Gordon_Nyceirae_NC_031004: hypothetical protein; RHRU231_RS25770; phage(gi100055)     2.45e-49            RhodococcusruberMTRDVEYLEQAWPSLIALRIPGTARSWVENPRRAGTLSPEDQERLGKRGLQTPAPADIQVLDLIYSIATRAAEIAECLIDVVGPGAGHELPDVAASKDPMRWLATVRELVPAAHECDDKTAPWVAYLINPLVRQTARLLGDIRDGQVLNGICPWCSGRLSGDLIGQRTMQIHYPDPDEDDDEPLIICRGINCSPPRAMCGMRWRGHPAWTRREWDWLAKMLRDPDREIEKAG
136861..137082                     hypothetical protein; RHRU231_RS25775                                                N/A                 RhodococcusruberMSELPNLYGPEGFSAILSHHGVPMKFKSVRTSWEEDVELHVLRFACDCGLTAEVHTRELDGGPEMVRRRQGGQ
137373..137693                     PHAGE_Rhodoc_REQ2_NC_016652: hypothetical protein; RHRU231_RS25780; phage(gi372449903)     1.29e-48            RhodococcusruberMSAPRKRAASTTARGLGWSHQQQRARLLQRHVDGSPCWWCGRPMFRDRTVNFDYDPASEDQTSGTLAADHSHARATGGTKADRLLHGLCNKQRGDGSRDHLRPAVTG
138114..138401                     PHAGE_Gordon_Attis_NC_041883: protector from prophage-induced early lysis; RHRU231_RS25785; phage(gi100001)     2.83e-14            RhodococcusruberMFDPLDPYDLTAMVIEASRIKDQLDQYHRMLTGNSEVWFRVVPARGDSQVLEVKATGVAQEARQLTNVWRQLLAEIRRRKGATSGSGSDDDLDDL
138379..139917                     PHAGE_Gordon_Yeezy_NC_031269: hypothetical protein; RHRU231_RS25790; phage(gi100002)     1.87e-177           RhodococcusruberMTISTISDEFPTLAGRQEPHHVSVFPGDDEHGRKAVELGRRVGRPSMPWQKMALHAILTTNPDGLWTHTICCLLCPRQNGKSLILVMRCLYGLFKLGERIAYTAQRWKTAKDLYNRLWSIIRARPSLRSRVAKASLGQGVGYIELTNGAQIEFSTRSADSGRGLDKVDLLIYDEAYNVTDSEQSALSPTQLASNNPQTIYASTAVNEEQHPNGQILAGLRRKGLAGAPNLYFAEYMAPEEMDRDDPETWKYCNPSYGVIANDAKILKLRGELPQKSFDADLLGRGLWPVDEDAAAPEYVIDPQRWREMENREATLGKKVALAIDMSPDRRWVSIAAAARTDAGRVHLEVGYHAAPGPGLVRLLLSLIDRWDPCALVIDKASPAYSLHPDLVAAGIEPEVTTAAQMVQACGGFYDDAVTANLSHTGDPLLSSALEGATKRDLSGGGWAWNRKGNMTISPLVAATLAHWALKVYDVPKPMPAGPAFKPTVSEDAAVPALAGGFGGEVDVLTVGF
139934..141247                     PHAGE_Rhodoc_REQ2_NC_016652: portal protein; RHRU231_RS25795; phage(gi372449824)     3.25e-178           RhodococcusruberMAETTGTPSSFRETGYVNGSGMTEWQQWMSGEKVPDLRWPRSIAVFDRMTREDTRISSVLDATSLPALGTGWRIDGAGARDEVTEFVADNLGLPIKGADEPRQGQRIRSRGRFSWRLHLEQALLVNKHGHSFFEQVYRPGEDGRIWLRKLAPRPAATIRAIHVALDGGLESIEQHAPAGAPVEWLLRPQQIPVSRLVAYVRKPEPGPYQWIGQSMLRPAYKHWILKDELMRIQAAAARRNGIGVPVFTASPEESADPEKIEKYRQMASQYRGGESSGVGLPNGADAKLLGVQGNLPDLQQAIAYHDKQMALAALAHYLNLDGGGSYALASVQENTFVQSVQSQTESVRDTANAHIVEDLVDLNFGVDEPAPRIEFDDIGARQDLTASALKLLIDAGLIRLDRSLEEFTRQQYGLPPKDTPPPEQPWTPGTPNPQEDQ
141244..142464                     PHAGE_Rhodoc_REQ2_NC_016652: clp protease family protein; RHRU231_RS25800; phage(gi372449825)     5.00e-128           RhodococcusruberMNPFLRSPSAFQRTPVRAERPDPKTSAGGVVTLRLYDPLDSWGEWWGISAKEFVAVLDELPDDTREIRLLINSPGGEVWEALAILNALRAHPAKVIAVVEGVAASSASFIAAGVDELHMMRNAELFVHKAWGMCMGNADDMTKMSGYLEHEDRNIASVYADKAGGTVEQWLDAMAAETWYSADEAAAAGLADVVLDAESEQAQTVQNRFDLSVFNHAGRRATARPGPQDSSAEAEVATGKEGAVPTLKEEIAKSLGIAEDATDEQVLAAVNEALEERADPATGSEGAPVTTEAVTQAAAKFGLTVVDSAKLEQWQADAAAGRAALDRIERQDRERVVDEAVAKGKIPPANREHWLNLLAADPAAKDTLNALPDELAAPITEIGYSGVDPAQPSNVADHATYKNWSL
142466..142906                     PHAGE_Gordon_UmaThurman_NC_031249: DNA topoisomerase II large subunit; RHRU231_RS25805; phage(gi100005)     2.92e-53            RhodococcusruberMSAVLEVTKTGPKTFIPAERITGGQLVEARAAGRIGVAAAGSTKVLGVALTDAQNPEAEVTEPTTGPDGRPVLTATQLPTRVAVAYSGTEVKVTYSAAATFGDKLVATAAGKVGPAAATPDARTIVGICTEPAGVAANGVGLMRIA
142937..143878                     PHAGE_Gordon_Guacamole_NC_031265: hypothetical protein; RHRU231_RS25810; phage(gi100006)     1.77e-176           RhodococcusruberMTVDVVSVSDGPRITVAELVANPLFIPTKLMELMRNQFISEALLRDAGPNPSGVVAYREGDPMFLEDDVADVAEFGEIPVSHGKLGLPRTAFAVKRALGVRVSKEMIDENRIDAVNKQLTGLRNTFIRANDRSAKALLQSPVVPTMPVSTPWDDPTSKPRTDLAKAIEEITSAAPTEAQGGTGDEYFGFEPDTIVLHPGLLATLLDNDNVLKVYQGNLAEQNIAYTGALPATIFGLNVIQSRTFPRDRALVLQRGVVGFYSDTRPLQFTGLYPEGNGPNGGPTETWRSDASHKRAMGIDQPKAALWLTGLETP
143875..144294                     PHAGE_Gordon_UmaThurman_NC_031249: hypothetical protein; RHRU231_RS25815; phage(gi100007)     1.64e-20            RhodococcusruberMTEYILTATRFDQILARDEKGRVTHLVRRRRGDTVTGLDEGEVERLLRAGAIIDAEQVRPAAAPPVADGPSAAGAGDSDGQPAGDPAAADQSAPAPAAVPRPKQAADKDDWIAYAISRGWDEADARSMTKPQLLAALAE
144299..144661                     PHAGE_Rhodoc_REQ2_NC_016652: hypothetical protein; RHRU231_RS25820; phage(gi372449829)     4.42e-31            RhodococcusruberMAAFAIPEDIALGGRPLTEAQTVEAQLLLDAAASWIRDRKPDIAPDDPNAKLVSIQVVKAALVSEPYLGLSSYSKTVGEVTRSGTLAHPGQFLVFTDFHKELLGIPFRAGPAWSFKVGDY
144661..145005                     PHAGE_Rhodoc_REQ2_NC_016652: hypothetical protein; RHRU231_RS25825; phage(gi372449830)     6.86e-25            RhodococcusruberMVDDLGNQTVVLTPRIKAKHNDFVDGPPVPYPGCAVQPVQSDERREDGQATESRWKLLAPPGFPERTTSVLTVVGIVDDAGRPRRLHVDGELQTHYDDEGTAVYVGGYLTEWRG
145008..145322                     PHAGE_Rhodoc_REQ2_NC_016652: hypothetical protein; RHRU231_RS25830; phage(gi372449831)     6.50e-10            RhodococcusruberMAQQGRYRWSSRDARRIMGSRTVQSAVRRQAEKGRAAMGGSFGRTARVLPARGWDGRPGFRIAVPPSPQIRNPLAAEFGTRRSRGVNRLQSAINAAGRGGRRRG
145323..145724                     PHAGE_Rhodoc_REQ2_NC_016652: hypothetical protein; RHRU231_RS25835; phage(gi372449832)     1.72e-30            RhodococcusruberMVVAEPPLFADIETVLMVALADLAETDTVTPDEDTPVGIRINRVGGTDDGITDYPRVEISCYAPTRNEAQRLGERVRRRMLALGGEAFVVDGQKVTIDFCRTDTPPEGVPYDNPDRDRVVSWYLLGLMPPRPA
145807..146673                     PHAGE_Rhodoc_REQ2_NC_016652: main tail protein; RHRU231_RS25840; phage(gi372449833)     1.55e-103           RhodococcusruberMPSKVAQLEIARHQRELILKPRAAHVFGAPTTTPVVLNITEGPSSQLAELPVGYYDFGLLDKEDAITLSREMEKADINAIGYSNPVRSDITSDIFGMAFKGLETNRFNIETNLGVDLSGVTPDPVTGEVSFDQPAVALIRRQRYMMLSEVGSGVDTIYFGRQFLAGEVAETGEQTVTDGEGYLGWPFTVNAMVDTLYGVSVRHHFGGPGWKNLLEEAGFDPKATYVVTIGGNPTGGTFTLSFGGQTTAPIAFNATAAAVQAALEALSNLDAGDVTVTGTAGGPYTVKID
146803..147213                     PHAGE_Rhodoc_REQ2_NC_016652: hypothetical protein; RHRU231_RS25845; phage(gi372449836)     1.84e-06            RhodococcusruberMGTMRTFDPDGWTPRELVSPDGRRFTPSTRAEEGELLARRYRVASPEQDQDAGGEPVAPAPRDISPASEPVAAPAPADEATQPAPAAPGESIVDDVPDPAQVPAAAPVDAAETAPPKPRRARAATQPTPTTEESQA
147210..147578                     PHAGE_Rhodoc_REQ2_NC_016652: hypothetical protein; RHRU231_RS25850; phage(gi372449837)     2.60e-11            RhodococcusruberMSEAPIEIGRTATGGGSVKRFGGTAPAKEPYRFVLGDSPEFVIQEPDTGTMLELQSDRTSLRQGLRLLLLDQYETAEPFIEALSWDEFIDWQRDVFEYFGLDARRFEERQAANRFERRRRRR
147591..148406                     PHAGE_Rhodoc_REQ2_NC_016652: hypothetical protein; RHRU231_RS25855; phage(gi372449838)     2.77e-68            RhodococcusruberMETDPPDGDTESFFEQLLDEAAGPFFLDLDGRTIVVDVPSADGACTLDTAVTHTELLDALVGQDLADDILDVYEDRPVSELATLIDRIRAHFGLLVPPLGGFLRLVETIDLYGEAIERDLIDRNLNLYDWVREHEKTPWDKLFRFLERPIEGGYYTAALAADLELAERHAQWEAEHGKPTGAGRPSLVGWTRERDTDTAILETLRRIEAAVFQASPKIKGRGPKTPRPLPRPLTARERYDKYRLYVEHDDIASKVLGSRYKRLSLPDPTDD
148420..152805                     PHAGE_Rhodoc_REQ2_NC_016652: tape measure protein; RHRU231_RS25860; phage(gi372449839)     1.98e-141           RhodococcusruberMPDLSGGTAFVDVMPSMRGYFQRVRREIQGNPVEHQIEPSVDKSALDKAKKDLERAQKTVEASSQKVQALRRREADAAGATEVAEAKLQSLRERGVTDVGRLTAAEQSLAKAKRASQAASEELQRAEAAQRAAADAQRSAQSRVARVEARFDGQQAEQEADGFFSRILRRADDTGPGIGSRIASGIGRTLKTGMIAAGGAAAGFLGTAITLGIGRLTAIDDARGKLRGLGHDAASIDTIMTSALESVKGTAFGLGDAATIAASAVAAGIAPGKDLTRYLKLTADAASIAGASLDEMGSIFNKVQTNGVAMTDDLQQLADRGIPIFTWLQKEYGVTGESLREMVMMGKVDAATFQKVIEENIGGAALASGTTVSGAFDNAKAALGRFGAALVGPFFDQTTGVLGAITSKLDEMTNRVGPWAQKVSDSIRFAFELLVNGNYDGALGTALGLEEDSPIVAQLLGFRDKVGQFLDEYGPRLSDVFGKLRDAAIAAAPAVKEIVTSLGTAMGSAGLTTWELLVRTLEALAPAIETVLIPALGTLAGVMSENQGAVNTLIGGYLGFHAVGTVFDTAISGLESVKGAVGEVTGVIDTGKELYQTYTDATYGIAQAQSTLSGKMAAAAGAIRGKAAAENLSTLAATRALVAEKLHAGAMKVKAIAVKAATAAQWLWNAALNANPIGLILVAIGALVAGLVWFFTKTETGRRLWEQIWTAIQNAVRWAWENVIKPAWEGIQAGFAKIGQILQGVWDNVLSPVFTAIKYAVGIVLAAFVLLGMIFGVVWDAIVAVAQWAWNTVLRPVFDAIMWVFGQVGAFFGWVWNTLIKPAWDALAFGISWVWENIIRPAWDALTAALTAIGNFFVWVWNTLIKPAWDALGAGIAWVWDTIIRPAWDALTAALQAVGNFFTWIWNSVIKPAWDALGAGIKWVVDNVLIPIWDTLKGALDLVGRAFESVVDWIGRVWDRIKAIAAKPVRFIVETVYNKGIVAAWNKVAGWLDIEPLQEADLGELGHYAVGGRVRGPGGPADDKVPAMLSNGEYVVRTEAARAIGYDTLDRLNRRPRRMGESDYFHYAGGGRVQGGAELTTEIQRSMWDAVRTAFPGAVLTSGTRYQDVGSGYDFHMAGQAIDLGGPMQQIASWIAATYPNSLELFWDPGPNIDEGRPTGAIGGHSDHVHWAMSQMVTSDGRLVSAEGGSRGGGAGFLRRLAAGLFDGVMDPIGRAIPEFGGGQIGRLPKLAFDKFRNGVRDWILNRSDAVEGSSVPGSGPVVDQVRQAFAPYGWDTGAQWDAVDYIVSRESSWNPLARNPSSGAFGLFQFLGSTKDQYLPDENPNPLIQGQAGARYISDRYGDPLGARSFWEANHWYDDGGIARGRGIMMKDIIRPERVLDPDMTRSFDEKLIPILDRLTSLSVDDVLTASDRNALVSVDLSGAQIYGQYIEQQHVVDDKATARSVRRETKRAMVEAGLG
152802..153719                     PHAGE_Gordon_GMA4_NC_030939: hypothetical protein; RHRU231_RS25865; phage(gi100017)     6.47e-58            RhodococcusruberMSALHSRVQVRWASHLGTEWNLMSGTEGAILPKGLKSILLPKFTQLTHKTARRHGVRFEGIDWDAGDCTMTVVVGDTWVSRPAGNFRRGDEFLYLDRSFRDSFSPLYPGTLEVEALGESRSFSGRLVELDDGDVDTMPDVRGTAEYEITLAAESPFWRGKDVVFDFPFTGSATPDNYYGPTNAAPDFYITGGNAIGNAVLTNPGQVEVWPTWTIDGPGQAVVGVGEHITYVSGLAAGERLVIVTDPSHSEVVDGGGNRAWDRIGGLYDFAPVKPGDDVVATAQIIGGGPGANIRLELPTFYLAAY
153719..154891                     PHAGE_Gordon_GMA4_NC_030939: exonuclease A; RHRU231_RS25870; phage(gi100018)         6.74e-52            RhodococcusruberMAGRDARYLVYNRHRELLTSITEHESATVSWKWEDIGSGTIAIPGTPDPELLTAALKVHEEPLFISVYTPAPEPWTGRISGEYVDDGDGPVLELTIVNDRIWLDSMLAVANADVGPSLQDRESDVREGPLESVIKGYIADAAGRLQVPVMVVPSAVEDQSPIIKLSARMVTVKSLTDDVLRKYGYTITARTYRTGDPLPAAVHVAPEPGTVMIDVVAGRDTGRLLWQQEHLEQFSVSSTERKAYRAYIGGKGEGTARPFYEVIDTDARADSSNFGLPEIFVEANDENVDPLEAGRAELAAAAGGLSVNFTVVDGNPWWMGQDWANGDFAYARIAGQLFRAQITEVEMRDEAGSPVTYTPKCGVAAPGRPTAVVDAIARLAAEIRNQNARR
154897..155898                     PHAGE_Gordon_GMA4_NC_030939: hypothetical protein; RHRU231_RS25875; phage(gi100019)     2.92e-24            RhodococcusruberMAQTLTGFKGVVDEAGEARRFTMLAPPVVAGPSDLAPSSTGTRTIRLAAGAAMAAGVRYSETVTQDVVLPANTSGQPRFDIVGLRFTWGATPSVTTFSKQGTAAASPSSPAPTRTQGVVYEMVLALVYVRSGVTTIAAGDVYDTRVWGGVGGPYRANQATNLARVDIPLGAEILVGTSLYQVVTQNTAAATIGYTVVDPQTTAWKAFVPNLRNSSGQLITATTFWKDGRYRIANGMCRFKVRLGLYGTIGGWTNPDGVPYTMDLPVKVGAQLTDQWADATVMYPSWPSVHGKMLLRSGSDRGQIHVVANTNDVRIRVMNGRPELVTVDGSYLI
155912..157030                     PHAGE_Gordon_GMA4_NC_030939: hypothetical protein; RHRU231_RS25880; phage(gi100019)     6.04e-61            RhodococcusruberMVASIAGFKGTVTEVQEATRFALAGAKALVDTASAFKPTSTGVRSVQLAAGTAMVCGVLVVESAAQIVQVAANSGASARLDVVGLRFTWAGDNSSVQVFVKQGVVGSTTPPALTRVAGGTYEFPLAVVRVRPSVSTIAAADVLDVRVWGGFGGPFQAAQTEQIGIVDLPLGAVLQSGTTEYNVTANDGQGNSTLSLTSAAALPWTAYDPVLGTHKDGVCALGAGGVRRGWYQLDPATQTCHVKFEIRTGTGTRNFGRGTMYIDLPSGIRPSAVFTDQWGEGLLYTNVGDGWMNWMLKFLIRNDYNNFVVPYVTSAGHDTRLLPMQSAGDDGGIGNLDQVGTGGVPYIEQQSPRARVYSEPEVITGAFSFIVA
157045..157671                     PHAGE_Gordon_Lucky10_NC_031267: hypothetical protein; RHRU231_RS25885; phage(gi100020)     5.31e-51            RhodococcusruberMSIADPHNAAPIWSPNRYPGAATDCRYLVIHTQQGNGTARSLAGYCAQASSQVSYHDAADERELIQMVPYVDAPWAAANANTVAEHLCFGGSFAEWTAAQWLDPDKDADGRNQDLMLWRGALWVAWRAEINELPIRRVTDGTPPRSRGVCGHGDLGMWGGGHTDPGPEFPWPIFLDRAVHLAGGGAVGAAITGEDWDTVLAEFVGRGM
157671..158501                     PHAGE_Lactob_phig1e_NC_004305: minor capsid protein; RHRU231_RS25890; phage(gi23455811)     5.46e-17            RhodococcusruberMPARVVHPIKSTRGTGYGQRVNPVTGRREFHRGSDYSVPRKTPIYAPTDGTVVEGKDRPPNTVQGFGNWVWVDAQRTAGKDFIFGHMEHGDILVRRGDQVKAGDLIGYVGSAGQSTGPHLHFEVWGSPGFIGGEHMDPAAWLKRAGAVDPGAAPAPATTKTPAASVPSTTKGATVATAQDVQNELNGATSADTLTLYENMPNQFDDPKMRHWLRSVAAEMTFGEVENTAKDGAGKTDKTTMRGHILRTAAFARENNKLLRAIATHLQLDVNQILGS
158504..159613                     PHAGE_Gordon_GMA6_NC_030906: loader of DNA helicase; RHRU231_RS25895; phage(gi100045)     3.81e-34            RhodococcusruberMSKVKDLNPIQNIPRPIGGTDLGIPIVLPNGRVGYIFGDTFGGTTQAAGGPDWRSPVIVTSPTRDMTQPIVIDGACRGGDQLWPYQHNNGTFTTVLPCDAIVIGGRVYLWVMVTAGLGGELWCEIWYSDDNGETWVNGTNSTTKWSTTAFRGQRVMMTWDRGRDGWVYAFSTGGLARNKNMLLWRVREADILDPTKWEGRCWIGGAWVWKANPADHEPGDMMPAGEKFGEIGYRWIQGHHVLSGFRSSSYESFVRLGYGPIENVNWHTAPITRPVRGAGLPFGYDVQPSLYGCYVHPDSKFEKADGTKSQFVMIVSQWDGVNGSVPYRSMQYRFTAPNKLGPLVVDPAPNDAQPGSEWDAILAEFVGQP
159624..160112                     PHAGE_Mycoba_Myrna_NC_011273: gp245; RHRU231_RS25900; phage(gi203454806)             6.06e-21            RhodococcusruberMSADHDVESTTGAELPFWELVRREAADAARQEWERQQAAVRREVGDYARQVGTGVLTGQGMPEPVPNVTAVTARGEELTVVDARSRSWRTFVQGLAIDIGFALLSVLALALGDVDVLDGAAWATLGVLVLKTIIQTAISYVARLKITPRYAAAAPPPPEGAR
160197..160421                     hypothetical protein; RHRU231_RS25905                                                N/A                 RhodococcusruberMVVGIVVALWGTSVSAQIVSQFFRFEWVAPTGLNEIMTAVVMWLLARNHQAAKADPPPPPPQRPQADREAESRD
160414..160938                     PHAGE_Gordon_UmaThurman_NC_031249: DCTP pyrophosphatase; RHRU231_RS25910; phage(gi100024)     3.45e-09            RhodococcusruberMTELWETIIRYVLVGAASYAAGTVVQYRQYRVRGVSLLVPFVPKSSRNFTIVVVTLSLLTTFSVITSQIAQQHQAECNADFQRALRENARINSEDRDLEKRDDALREQRDAALTDLVRGLLTAPPGGNGRVRDLLERYDTTVAVNDRERADLIAARGALEQQRRDNPYPEPRCD
160954..161610                     PHAGE_Rhodoc_REQ2_NC_016652: main tail protein; RHRU231_RS25915; phage(gi372449833)     1.27e-87            RhodococcusruberMPSRVAQLELARHQRELILKPSEAHVFGAGPTAPMMSSITTGDVATLAELPPGWFDYGLIDKEDAIVWAREMEKSDINAIGYSNPVRSDITSDVFSLAFKGLETNRHNIETGLQVDLSGVQPEQGTGEVSFDQPAVAQVRRGRFLTLARSGYGADAIYIGRLIAAGEVAETGEQTITDGEGALAWPATVNAMIDTAAGFSVRHFFGGPGWKRLLVDLGF
161780..163312                     PHAGE_Gordon_GAL1_NC_031936: hypothetical protein; RHRU231_RS25920; phage(gi100029)     1.77e-163           RhodococcusruberMARKIVTIDEDSKALPDVAREAIDARIGAVGDPKYLSKAAADATYAPTDVVESAGLVALSESSGLSLAAVDANGNLSWFGVDNTGGIPRYTADAINKAIGTSTVTIPNACHEWWILDAYTWLPAEQRMIATVYGTDGSIRACEWRPGMGLTVNVVVGSTPIVDDHNAPGHWVKPGRRAVLCWQRHANDNKLRVAVSAPGPDVASWQDSVVTEATIADEVSYGSPLHIASLSDADQDTFWIPVRVAAGVSWRFQQISVNQSTGAVTVGPVRFFVQSSGGQFYCSFADANKTSGNQVIRVAAYHNPAMADNHIWYMEIDCVTGDVTSPVHAAGAPFTNVLSATSDVQLNGNQASPAITPIMAHSASVDRRMFYVSPGPYKPRVAYAEWAAGSPDAAMYRVYDVQAGTSKDIATAGPRFGYTAEANYLAGMCFESPAVDDTVYVARNLPVKTIERHWTGRGGAASMKILAASTTTTPIRPLCAKGNGPALMFFDMRQYADFAPLGDVRSVNAK
163321..164181                     PHAGE_Gordon_GAL1_NC_031936: hypothetical protein; RHRU231_RS25925; phage(gi100030)     5.76e-88            RhodococcusruberMGIKLEVTNTYGGFGKLVNDQRLNAGSLILIDPAHPVSPWSAGVPSGSVPNLAAPMTALTVGAGAETLPVTNTIAAGSGLVERTSKGGLHVIMSKTASVAAQVLTLDLTTALMTYLNANPGHSLFLSAWGRTTRARTIGSGPAAIPLVGLRSTSTSTFTPWTSLYHASSGNIATDPGTSNTNYIGRTVGTLSSGLGSFRADLGITSRAASWVSTLNTRFVELGNALSTATNHAPSQILYAVCLEDLTVSGRSYIEASQMDAALYAQAFGAGGRYASDTFTNPTTLP
complement(164491..165531)         PHAGE_Clostr_phiCD27_NC_011398: putative phage DNA-binding protein; RHRU231_RS25930; phage(gi209901309)     6.18e-25            RhodococcusruberMNHDPNLRLKQLRAKVGMTQGEFANALGVTQSLLSQVERNERRATPNVLESAVLRFNLAPDYFDVPPVHYNRQSLNFRRNVLTARAQDAAIYTFGDIEREVQQLLTGVPFRNIALDTRPRSTCLSLEEISEAAARTRSALALDPHTPIRNVTRAFERAGIGVVPFESDVVPEGKLDGISSPNDNGANFVIAIARRDSGDRIRFTVSHEGGHLVLHTRSRPDSEQVRETEANLFAGAFLLPEAPMRSDLSPDLTLLGYSKLKAKWGVSIQALIRRSLTLGVIDQNRYKSLMIQLSSRGWRTNEPVEVGFEEPRLVPHVTARPPAPAAPDRTGANVISLASRKRPPRD
complement(165528..166109)         hypothetical protein; RHRU231_RS25935                                                N/A                 RhodococcusruberMVDTLHEAFTRAYEGARRLDYAAAREPGWFRTATFKRKLADELPARLGTFVFDEALAVRAPRLLLLDDDNSLRISVRRSTGLSRAMARKRTAPNPGLFPASELELERSNTIDLAALAWDWPQRDDDGELTGPWPLSFLMAQPDHTLDEGRWAFSLPLVVGTTLAEHVEAFSPEDEPLIFLDAEDEDEGKESAG
166050..166061                     attR                                                                                 N/A                 GTCGAGGCGGCG
166312..167244                     PHAGE_Gordon_Utz_NC_030921: hypothetical protein; RHRU231_RS25940; phage(gi100031)     2.03e-78            RhodococcusruberMTVSDATLLPLAGGPSAPARFTPFDLAVAGFLARYSGQTFASYQTDLRLYSQWCDSVGLDPLAAQRPHLELFARHLELERGNAPSTVHRRLSCLRMLYRTMHVDGLIDRNPAEYVKMPKVYFDETRMVGLERSEISALIATARASTPCDGAVVTMLALLGLRVSEACAVDIEDFQSTERGHRVLRLVGKGGKPATVPLPIPIARAMDRAAEGRTSGALLLRRDGTRMTRRSADRVVKRLARKAGITRTVHCHLLRHGYVTAALDAGIPLRDVQIMARHSDPRMTSRYDRARHNLDRHGNYVLAAYLGGAA
