gi|00000000|ref|NC_000000|  Mannheimia haemolytica strain 2578MH isolate swab isolate 1 [asmbl_id: NC_000000].46366, gc%: 41.17%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
44..286                            PHAGE_Mannhe_phiMHaA1_NC_008201: hypothetical protein; AVJ64_RS07190; phage(gi109289959)     2.15e-55            MTKKHYCTGWRSAPANINSCCHQHDRDYGIRGTVTRADADKRLRECMIKNGNPIRAWLFWLVVRAFGWRFYKNKEIKIEK
629..642                           attL                                                                                 N/A                 AGCGGTTATTTTTT
692..1873                          PHAGE_Mannhe_phiMHaA1_NC_008201: major tail sheath protein; AVJ64_RS07195; phage(gi109289960)     0.0                 MSILDTYLHGVEVVEVNAGGVTISTAATSVIGVVCTGDQADAETFPLNTPVLITNPLNYLEKAGSTGTLRRTLNSIGSIVKTPTVIVRVAESDDSDTLTANIVGTQENGKFTGIKALLTAQSTVFVKPKLLCVPQHDNQAVATELLSVAKKLNAFAFISDNGATTKEQAYTYRQNFSQREGMMIFGDWKSYNTDKKAYDTDYAVARACALQAYIDKTVGWHKNISNVELDGVTGITKAVEFDINESSTEANYLNEKGITICLNHNGFRYWGSRTLATDTRWAFQQSVRTAQIIKETIGAGLAWAVDMPLTPLRVKTMLEAINNKLRSWASGDDPRILGARVWVAEEITADIIKSGKFVIKYDYHWIPSLESLGLEQRVNDEYVVDLVNTLKAL
1882..2388                         PHAGE_Mannhe_phiMHaA1_NC_008201: major tail tube protein; AVJ64_RS07200; phage(gi109289961)     1.84e-120           MGLPAKLKNFNFSVDGTSYLGETTEVTQPKLAMQLEDYRAGGMIAPVGVNMGLEKLELEFKIGGHEEDLLKLFGGSISGNAFRFNGAYQHDDDDSVDAVELVCRGRIAEIDEGSSKAGDDTEHSYKASLTYYKKTVNGVDIIEIDTLNQIYIVDGKDRLAEIRKAMGL
2467..2781                         PHAGE_Mannhe_phiMHaA1_NC_008201: tail protein E; AVJ64_RS07205; phage(gi109289962)     4.90e-69            MKKVTLKQGILRGEKRITEIEVRKPLTKQLRGTNLTSLMQLSVDEWCIVLPRITTPKLDKADFATMSAADLLKLSGKALDLMSEDFDEADEEDSEEQGKGEILA
2805..2921                         PHAGE_Burkho_phiE12_2_NC_009236: gp30, phage tail protein, P2 GpE family; AVJ64_RS07210; phage(gi134288723)     1.35e-08            MADIATVFHWTPNTFDEMTIVELGQWREKARLRNGVES
2985..3332                         PHAGE_Mannhe_phiMHaA1_NC_008201: hypothetical protein; AVJ64_RS07215; phage(gi109289963)     4.15e-76            MEIKTVTFSKVITAFIFHIITLFVFTQLNEQAQATFMFFWWFFISLRFILVVGIMCVGIEELKIQEYRQTKAYACFSFISNFALCLQFVYFEHLIAAILFLISYIIYHSQTVTIK
3334..3771                         PHAGE_Mannhe_phiMHaA1_NC_008201: tail protein U; AVJ64_RS07220; phage(gi109289964)     1.96e-103           MLQQFAMMSLGYFVFMRLTIPYQDTSREMNWSHVQNDVVGAMPKSQFTGKAGETMEISAELRPEITGGKMSILALEMMAEQGSAYPLISGSTFMVLGWFVIDRISEQETTFFADGTPRAISFSMSLKRVDDSLLANIIDEVAGFI
3771..5009                         PHAGE_Mannhe_phiMHaA1_NC_008201: tail protein; AVJ64_RS07225; phage(gi109289965)     0.0                 MDFLTELTNHNHRTPAVSVTVRPKPSKDNEGEKAKDISTLITHRLIQLTLTDNRGFEADQLDLELDDTDGLLALPSRGAILSVGLGWQNSPLTYKGEYTVDELTHDGPPDKVTIRARSADLRGTLTNRHERSFHRTTIGKIVKQIAEENKLKPMVGKEFENEEVKHIDQTNESSINLLQRLAEQFDAIATVKNGNLIFIKAGNATTASGKLLPLFRITRSSGDSHSFSIAEGDNYKAVKAYWHNTQTGKRGEVTWDENSQVKKVTKPTMRKKTKVKRGADGKPIKGKDGKSIKETVFVKGKGRQVNAVVQSKPIESDSEAIKTLPHTYATAQSAINACKRNFEKLQRGVATFSLTLAEGNAELIPELPVQVSGFKAEIDSNEWIISQVTHSLNKGGGFTTALEMELKPKSED
complement(5192..5998)             PHAGE_Mannhe_phiMHaA1_NC_008201: hypothetical bacteriophage protein; AVJ64_RS07230; phage(gi109289966)     0.0                 MNNQSVWHLFCDESGISGKPFYAFGALWIREDKISLFEKEIQKLREKHYCTDEIKWQGTNSKRFSEFYRELVSFFFQADYLFFNCIVVQQAIVNKAFHNGDYEMAKQKHFNLLICNKIEQSLYKNRINRFVLSVDDLPFKYNKADEAMHIIANNIIRKKTAVANAILALNEVDSRKSSGVQLCDLLLGAILSSYQNDITSERKKELTKWIALHLGWDKLTYDTLQEEKKFNIWYFYDPTKGPRIVRTRETKLKYPLLKKKEQTFQPAR
complement(6033..6293)             PHAGE_Mannhe_phiMHaA1_NC_008201: hypothetical protein; AVJ64_RS07235; phage(gi109289967)     1.10e-56            MKKLVLSILFVISPMALAYSCNDPIPYCKEMQSCEQAKFYLNQCNAGRLDRDNDGIPCENVCGKKGKSEKKDDKKSDKSKSKKTSN
complement(6393..6803)             PHAGE_Mannhe_phiMHaA1_NC_008201: hypothetical protein; AVJ64_RS07240; phage(gi109289968)     1.79e-74            MFIPKSSKLKTNNYIEELNIKSIGETDMKKALTLLALSLFALPVQADSLELARNKVKQIFISDEEPKVKDATWTAPFIFKVGVFDDGTKRDGYAEYVCQVLYDHGFKGKGVLVSVIDIKKLVQTGDWVDLGKAKCQ
complement(6821..7339)             PHAGE_Mannhe_phiMHaA1_NC_008201: hypothetical protein; AVJ64_RS07245; phage(gi109289969)     1.55e-123           MEHQNLTHLVYITSHKQIGVYSISNLNIDDLYFKGYCIQKNRVITLRADRIIKQFDDLALAENYAKNIPQDVFYLFDSLLNQQRKEKITPIYKIGLCFTGFKQARKNELIQLAVDNDLRVVQNVTGAVDFLIFDKESKTVGPAKLAKAEKLGIKIIDDEEFLYMLETGVVPD
complement(7343..8029)             PHAGE_Mannhe_phiMHaA1_NC_008201: CI repressor; AVJ64_RS07250; phage(gi109289970)     2.44e-169           MDTLASRLKIVLDQKGLTQEKFAEQIGVSQPSVFKILNGQTRNPTRIYEIANVLDVDVNWLKTGKGEAPDFAKIGKNPTAYEEESSMLRLEVLDVYASAGNGSFVTGDLTAYTHAVEFENAYFAQVFQRANAKGLSIINVDGDSMEPTIGNGDLLFVDTTKSAYQGDGVYVFSYGENLYVKRLQFAGDELLVISDNPLYKEWRITSENEHKFQIHGKVEFMQGHIRRV
8153..8365                         PHAGE_Mannhe_phiMHaA1_NC_008201: Cro repressor; AVJ64_RS07255; phage(gi109289971)     2.14e-43            MTNKKIQKAIELVGTQTKLAEACGVSQPTVLKWLNGGGISAEYLLKIEAATNGQVTIREICEELGNATAK
complement(8464..8709)             PHAGE_Mannhe_vB_MhM_587AP1_NC_028898: hypothetical protein; AVJ64_RS07260; phage(gi971753899)     1.15e-50            MNTEDQIIELTVEVENLRHQLNAKNIILDDLKGRLTDYQRKRLDRLFERSRRQYLNDLDLEEEQAEALEAICNELESFLAN
8842..9114                         PHAGE_Mannhe_phiMHaA1_NC_008201: hypothetical protein; AVJ64_RS07265; phage(gi109289973)     5.07e-62            MNLDHTCTNCKSKNLRVRTSEKIGLLTIQAVTYCNNCGTEQLVQSQIIRVRTPIYKERPEAMRINKCLMEADLNTPDLFDGVVADQPKQD
9197..9529                         PHAGE_Mannhe_phiMHaA1_NC_008201: hypothetical protein; AVJ64_RS07270; phage(gi109289974)     9.81e-72            MSKQLYYRHKSRWNRLNRLKKMNKRRLNLFLQEKRVANLESRLADEVELAKLNSEQIGDLLQALELKVNRLIRQNEKLKARVIKLEKVKQTQKQGLFAMFKKVLGSKGNP
9542..9835                         PHAGE_Mannhe_phiMHaA1_NC_008201: hypothetical protein; AVJ64_RS07275; phage(gi109289975)     1.01e-68            MDFVATYQKIRINTNHKQFTCNHLGEIWGKENDDFKRFLLRVAFLQDNPEPKPWGAYSPQEKRLLHSFSLWLEQIADFQRVMKRESKLREKHINAPD
9987..10229                        PHAGE_Mannhe_phiMHaA1_NC_008201: hypothetical protein; AVJ64_RS07280; phage(gi109289976)     1.09e-53            MSLITVNDYKIKKDILDADGKPCYQLYQGEELLRDTTNLSEIIAYMFIRAEDKPFDELYNHIINQEAGAKTDIKFTVTVR
10226..10558                       PHAGE_Mannhe_phiMHaA1_NC_008201: hypothetical protein; AVJ64_RS07285; phage(gi109289977)     9.61e-79            MSQITKSAYTHIHPNWQAPRGNTYRIERYELKRRYALFCNGERVVLYKDPTHPNKNVESHIESDVLLLWLLKNELGWSGNIKEPLSPQDVENIRLLEQAFCLTYNGTFIK
10555..12915                       PHAGE_Mannhe_phiMHaA1_NC_008201: replication protein A; AVJ64_RS07290; phage(gi109289978)     0.0                 MNYQNEILSATEAFAIGVSLPPVAGASACALELHSDRLYQAFKQPYTSMVQQELFSKDPIHEPLRQSYFERLPRALAEHFGRQYKQKLHYQSQYDTADWFKAEMARKMPRIEAVISQYCDVFDFLKQSHQDLDFLAELDSNVYFGAGVDTQQAVQKIKQDAEVKGIQLPMHLCRLENSSRYLKAHGIRPLAYQTEEQIKQLALGIAYRVRQIQQDNIEQNMHKATDGDTAYSVLLECYRAMMGEVNKLKIDSPYQKKARKGRLTEEEITTGFLKMTCEKWWTRKLSKIAEQMKEHLAIACGMVNMLSPYCSNARLKAFEAQRKANIDYLKSMIIANIAEPEEQLSLFETWLKSASNPKIKRLELLTRMNGFERYADKQGHEGWFITLTAPSKYHAMLSRTSSVNPKWNGASPAETQVYLVNTWAKIRAKLNREGVMAYGFRVAEPHADATPHWHLILFTRPEDMEKLRRVFLSYALEVDGTEAGAKKYRCKFKRIEKEKGSATGYLVKYVSKNIDGFGMDGELSDEANIQAKENAARVGAWSSVWCIRQFQQLGNIPISLWRELRRLGSVEQEDETLEKLRVIADSGEWDVFTEELGGALVKRADLVARITYTERKSETGEALYTMYQEPSLKVSGIINIKNGVQINTRPKEWSIQLKPKNWEEQQLQKKLENATETERAEVKRKYYEKLGFNEEAIALLGELAPPWTCVSNCTGSKNNQISEEARNCLRNELITMRGRVTEHQIDDLLNGKRLKIWGNSQKTMFVSYSRGRLIEHIVDNYESFLN
12928..13260                       PHAGE_Mannhe_phiMHaA1_NC_008201: hypothetical protein; AVJ64_RS07295; phage(gi109289979)     2.23e-74            MVKFIRLNLINYFIEKDEYGEPVRCRAFRYDEIIQTKFIEGFREGEIPADDYGFEDWNGSVLILNEEGRKYFENYLFDVKKNYCRARDNYVYVLETLDEIEMKLGLLEAK
13260..13712                       PHAGE_Mannhe_phiMHaA1_NC_008201: single-stranded DNA binding protein; AVJ64_RS07300; phage(gi109289980)     3.96e-108           MNLVTLVGRLGQDPDIRTMQNGEKAAALSVATSEKWTDKQTGVKKESTEWHRVVLYRRLAEIAELYVKKGHLVSIIGKIKTRKWTDSNGVERSITEIIAEQMQMLSSGEKNTPNTPNKAENKPQPKQKNQDVMTADEQKDIPQFDDDIPF
13723..14055                       PHAGE_Mannhe_phiMHaA1_NC_008201: hypothetical bacteriophage protein; AVJ64_RS07305; phage(gi109289981)     7.80e-59            MREWEKQMPFSANLHIRPTGKFEVKNVNIEQIIGERGKNYGNFDDVATMSQQLKAVLLDTNTQLKPHQKEAGEMICLKLARIFAGCNPDYEDNWRDIAGYAVLGGKLNEK
14045..14314                       PHAGE_Mannhe_phiMHaA1_NC_008201: hypothetical protein; AVJ64_RS07310; phage(gi109289982)     1.14e-59            MKNKMGSKFIRVRVEHPQRKKEDIELVQDVVAYHIFNLFKFEESGLRGFSQYDLEIDVKVKPVLEQKEMPVDVWIDDLGGKNGTITSGQ
14289..14579                       PHAGE_Mannhe_phiMHaA1_NC_008201: hypothetical protein; AVJ64_RS07315; phage(gi109289983)     2.32e-66            MEQLQAVSNEQVFAKLCEVERLLKTKGVNEHSRELWDLGDVAAYFGYTKEHTSRSVVSSPHFPKPIALDGLRGKGRGAKKWVSGEVVKFCLMWKVK
14579..14796                       PHAGE_Mannhe_vB_MhS_535AP2_NC_028853: methyltransferase; AVJ64_RS13400; phage(gi971749623)     3.15e-11            MIKKIILDACCGSRMFHFNKHNPSVLFADNRESLYRKFMLSNTNLSMGIKAVNITKRIGWHLRWIITIICAA
complement(14849..15031)           PHAGE_Mannhe_phiMHaA1_NC_008201: hypothetical protein; AVJ64_RS07325; phage(gi109289984)     2.14e-34            MAMSRNEIQAKSEAKRGIKQKSFKLPLEVIAEIEVLSQKLNIPQNQLIIQAIQQFKQNNP
complement(15309..16307)           PHAGE_Mannhe_phiMHaA1_NC_008201: integrase; AVJ64_RS07330; phage(gi109289985)        0.0                 MATIIKNGNKYRAQVRKKGIYKTATFSTKTEANRWAYALEAQIDAGEYNTTPNILFAELIDKYLKEVTPTKRGKREERYRLLRIAGSNLGNIPLPALTKEHLRQWQNQRLQEVQPVSVSRERATLSALFTKAMEWDYLKENPLKTLEKIKTPPARTRRYSDEEIDKLIFVSGYSPNQPPLLMQQRAGAALLFAIETAMRAGEIAGLKWEHINLQARTAFLPQTKNGYSRTVPLSTKAIAILNQLAQLEPNKQNSVFQLTSRSLDSNFRKLKQKANLHNADLHFHDTRREALTRLSKYLTVMELAKVSGHRDLSILQNTYYNPDISELVSKLQ
complement(16535..16611)           tRNA                                                                                 N/A                 GCGACTATAGCTCAGTTGGTTAGAGCACCACCTTGACATGGTGGGGGTCACTGGTTCGAGTCCAGCTAGTCGCACCA
complement(16675..17475)           PHAGE_Salmon_SP_076_NC_021782: NinI protein; AVJ64_RS07340; phage(gi525972760)       2.20e-12            MATYIVGDLHGCFNEFQLLLEKVNYNPKQDELFLTGDLVARGEDSLACLRFVKDSANNAKTVLGNHDLHLLGIKRVKPNDKIDAIFEAKDRLDLQNWLRNQPLVIHHPKHQFLLTHAGISPEWDLATTLACAKEAEKVLQSDNYADYIAQMYENKPERWSEDLQGVERWRYIINVFTRMRFCYTDKRLDFDCKLPLEQAPQELLAWFDLDNPLFTQKNIIFGHWASLMGKCTRPNIYALDTGCAWGSHLTMLRWEDKQIFTQKRLK
complement(17567..19543)           PHAGE_Lactoc_Q54_NC_008364: putative ribonuclease; AVJ64_RS07345; phage(gi115304286)     1.98e-29            MFQNNPLLAQLKQQIEASKEYVAGVVKASDKAFGFLECDKKSYFIPPAEMKKVMHGDSVKAVVKRDGDKEQVEIDSLLEPMLDRFIAQVRLNKEGKLQLAVDHPSIKQTIPANTHKKATEKLENGDWVVAQLKTHPLRDDRFFFAQVTQFICKESDNFAPWWVTLARHEQPREPVANEKNYELHDELAREDLSHLYFTTIDSPSTQDMDDALFIEPIKQNGKRTGWRLVVAIADPTAYIPENSHIEKAARQRCFTNYLPGFNIPMLPRELSDDLCSLVPNEKRPALVGFIETDLNGNLIKETTFTSAWVESKDRLAYDDVSDYLEGVENAWQPQSEETKQQIEWLHQFTQARIQWRAENALLFKEQGDYTFELNEDGSVKDIHVEYRRIANQMIEESMILANICCAKFLSQHAKTGVFNTHSGFDPKNYELVKSFLLQTLASDENRDELAERYSAERLATLEGYCQMQRDIQDYPEKFLELRLRRYLTFAEFKAEVAPHFGLGITDYATWTSPIRKYGDMVNHRLIKQVLLGKQSQAVEESVLSRLQEARRQNRLVERDIADWLYARYLAPMVEQAVEFECEIADVSRGGLRAKVIKNGAQIFVPFSSLHDNKEEMEYRQEELALYIKGEKAYQIGQAVKVKLTEVRLETRSIVGNII
19703..19981                       PHAGE_Entero_lambda_NC_001416: Bor protein precursor; AVJ64_RS07350; phage(gi19263395)     2.35e-22            MKKLLAIATVFSLAACSTQTLELSPAKEAQYDRVQHFFVSGLAQKQEIDAAKICNGADKVGKVETETTFFNGLLGTITYGIYSPRQIRVYCN
20006..20302                       PHAGE_Entero_933W_NC_000924: Bor protein precursor; AVJ64_RS07355; phage(gi9632515)     6.20e-15            MKKLLAMSVLTALLTTACTTQTAHIGGKVTDNIKPTKSVTQSFFIGGIGQEETLNVVEVCGSKDKVQQVETVLSGGDILLGLVTIGIYTPRTANVYCK
22770..22783                       attR                                                                                 N/A                 AGCGGTTATTTTTT
