gi|00000000|ref|NC_000000|  Mannheimia haemolytica strain 2578MH isolate swab isolate 1 [asmbl_id: NC_000000].45291, gc%: 40.21%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
complement(32524..33564)           PHAGE_Mannhe_phiMHaA1_NC_008201: portal vertex protein; AVJ64_RS07105; phage(gi109289937)     0.0                 MKKQLRKNLTQNDRLQPQAQTEIFSFGDPIPVLDRADILNYLECSAMYEKWYNPPMSFDGLAKSLRSSTHHESAIITKANILLSTCEVDSRYLSRRDLSSFVKDYLVFGNAYFEVVRNRLGQVQRIESPLAKYVRKGLEAGQFYYVPQRFDHQEHEFAKGSIYHLLEPDINQDIYGLPQYLSALQSAWLNESATLFRRKYFLNGAHAGFVFYMSDASQKQEDVENIRQQLKQSKGVGNFKNLFVHAPNGKKDGIQIIPIADVSAKDEFFNIKNVSRDDVLAAHRVPPQLMGIIPNNTGGFGNVADAAEVFFITEIEPLQERLKEFNQWLGQEVIKFKPSKLLQRTQ
complement(33573..35411)           PHAGE_Mannhe_phiMHaA1_NC_008201: terminase ATPase subunit; AVJ64_RS07110; phage(gi109289938)     0.0                 MLKQGGFLIIAPMENENTITEYEVLAANPLHDKREAQSKYWAGYTVTEISRQLNIPVSTIASWKKREKWDEISPVGRVEATLESRLNLLIMKESKNNNDYKEMDALRRLLESTARIKKYSNGGGNEADLNPNIKNRNKGDRKKPEQNAISEEQAELLINGFLDGMFHYQKKWHEAGLTHRIRNILKSRQIGATYYFAHEALVDALVTGRNQIFISASKKQALQFRAYIVAYAKRVADVELKGETITLPNESQLIFLGTNSKTAQSYHGNLYFDEIFWVNRFEEIRKVAAGMASQKQYRITYFSTPSSITHSAYLLWSGKLFNRKRPKAEQVEIDISHANLKNGKKCGDGQWRQIVNIYDAEAGGCNLFDIEQLKLENSPDEFEQLFMCEFIDDNQSVFKFTMMQRCLVDSMEVWRDYVFTDGYQRPFGNKEVWVGYDPSYTGDRSALVVIAPPKVDGGKFRLLEYRTFKGADFAEQAAEIVAICAKYNVTRLAIDTTGLGVGVYEIVKKERPDAVALTYNVELKSKMVLKGLDIISKGRFEFDSMHAVEVGASFMAIKKQITNSGRQVTYVADRSEEASHADLAWACLQVFINEPFDGKLEETTGTVDFLDD
35525..36352                       PHAGE_Mannhe_phiMHaA1_NC_008201: capsid-scaffolding protein; AVJ64_RS07115; phage(gi109289939)     0.0                 MTTKSKWFVVATEGATTDGREISREWLTQIEENYDPKNNYGARINLEHFRWRWFEKDDPHSYSYGDVLAVKTEEREDGKLQLLAEIAPTEALVKLVKDKQKVYTSVEIDLNFADTGEAYLVGLAVTDTPASLGTEYLTFCAGATHNPLADRKQKPENLVSEAVEANLEFTAEPEKGAWLEKFKAMFTKAKTDNDGKFAEHEKAMELLAEQFSKVSTENDRLQTELSTLQIEFTELQKQAGEFAEKFAKLEQEPSANYTPRPKATGAKAGDVQTDF
36366..37394                       PHAGE_Mannhe_phiMHaA1_NC_008201: capsid protein; AVJ64_RS07120; phage(gi109289940)     0.0                 MKDLTLEKYNAYLARQAELNNLPFNALATGIKFTVQPSVQQKLYEKVRESSDFLKSISFVFVDEQTGETLGLDSAHTVASTTDTSGDGERKTTSIAKLVKQTYHCQQINFDTHINYKQLDMWAKFPDFQQKVANVAAKQRKRDLIMIGFNGTSRAATSDRNSNPLLQDVAKGWLQKMREDAKERVMNGESTDNQVLVGKGQEYANLDALVMDATEELIDEWHRDDTDLVVITGRKLLADKYFPIVNQQNAPTEELAADIVISQKRIGGLKAVRVPFFPANAILITKLENLAIYVQEGTTRKHIENVPKKDRIETYESENIDYVVEDYGCAALIENITLKDKE
37404..38093                       PHAGE_Mannhe_phiMHaA1_NC_008201: terminase endonuclease subunit; AVJ64_RS07125; phage(gi109289941)     1.72e-167           MRMSPARAHFLRKTAESESATPNRENLEGLQGYDLVLAQLKAHQRQLKKIQSIERKIEFKRNNFEQYRPWVEGSLAKGSGVQDTVITTMLIWSIDIGDYPTALAIAQYVLMHDLAMPEQFERTPATALVEELAEAAKKARDQKQPFEAAVLKQANDLTAEFDMPDPVRAKLLRELGELIQEAEPQTALEHYQRAIALDPQCGAKGLRDKLEKQLAKQAEEPKPAEEQNE
38205..38720                       PHAGE_Mannhe_phiMHaA1_NC_008201: head completion protein L; AVJ64_RS07130; phage(gi109289942)     5.37e-124           MEQRNHVISIPKVNGYESSKNAIKPTAESDETITNNGFFPNIELLEVRNAMRIDGTVINERLKQAVIEAMATVNADLKAYRLNAEQAQKANLQACDDEQINGESVLVYKYKRAVYCLAVANLYERYRSYDSTKDGHDKAEELESTAGDLKRDYHFAVRDILGENRMISELI
38717..38929                       PHAGE_Mannhe_phiMHaA1_NC_008201: tail synthesis protein X; AVJ64_RS07135; phage(gi109289943)     2.68e-46            MNTLIARQDDTLDELIFRHYGQTAGLVEQALEYNPELAHLPRLPIGTVVTMPDIESRFATVAKSSVQLWD
38935..39141                       PHAGE_Mannhe_phiMHaA1_NC_008201: possible holin; AVJ64_RS07140; phage(gi109289944)     2.73e-43            MHKTEQASYFGAIFGFFGSLTLSDWGVVVSILVAILTLLLNWAYRAKEYKLKEREFELKLQNQGKKNE
39134..39700                       PHAGE_Mannhe_phiMHaA1_NC_008201: endolysin; AVJ64_RS07145; phage(gi109289945)        1.82e-138           MSKSVKVGVFVCSVAAIIGTVKQYYSSEIRTSETGLAIIGNAEGCRRDPYKCPADVITVGIGSTEASGEKINVNHKYTDKEIAERWIKDLKIAERCINRYFNGDKMNENQFSAMVSAAFNMGCYNLRFYPNENGKYIQTTIHKYAMAKDFKAMCNRIPDFNRSGGKVLRGLKIRREKEKALCLGQEVK
39697..40152                       PHAGE_Mannhe_phiMHaA1_NC_008201: hypothetical bacteriophage protein; AVJ64_RS07150; phage(gi109289946)     9.00e-107           MIVKLCQMTNKHFSPLMIVLVLVGVLANFVQFRQNESLKADLQARTTQNQLIQADNRNLANQLENSQIQLEAYQKQVDDLNQKVLAKMKQAEQRSNEILNELEKHKKWADSAVPPSVGKLLNQRKRAVSHPQIEPDNLSEKAGVPNTGNRD
40301..40522                       PHAGE_Mannhe_phiMHaA1_NC_008201: DksA-like zinc finger domain containing protein; AVJ64_RS07160; phage(gi109289947)     7.77e-48            MSDQIDRANELAEKAREAALAKILQNQTACTSLFECEDCGEPIPEKRREMVIGCTRCIECQTIYEHKQKGYRR
40519..41004                       PHAGE_Mannhe_phiMHaA1_NC_008201: tail completion protein R; AVJ64_RS07165; phage(gi109289948)     2.52e-115           MIKPDRLRAVLTQTIDIFQANPEKLILQYDKGKIKSKGSQSHSFEYHYDLELIVVDFPYHPDVLFVPVLNFVRNEQWELLQNPELQDKIEFEIDHNNHESYDIYIRLPLTERVIVKEQDGHLTATHADEPNLADVSPFTRLTEYEVYLKDELIYQWAEPNE
40997..41455                       PHAGE_Mannhe_phiMHaA1_NC_008201: tail synthesis protein S; AVJ64_RS07170; phage(gi109289949)     1.45e-106           MSEPIEQVKTAFDSLLNNISKPRRRLMYQQIGRELDRSQRRRIKAQQNPDGSAYEPRKKPKKGVKSKIKSGKMFDKITQPRFMRLRLESEGVSLGYEGGDAVIARIHQQGLIGRVRKDWDLKVKYASRELLGFTDDDLQMIEDYMINILAGS
complement(41506..41784)           PHAGE_Mannhe_phiMHaA1_NC_008201: hypothetical protein; AVJ64_RS07175; phage(gi109289950)     2.60e-55            MEILFILLGLIGFGALLAIGFTTFAAIFGVVTTVFLSLLSLLANMVGLSIIVILISLYVLLPLNTFILIALIFSAILGFLCWYHSDRQSVNQ
41823..44735                       PHAGE_Mannhe_phiMHaA1_NC_008201: tail protein T; AVJ64_RS07180; phage(gi109289951)     0.0                 MSNNLKIQVVLSALDKLTAPFKSVVKTEKLSQSLKVQRDELKALEKTQSKMQSFKKMDDSIKKSNETILKQTKHLDNLKNKISQMKNERIELKVKMDAKKREFQQITKGGSAWSARAAFLDKDFEKMQREYEKLGASISSVSRKRTEENRALKDSRHQQAKQLLYFRSLRRELRASGINIKAFAQSETNLTDKIAKANQLIDQQKAKLEKLNAVKARNEKYWATVEKVKNTSERLHNLGQRSMISGAAISAPVVGLGKGVVGMAQTAGKFEQFNAILEVTEGSAEKAKQSFDWVKQFAVDTPSNLDEAMEAFVKLRAYGLDPTNGLLQTLGDTGAAMGKPVMQAVEAIADALTGENERLKEFGIKGSVVKGTNIIEYAYTDKLGKQQVAKVNKNNRKEIEQTLTRIFNEKYAGAMEKQAKTLVGIWAKIEDYWTNFQMQVMESGAFDWIKNKLQWVLDSLDKMAENGELQKWAEDVGAVIQETVQGLWAFGEKIIEVVKWLASLARENKGLIATFVKWSAILGSSLTVLGAFAVVASFALYPVARLALGIGKFTGASTLLNKALFDSNDKFRLFNKSLYSSGTTAAFVKSKFNQLATLPNVLGSSFNKLGGGIKMLIPQLKTKVFWLNMLKGILGKLWSAIRFIFSPLKLLLGIFSPIGLAITAISVAGVALYRNWEKVRAFFGGFLQGLSKGLAPVLERFKPLGKLFETISNWVKSTFKWLSDLLTPADKTSESLDKASSAGEKFGLALAGAIDLVTSPVQWLVDQFKWISENMPSWDTIGEGVKKAATAIVPTEHAKQITKTAEMSNNMYDPNYTPPQLEQKWIGGLVGNGKGRGFATGGYTGNGGKYEPAGIVHKGEYVMTKEATARLGVANLNRLNYGKVAGLTALASSVAFAQPMPAVKIDSRPPLTASQPSPTVAPVSQNIHITINATGGQDPQAIARLVAMELEKQQRQAQARARSSLRDRG
44969..45238                       PHAGE_Mannhe_phiMHaA1_NC_008201: hypothetical protein; AVJ64_RS07185; phage(gi109289953)     6.00e-53            MAKITIKPQALSQFDEIVKSVIEFTGFETSGIRLQSDIFDKIEQIAFMPLSGRAREDGTRETFVRRYRIVYDYDRQADEVIICRRSNLI
