gi|00000000|ref|NC_000000|  Chlamydophila abortus genome assembly CAAB7, chromosome : 1. [asmbl_id: NC_000000].1144467, gc%: 39.86%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
complement(361705..363294)         PHAGE_Bacill_G_NC_023719: gp245; AB7_RS01630; phage(gi593777701)                     3.58e-09            MSIVLDKIGKTLGTRVLFDDVSVVFNPGNRYGLTGPNGAGKSTLLKIITGSVEPTRGSISLPKKVGILRQNIDSFGDVSVLDCVIMGNARLWDAWQKRDALYLEEFTDAIGIKLGEMEEIIGEENGYRAESEAEELLTGIGIPEALFNSKMSAMPIDLQFRVLLCQSLFGHPEALLLDEPTNHLDIHSINWLGNFLKDYDGTVIVVSHDRHFLNTITTHIADIDYDTVIIYPGNYDAMVEMKTASRDQEKADIKSKEKKIAQLKEFVAKFGAGSRASQVQSRLREIKKLQPQELKKSNIQRPYIRFPLSEKASGKIVFSLEGITKSYNDETPLFQPFSLEIYQGDKLGIIGNNGLGKTTLMKLLAGVESPTQGSIKTGHQVAYSYFPQNHSDVLKDCGDETLFEWLRNRKTGINDQEIRSVLGKMLFGGDDAFKQIKALSGGETARLLMAGMMLENHNTLILDEANNHLDLESVSALAWAINDYKGTAIFVSHDRTLIEECATKLLIFEKGKITFFDGTMADYTSSSKL
complement(363347..364285)         PHAGE_Mycoba_Phrann_NC_031266: capsid scaffolding protein; AB7_RS01635; phage(gi100037)     5.08e-22            MVSAFYAFLDYLKNIKTASPHTLRNYCIDLNSFKTFLEKHGELTPSPPICLLTKERQEAELPFSLLTKDTVRLYILKLMQENKAKRTIKRRLSAIKSFSQYCVKQRILPDDPTETIQGPRLPKELPSPITYEQVEILMATPDLSKYTGLRDRCLLELFYSSGLRISEIVAINHWDIDFTSHLIRIRGKGKKERLVPITPHAAQWLQHYLTHPARTSIEKDAQAIFLNRFGKRLTTRSIDRKFQKYLRQSGLSGHITPHTIRHTIATHWLENGMDLKTIQALLGHSSLETTTIYTHVSMKLKKQTHNESHPHS
complement(364330..365250)         ribonuclease Z; AB7_RS01640                                                          N/A                 MSCRELVILGCSSQQPTRTRNQGAYLFRWNNEGLLFDPGEGTQRQFIFANIAPTIVSRIFISHFHGDHCLGLGSMLMRLNLDKVTHPIHCYYPASGKKYFDRLRYGTIYHETIRVIEHPIDKEGIVEDFGNFRIEARKLNHLVDTLGWRITEPDTIKFIPEKIKAAGLRGPIMQDLLRNEHVTVNGKTLYLKDLSYIRKGDSIAVIADTLPCPSIVDLAKNARIMLCESTYLEEHSHLAESHYHMTAKQAATQALAAGAQQLVLTHFSARYLNSKEFEIEAGKIFPNVTAAEEFRSYPFPKNPSSK
complement(365353..366024)         serine rich exported protein; AB7_RS01645                                            N/A                 MTSSRLVPNAAISKNQTSHTITQNSEHNTAVLKRNKLITLICLLIMALLALIMVGGFLATPFFAAGMYIGMAALASLLISMVVFPLVISYLPQPSTHVRPRDLDLSKLDVRHNRLLHEIIKEDEKKYAQEQEVKQQRRQRRSLRSLPQRRPVEVSSSDEAPKPRRKTSSVLNLIRPRSSSSASSHSSSHDSDSSSGEHQTQQPMVVTRPVFPKKYENYMHCID
complement(366164..368620)         PHAGE_Cronob_vB_CsaM_GAP32_NC_019401: ATP-dependent Clp protease ATP-binding subunit clpA; AB7_RS01650; phage(gi414087147)     6.27e-05            MDSTINNDSQILDPNPEEVEKLLDESEEVEEKSDDRSLPADLFILPLNKRPFFPGMAAPILIESGPYYEVLKLLAKSSQKYIGLVLTKKEDADILKVGFNQLYSVGVAARILRIMPIEGGSAQILLSIEERIRIVEPLKDKYLKARVSYHKDNKELTEELKAYSISIVSVIKDLLKLNPLFKEELQIFLGHSDFTEPGKLADFSVALTTATREELQEVLETTNMHDRIDKALILLKKELDLSRLQSSINQKIEATITKSQKEFFLKEQLKTIKKELGLEKEDRAIDLEKFMNRLKKRQVPDYAMEVIQDEIEKLQTLETSSAEYTVCRNYLDWLTIIPWGIQSKEYHDLKKAEIILNKDHYGLEDIKQRILELISVGKLSKGLKGSIICLVGPPGVGKTSIGRSIAKVLHRKFFRFSVGGMRDEAEIKGHRRTYIGAMPGKMVQALKQSQAMNPVIMIDEVDKIGASYHGDPASALLEVLDPEQNKDFLDHYLDVRVDLSNVLFILTANVLDTIPDPLLDRMEILRLSGYILEEKLQIATKYLVPRARKEMGLTAREIVFQPEALKHMINNYAREAGVRTLNGNIKKVLRKVALKIVKNQEKAHPKYTQYKINVNNLQDYLGKPIFSSDRFYDHTPVGVATGLAWTSLGGATLYIESVQVPSMKTDMHLTGQAGDVMKESSQIAWTYLHSALERYAPGYSFFSKSQVHIHIPEGATPKDGPSAGVTMVTSLLSLLLDTPILENLGMTGEITLTGRVLGVGGIREKLIAARRSRLNVLIFPEDNRRDYEELPAYLKKGLKIHFVAHYDDVFKVAFPHMN
369264..369905                     PROPHAGE_Escher_MG1655: protease specific for Gcp(YgjD), essential for nucleoid maintanence; AB7_RS01655; phage(gi16129761)     4.72e-05            MYFHRYVIIDTSGYQPFLAYVDHQKVLKQWDLPVGPDQGLVLEFIFKNSSLSFQGIGVAVGPGNFSATRVGLSFAQGLALSRKVPMIGYSSLEGYLTPKDKGKALMLPLGKKGGVLTLSSDLSEDGFIHEKNGVGPGILLPYGEASKYCVANNCYHVISPNPELFIESFSNRIRIEKAAPSVDHIRRNVVSQLMILECSQQLTPDYRSCSCFF
370105..370281                     30S ribosomal protein S21; AB7_RS01660                                               N/A                 MPSVKVRVGEPVDRALRILKKKVDKEGILKAAKAHRFYDKPSVKKRAKSKAAAKYRSR
370311..371486                     PHAGE_Cellul_phi17:2_NC_021798: chaperonin DnaJ; AB7_RS01665; phage(gi526177822)     6.87e-11            MDYYDVLGVSKTASPEEIKKSYRKLAVKYHPDKNPGDAEAEKRFKEVSEAYEVLSDPQKRESYDRYGKDGPFAGAGGFGGAGMSNMEDALRTFMGAFGGELGGSGSFFEGLFGGLGEAFGMRGDPAGARQGASKKVHITLTFEEAARGVKKELLVSGYKTCETCSGSGASSKQGIKCCDRCKGSGQVVQSRGFFSMASTCPECGGEGRMITDPCSSCRGQGRIKDKRSVHVQIPAGVDSGMRLKMEGYGDAGQNGAPAGDLYVFIDVEAHPVFERRGDDLILELPIGFVDAALGMKKEVPTLLKEGACRLTVPEGIQSGTILKIKNQGFPNVHGRGRGDLLVRVSVETPQNLSEEQKELLRKFAATEKAENFPKKRSFLDKIKGFFSDLTV
371521..373557                     PHAGE_Synech_S_SM2_NC_015279: transketolase central region-containing protein; AB7_RS01670; phage(gi326781943)     8.74e-11            MVAIQHELGSSIKEVLKLVWSLRFAENKMLLLSRQSDSGGTFQLSCAGHELVGVVAGKSLLRGKDWSFPYYRDQGFPVGLGCDLSEIFASFLGRLAPNHSSGRMMPYHYSHKKLRICCQSSVVGSQFLQAAGRAWAVKHTKSNEVVYVSGGDGSTSQGEFHEMLNYVALHKLPLVTVVQNNAWAISVPFKDQCSTDLVRLGESYQGLSVYEVDGGDYLKLVDTFSKAVDQARHTSVPALILVDVMRLEPHSNSDNHEKYRSREDLDHCKSHDPLIRLERLMIDECGISPAEILDIKAEAEAEVTRACEIAEGMPFPSKGSTSHDVFSPHTTSLIDYENSLEAQRLRDTQPKVMRDAITEALIEEMSRDSGVVVFGEDVAGDKGGVFGVTRNLTDRFGSERCFNTPLAEATIIGTAIGMAMDGIHKPVAEIQFADYIWPGINQLFSEASSIYYRSAGEWEVPLVIRAPCGGYIQGGPYHSQSIEAFLAHCPGIKVAYPSNAADAKALLKAAIRDPNPVVFLEHKALYQRRIFSACPVFSSDYVLPFGKAAITQVGSDLTIVSWGMSLVMSMEVAKELAALDISAEVIDLRTIVPCDFSTVIESVKKTSKLLIAHEASEFCGFGAELAATVAEQAYAYLDAPIRRVAGLHAPVPYSKILENEVLPQKEKIFQAAKSLAEF
