gi|00000000|ref|NC_000000|  Campylobacter jejuni genome assembly NCTC11351, chromosome : 1. [asmbl_id: NC_000000].1766442, gc%: 30.23%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
complement(179028..179747)         PHAGE_Bacill_CP_51_NC_025423: putative resistance protein; AT682_RS00925; phage(gi725949539)     1.18e-13            MFEWIFSIDAWITLATLSALEIVLGIDNIIFLAILVSKLPPEHRDKGRILGLAFAMITRILLLLSLFWVMKLVTPLFSVLGNEISGRDLVLLLGGLFLIVKSIKEIKEQISHQEESQSHFKASNKLWIVVAEIAVIDIVFSLDSVITAVGIAQDVTIMIIAVIIAVAVMLFASKPIADFVEKYPSIKILALAFLVLIGVVLVAESFDIHIDKAYIYTAMAFALVVQILNILDQRKEKNG
complement(179819..180385)         PHAGE_Prochl_P_SSM7_NC_015290: PRGA-formyltransferase; AT682_RS00930; phage(gi326784531)     3.38e-34            MLVKLAVLFSGNGGNLENILEKLHKKTIGENTYEVVLCLCNKKDAFGIQRAKKFGLDTVIVDHKAYNTREEFDTILVQKIKESGANLTVLAGFMRILSPVFTKNIKAINLHPSLLPLFKGAHAIKESYESDMKVAGVSVHWVSEELDGGMIIAQKAFEKRNLSFEEFEEKIHSLEHEILPLSVIEIFS
complement(180376..181746)         bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase; AT682_RS00935     N/A                 MKAIIDNIKILEQNAINKGLDELILMENAGLNLAKLIKKEAKKIRIQRKIRKVKTLFLLGGGNNASDGLVALRNLKHAKAYKIGFKENTLFKKQEQILQNYAFKFCKKEPNFKKFHIIVDCILGTGSNRCLDEKTSLIIQKVNQSKALKIACDIPTNLGFYPCFKADITFCMGALKEILLEDFAKEFVGRIKIANLGISSKKFYPNSQAFLLEKKDLKTIDRKINANKGNFGHIYIVANASAGTLAGLGALNFGAGLVSLVAQKSFSPLLMLKEKIENNASAIALGMGLENLDFLKDEILQNTPLILDANCFLSEALLWYLNRKDIVITPHPKEFIKLYKMCFDENLDIETLQKNRFFYARKFSQNYDCVLVLKGANPIIAQKEKLFVVNLGNQALAKGGSGDVLSGMIAAHLGFGFSALEAAKNATLAHGLVAKKYKFNKNSFDALKLIKGLKCL
complement(181730..182428)         hypothetical protein; AT682_RS00940                                                  N/A                 MENKSIAIFIDAENIPAKYAKSIFDIASDYGEVIIKRIYGDWTQKNIQGWREQIAEYSLIAMQQFNFAANKNSSDMYLITEIMSIFYEKNIDIFVIVSSDSDYTSLIQKLRENKKQVIGMGLEKSIKSYVNAFSEFFYLDKDESKKEDILSKDYLRALINITEQLIDEKGRAEYAQIRTNMNRKYSDFHPQNYGFKNFRALIQKFLPKMKKFEEEREKNIYFLVKKDYESYY
complement(182430..183935)         PROPHAGE_Escher_Sakai: putative ATP-dependent protease; AT682_RS00945; phage(gi15833954)     2.75e-87            MKKLKCISFHEGLDIIEVESTFTRGLPNLSIVGLASVAIKESVERIKATLLSCDFAFPAKKITINLSPSGIPKKGSHFDLAIALLILLQNEELDDFFVVGELGLDGSIKSTNELFSLLLFLSAKIKKAKIVVPKSIAQKASMIPNLEVYGLENLNEAIEFFKEKNYENFRFSHNHPLFASPLQIENEIFLQNMDFKLDFKDIKGQEKAKRACMIAALGMHNILLEGSPGSGKSMCAKRLVYIMPPQSLSEILTQNAYMSLDSKDCEFTKIRAFRHPHHTSTRASIFGGGTKNARIGEVALANGGVLFFDEFPHFNKQIIESLREPLEDHKIHISRVNSKITYETKFSFIAAQNPCPCGNLFSKNLSCVCSENEIKKYKNHISAPIMDRIDLYVAMDEISKDDKTSISSKEMSEKILQAFIFSKKRGQKEFNGKLKDEDLSRFCVLEKDAKDTLDLAISRYNLSLRSLNKILKVSRSIADLEQSLNINKTHILEALSFRARN
complement(183932..184459)         PHAGE_Caulob_CcrColossus_NC_019406: putative peptide formylmethionine deformylase; AT682_RS00950; phage(gi414088160)     1.51e-23            MVRKIITYPNPRLFLNSEIVNKFDTELHTLLDDMYETMIASNGVGLAAIQVDIPLRVLLVNIFDENDEQKKEDLLEIINPEIIPLDEEMITCTEGCLSVPDFFEEVKRYNHILLKYQDRFGEFKKLEAKGFLAVAIQHENDHLNGHLFIEKISFAKRQKFDKEFKKKKKNHKKEK
complement(184495..185079)         PHAGE_Bacill_G_NC_023719: gp257; AT682_RS00955; phage(gi593777713)                   3.27e-58            MFIPYVIEKSSRGERSYDIYSRLLKDRIIMLSGEIHDELAASIVAQLLFLEAEDPTKDIYLYINSPGGVITSGFSIYDTMNYIKPDVCTICIGQAASMGAFLLSCGAEGKRFALPNSRIMIHQPLGGARGQATDIEIQAKEILRLKTILNDILAKNTKQKVAKIAKDTERDFFMSAQEAKEYGLIDKVLEKSFK
complement(185079..186413)         trigger factor; AT682_RS00960                                                        N/A                 MEVKAKQLDSVNATASVKIPSGMIKSEVENLAKKASKSVKMDGFRPGKVPVSAVLKRYERELTQDAEQNLFKSAVNNALQELKKESKELVGEPYFEKFDRKDGEIIAELILSFKPEIKLEGYEKLIPEYQTPKVSKKEIDEKKDELLKRFTTPEAIKTKRALKEGDFAKFDFEGFVDDKAFEGGKAENYVLEIGSKQFIPGFEDGMVGMKIGEEKDIKVTFPKEYGAAHLAGKDAVFKVKLHEIQELKIPELDDEMLKKLLPGEEKASVEVLDEKLKEQIKNEKLFKLVNDELKGKFADALIEKYNFDLPKGIVEQETDMQMRAAFNTFSEKEIEELKASKEKYQEKRDSFKEEAQKSVKLTFIIDELAKLRKIEVNDQELIQAIYFEAYRYGMNPKEHLESYKKQGALPAVKMALIEEKLFNDIFMPKTEKSEKASKKEKEDK
186556..187128                     PHAGE_Pseudo_NP1_NC_031058: hypothetical protein; AT682_RS00965; phage(gi100036)     7.05e-60            MQKKFEDCVKTMLEIIGENPNREGLIKTPNRVFKAYEFLTSGYTQNVKEILNDALFESSNNEMVLVRDMEFYSLCEHHLLPFFGRAHVAYIPNKKVVGLSKIPRLVEVFARRLQIQEQLTEQIAQALMENVDAKGVGVVIEARHMCVEMRGVQKANSTTTTSALRGIFLKNEKTREEFFSLINSAKQVRF

#### region 2 ####
complement(1469798..1470472)       PHAGE_Bacill_SP_15_NC_031245: type II N-methyl DNA methyltransferase; AT682_RS07460; phage(gi100148)     2.46e-09            MQAIILCGGLGTRLKSVIKDIPKPMAPINDKPFLEFIFKYLKKQSVKEIILAVSYKYEVIQEYFKDEFLGIKIKYSIEKEPLGTGGAIKQALKFIKNELYVLNGDTFFDIDLSKLKLDKSKICLALKQMNDFDRYGTINIDKHGLVISFKEKVFKKQGLINGGIYLLTKDIFNDFALQEKFSFEEFLQENYKKLKARACIFDDYFIDIGVPEDYYNFTSNQSYF
complement(1470460..1471065)       PHAGE_Caulob_Cr30_NC_025422: phosphoheptose isomerase; AT682_RS07465; phage(gi725949171)     1.76e-19            MENLNSYIKGHFQESILVKEQILKDENLITLIKNASLEVIKAYKNGNKTLLAGNGGSAADAQHIAGEFVSRFYFDRPGIASIALTTDTSVLTAIGNDYGYANLFARQVQAQGVKGDVFIGISTSGNSKNILKALELCKQKEIISIGLSGANGGAMNELCDYCIKVPSTCTPRIQEAHILIGHIICAIVEEELFSKGFSCKQ
complement(1471053..1472072)       PHAGE_Caulob_Cr30_NC_025422: D,D-heptose 7-phosphate kinase; AT682_RS07470; phage(gi725949173)     7.06e-22            MKTIRTQTPLRLGLAGGGTDINLYCDKYTGYVLNATISLYIHCTLIEREDGKIIFDSPDTNSYSEYESKEFLGDDGKLDIFKSIYNRIVKDFTKKPLSFSLHTYSDVPSGSGLGGSSTLVVGVIKAFAEWLNLPLGEYEIAKLAYEIEREDLGIVGGAQDQYAATFGGFNFMEFYDNKRVIVNPLRIKNWIASELEARIVLYFTNITREAKDIEEHKKGKLGDEKSLEAMHAIKQDAIKMKEALFKADFDTLAKILGKSWQSKKIISEIVSNDELERIYKLAIDNGAYSGKTSGAGAGGFMFFFVDPTKKYNLIKALSKEQGYVQDFSFTKEGVKSWRI
complement(1472147..1473085)       PHAGE_Synech_ACG_2014f_NC_026927: hypothetical protein; AT682_RS07475; phage(gi100233)     8.95e-14            MSKKVLITGGAGYIGSVLTPILLEKGYEVCVIDNLMFDQISLLSCSHNKNFTFINGDAMDENLIRQEVAKADIIIPLAALVGAPLCKRNPKLAKMINYEAVKMISDFASPSQIFIYPNTNSGYGIGEKDAMCTEESPLRPISEYGIDKVHAEQYLLDKGNCVTFRLATVFGISPRMRLDLLVNDFTYRAYKDKFIVLFEEHFRRNYIHVRDVVKGFIHGIENYDKMKGQAYNMGLSSANLTKRQLAETIKKYVPDFYIHSASIGEDPDKRDYLVSNAKLEATGWKPDNTLEDGIEELLRAFKMMKVNRFANV
complement(1473109..1474143)       PHAGE_Synech_S_CAM7_NC_031927: thymidylate synthase; AT682_RS07480; phage(gi100225)     1.02e-32            MKKTALITGFTGQVGSQMADFLLENTDYDVIGMMRWQEPMDNIYHLSDRINKKDRISIFYADLNDYSSLQKLFESQRPDVIFHLAAQSYPKTSFDIPIETLQTNIIGTANILENIRILKAKDGYDPVVHICSSSEVYGKAKAGVKLNEETAFHGASPYSISKIGTDYLGRFYGEAYNIRTFVTRMGTHSGPRRSDVFFESTVAKQIALIEAGYQEPVIKVGNLSSVRTFQDARDAIRAYYLLSLESEKGKVPCGEAFNIAGEEAFKLPEVIDILLNFSDMGGGIEVRQVEDRMRPIDADYQMFDNGKIKSFIDWKAEIPVRQMLKDLLNHWRNEIKRGRIPLNR
complement(1474152..1475210)       PHAGE_Synech_ACG_2014f_NC_026927: hypothetical protein; AT682_RS07485; phage(gi100224)     9.73e-82            MQKDSKIYIAGHSGLVGSAILNELKQQGYKNLVFKTHFELDLTNQKAVADFFEREKPEYVILAAAKAGGILANNTYRADFIYQNLMIECNVIHNAYLHKVKKLLFIASTTVYPKNATLPTSEEQMLSGDLEYTNKPYAIAKISGLMLCESYNLQYNTNFIAITPTNLYGNNDKFDLEKSHVLPGILRKMHLAKLLNEKRYEDLLNDLKFDSIEEAKNYLKKFGVDKDNVEIWGSGKPTREFLHSQDLANACLFIMNNIDFKDLKSDNTEIINTHLNIGPHKNITIKELAELIKNIVGFKGKLVFNLNRPDGAMQKFTDCSKIHSLGWKHKIELEDGIKMMYKWYLKEQNIRQ
complement(1475220..1476143)       hypothetical protein; AT682_RS07490                                                  N/A                 MEKLLQELNVNIKVGNQLSYQILMSNIISNLDIDKRDKEILFLLLQDRDRNYIRINNNEQCYRNIVNYLNLIRPLELPLYDLLRIGGNGDGGYVMYNGGGYMSNIDAKALSLGVSDSSPWDLEMAQRGFKVIEYDASIEKCPYSHENIIFHKKFIGNINNENTITLAQALKDNNLDESRPNILQCDIENCEWDMLENIDISILNKYFSQVIFEFHGCNPEEQDGVEKRISLLKKLNEYFIPIHTHLNNHGKIFYSKGLFFSTTLEVSYLRRNELNLMQGLHYRKECGNLQNLDFPVWPSNPEIPLRF
complement(1476146..1476691)       PHAGE_Entero_phi92_NC_023693: Phi92_gp065; AT682_RS07495; phage(gi726646998)         2.88e-21            MAIEFNIQESKILKGVYIITPNKFRDLRGEIWTAFTSKAVDKLLPNGLKFIHDKFIHSKHNVIRGIHGDVKTYKLATCVYGEIHQVVVDCRKDSPTYLKYEKFIINQDNQQIILVPAGFGNAHYVTSESAVYYYKCAYKGDYVDAPDQFTYAWNDERIGIDWPTNSPILSERDILATKNKG
