gi|00000000|ref|NC_000000|  Mannheimia haemolytica strain 2887MH isolate swab isolate 1 [asmbl_id: NC_000000].131345, gc%: 41.13%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
44..286                            PHAGE_Mannhe_phiMHaA1_NC_008201: hypothetical protein; AVJ80_RS09575; phage(gi109289959)     2.15e-55            MTKKHYCTGWRSAPANINSCCHQHDRDYGIRGTVTRADADKRLRECMIKNGNPIRAWLFWLVVRAFGWRFYKNKEIKIEK
613..626                           attL                                                                                 N/A                 AGCGGTTATTTTTT
676..1857                          PHAGE_Mannhe_phiMHaA1_NC_008201: major tail sheath protein; AVJ80_RS09580; phage(gi109289960)     0.0                 MSILDTYLHGVEVVEVNAGGVTISTAATSVIGVVCTGDQADAETFPLNTPVLITNPLNYLEKAGSTGTLRRTLNSIGSIVKTPTVIVRVAESDDSDTLTANIVGTQENGKFTGIKALLTAQSTVFVKPKLLCVPQHDNQAVATELLSVAKKLNAFAFISDNGATTKEQAYTYRQNFSQREGMMIFGDWKSYNTDKKAYDTDYAVARACALQAYIDKTVGWHKNISNVELDGVTGITKAVEFDINESSTEANYLNEKGITICLNHNGFRYWGSRTLATDTRWAFQQSVRTAQIIKETIGAGLAWAVDMPLTPLRVKTMLEAINNKLRSWASGDDPRILGARVWVAEEITADIIKSGKFVIKYDYHWIPSLESLGLEQRVNDEYVVDLVNTLKAL
1866..2372                         PHAGE_Mannhe_phiMHaA1_NC_008201: major tail tube protein; AVJ80_RS09585; phage(gi109289961)     1.84e-120           MGLPAKLKNFNFSVDGTSYLGETTEVTQPKLAMQLEDYRAGGMIAPVGVNMGLEKLELEFKIGGHEEDLLKLFGGSISGNAFRFNGAYQHDDDDSVDAVELVCRGRIAEIDEGSSKAGDDTEHSYKASLTYYKKTVNGVDIIEIDTLNQIYIVDGKDRLAEIRKAMGL
2451..2765                         PHAGE_Mannhe_phiMHaA1_NC_008201: tail protein E; AVJ80_RS09590; phage(gi109289962)     4.90e-69            MKKVTLKQGILRGEKRITEIEVRKPLTKQLRGTNLTSLMQLSVDEWCIVLPRITTPKLDKADFATMSAADLLKLSGKALDLMSEDFDEADEEDSEEQGKGEILA
2789..2905                         PHAGE_Burkho_phiE12_2_NC_009236: gp30, phage tail protein, P2 GpE family; AVJ80_RS09595; phage(gi134288723)     1.35e-08            MADIATVFHWTPNTFDEMTIVELGQWREKARLRNGVES
2969..3316                         PHAGE_Mannhe_phiMHaA1_NC_008201: hypothetical protein; AVJ80_RS09600; phage(gi109289963)     4.15e-76            MEIKTVTFSKVITAFIFHIITLFVFTQLNEQAQATFMFFWWFFISLRFILVVGIMCVGIEELKIQEYRQTKAYACFSFISNFALCLQFVYFEHLIAAILFLISYIIYHSQTVTIK
3318..3755                         PHAGE_Mannhe_phiMHaA1_NC_008201: tail protein U; AVJ80_RS09605; phage(gi109289964)     1.96e-103           MLQQFAMMSLGYFVFMRLTIPYQDTSREMNWSHVQNDVVGAMPKSQFTGKAGETMEISAELRPEITGGKMSILALEMMAEQGSAYPLISGSTFMVLGWFVIDRISEQETTFFADGTPRAISFSMSLKRVDDSLLANIIDEVAGFI
3755..4993                         PHAGE_Mannhe_phiMHaA1_NC_008201: tail protein; AVJ80_RS09610; phage(gi109289965)     0.0                 MDFLTELTNHNHRTPAVSVTVRPKPSKDNEGEKAKDISTLITHRLIQLTLTDNRGFEADQLDLELDDTDGLLALPSRGAILSVGLGWQNSPLTYKGEYTVDELTHDGPPDKVTIRARSADLRGTLTNRHERSFHRTTIGKIVKQIAEENKLKPMVGKEFENEEVKHIDQTNESSINLLQRLAEQFDAIATVKNGNLIFIKAGNATTASGKLLPLFRITRSSGDSHSFSIAEGDNYKAVKAYWHNTQTGKRGEVTWDENSQVKKVTKPTMRKKTKVKRGADGKPIKGKDGKSIKETVFVKGKGRQVNAVVQSKPIESDSEAIKTLPHTYATAQSAINACKRNFEKLQRGVATFSLTLAEGNAELIPELPVQVSGFKAEIDSNEWIISQVTHSLNKGGGFTTALEMELKPKSED
complement(5176..5982)             PHAGE_Mannhe_phiMHaA1_NC_008201: hypothetical bacteriophage protein; AVJ80_RS09615; phage(gi109289966)     0.0                 MNNQSVWHLFCDESGISGKPFYAFGALWIREDKISLFEKEIQKLREKHYCTDEIKWQGTNSKRFSEFYRELVSFFFQADYLFFNCIVVQQAIVNKAFHNGDYEMAKQKHFNLLICNKIEQSLYKNRINRFVLSVDDLPFKYNKADEAMHIIANNIIRKKTAVANAILALNEVDSRKSSGVQLCDLLLGAILSSYQNDITSERKKELTKWIALHLGWDKLTYDTLQEEKKFNIWYFYDPTKGPRIVRTRETKLKYPLLKKKEQTFQPAR
complement(6017..6277)             PHAGE_Mannhe_phiMHaA1_NC_008201: hypothetical protein; AVJ80_RS09620; phage(gi109289967)     1.10e-56            MKKLVLSILFVISPMALAYSCNDPIPYCKEMQSCEQAKFYLNQCNAGRLDRDNDGIPCENVCGKKGKSEKKDDKKSDKSKSKKTSN
complement(6377..6787)             PHAGE_Mannhe_phiMHaA1_NC_008201: hypothetical protein; AVJ80_RS09625; phage(gi109289968)     1.79e-74            MFIPKSSKLKTNNYIEELNIKSIGETDMKKALTLLALSLFALPVQADSLELARNKVKQIFISDEEPKVKDATWTAPFIFKVGVFDDGTKRDGYAEYVCQVLYDHGFKGKGVLVSVIDIKKLVQTGDWVDLGKAKCQ
complement(6805..7323)             PHAGE_Mannhe_phiMHaA1_NC_008201: hypothetical protein; AVJ80_RS09630; phage(gi109289969)     1.55e-123           MEHQNLTHLVYITSHKQIGVYSISNLNIDDLYFKGYCIQKNRVITLRADRIIKQFDDLALAENYAKNIPQDVFYLFDSLLNQQRKEKITPIYKIGLCFTGFKQARKNELIQLAVDNDLRVVQNVTGAVDFLIFDKESKTVGPAKLAKAEKLGIKIIDDEEFLYMLETGVVPD
complement(7327..8013)             PHAGE_Mannhe_phiMHaA1_NC_008201: CI repressor; AVJ80_RS09635; phage(gi109289970)     2.44e-169           MDTLASRLKIVLDQKGLTQEKFAEQIGVSQPSVFKILNGQTRNPTRIYEIANVLDVDVNWLKTGKGEAPDFAKIGKNPTAYEEESSMLRLEVLDVYASAGNGSFVTGDLTAYTHAVEFENAYFAQVFQRANAKGLSIINVDGDSMEPTIGNGDLLFVDTTKSAYQGDGVYVFSYGENLYVKRLQFAGDELLVISDNPLYKEWRITSENEHKFQIHGKVEFMQGHIRRV
8137..8349                         PHAGE_Mannhe_phiMHaA1_NC_008201: Cro repressor; AVJ80_RS09640; phage(gi109289971)     2.14e-43            MTNKKIQKAIELVGTQTKLAEACGVSQPTVLKWLNGGGISAEYLLKIEAATNGQVTIREICEELGNATAK
complement(8448..8693)             PHAGE_Mannhe_vB_MhM_587AP1_NC_028898: hypothetical protein; AVJ80_RS09645; phage(gi971753899)     1.15e-50            MNTEDQIIELTVEVENLRHQLNAKNIILDDLKGRLTDYQRKRLDRLFERSRRQYLNDLDLEEEQAEALEAICNELESFLAN
8826..9098                         PHAGE_Mannhe_phiMHaA1_NC_008201: hypothetical protein; AVJ80_RS09650; phage(gi109289973)     5.07e-62            MNLDHTCTNCKSKNLRVRTSEKIGLLTIQAVTYCNNCGTEQLVQSQIIRVRTPIYKERPEAMRINKCLMEADLNTPDLFDGVVADQPKQD
9181..9513                         PHAGE_Mannhe_phiMHaA1_NC_008201: hypothetical protein; AVJ80_RS09655; phage(gi109289974)     9.81e-72            MSKQLYYRHKSRWNRLNRLKKMNKRRLNLFLQEKRVANLESRLADEVELAKLNSEQIGDLLQALELKVNRLIRQNEKLKARVIKLEKVKQTQKQGLFAMFKKVLGSKGNP
9526..9819                         PHAGE_Mannhe_phiMHaA1_NC_008201: hypothetical protein; AVJ80_RS09660; phage(gi109289975)     1.01e-68            MDFVATYQKIRINTNHKQFTCNHLGEIWGKENDDFKRFLLRVAFLQDNPEPKPWGAYSPQEKRLLHSFSLWLEQIADFQRVMKRESKLREKHINAPD
9971..10213                        PHAGE_Mannhe_phiMHaA1_NC_008201: hypothetical protein; AVJ80_RS09665; phage(gi109289976)     1.09e-53            MSLITVNDYKIKKDILDADGKPCYQLYQGEELLRDTTNLSEIIAYMFIRAEDKPFDELYNHIINQEAGAKTDIKFTVTVR
10210..10542                       PHAGE_Mannhe_phiMHaA1_NC_008201: hypothetical protein; AVJ80_RS09670; phage(gi109289977)     9.61e-79            MSQITKSAYTHIHPNWQAPRGNTYRIERYELKRRYALFCNGERVVLYKDPTHPNKNVESHIESDVLLLWLLKNELGWSGNIKEPLSPQDVENIRLLEQAFCLTYNGTFIK
10539..12899                       PHAGE_Mannhe_phiMHaA1_NC_008201: replication protein A; AVJ80_RS09675; phage(gi109289978)     0.0                 MNYQNEILSATEAFAIGVSLPPVAGASACALELHSDRLYQAFKQPYTSMVQQELFSKDPIHEPLRQSYFERLPRALAEHFGRQYKQKLHYQSQYDTADWFKAEMARKMPRIEAVISQYCDVFDFLKQSHQDLDFLAELDSNVYFGAGVDTQQAVQKIKQDAEVKGIQLPMHLCRLENSSRYLKAHGIRPLAYQTEEQIKQLALGIAYRVRQIQQDNIEQNMHKATDGDTAYSVLLECYRAMMGEVNKLKIDSPYQKKARKGRLTEEEITTGFLKMTCEKWWTRKLSKIAEQMKEHLAIACGMVNMLSPYCSNARLKAFEAQRKANIDYLKSMIIANIAEPEEQLSLFETWLKSASNPKIKRLELLTRMNGFERYADKQGHEGWFITLTAPSKYHAMLSRTSSVNPKWNGASPAETQVYLVNTWAKIRAKLNREGVMAYGFRVAEPHADATPHWHLILFTRPEDMEKLRRVFLSYALEVDGTEAGAKKYRCKFKRIEKEKGSATGYLVKYVSKNIDGFGMDGELSDEANIQAKENAARVGAWSSVWCIRQFQQLGNIPISLWRELRRLGSVEQEDETLEKLRVIADSGEWDVFTEELGGALVKRADLVARITYTERKSETGEALYTMYQEPSLKVSGIINIKNGVQINTRPKEWSIQLKPKNWEEQQLQKKLENATETERAEVKRKYYEKLGFNEEAIALLGELAPPWTCVSNCTGSKNNQISEEARNCLRNELITMRGRVTEHQIDDLLNGKRLKIWGNSQKTMFVSYSRGRLIEHIVDNYESFLN
12912..13244                       PHAGE_Mannhe_phiMHaA1_NC_008201: hypothetical protein; AVJ80_RS09680; phage(gi109289979)     2.23e-74            MVKFIRLNLINYFIEKDEYGEPVRCRAFRYDEIIQTKFIEGFREGEIPADDYGFEDWNGSVLILNEEGRKYFENYLFDVKKNYCRARDNYVYVLETLDEIEMKLGLLEAK
13244..13696                       PHAGE_Mannhe_phiMHaA1_NC_008201: single-stranded DNA binding protein; AVJ80_RS09685; phage(gi109289980)     3.96e-108           MNLVTLVGRLGQDPDIRTMQNGEKAAALSVATSEKWTDKQTGVKKESTEWHRVVLYRRLAEIAELYVKKGHLVSIIGKIKTRKWTDSNGVERSITEIIAEQMQMLSSGEKNTPNTPNKAENKPQPKQKNQDVMTADEQKDIPQFDDDIPF
13707..14039                       PHAGE_Mannhe_phiMHaA1_NC_008201: hypothetical bacteriophage protein; AVJ80_RS09690; phage(gi109289981)     7.80e-59            MREWEKQMPFSANLHIRPTGKFEVKNVNIEQIIGERGKNYGNFDDVATMSQQLKAVLLDTNTQLKPHQKEAGEMICLKLARIFAGCNPDYEDNWRDIAGYAVLGGKLNEK
14029..14298                       PHAGE_Mannhe_phiMHaA1_NC_008201: hypothetical protein; AVJ80_RS09695; phage(gi109289982)     1.14e-59            MKNKMGSKFIRVRVEHPQRKKEDIELVQDVVAYHIFNLFKFEESGLRGFSQYDLEIDVKVKPVLEQKEMPVDVWIDDLGGKNGTITSGQ
14273..14563                       PHAGE_Mannhe_phiMHaA1_NC_008201: hypothetical protein; AVJ80_RS09700; phage(gi109289983)     2.32e-66            MEQLQAVSNEQVFAKLCEVERLLKTKGVNEHSRELWDLGDVAAYFGYTKEHTSRSVVSSPHFPKPIALDGLRGKGRGAKKWVSGEVVKFCLMWKVK
14563..14780                       PHAGE_Mannhe_vB_MhS_535AP2_NC_028853: methyltransferase; AVJ80_RS13830; phage(gi971749623)     3.15e-11            MIKKIILDACCGSRMFHFNKHNPSVLFADNRESLYRKFMLSNTNLSMGIKAVNITKRIGWHLRWIITIICAA
complement(14833..15015)           PHAGE_Mannhe_phiMHaA1_NC_008201: hypothetical protein; AVJ80_RS09710; phage(gi109289984)     2.14e-34            MAMSRNEIQAKSEAKRGIKQKSFKLPLEVIAEIEVLSQKLNIPQNQLIIQAIQQFKQNNP
complement(15293..16291)           PHAGE_Mannhe_phiMHaA1_NC_008201: integrase; AVJ80_RS09715; phage(gi109289985)        0.0                 MATIIKNGNKYRAQVRKKGIYKTATFSTKTEANRWAYALEAQIDAGEYNTTPNILFAELIDKYLKEVTPTKRGKREERYRLLRIAGSNLGNIPLPALTKEHLRQWQNQRLQEVQPVSVSRERATLSALFTKAMEWDYLKENPLKTLEKIKTPPARTRRYSDEEIDKLIFVSGYSPNQPPLLMQQRAGAALLFAIETAMRAGEIAGLKWEHINLQARTAFLPQTKNGYSRTVPLSTKAIAILNQLAQLEPNKQNSVFQLTSRSLDSNFRKLKQKANLHNADLHFHDTRREALTRLSKYLTVMELAKVSGHRDLSILQNTYYNPDISELVSKLQ
complement(16519..16595)           tRNA                                                                                 N/A                 GCGACTATAGCTCAGTTGGTTAGAGCACCACCTTGACATGGTGGGGGTCACTGGTTCGAGTCCAGCTAGTCGCACCA
complement(16659..17459)           PHAGE_Salmon_SP_076_NC_021782: NinI protein; AVJ80_RS09725; phage(gi525972760)       2.20e-12            MATYIVGDLHGCFNEFQLLLEKVNYNPKQDELFLTGDLVARGEDSLACLRFVKDSANNAKTVLGNHDLHLLGIKRVKPNDKIDAIFEAKDRLDLQNWLRNQPLVIHHPKHQFLLTHAGISPEWDLATTLACAKEAEKVLQSDNYADYIAQMYENKPERWSEDLQGVERWRYIINVFTRMRFCYTDKRLDFDCKLPLEQAPQELLAWFDLDNPLFTQKNIIFGHWASLMGKCTRPNIYALDTGCAWGSHLTMLRWEDKQIFTQKRLK
complement(17551..19527)           PHAGE_Lactoc_Q54_NC_008364: putative ribonuclease; AVJ80_RS09730; phage(gi115304286)     1.98e-29            MFQNNPLLAQLKQQIEASKEYVAGVVKASDKAFGFLECDKKSYFIPPAEMKKVMHGDSVKAVVKRDGDKEQVEIDSLLEPMLDRFIAQVRLNKEGKLQLAVDHPSIKQTIPANTHKKATEKLENGDWVVAQLKTHPLRDDRFFFAQVTQFICKESDNFAPWWVTLARHEQPREPVANEKNYELHDELAREDLSHLYFTTIDSPSTQDMDDALFIEPIKQNGKRTGWRLVVAIADPTAYIPENSHIEKAARQRCFTNYLPGFNIPMLPRELSDDLCSLVPNEKRPALVGFIETDLNGNLIKETTFTSAWVESKDRLAYDDVSDYLEGVENAWQPQSEETKQQIEWLHQFTQARIQWRAENALLFKEQGDYTFELNEDGSVKDIHVEYRRIANQMIEESMILANICCAKFLSQHAKTGVFNTHSGFDPKNYELVKSFLLQTLASDENRDELAERYSAERLATLEGYCQMQRDIQDYPEKFLELRLRRYLTFAEFKAEVAPHFGLGITDYATWTSPIRKYGDMVNHRLIKQVLLGKQSQAVEESVLSRLQEARRQNRLVERDIADWLYARYLAPMVEQAVEFECEIADVSRGGLRAKVIKNGAQIFVPFSSLHDNKEEMEYRQEELALYIKGEKAYQIGQAVKVKLTEVRLETRSIVGNII
19687..19965                       PHAGE_Entero_lambda_NC_001416: Bor protein precursor; AVJ80_RS09735; phage(gi19263395)     2.35e-22            MKKLLAIATVFSLAACSTQTLELSPAKEAQYDRVQHFFVSGLAQKQEIDAAKICNGADKVGKVETETTFFNGLLGTITYGIYSPRQIRVYCN
19990..20286                       PHAGE_Entero_933W_NC_000924: Bor protein precursor; AVJ80_RS09740; phage(gi9632515)     6.20e-15            MKKLLAMSVLTALLTTACTTQTAHIGGKVTDNIKPTKSVTQSFFIGGIGQEETLNVVEVCGSKDKVQQVETVLSGGDILLGLVTIGIYTPRTANVYCK
22754..22767                       attR                                                                                 N/A                 AGCGGTTATTTTTT
