Criteria for scoring prophage regions (as intact, questionable, or incomplete):
Method 1:
1. If the number of certain phage organism in this table is more than or equal to 100% of the total number of CDS of the region,
   the region is marked with total score 150. If less than 100%, method 2 and 3 will be used.

Method 2:
1. If the number of certain phage organism in this table  is more than 50% of the total number of CDS of the region, that phage 
   organism is considered as the major potential phage for that region; the percentage of the total number
   of that phage organism in this table in the  total number of proteins of the region is calculated and 
   then multipled by 100; the percentage of the length of that phage organism in this table in the length 
   of the region is calculated and then multipled by 50 (phage head's encapsulation capability is considered).

Method 3:
1. If any of the specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber',
   'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin') are present, the score will be increased 
   by 10 for each keyword found.
2. If the size of the region is greater than 30 Kb, the score will be increased by 10.
3. If there are at least 40 proteins in the region, the score will be increased by 10.
4. If all of the phage-related proteins and hypothetical proteins constitute more than 70% of
   the total number of proteins in the region, the score will be increased by 10.

Compared the total score of method 2 with the total score of method 3, the bigger one is chosen as the total score of the region.
If the region's total score is less than 70, it is marked as incomplete; if between 70 to 90, it is marked as questionable; if greater than 90, it is marked as intact.
   


Totally 9 intact prophage regions have been identified.




                                  REGION         REGION_LENGTH            COMPLETENESS(score)           SPECIFIC_KEYWORD                             REGION_POSITION          TRNA_NUM                 TOTAL_PROTEIN_NUM       PHAGE_HIT_PROTEIN_NUM            HYPOTHETICAL_PROTEIN_NUM         PHAGE+HYPO_PROTEIN_PERCENTAGE    BACTERIAL_PROTEIN_NUM            ATT_SITE_SHOWUP                  PHAGE_SPECIES_NUM                MOST_COMMON_PHAGE_NAME(hit_genes_count)    FIRST_MOST_COMMON_PHAGE_NUM      FIRST_MOST_COMMON_PHAGE_PERCENTAGE   GC_PERCENTAGE                 
                                 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
                                  1              21.3Kb                   intact(120)                   portal,terminase,capsid,recombinase,tail     328030-349354            2                        45                      40                               2                                93.3%                            3                                no                               19                               PHAGE_Entero_lambda_NC_001416(11),PHAGE_Entero_933W_NC_000924(11),PHAGE_Stx2_II_NC_004914(9),PHAGE_Stx2_vB_EcoP_24B_NC_027984(9),PHAGE_Entero_Min27_NC_010237(9),PHAGE_Entero_VT2_Sakai_NC_000902(8),PHAGE_Stx2_c_86_NC_008464(8),PHAGE_Entero_BP_4795_NC_004813(7),PHAGE_Stx2_c_1717_NC_011357(7),PHAGE_Entero_HK630_NC_019723(7),PHAGE_Entero_SfI_NC_027339(6),PHAGE_Entero_HK629_NC_019711(5),PHAGE_Escher_phage_NC_004913(4),PHAGE_Entero_c_1_NC_019706(4),PHAGE_Entero_P88_NC_026014(3),PHAGE_Entero_HK106_NC_019768(3),PHAGE_Entero_HK140_NC_019710(3),PHAGE_Entero_mEp234_NC_019715(2),PHAGE_Salmon_SPN3UB_NC_019545(2),PHAGE_Salmon_SEN4_NC_029015(2),PHAGE_Shigel_POCJ13_NC_025434(2),PHAGE_Entero_N15_NC_001901(2),PHAGE_Entero_mEp213_NC_019720(2),PHAGE_Escher_Pollock_NC_027381(2),PHAGE_Entero_mEp460_NC_019716(2),PHAGE_Entero_cdtI_NC_009514(2),PHAGE_Salmon_SP_058_NC_021772(2),PHAGE_Entero_mEp237_NC_019704(2),PHAGE_Entero_phiP27_NC_003356(2),PHAGE_Salmon_SEN1_NC_029003(2),PHAGE_Salmon_SEN5_NC_028701(2),PHAGE_Salmon_ST160_NC_014900(2),PHAGE_Shigel_Stx_NC_029120(2),PHAGE_Entero_P22_NC_002371(1),PHAGE_Salmon_SP_076_NC_021782(1),PHAGE_Salmon_103203_sal5_NC_031946(1),PHAGE_Entero_mEp235_NC_019708(1),PHAGE_Erwini_vB_EamM_Caitlin_NC_031120(1),PHAGE_Entero_SfV_NC_003444(1),PHAGE_Entero_HK542_NC_019769(1),PHAGE_Entero_PsP3_NC_005340(1),PHAGE_Escher_HK75_NC_016160(1),PHAGE_Phage_Gifsy_2_NC_010393(1),PHAGE_Ralsto_RSY1_NC_025115(1),PHAGE_Erwini_vB_EamM_ChrisDB_NC_031126(1),PHAGE_Salmon_HK620_NC_002730(1),PHAGE_Burkho_KS5_NC_015265(1),PHAGE_Burkho_phiE12_2_NC_009236(1),PHAGE_Entero_YYZ_2008_NC_011356(1),PHAGE_Entero_186_NC_001317(1),PHAGE_Shigel_SfII_NC_021857(1),PHAGE_Salmon_SPN1S_NC_016761(1),PHAGE_Salmon_SJ46_NC_031129(1),PHAGE_Burkho_phiE202_NC_009234(1),PHAGE_Salmon_SP_004_NC_021774(1),PHAGE_Shigel_SfIV_NC_022749(1),PHAGE_Erwini_vB_EamM_Asesino_NC_031107(1),PHAGE_Salmon_118970_sal4_NC_030919(1),PHAGE_Entero_HK022_NC_002166(1),PHAGE_Entero_mEp390_NC_019721(1),PHAGE_Salmon_7_11_NC_015938(1),PHAGE_Entero_HK633_NC_019719(1),PHAGE_Entero_P1_NC_005856(1),PHAGE_Plankt_PaV_LD_NC_016564(1),PHAGE_Entero_ST104_NC_005841(1),PHAGE_Entero_UAB_Phi20_NC_031019(1),PHAGE_Salmon_SEN22_NC_028696(1),PHAGE_Escher_phi191_NC_028660(1),PHAGE_Escher_P13374_NC_018846(1)   12                               24.44%                           47.57%                        
                                  2              23.6Kb                   incomplete(50)                tail                                         511286-534903            1                        29                      21                               5                                89.6%                            3                                no                               16                               PHAGE_Phage_Gifsy_2_NC_010393(3),PHAGE_Escher_TL_2011b_NC_019445(2),PHAGE_Entero_BP_4795_NC_004813(2),PHAGE_Salmon_Fels_1_NC_010391(2),PHAGE_Pectob_ZF40_NC_019522(2),PHAGE_Cronob_phiES15_NC_018454(2),PHAGE_Stx2_c_1717_NC_011357(2),PHAGE_Entero_mEp237_NC_019704(2),PHAGE_Salmon_SPN3UB_NC_019545(2),PHAGE_Shigel_POCJ13_NC_025434(2),PHAGE_Burkho_KL3_NC_015266(2),PHAGE_Entero_YYZ_2008_NC_011356(2),PHAGE_Entero_UAB_Phi20_NC_031019(2),PHAGE_Entero_ES18_NC_006949(2),PHAGE_Shigel_Stx_NC_029120(2),PHAGE_Entero_P22_NC_002371(1),PHAGE_Entero_Tyrion_NC_031077(1),PHAGE_Escher_HK639_NC_016158(1),PHAGE_Escher_D108_NC_013594(1),PHAGE_Citrob_Miller_NC_025414(1),PHAGE_Entero_Min27_NC_010237(1),PHAGE_Shigel_SfIV_NC_022749(1),PHAGE_Entero_Mu_NC_000929(1),PHAGE_Entero_lambda_NC_001416(1),PHAGE_Entero_RB43_NC_007023(1),PHAGE_Entero_mEp390_NC_019721(1),PHAGE_Klebsi_vB_KpnM_KpV477_NC_031087(1),PHAGE_Entero_phi80_NC_021190(1),PHAGE_Klebsi_PKO111_NC_031095(1),PHAGE_Phage_Gifsy_1_NC_010392(1),PHAGE_Pseudo_OBP_NC_016571(1),PHAGE_Entero_RB16_NC_014467(1),PHAGE_Salico_CGphi29_NC_020844(1),PHAGE_Entero_HK225_NC_019717(1),PHAGE_Entero_P1_NC_005856(1),PHAGE_Entero_933W_NC_000924(1),PHAGE_Escher_phiV10_NC_007804(1),PHAGE_Stx2_II_NC_004914(1),PHAGE_Salmon_118970_sal3_NC_031940(1),PHAGE_Citrob_vB_CfrM_CfP1_NC_031057(1),PHAGE_Entero_mEp460_NC_019716(1),PHAGE_Yersin_PY54_NC_005069(1),PHAGE_Entero_cdtI_NC_009514(1),PHAGE_Shigel_SfII_NC_021857(1),PHAGE_Burkho_Bcep176_NC_007497(1),PHAGE_Salmon_Fels_2_NC_010463(1),PHAGE_Entero_VT2_Sakai_NC_000902(1),PHAGE_Entero_HK630_NC_019723(1),PHAGE_Staphy_StauST398_5_NC_023500(1),PHAGE_Escher_phage_NC_004913(1),PHAGE_Escher_pro483_NC_028943(1)   3                                10.34%                           49.70%                        
                                  3              38.5Kb                   intact(100)                   tail,integrase                               575236-613761            0                        22                      16                               3                                86.3%                            3                                yes                              8                                PHAGE_Entero_BP_4795_NC_004813(5),PHAGE_Entero_cdtI_NC_009514(5),PHAGE_Stx2_c_1717_NC_011357(5),PHAGE_Entero_YYZ_2008_NC_011356(4),PHAGE_Entero_lambda_NC_001416(3),PHAGE_Entero_mEp460_NC_019716(3),PHAGE_Entero_SfV_NC_003444(2),PHAGE_Entero_phiP27_NC_003356(2),PHAGE_Entero_P1_NC_005856(1),PHAGE_Phage_Gifsy_2_NC_010393(1),PHAGE_Entero_933W_NC_000924(1),PHAGE_Stx2_vB_EcoP_24B_NC_027984(1),PHAGE_Erwini_phiEt88_NC_015295(1),PHAGE_Entero_Min27_NC_010237(1),PHAGE_Escher_PA2_NC_028449(1),PHAGE_Entero_mEp235_NC_019708(1),PHAGE_Klebsi_phiKO2_NC_005857(1),PHAGE_Entero_HK022_NC_002166(1),PHAGE_Stx2_II_NC_004914(1),PHAGE_Escher_TL_2011c_NC_019442(1),PHAGE_Salmon_Fels_1_NC_010391(1),PHAGE_Pectob_ZF40_NC_019522(1),PHAGE_Salmon_SEN22_NC_028696(1),PHAGE_Escher_phi191_NC_028660(1),PHAGE_Entero_VT2_Sakai_NC_000902(1),PHAGE_Entero_HK630_NC_019723(1),PHAGE_Entero_mEp237_NC_019704(1),PHAGE_Escher_P13374_NC_018846(1),PHAGE_Salmon_SPN3UB_NC_019545(1),PHAGE_Entero_HK225_NC_019717(1),PHAGE_Escher_phage_NC_004913(1)   7                                22.72%                           49.64%                        
                                  4              29.2Kb                   intact(150)                   tail,terminase,head,capsid,transposase       721554-750779            0                        47                      33                               6                                82.9%                            8                                no                               13                               PHAGE_Entero_lambda_NC_001416(9),PHAGE_Entero_BP_4795_NC_004813(9),PHAGE_Entero_HK629_NC_019711(8),PHAGE_Entero_HK630_NC_019723(8),PHAGE_Stx2_c_1717_NC_011357(7),PHAGE_Phage_Gifsy_1_NC_010392(6),PHAGE_Entero_HK225_NC_019717(6),PHAGE_Entero_N15_NC_001901(6),PHAGE_Entero_mEp237_NC_019704(5),PHAGE_Entero_YYZ_2008_NC_011356(5),PHAGE_Entero_cdtI_NC_009514(4),PHAGE_Escher_PA2_NC_028449(3),PHAGE_Entero_phi80_NC_021190(3),PHAGE_Stx2_c_86_NC_008464(3),PHAGE_Escher_TL_2011c_NC_019442(3),PHAGE_Entero_mEp460_NC_019716(3),PHAGE_Stx2_vB_EcoP_24B_NC_027984(2),PHAGE_Microc_MaMV_DC_NC_029002(2),PHAGE_Entero_VT2phi_272_NC_028656(2),PHAGE_Entero_933W_NC_000924(2),PHAGE_Escher_Pollock_NC_027381(2),PHAGE_Shigel_Stx_NC_029120(2),PHAGE_Salmon_SP_076_NC_021782(1),PHAGE_Entero_Min27_NC_010237(1),PHAGE_Vibrio_12B8_NC_021073(1),PHAGE_Haemop_Aaphi23_NC_004827(1),PHAGE_Pseudo_MD8_NC_031091(1),PHAGE_Salmon_Fels_1_NC_010391(1),PHAGE_Staphy_vB_SauM_Remus_NC_022090(1),PHAGE_Salmon_SP_058_NC_021772(1),PHAGE_Shigel_POCJ13_NC_025434(1),PHAGE_Entero_P1_NC_005856(1),PHAGE_Staphy_vB_SauM_Romulus_NC_020877(1),PHAGE_Stx2_II_NC_004914(1),PHAGE_Entero_VT2_Sakai_NC_000902(1),PHAGE_Lister_LMSP_25_NC_024360(1),PHAGE_Aggreg_S1249_NC_013597(1),PHAGE_Salmon_SJ46_NC_031129(1)   12                               19.14%                           52.22%                        
                                  5              8.9Kb                    incomplete(40)                tail,fiber                                   952205-961132            0                        18                      13                               3                                88.8%                            2                                no                               7                                PHAGE_Entero_lambda_NC_001416(6),PHAGE_Entero_BP_4795_NC_004813(6),PHAGE_Stx2_c_1717_NC_011357(4),PHAGE_Stx2_II_NC_004914(4),PHAGE_Entero_VT2_Sakai_NC_000902(4),PHAGE_Entero_HK630_NC_019723(4),PHAGE_Entero_mEp237_NC_019704(3),PHAGE_Entero_HK225_NC_019717(3),PHAGE_Stx2_vB_EcoP_24B_NC_027984(2),PHAGE_Shigel_POCJ13_NC_025434(2),PHAGE_Entero_YYZ_2008_NC_011356(2),PHAGE_Entero_mEp460_NC_019716(2),PHAGE_Entero_cdtI_NC_009514(2),PHAGE_Shigel_Stx_NC_029120(2),PHAGE_Erwini_phiEt88_NC_015295(1),PHAGE_Shigel_SfIV_NC_022749(1),PHAGE_Entero_HK106_NC_019768(1),PHAGE_Entero_HK022_NC_002166(1),PHAGE_Entero_SfV_NC_003444(1),PHAGE_Entero_phi80_NC_021190(1),PHAGE_Entero_HK629_NC_019711(1),PHAGE_Entero_HK542_NC_019769(1),PHAGE_Entero_HK140_NC_019710(1),PHAGE_Salmon_SPN3UB_NC_019545(1),PHAGE_Entero_N15_NC_001901(1),PHAGE_Entero_HK97_NC_002167(1),PHAGE_Entero_c_1_NC_019706(1),PHAGE_Entero_933W_NC_000924(1),PHAGE_Stx2_c_86_NC_008464(1),PHAGE_Shigel_SfII_NC_021857(1),PHAGE_Salmon_SEN22_NC_028696(1),PHAGE_Escher_phage_NC_004913(1)   6                                33.33%                           50.31%                        
                                  6              17Kb                     questionable(80)              integrase,capsid,head,portal,terminase       2601094-2618131          0                        28                      15                               12                               96.4%                            1                                yes                              14                               PHAGE_Salmon_118970_sal3_NC_031940(4),PHAGE_Salmon_ST64B_NC_004313(3),PHAGE_Geobac_E2_NC_009552(3),PHAGE_Shigel_SfII_NC_021857(3),PHAGE_Entero_P4_NC_001609(2),PHAGE_Shigel_SfIV_NC_022749(2),PHAGE_Psychr_Psymv2_NC_023734(2),PHAGE_Entero_EFRM31_NC_015270(1),PHAGE_Acinet_Acj61_NC_014661(1),PHAGE_Bacill_WBeta_NC_007734(1),PHAGE_Entero_HK446_NC_019714(1),PHAGE_Salmon_SP_076_NC_021782(1),PHAGE_Bacill_Fah_NC_007814(1),PHAGE_Xantho_Xp10_NC_004902(1),PHAGE_Xantho_phiL7_NC_012742(1),PHAGE_Staphy_StB20_like_NC_028821(1),PHAGE_Bacill_Pascal_NC_027372(1),PHAGE_Entero_mEpX1_NC_019709(1),PHAGE_Entero_SfV_NC_003444(1),PHAGE_Entero_phi80_NC_021190(1),PHAGE_Entero_HK544_NC_019767(1),PHAGE_Entero_SANTOR1_NC_031051(1),PHAGE_Entero_EFAP_1_NC_012419(1),PHAGE_Entero_HK542_NC_019769(1),PHAGE_Strept_TP1604_NC_028818(1),PHAGE_Salmon_vB_SosS_Oslo_NC_018279(1),PHAGE_Salmon_SP_058_NC_021772(1),PHAGE_Entero_IME_EF4_NC_023551(1),PHAGE_Entero_mEp237_NC_019704(1),PHAGE_Escher_HK75_NC_016160(1),PHAGE_Entero_HK225_NC_019717(1),PHAGE_Brucel_BiPBO1_NC_031264(1),PHAGE_Acinet_ZZ1_NC_018087(1),PHAGE_Burkho_KL3_NC_015266(1),PHAGE_Acinet_Acj9_NC_014663(1),PHAGE_Entero_HK97_NC_002167(1),PHAGE_Pseudo_PAJU2_NC_011373(1),PHAGE_Entero_P1_NC_005856(1),PHAGE_Strept_YDN12_NC_028974(1),PHAGE_Entero_EfaCPT1_NC_025465(1),PHAGE_Stenot_S1_NC_011589(1),PHAGE_Bacill_phi105_NC_004167(1),PHAGE_Strept_9874_NC_031023(1),PHAGE_Escher_Pollock_NC_027381(1),PHAGE_Staphy_StB27_NC_019914(1),PHAGE_Burkho_phi1026b_NC_005284(1),PHAGE_Strept_phiSAJS1_NC_029005(1),PHAGE_Staphy_Ipla88_NC_011614(1)   2                                14.28%                           50.13%                        
                                  7              12.5Kb                   incomplete(30)                integrase                                    2634207-2646781          0                        23                      17                               5                                95.6%                            1                                no                               6                                PHAGE_Entero_P88_NC_026014(12),PHAGE_Salmon_SEN5_NC_028701(3),PHAGE_Escher_pro147_NC_028896(2),PHAGE_Entero_YYZ_2008_NC_011356(2),PHAGE_Entero_BP_4795_NC_004813(2),PHAGE_Salmon_Fels_1_NC_010391(2),PHAGE_Salmon_SEN4_NC_029015(2),PHAGE_Escher_pro483_NC_028943(2),PHAGE_Escher_Av_05_NC_025830(1),PHAGE_Entero_c_1_NC_019706(1),PHAGE_Salmon_RE_2010_NC_019488(1),PHAGE_Phage_Gifsy_2_NC_010393(1),PHAGE_Serrat_Eta_NC_021563(1),PHAGE_Entero_mEp213_NC_019720(1),PHAGE_Shigel_Ss_VASD_NC_028685(1),PHAGE_Yersin_L_413C_NC_004745(1),PHAGE_Entero_WPhi_NC_005056(1),PHAGE_Prochl_P_TIM68_NC_028955(1),PHAGE_Salmon_Fels_2_NC_010463(1),PHAGE_Bacill_SPbeta_NC_001884(1),PHAGE_Escher_phi191_NC_028660(1),PHAGE_Synech_S_SM2_NC_015279(1),PHAGE_Entero_P2_NC_001895(1),PHAGE_Entero_phiP27_NC_003356(1),PHAGE_Entero_fiAA91_ss_NC_022750(1)   12                               52.17%                           47.44%                        
                                  8              18.1Kb                   intact(110)                   tail                                         2809097-2827230          0                        33                      28                               3                                93.9%                            2                                no                               12                               PHAGE_Entero_lambda_NC_001416(8),PHAGE_Entero_Sf101_NC_027398(8),PHAGE_Entero_SfI_NC_027339(8),PHAGE_Entero_HK446_NC_019714(6),PHAGE_Shigel_Sf6_NC_005344(5),PHAGE_Stx2_c_1717_NC_011357(5),PHAGE_Entero_BP_4795_NC_004813(4),PHAGE_Entero_HK140_NC_019710(4),PHAGE_Stx2_II_NC_004914(4),PHAGE_Entero_P88_NC_026014(4),PHAGE_Entero_VT2_Sakai_NC_000902(4),PHAGE_Salmon_SEN4_NC_029015(3),PHAGE_Entero_HK633_NC_019719(3),PHAGE_Entero_933W_NC_000924(3),PHAGE_Entero_mEp213_NC_019720(3),PHAGE_Salmon_SEN5_NC_028701(3),PHAGE_Stx2_vB_EcoP_24B_NC_027984(2),PHAGE_Entero_HK544_NC_019767(2),PHAGE_Entero_mEp234_NC_019715(2),PHAGE_Phage_Gifsy_1_NC_010392(2),PHAGE_Stx2_c_86_NC_008464(2),PHAGE_Burkho_KS14_NC_015273(2),PHAGE_Salmon_SP_004_NC_021774(1),PHAGE_Klebsi_phiKO2_NC_005857(1),PHAGE_Entero_HK106_NC_019768(1),PHAGE_Entero_mEpX1_NC_019709(1),PHAGE_Entero_WPhi_NC_005056(1),PHAGE_Entero_HK542_NC_019769(1),PHAGE_Cronob_phiES15_NC_018454(1),PHAGE_Entero_mEp237_NC_019704(1),PHAGE_Entero_PsP3_NC_005340(1),PHAGE_Escher_HK75_NC_016160(1),PHAGE_Entero_N15_NC_001901(1),PHAGE_Entero_c_1_NC_019706(1),PHAGE_Salmon_vB_SemP_Emek_NC_018275(1),PHAGE_Salmon_RE_2010_NC_019488(1),PHAGE_Escher_pro147_NC_028896(1),PHAGE_Salmon_HK620_NC_002730(1),PHAGE_Entero_YYZ_2008_NC_011356(1),PHAGE_Entero_186_NC_001317(1),PHAGE_Yersin_PY54_NC_005069(1),PHAGE_Entero_UAB_Phi20_NC_031019(1),PHAGE_Escher_phi191_NC_028660(1),PHAGE_Entero_mEpX2_NC_019705(1),PHAGE_Entero_HK630_NC_019723(1),PHAGE_Entero_P2_NC_001895(1),PHAGE_Escher_phage_NC_004913(1),PHAGE_Escher_pro483_NC_028943(1)   8                                24.24%                           47.28%                        
                                  9              28Kb                     incomplete(20)                lysin                                        3017990-3046065          0                        23                      13                               4                                73.9%                            6                                yes                              9                                PHAGE_Salmon_118970_sal3_NC_031940(4),PHAGE_Shigel_POCJ13_NC_025434(4),PHAGE_Shigel_Stx_NC_029120(4),PHAGE_Phage_Gifsy_2_NC_010393(3),PHAGE_Phage_Gifsy_1_NC_010392(3),PHAGE_Entero_mEp237_NC_019704(3),PHAGE_Salmon_SPN3UB_NC_019545(3),PHAGE_Salmon_ST64B_NC_004313(2),PHAGE_Escher_HK639_NC_016158(1),PHAGE_Entero_933W_NC_000924(1),PHAGE_Escher_PA2_NC_028449(1),PHAGE_Entero_Min27_NC_010237(1),PHAGE_Shigel_Ss_VASD_NC_028685(1),PHAGE_Podovi_Lau218_NC_024329(1),PHAGE_Stx2_II_NC_004914(1),PHAGE_Entero_SfV_NC_003444(1),PHAGE_Escher_TL_2011c_NC_019442(1),PHAGE_Entero_VT2phi_272_NC_028656(1),PHAGE_Entero_cdtI_NC_009514(1),PHAGE_Pectob_ZF40_NC_019522(1),PHAGE_Entero_VT2_Sakai_NC_000902(1),PHAGE_Escher_P13374_NC_018846(1),PHAGE_Entero_phiP27_NC_003356(1),PHAGE_Salico_CGphi29_NC_020844(1),PHAGE_Salmon_SEN34_NC_028699(1),PHAGE_Entero_HK225_NC_019717(1),PHAGE_Escher_phage_NC_004913(1),PHAGE_Pseudo_PS_1_NC_029066(1)   3                                17.39%                           48.25%                        
                                  10             13.6Kb                   incomplete(30)                tail,transposase                             3506595-3520246          0                        9                       8                                0                                88.8%                            1                                no                               5                                PHAGE_Entero_P88_NC_026014(3),PHAGE_Salmon_RE_2010_NC_019488(2),PHAGE_Salmon_SEN5_NC_028701(2),PHAGE_Salmon_Fels_2_NC_010463(2),PHAGE_Bacill_G_NC_023719(2),PHAGE_Salmon_SEN4_NC_029015(2),PHAGE_Mycoba_Minerva_NC_026584(1),PHAGE_Bacill_SP_15_NC_031245(1),PHAGE_Escher_PA2_NC_028449(1),PHAGE_Vibrio_vB_VpaS_MAR10_NC_019713(1),PHAGE_Pectob_My1_NC_018837(1),PHAGE_Entero_DT57C_NC_027356(1),PHAGE_Vibrio_3_NC_028895(1),PHAGE_Mycoba_Ariel_NC_028876(1),PHAGE_Mycoba_MiaZeal_NC_028953(1),PHAGE_Entero_VT2phi_272_NC_028656(1),PHAGE_Clostr_phiCTP1_NC_014457(1),PHAGE_Vibrio_pVp_1_NC_019529(1),PHAGE_Mycoba_Courthouse_NC_023690(1),PHAGE_Mycoba_Wanda_NC_022067(1),PHAGE_Escher_phi191_NC_028660(1),PHAGE_Stx2_c_1717_NC_011357(1),PHAGE_Escher_P13374_NC_018846(1),PHAGE_Vibrio_SIO_2_NC_016567(1)   3                                33.33%                           51.68%                        
                                  11             35.7Kb                   intact(150)                   tail,plate,head,capsid,portal,terminase,lysis     3676882-3712603          0                        53                      47                               5                                98.1%                            1                                no                               13                               PHAGE_Shigel_SfII_NC_021857(32),PHAGE_Entero_SfV_NC_003444(25),PHAGE_Shigel_SfIV_NC_022749(24),PHAGE_Entero_SfI_NC_027339(22),PHAGE_Salmon_118970_sal3_NC_031940(19),PHAGE_Salmon_ST64B_NC_004313(14),PHAGE_Entero_mEp460_NC_019716(6),PHAGE_Entero_cdtI_NC_009514(6),PHAGE_Entero_phiP27_NC_003356(5),PHAGE_Cronob_phiES15_NC_018454(3),PHAGE_Entero_HK225_NC_019717(3),PHAGE_Entero_933W_NC_000924(3),PHAGE_Escher_HK639_NC_016158(2),PHAGE_Entero_Tyrion_NC_031077(2),PHAGE_Entero_mEp235_NC_019708(2),PHAGE_Entero_mEp237_NC_019704(2),PHAGE_Escher_HK75_NC_016160(2),PHAGE_Shigel_POCJ13_NC_025434(2),PHAGE_Stx2_II_NC_004914(2),PHAGE_Escher_phiV10_NC_007804(2),PHAGE_Entero_UAB_Phi20_NC_031019(2),PHAGE_Entero_VT2_Sakai_NC_000902(2),PHAGE_Entero_ES18_NC_006949(2),PHAGE_Shigel_Stx_NC_029120(2),PHAGE_Bacter_APSE_2_NC_011551(1),PHAGE_Entero_P22_NC_002371(1),PHAGE_Entero_HK446_NC_019714(1),PHAGE_Stx2_vB_EcoP_24B_NC_027984(1),PHAGE_Entero_Min27_NC_010237(1),PHAGE_Endosy_APSE_1_NC_000935(1),PHAGE_Entero_mEpX1_NC_019709(1),PHAGE_Escher_TL_2011b_NC_019445(1),PHAGE_Entero_HK629_NC_019711(1),PHAGE_Entero_phi80_NC_021190(1),PHAGE_Entero_HK544_NC_019767(1),PHAGE_Phage_Gifsy_1_NC_010392(1),PHAGE_Salmon_Fels_1_NC_010391(1),PHAGE_Entero_IME10_NC_019501(1),PHAGE_Salmon_SPN3UB_NC_019545(1),PHAGE_Salico_CGphi29_NC_020844(1),PHAGE_Pseudo_F116_NC_006552(1),PHAGE_Entero_HK97_NC_002167(1),PHAGE_Entero_c_1_NC_019706(1),PHAGE_Phage_Gifsy_2_NC_010393(1),PHAGE_Entero_Sf101_NC_027398(1),PHAGE_Stx2_c_86_NC_008464(1),PHAGE_Burkho_KS14_NC_015273(1),PHAGE_Plankt_PaV_LD_NC_016564(1),PHAGE_Burkho_Bcep176_NC_007497(1),PHAGE_Escher_phage_NC_004913(1)   32                               60.37%                           50.79%                        
                                  12             40.3Kb                   intact(150)                   lysin,lysis,envelope,terminase,head,portal,tail     4160632-4200985          0                        62                      55                               4                                95.1%                            3                                no                               21                               PHAGE_Entero_lambda_NC_001416(18),PHAGE_Entero_HK629_NC_019711(18),PHAGE_Entero_HK630_NC_019723(18),PHAGE_Entero_mEp237_NC_019704(9),PHAGE_Entero_BP_4795_NC_004813(8),PHAGE_Entero_mEp460_NC_019716(8),PHAGE_Entero_cdtI_NC_009514(8),PHAGE_Stx2_vB_EcoP_24B_NC_027984(7),PHAGE_Entero_SfV_NC_003444(6),PHAGE_Entero_HK225_NC_019717(6),PHAGE_Entero_N15_NC_001901(6),PHAGE_Entero_933W_NC_000924(6),PHAGE_Stx2_II_NC_004914(6),PHAGE_Entero_YYZ_2008_NC_011356(6),PHAGE_Shigel_SfII_NC_021857(6),PHAGE_Escher_P13374_NC_018846(6),PHAGE_Entero_phi80_NC_021190(5),PHAGE_Stx2_c_1717_NC_011357(5),PHAGE_Entero_VT2_Sakai_NC_000902(5),PHAGE_Entero_Min27_NC_010237(4),PHAGE_Entero_VT2phi_272_NC_028656(4),PHAGE_Stx2_c_86_NC_008464(4),PHAGE_Escher_phi191_NC_028660(4),PHAGE_Shigel_SfIV_NC_022749(3),PHAGE_Escher_TL_2011c_NC_019442(3),PHAGE_Escher_phage_NC_004913(3),PHAGE_Salmon_ST64B_NC_004313(2),PHAGE_Escher_PA2_NC_028449(2),PHAGE_Shigel_Ss_VASD_NC_028685(2),PHAGE_Shigel_POCJ13_NC_025434(2),PHAGE_Entero_SfI_NC_027339(2),PHAGE_Salmon_118970_sal3_NC_031940(2),PHAGE_Synech_S_SSM7_NC_015287(1),PHAGE_Aeromo_vB_AsaM_56_NC_019527(1),PHAGE_Iodoba_phiPLPE_NC_011142(1),PHAGE_Mycoba_Enkosi_NC_028936(1),PHAGE_Pseudo_phiPSA1_NC_024365(1),PHAGE_Synech_S_SM2_NC_015279(1),PHAGE_Strept_TG1_NC_018853(1),PHAGE_Entero_c_1_NC_019706(1),PHAGE_Salmon_vB_SemP_Emek_NC_018275(1),PHAGE_Entero_Sf101_NC_027398(1),PHAGE_Synech_S_CAM1_NC_020837(1),PHAGE_Entero_UAB_Phi20_NC_031019(1),PHAGE_Cronob_ENT47670_NC_019927(1),PHAGE_Salmon_SEN22_NC_028696(1),PHAGE_Shigel_Stx_NC_029120(1),PHAGE_Acinet_phiAC_1_NC_028995(1)   18                               29.03%                           51.95%                        
                                  13             60.9Kb                   intact(150)                   integrase,lysis,lysin,tail,protease,portal,terminase,capsid,head,plate,transposase     4707422-4768418          0                        78                      65                               6                                91%                              7                                yes                              17                               PHAGE_Entero_mEp460_NC_019716(17),PHAGE_Entero_cdtI_NC_009514(16),PHAGE_Entero_P88_NC_026014(15),PHAGE_Salmon_SEN5_NC_028701(11),PHAGE_Salmon_SEN4_NC_029015(9),PHAGE_Entero_c_1_NC_019706(9),PHAGE_Entero_mEp213_NC_019720(8),PHAGE_Entero_HK629_NC_019711(7),PHAGE_Entero_lambda_NC_001416(7),PHAGE_Entero_HK630_NC_019723(7),PHAGE_Shigel_SfIV_NC_022749(6),PHAGE_Entero_SfV_NC_003444(5),PHAGE_Phage_Gifsy_2_NC_010393(5),PHAGE_Shigel_SfII_NC_021857(4),PHAGE_Salmon_Fels_1_NC_010391(4),PHAGE_Entero_fiAA91_ss_NC_022750(4),PHAGE_Entero_PsP3_NC_005340(3),PHAGE_Ralsto_RSA1_NC_009382(3),PHAGE_Stx2_c_1717_NC_011357(3),PHAGE_Salmon_ST64B_NC_004313(2),PHAGE_Yersin_L_413C_NC_004745(2),PHAGE_Erwini_ENT90_NC_019932(2),PHAGE_Entero_HK97_NC_002167(2),PHAGE_Ralsto_RSY1_NC_025115(2),PHAGE_Burkho_KS5_NC_015265(2),PHAGE_Entero_YYZ_2008_NC_011356(2),PHAGE_Salmon_SE1_NC_011802(2),PHAGE_Salmon_SP_004_NC_021774(2),PHAGE_Entero_BP_4795_NC_004813(2),PHAGE_Entero_VT2phi_272_NC_028656(2),PHAGE_Pseudo_phiCTX_NC_003278(2),PHAGE_Salmon_SEN1_NC_029003(2),PHAGE_Salmon_vB_SemP_Emek_NC_018275(2),PHAGE_Salmon_RE_2010_NC_019488(2),PHAGE_Entero_UAB_Phi20_NC_031019(2),PHAGE_Salmon_Fels_2_NC_010463(2),PHAGE_Entero_P2_NC_001895(2),PHAGE_Entero_P4_NC_001609(1),PHAGE_Entero_P22_NC_002371(1),PHAGE_Entero_RB49_NC_005066(1),PHAGE_Escher_PA2_NC_028449(1),PHAGE_Entero_mEp235_NC_019708(1),PHAGE_Entero_WPhi_NC_005056(1),PHAGE_Entero_mEpX1_NC_019709(1),PHAGE_Entero_phi80_NC_021190(1),PHAGE_Stenot_Smp131_NC_023588(1),PHAGE_Phage_Gifsy_1_NC_010392(1),PHAGE_Entero_mEp234_NC_019715(1),PHAGE_Pseudo_MD8_NC_031091(1),PHAGE_Entero_EF62phi_NC_017732(1),PHAGE_Entero_HK542_NC_019769(1),PHAGE_Entero_IME10_NC_019501(1),PHAGE_Cronob_phiES15_NC_018454(1),PHAGE_Lactob_LF1_NC_019486(1),PHAGE_Salmon_SSU5_NC_018843(1),PHAGE_Entero_HK225_NC_019717(1),PHAGE_Entero_N15_NC_001901(1),PHAGE_Erwini_PEp14_NC_016767(1),PHAGE_Entero_186_NC_001317(1),PHAGE_Bordet_BPP_1_NC_005357(1),PHAGE_Burkho_phiE202_NC_009234(1),PHAGE_Escher_pro483_NC_028943(1),PHAGE_Erwini_phiEt88_NC_015295(1),PHAGE_Shigel_Ss_VASD_NC_028685(1),PHAGE_Entero_HK106_NC_019768(1),PHAGE_Entero_mEp390_NC_019721(1),PHAGE_Entero_GEC_3S_NC_025425(1),PHAGE_Pseudo_phi297_NC_016762(1),PHAGE_Pectob_ZF40_NC_019522(1),PHAGE_Bacill_SPbeta_NC_001884(1),PHAGE_Bacill_G_NC_023719(1),PHAGE_Entero_phiP27_NC_003356(1),PHAGE_Salico_CGphi29_NC_020844(1),PHAGE_Mannhe_vB_MhM_587AP1_NC_028898(1),PHAGE_Salmon_g341c_NC_013059(1),PHAGE_Stx2_c_86_NC_008464(1),PHAGE_Pseudo_F10_NC_007805(1),PHAGE_Burkho_KS14_NC_015273(1),PHAGE_Salmon_9NA_NC_025443(1),PHAGE_Mannhe_phiMHaA1_NC_008201(1),PHAGE_Plankt_PaV_LD_NC_016564(1),PHAGE_Salmon_ST160_NC_014900(1),PHAGE_Salmon_SEN22_NC_028696(1),PHAGE_Escher_phi191_NC_028660(1),PHAGE_Mycoba_Adler_NC_023591(1),PHAGE_Escher_P13374_NC_018846(1)   28                               21.79%                           49.55%                        
                                  14             9.8Kb                    questionable(70)              transposase                                  4786500-4796340          0                        13                      8                                3                                84.6%                            2                                no                               3                                PHAGE_Stx2_c_1717_NC_011357(3),PHAGE_Pseudo_MD8_NC_031091(1),PHAGE_Clostr_phiCD38_2_NC_015568(1),PHAGE_Clostr_phiCD111_NC_028905(1),PHAGE_Clostr_phiCD146_NC_028958(1),PHAGE_Escher_PA2_NC_028449(1),PHAGE_Escher_phi191_NC_028660(1),PHAGE_Escher_P13374_NC_018846(1),PHAGE_Entero_BP_4795_NC_004813(1),PHAGE_Escher_TL_2011c_NC_019442(1),PHAGE_Entero_VT2phi_272_NC_028656(1)   6                                23.07%                           49.47%                        
                                  15             11.2Kb                   incomplete(30)                protease,tail                                5088864-5100103          0                        21                      11                               4                                71.4%                            6                                no                               6                                PHAGE_Shigel_Sf6_NC_005344(2),PHAGE_Shigel_SfII_NC_021857(2),PHAGE_Salmon_SPN3US_NC_027402(1),PHAGE_Cronob_vB_CsaM_GAP32_NC_019401(1),PHAGE_Erwini_phiEaH2_NC_019929(1),PHAGE_Burkho_phi1026b_NC_005284(1),PHAGE_Erwini_vB_EamM_Huxley_NC_031127(1),PHAGE_Erwini_vB_EamM_Asesino_NC_031107(1),PHAGE_Pseudo_YuA_NC_010116(1),PHAGE_Pseudo_M6_NC_007809(1),PHAGE_Pseudo_MP1412_NC_018282(1)   3                                9.52%                            52.01%                        
                                  16             11.1Kb                   incomplete(20)                plate                                        5108102-5119236          0                        22                      17                               2                                86.3%                            3                                no                               13                               PHAGE_Entero_Min27_NC_010237(4),PHAGE_Entero_933W_NC_000924(4),PHAGE_Stx2_II_NC_004914(4),PHAGE_Pectob_ZF40_NC_019522(3),PHAGE_Escher_TL_2011c_NC_019442(3),PHAGE_Entero_VT2_Sakai_NC_000902(3),PHAGE_Escher_phage_NC_004913(3),PHAGE_Shigel_Ss_VASD_NC_028685(2),PHAGE_Entero_mEp390_NC_019721(2),PHAGE_Entero_mEp237_NC_019704(2),PHAGE_Shigel_POCJ13_NC_025434(2),PHAGE_Erwini_PEp14_NC_016767(2),PHAGE_Shigel_Stx_NC_029120(2),PHAGE_Escher_HK639_NC_016158(1),PHAGE_Escher_Av_05_NC_025830(1),PHAGE_Nitrin_1M3_16_NC_024217(1),PHAGE_Stx2_vB_EcoP_24B_NC_027984(1),PHAGE_Escher_PA2_NC_028449(1),PHAGE_Shigel_SfIV_NC_022749(1),PHAGE_Entero_mEp235_NC_019708(1),PHAGE_Vibrio_12B8_NC_021073(1),PHAGE_Haemop_Aaphi23_NC_004827(1),PHAGE_Entero_SfV_NC_003444(1),PHAGE_Entero_HK629_NC_019711(1),PHAGE_Entero_VT2phi_272_NC_028656(1),PHAGE_Phage_Gifsy_1_NC_010392(1),PHAGE_Salmon_Fels_1_NC_010391(1),PHAGE_Entero_IME10_NC_019501(1),PHAGE_Escher_vB_EcoM_PhAPEC2_NC_024794(1),PHAGE_Salmon_SPN3UB_NC_019545(1),PHAGE_Entero_phiP27_NC_003356(1),PHAGE_Salmon_SEN34_NC_028699(1),PHAGE_Entero_HK225_NC_019717(1),PHAGE_Salico_CGphi29_NC_020844(1),PHAGE_Phage_Gifsy_2_NC_010393(1),PHAGE_Entero_mEp213_NC_019720(1),PHAGE_Stx2_c_86_NC_008464(1),PHAGE_Salmon_118970_sal3_NC_031940(1),PHAGE_Yersin_PY54_NC_005069(1),PHAGE_Entero_mEp460_NC_019716(1),PHAGE_Entero_cdtI_NC_009514(1),PHAGE_Entero_UAB_Phi20_NC_031019(1),PHAGE_Shigel_SfII_NC_021857(1),PHAGE_Escher_phi191_NC_028660(1),PHAGE_Aggreg_S1249_NC_013597(1),PHAGE_Escher_P13374_NC_018846(1),PHAGE_Shigel_SHSML_52_1_NC_031090(1),PHAGE_Entero_ES18_NC_006949(1),PHAGE_Entero_RB69_NC_004928(1)   4                                18.18%                           48.82%                        
                                  17             40.5Kb                   intact(150)                   tail,integrase,terminase,head,portal         5123265-5163807          1                        59                      53                               3                                94.9%                            3                                yes                              11                               PHAGE_Entero_BP_4795_NC_004813(34),PHAGE_Entero_YYZ_2008_NC_011356(25),PHAGE_Stx2_c_1717_NC_011357(18),PHAGE_Entero_lambda_NC_001416(11),PHAGE_Entero_VT2_Sakai_NC_000902(11),PHAGE_Stx2_vB_EcoP_24B_NC_027984(10),PHAGE_Stx2_II_NC_004914(10),PHAGE_Entero_HK629_NC_019711(7),PHAGE_Entero_933W_NC_000924(7),PHAGE_Entero_HK630_NC_019723(7),PHAGE_Escher_phage_NC_004913(7),PHAGE_Shigel_Ss_VASD_NC_028685(5),PHAGE_Entero_Min27_NC_010237(4),PHAGE_Pseudo_PAJU2_NC_011373(4),PHAGE_Entero_HK446_NC_019714(3),PHAGE_Entero_VT2phi_272_NC_028656(3),PHAGE_Entero_HK544_NC_019767(3),PHAGE_Entero_HK140_NC_019710(3),PHAGE_Stx2_c_86_NC_008464(3),PHAGE_Entero_SfI_NC_027339(3),PHAGE_Escher_P13374_NC_018846(3),PHAGE_Entero_mEpX1_NC_019709(2),PHAGE_Entero_HK106_NC_019768(2),PHAGE_Entero_mEp390_NC_019721(2),PHAGE_Entero_mEp237_NC_019704(2),PHAGE_Entero_HK97_NC_002167(2),PHAGE_Entero_c_1_NC_019706(2),PHAGE_Escher_TL_2011c_NC_019442(2),PHAGE_Burkho_Bcep176_NC_007497(2),PHAGE_Shigel_Stx_NC_029120(2),PHAGE_Escher_pro483_NC_028943(2),PHAGE_Bacill_Fah_NC_007814(1),PHAGE_Shigel_SfIV_NC_022749(1),PHAGE_Xantho_phiL7_NC_012742(1),PHAGE_Entero_phi80_NC_021190(1),PHAGE_Entero_mEp234_NC_019715(1),PHAGE_Salmon_Fels_1_NC_010391(1),PHAGE_Entero_HK542_NC_019769(1),PHAGE_Bacill_PM1_NC_020883(1),PHAGE_Escher_HK75_NC_016160(1),PHAGE_Salmon_SEN34_NC_028699(1),PHAGE_Entero_HK225_NC_019717(1),PHAGE_Rhodob_RcapNL_NC_020489(1),PHAGE_Entero_N15_NC_001901(1),PHAGE_Phage_Gifsy_2_NC_010393(1),PHAGE_Xantho_OP1_NC_007709(1),PHAGE_Entero_Sf101_NC_027398(1),PHAGE_Entero_mEp213_NC_019720(1),PHAGE_Lactob_LL_H_NC_009554(1),PHAGE_Escher_Tls_NC_009540(1),PHAGE_Cronob_ENT39118_NC_019934(1),PHAGE_Entero_mEp460_NC_019716(1),PHAGE_Entero_cdtI_NC_009514(1),PHAGE_Edward_PEi21_NC_021342(1),PHAGE_Escher_phi191_NC_028660(1),PHAGE_Burkho_phi1026b_NC_005284(1),PHAGE_Sinorh_phiLM21_NC_029046(1)   35                               57.62%                           52.95%                        
                                  18             16.8Kb                   intact(110)                   tail,transposase,head,capsid                 5265140-5281986          0                        23                      18                               1                                82.6%                            4                                no                               12                               PHAGE_Entero_HK225_NC_019717(6),PHAGE_Entero_mEp237_NC_019704(5),PHAGE_Entero_lambda_NC_001416(4),PHAGE_Entero_HK629_NC_019711(4),PHAGE_Shigel_POCJ13_NC_025434(4),PHAGE_Entero_HK630_NC_019723(4),PHAGE_Shigel_Stx_NC_029120(4),PHAGE_Phage_Gifsy_1_NC_010392(3),PHAGE_Escher_HK639_NC_016158(2),PHAGE_Entero_Min27_NC_010237(2),PHAGE_Entero_N15_NC_001901(2),PHAGE_Stx2_II_NC_004914(2),PHAGE_Escher_phage_NC_004913(2),PHAGE_Shigel_SfIV_NC_022749(1),PHAGE_Haemop_Aaphi23_NC_004827(1),PHAGE_Entero_phi80_NC_021190(1),PHAGE_Pectob_ZF40_NC_019522(1),PHAGE_Bacill_PfEFR_5_NC_031055(1),PHAGE_Entero_phiP27_NC_003356(1),PHAGE_Salmon_SPN3UB_NC_019545(1),PHAGE_Salmon_SEN4_NC_029015(1),PHAGE_Salico_CGphi29_NC_020844(1),PHAGE_Salmon_RE_2010_NC_019488(1),PHAGE_Phage_Gifsy_2_NC_010393(1),PHAGE_Entero_933W_NC_000924(1),PHAGE_Salmon_SEN5_NC_028701(1),PHAGE_Entero_YYZ_2008_NC_011356(1),PHAGE_Edward_GF_2_NC_026611(1),PHAGE_Entero_cdtI_NC_009514(1),PHAGE_Shigel_SfII_NC_021857(1),PHAGE_Entero_P88_NC_026014(1),PHAGE_Bacill_250_NC_029024(1),PHAGE_Salmon_SEN22_NC_028696(1),PHAGE_Salmon_Fels_2_NC_010463(1),PHAGE_Entero_VT2_Sakai_NC_000902(1),PHAGE_Burkho_phi1026b_NC_005284(1),PHAGE_Aggreg_S1249_NC_013597(1)   6                                26.08%                           52.88%                        
