gi|00000000|ref|NZ_LOGH01000001.1|  Escherichia coli strain STEC 1303 STEC1303_contig_1, whole genome 477596, gc%: 50.70%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

#### region 1 ####
complement(1..564)                 PHAGE_Entero_DE3_NC_042057: hypothetical protein; AML22_RS00005; phage(gi100024)     8.00e-133           EscherichiacoliMTNTAKILNFGRGNFAGQERNVADLDDGYARLSNMLLEAYSGADLTKRQFKVLLAILRKTYGWNKPMDRITDSQLSEITKLPVKRCNEAKLELVRMNIIKQQGGMFGPNKNISEWCIPQNEGKSPKTRDKTSLKLGDCYPSKQGNTKDTNTKENRKDYSSENSGESSDQPENDLSVVKPDAAIQSGSK
complement(597..890)               PHAGE_Entero_HK633_NC_019719: CII protein; AML22_RS00010; phage(gi428782569)         2.50e-64            EscherichiacoliMVRANKRNEALRIESALLNKIAMLGTEKTAEAVGVDKSQISRWKRDWIPKFSMLLAVLEWGVVDDDMARLARQVASILTNKKRPAATERSEQIQMEF
complement(1010..1225)             PHAGE_Entero_Sf101_NC_027398: Cro; AML22_RS00015; phage(gi849122302)                 1.70e-45            EscherichiacoliMQTLSERLKKRRIALKMTQTELATKAGVKQQSIQLIEAGVTKRPRFLFEIAMALNCDPVWLQYGTKRGKAA
1295..1307                         attL                                                                                 N/A                 TGTGAAGATTGGG
1329..1961                         PHAGE_Entero_Sf101_NC_027398: repressor cI; AML22_RS00020; phage(gi849122301)        8.93e-153           EscherichiacoliMSISSRVKSKRIQLGLNQAELAQKVGTTQQSIEQLENGKTKRPRFLPELASALGVSVDWLLNGTSDSNVRFVGHVEPKGKYPLISMVRAGSWCEACEPYDIKDIDEWYDSDVNLLGNGFWLKVEGDSMTSPVGQSIPEGHMVLVDTGREPVNGSLVVAKLTDANEATFKKLVIDGGQKYLKGLNPSWPMTPINGNCKIIGVVVEARVKFV
1958..2362                         PHAGE_Entero_HK633_NC_019719: hypothetical protein; AML22_RS00025; phage(gi428782566)     1.45e-93            EscherichiacoliMIRIAALLSILLTTSANSECWIVTNLHGYGAMNGDRYEFTKDSTEDSVFNVTINGDKSSVYESVSGVYPEMKYTALSSNTMVGEYQSGGGITVETWSITTDKKALYSKVMNIPGMQQLTSTKSFVGDVVGTCNQ
2583..3038                         PHAGE_Entero_lambda_NC_001416: early gene regulator; AML22_RS00035; phage(gi9626289)     2.63e-82            EscherichiacoliMCDTKRSIGRKCESGLAANVPLRGVFVQDYDSHTQPKLTDRRIQMDAQTRRRERRAEKQAQWKAANPLLVGVSAKPVNRPILSLNRKPKSRVESALNPIDLTVLAEYHEQIESNLQRIERKNHRVWYSKPGEFGITCQGRQKVKGESIPLA
3047..3916                         hypothetical protein; AML22_RS00040                                                  N/A                 EscherichiacoliMKKIDYKSIPKPIDSASERKKHKKEAEKLANYISFIRNNAHGDGDKKLLSDARTQAFGILRKQMQYRLHPGYIIEIRPTERQLFLLNSVFDFVNVVGDLIDRSVDKDPDTNSFLLTNKEYLYGKFGINGWQKYVRFLRAFVDAYKNSDMIYTYLPGGDNCTLSADNRIFIPVLGLGLINAVNEKDVIIVKQWRKYEGYRYLPCFDILKIQNKFYVKIKYKEDIFFLRKNKDLLQELSGTIDVILGSRFIKELKESRSFSRVEISESELWGISNNPVNHAHQRNPNKKWS
4105..4473                         PHAGE_Entero_DE3_NC_042057: hypothetical protein; AML22_RS00045; phage(gi100017)     2.39e-84            EscherichiacoliMSNIKKYIIDYDWKASIEIEIDHDVMTEEKLHQINNFWSDSEYRLNKHGSVLNAVLIMLAQHALLIAISSDLNAYGVVCEFDWNDGNGQEGWPPMDGSEGIRITDIDTSEIFDSDDMTIKAA
4546..4710                         PHAGE_Escher_PA28_NC_041935: hypothetical protein; AML22_RS28765; phage(gi100023)     9.60e-34            EscherichiacoliMQYAIAGWPVAGCPSESLLERITRKLRDGWKRLIDILNQPGVPKNGSNNYGYPD
4679..4822                         PHAGE_Entero_SfI_NC_027339: host-killing protein; AML22_RS28770; phage(gi849250261)     3.01e-27            EscherichiacoliMDQTIMAIQTKFTIATFIGDEKMFREAVDAYKKWILILKLRSSKSIH
4898..5194                         PHAGE_Stx2_c_Stx2a_F451_NC_049924: hypothetical protein; AML22_RS00060; phage(gi100022)     1.65e-65            EscherichiacoliMNAYYIQDRLEAQSWARHYQQIAREEKEAELADDMEKGLPQHLFESLCIGHLQRHGASKKAITRAFDDDVEFQERMAEHIRYMVDTIAHHQVDIDSEV
5200..5985                         PHAGE_Escher_SH2026Stx1_NC_049919: hypothetical protein; AML22_RS00065; phage(gi100010)     0.0                 EscherichiacoliMSTALATLAGKLAERVGMDSVDPQELITTLRQTAFKGDASDAQFIALLIVANQYGLNPWTKEIYAFPDKQNGIVPVVGVDGWSRIINENQQFDGMDFEQDNESCTCRIYRKDRNHPICVTEWMDECRREPFKTREGREITGPWQSHPKRMLRHKAMIQCARLAFGFAGIYDKDEAERIVENTAYTAERQPERDITPVNDETMQEINTLLIALDKTWDDDLLPLCSQIFRRDIRASSELTQAEAMKALGFLKQKASEQKVAV
5982..6662                         PHAGE_Escher_SH2026Stx1_NC_049919: hypothetical protein; AML22_RS00070; phage(gi100009)     2.86e-169           EscherichiacoliMTPDIILQRTGIDVRAVEQGDDAWHKLRLGVITASEVHNVIAKPRSGKKWPDMKMSYFHTLLAEVCTGVAPEVNAKALAWGIQYENDARALFEFTSGVNVTESPIIYRDESMRTACSPDGLCSDGNGLELKCPFTSRDFMKFRLGGFEAIKSAYMAQVQYSMWVTRKDAWYFANYDPRMKREGLHYVVVERDENYMASFDEMVPEFIEKMDEALAEIGFVFGEQWR
6659..6841                         PHAGE_Entero_DE3_NC_042057: hypothetical protein; AML22_RS00075; phage(gi100011)     5.93e-37            EscherichiacoliMTHPHDNIRVGAITFVYSVTKRGWVFPGLSVIQNPLKAQRLAEEINNKREAICTKHLLLS
6814..7005                         PHAGE_Escher_PA28_NC_041935: hypothetical protein; AML22_RS00080; phage(gi100018)     5.26e-37            EscherichiacoliMHKASPVELRTSIEMAHSLAQIGVRFVPIPVETDEEFHTLATSLSQKLEMMVAKAEADERDLV
7082..7297                         PHAGE_Stx2_c_Stx2a_F451_NC_049924: hypothetical protein; AML22_RS00090; phage(gi100017)     2.29e-47            EscherichiacoliMTPQQENALRSIARQANSEIKKARQQFPDKNVDDICRSVLKKHRETVTLMGFTPTHLSLAIGMLNGVFKER
7396..7617                         PHAGE_Stx2_c_Stx2a_F451_NC_049924: hypothetical protein; AML22_RS00095; phage(gi100016)     3.98e-46            EscherichiacoliMADIIDSASEIEELQRNTAIKMRRLNHQAISATHCCECGDPIDERRRLAVQGCRTCASCQEDLELISKQRGSK
complement(7828..8430)             hypothetical protein; AML22_RS00100                                                  N/A                 EscherichiacoliMSYFLRKKWMVNLSGAGKILWALNMKKDSYPYLICMTVSGLIFIFLFFWWRADIYRVTFLNQSISHYYILFSMGIAFLLSLFWVKKGIVKQSGWKSLSAYLKVYAGMCIFAGFFLIIPLTTLTYFLPGETSSYVAPYRYTSGSSKSCSGAEVDDPDLHENIRICYPYGNYEYDNIIYVEKKINTLGAVVTYAQTARDDTE
8673..8840                         PHAGE_Entero_DE3_NC_042057: hypothetical protein; AML22_RS00105; phage(gi100006)     1.96e-34            EscherichiacoliMHFRVTGEWNGEPFNRVIEAENINDCYDHWMIWAQIAHADITNIRIEELKEHQAA
8880..9098                         PHAGE_Entero_DE3_NC_042057: hypothetical protein; AML22_RS00110; phage(gi100005)     2.54e-46            EscherichiacoliMYLTLQEWNARQRRPRSLETVRRWVRECRIFPPPVKDGREYLFHESAVKVDLNRPVTGSLLKRIRNGKKAKS
9076..10146                        PHAGE_Entero_HK106_NC_019768: integrase; AML22_RS00115; phage(gi428783305)           0.0                 EscherichiacoliMGRRRSHERRDLPPNLYIRNNGYYCYRDPRTGKEFGLGRDRRIAITEAIQANIELFSGHKHKPLTARINSDNSVTLHSWLDRYEKILASRGIKQKTLINYMSKIKAIRRGLPDAPLEDITTKEIAAMLNGYIDEGKAASAKLIRSTLSDAFREAIAEGHITTNPVAATRAAKSEVRRSRLTADEYLKIYQAAESSPCWLRLAMELAVVTGQRVGDLCEMKWSDIVDGYLYVEQSKTGVKIAIPTTLHVDALGISMKETLDKCKEILGGETIIASTRREPLSSGTVSRYFMRARKASGLSFEGDPPTFHELRSLSARLYEKQISDKFAQHLLGHKSDTMASQYRDDRGREWDKIEIK
10718..10730                       attR                                                                                 N/A                 TGTGAAGATTGGG

#### region 2 ####
454223..454234                     attL                                                                                 N/A                 ATCTCCCTGACA
466650..466808                     PHAGE_Entero_SfI_NC_027339: phage integrase family site-specific recombinase; AML22_RS29315; phage(gi849250251)     2.07e-22            EscherichiacoliKMSGETLEMVRRYAHLAPNHLTEHARIDSILNPSVPNLSQSKNKEGINDV
complement(467025..467718)         PHAGE_Entero_P1_NC_005856: InsA; AML22_RS27755; phage(gi46401643)                    1.32e-11            EscherichiacoliMATVTVHRPRCNSDKVYRHGRSCSQHERFRCRSCKRVFQLTYSYEARKPGFKELIVEMAHNGTGAVISPEHKSASIPSYGHKALAPADNICVSQLTLMLPLSVNLMSCGASLATRRNNTGSGMRRTLKLAVCWLTLSGHGMMRPVGNCPCLRSVSAWWPRLGQLRQRSAEGEIPDRQNLHATYTQPDPPHPHQAAGKNNLLLAFRNPRKSHRFLHKAHVLLA
468311..472441                     PROPHAGE_Escher_CFT073: Pic serine protease precursor; AML22_RS02360; phage(gi26246250)     0.0                 EscherichiacoliMNKIYALKYCYITNTVKVVSELARRVCKGSTRRGKRLSVLTSLALSALLPTVAGASTVGGNNPYQTYRDFAENKGQFQAGATNIPIFNNKGELVGHLDKAPMVDFSSVNVSSNPGVATLINPQYIASVKHNKGYQSVSFGDGQNSYHIVDRNEHSSSDLHTPRLDKLVTEVAPATVTSSSTADILNPSKYSAFYRAGSGSQYIQDSQGKRHWVTGGYGYLTGGILPTSFFYHGSDGIQLYMGGNIHDHSILPSFGEAGDSGSPLFGWNTAKGQWELVGVYSGVGGGTNLIYSLIPQSFLSQIYSEDNDAPVFFNASSGAPLQWKFDSSTGTGSLKQGSDEYAMHGQKGSDLNAGKNLTFLGHNGQIDLENSVTQGAGSLTFTDDYTVTTSNGSTWTGAGIIVDKDASVNWQVNGVKGDNLHKIGEGTLVVQGTGVNEGGLKVGDGTVVLNQQADSSGHVQAFSSVNIASGRPTVVLADNQQVNPDNISWGYRGGVLDVNGNDLTFHKLNAADYGATLGNSSDKTANITLDYQTHPADVKVNEWSSSNRGTVGSLYIYNNPYTHTVDYFILKTSSYGWFPTGQVSNEHWEYVGHDQNSAQALLANRINNKGYLYHGKLLGNINFSNKATPGTTGALVMDGSANMSGTFTQENGRLTIQGHPVIHASTSQSIANTVSSLGDNSVLTQPTSFTQDDWENRTFSFGSLVLKDTDFGLGRNATLNTTIQADNSSVTLGDSRVFIDKKDGQGTAFTLEEGTSVATKDADKSVFNGTVNLDNQSVLNINEIFNGGIQANNSTVNISSDSAVLENSTLTSTALNLNKGANVLASQSFVSDGPVNISDATLSLNSRPDEVSHTLLPVYDYAGSWNLKGDDARLNVGPYSMLSGNINVQDKGTVTLGGEGELSPDLTLQNLMLYSLFNGYRNTWSGSLNAPDATVSMTDTQWSMNGNSTAGNMKLNRTIVGFNGGTSSFTTLTTDNLDAVQSAFVMRTDLNKADKLVINKSATGHDNSIWVNFLKKPSDKDTLDIPLVSAPEATADNLFRASTRVVGFSDVTPTLSVRKEDGKKEWVLDGYQVARNDGQGKAAATFMHISYNNFITEVNNLNKRMGDLRDINGEAGTWVRLLNGSGSADGGFTDHYTLLQMGADRKHELGSMDLFTGVMATYTDTDASAGLYSGKTKSWGGGFYASGLFRSGAYFDLIAKYIHNENKYDLNFAGAGKQNFRSHSLYAGAEVGYRYHLTDTTFVEPQAELVWGRLQGQTFNWNDSGMDVSMRRNSVNPLVGRTGVVSGKTFSGKDWSLTARAGLHYEFDLTDSADVHLKDAAGEHQINGRKDGRMLYGVGLNARFGDNTRLGLEVERSAFGKYNTDDAINANIRYSF
472597..473091                     MarR family transcriptional regulator; AML22_RS02365                                 N/A                 EscherichiacoliMNNIDLLKTITNYKKIKNPAYPAQESLLIHLYIRVNDKIQSIIENELSEYRINTSTFMVLVSLYMSDDYCQSPSDIYKELQFSKTNITHIIDKLEKKNIAKRINNKNDRRSKSICLTPDGVTLAQKLINTQNVMLKKIWSGLSDDEMKTFELANKKLLSNLNVN
complement(473546..473884)         PROPHAGE_Escher_CFT073: putative prophage integrase; AML22_RS02370; phage(gi26250313)     3.99e-37            EscherichiacoliMKLNARQIDTAKPKEKAYKLADGGGLYLLVKPGGGEYWRLKYRVAGKEKLLALGVYPEVTLADAPAKLEEAKRGISGGIDLMEVKREEKIARETQLNNTFKDIALEWHSNKL
474551..474994                     PHAGE_Pseudo_PaMx11_NC_028770: putative acetyltransferase; AML22_RS02380; phage(gi971741816)     1.45e-11            EscherichiacoliMLDIRMSRPSEADEIIQIWKSSVDATHDFLTGHDRQEIEKEVVGFFSETPVWVATNQDDQPLGFMFLHKGHLEALFVAGSARGLGVGKRLISHALALHPELSVDVNEQNQQAVGFYQHMGFKVSGRSDLDNQGRPYPLLHLRMANNM
complement(475015..475599)         PHAGE_Thermo_THSA_485A_NC_018264: transcriptional regulator, XRE family; AML22_RS02385; phage(gi397912660)     2.85e-07            EscherichiacoliMDKKSKNQIVDSDIARLLLKHRKARNLTVTELAQRSGVSQAMISKIERGISSPSATILSRLANAMNVTLSKLFAELEQHQNSLVRFAHQQQHWTDEQSGITRWSLSPAGACPELIKVEIPAMGELTIPASANEHLSGQTLWVMSGSLDFRVKNQTHHLRAGDCLALTFASEYQMSNPDSEQSCSYIVAFSQKNQ
476130..476903                     PHAGE_Serrat_2050HW_NC_048668: baseplate hub protein; AML22_RS02390; phage(gi100277)     2.93e-62            EscherichiacoliMDITEFPSGVIEHLGWYVYRLIDPRDGSTFYVGKGKGNRVFAHMRGEVAAADDDELLSNKLKQIREIRLAGLEVIHVIHRHGMTDEKTAYEVEAALIDAYPGLTNIMNGAGSNEFGAAHVKELIATYQPETITFHHKALMISVNRSAKDSELYDAVRFSWRINVSRASQAEVILATVRGIVRGVFIADKWLKSTRENFPTMKYWDEDPDFEATQSSRYGFEGREAPPEIANLYLGKKIPDELRKKGAMSPVRYSPNF
complement(476961..477515)         PHAGE_Escher_pro483_NC_028943: DNA invertase; AML22_RS02395; phage(gi971758535)      1.25e-115           EscherichiacoliMLIGYVRVSTNDQNTDLQRNALNCAGCELIFEDKISGTKSERPGLKKLLRTLSAGDTLVVWKLDRLGRSMRHLVILVEELRERGINFRSLTDSIDTSTPMGRFFFHVMGALAEMERELIVERTKAGLEAARAQGRIGGRRPKLTPEQWAQAGRLIASGVPRQKVAIIYDVGISTLYKKFPVGDK
477521..477532                     attR                                                                                 N/A                 ATCTCCCTGACA
