gi|00000000|ref|NZ_PZLS01000004.1|  Salmonella enterica subsp. enterica serovar Typhi strain ST45 250327, gc%: 51.07%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

#### region 1 ####
175932..175943                     attL                                                                                 N/A                 ATTTTAAAAATT
176213..177362                     PROPHAGE_Escher_MG1655: IS3 transposase B; DA357_RS06955; phage(gi16128284)          3.79e-18            SalmonellaentericasubspentericaserovarTyphiMTKAASTTKKPCKQHTPEFRDEALKLANALGWLRLPASLTCMNRSSTTGEENSKISSLLLNANRRCPQRSSVSINWQNGMRNLFSRRSRHTSRNANEVCLHRKTSGVQYQSHVPCTSGCPWLVRLASASSSDKPASAVPPCLRRPGGIQRKQRYGAPRLTDELRAQGRVYTVAASLRRQALRAKASRKISPVSYREHGLPVQRICSRTFTSVARIRNGWVTSCIFAPVKAGFIWPWLLTCGRSQPLAGLCPRGRHSLPAMHYTRCGGVNDRKSHHIYRQRQVLFSGLPELTETASAGQDERQRLLLRCLCGKLLPHAEGGMYAWRGLCQPGNNAGSSVLYVRLQSLASPQCLWRSQSGTIKPEPRLA
complement(177394..177534)         PROPHAGE_Escher_CFT073: putative prophage integrase; DA357_RS06960; phage(gi26250313)     9.12e-19            SalmonellaentericasubspentericaserovarTyphiMALTDIKVRTTKPSDKPFKLTDGQGMHLLINPNGSKYWQLQYRFGGK
177729..177742                     attL                                                                                 N/A                 CGAAGGCCGGACTC
complement(178271..180604)         PHAGE_Entero_P4_NC_001609: DNA primase; DA357_RS06965; phage(gi9627512)              0.0                 SalmonellaentericasubspentericaserovarTyphiMKMNVTETVKQACGHWSRILPALGVKVIKNRHQACPVCGGSDRFRFDDKEGRGTWFCNQCGAGDGLKLVEKVFGVSASEAAGKVDAVTGNLPPVALEVIAAAEAETEADRKAAAALAVKLMEKTRPASGNAYLTRKGFPGHECVMLTATHKTGGVTFRAGDMVVPLYDNAGALVNVQLINSDGLKRTLKGGAVKGACHTIEGKKQAGKRLWVAEGYATALTVHHLTGETVMVALSSVNLLSLASLARQKHPACQIVLAADRDLNGNGQSKAAAAADACEGIVALPPVFGDWNDAFMQKGEEATRKAIYDAIRPPADSPFTTMSEAEFTAMSTSEKAMRVHEHYGEALAVDANGQLLSRYEAGIWKIIPPSDFARDVAGLFQRLRAPFSSGKIASVVETLKLIIPQQDAPARRLIGFRNGVLDTATGTFSPHHKSHWLRTLCDVDFTSPVEGETLETHAPHFWRWLDRAAGGKPEKRDVILAALFMVLANRYDWQLFLEVTGPGGSGKSILAEIATMLAGEDNATSATIETLESPRERAALIGFSLIRLPDQEKWSGDGAGLKAITGGDAVSVDPKYKDAYSTHIPAVILAVNNNPMRFTDRSGGVSRRRVIIHFPEQIAPEERDPQLRDKIARELAIIVRQLMQKFSDPMTARTLLQSQQNSDEALSIKRDADPTFDFCGYLEMLPQTNGMFMGNASIIPRNYRKYLYHAYLAYMEANGYRNVLSLKMFGLGLPMMLKEYGLNYEKRHTKQGIQTNLSLKEESYGDWLPKCEEPAAT
complement(180619..180939)         PHAGE_Entero_P4_NC_001609: hypothetical protein; DA357_RS06970; phage(gi9627513)     1.56e-66            SalmonellaentericasubspentericaserovarTyphiMKNPLPPVLRAALYRRAVACAWLTLCERQHRYPHLTLDALESAIAAELEGFYLRQHGEEKGRQIACALLEDLIEAGPLKAAPSLSFLGLTVMDELCARHITAPVLH
complement(180936..181163)         hypothetical protein; DA357_RS06975                                                  N/A                 SalmonellaentericasubspentericaserovarTyphiMRHTTITARDLECLEHMRNVGQLVNELMQVQDCATVRRDPVQQSQLTSVIYLMTAQLDGVVERCNQRWLTGEGNV
complement(181160..181711)         PHAGE_Entero_P4_NC_001609: putative CI repressor; DA357_RS06980; phage(gi9627516)     1.80e-47            SalmonellaentericasubspentericaserovarTyphiMMMTIQQTAPFSGLLLFIVSRYSFPAVAKSAAGRGNPSNLTATPDAPCVFFCVYALVHLLLAQWFHDLCSYRVMVAQAGPTSVGPVSVRAGISTPVWATTTERGNSGGSITCYLTEVALMATILTPSYPQFVFVFAAVRRADRKPRICMLRTVAGDEQAARLSLVRDYVLSFAGRLPVAEVRA
complement(181644..181967)         PHAGE_Entero_P4_NC_001609: transcriptional regulator; DA357_RS06985; phage(gi9627517)     4.20e-36            SalmonellaentericasubspentericaserovarTyphiMHTAFSSPSSAPAAPLMPVSDTVHERFIRLPEVMHLCGLSRSTIYDLISREAFPKQISLGGKNVAWAQSEITAWMTDRIATGVMTHDDDHSANSPFFWLASFYRFQV
182507..183250                     PHAGE_Entero_P4_NC_001609: head size determination protein sid; DA357_RS06995; phage(gi9627518)     6.31e-20            SalmonellaentericasubspentericaserovarTyphiMKPELIIKSMQTVISKQDEGAEQRIAGALVALNEAKDAHTASMGKLSDIEASIQRCEQERQTALSESAQAEQDWRSRFRTLRGNLTPELKAEHSKRIASRELADEFTGLITELEKDKSLAMLGACSSGTAYISAHEKAFTTYANSEWKKALAGISPALLRAFLLRIRSLEMSGETSLRATVTRELGDALNMQSALYHFDMEQEPVLSVTGMNRPVITGVDMALLRSPARRMKLAAELAAKDHEQAEG
183254..183493                     PHAGE_Klebsi_ST147_VIM1phi7.1_NC_049451: hypothetical protein; DA357_RS07000; phage(gi100036)     1.10e-19            SalmonellaentericasubspentericaserovarTyphiMFHCPFCKKTAHVRTSRYLSENVKQRYHQCTNIECSATFRTIESVDGVIRAAPEKPDPAPVTPPPPRKVQGCYSSPFRH
183509..184075                     PHAGE_Entero_P4_NC_001609: amber mutation-suppressing protein; DA357_RS07005; phage(gi9627520)     1.18e-78            SalmonellaentericasubspentericaserovarTyphiMTTVTIQQAFEACQTNKNTWLKRKAELADLEREYREQLLAGDEQIPRRMQDLRDNIDVKKWEINQAAGRYIRSHEEVQHISIRNRLHDFMQQHGAELAATLAPELMGYHEQIPAVKQSAMQHSVDYLREALSVWLAAGEKINYSVQDNDMLTTIGFRPDAASRDDNREKFTPAQNLIYTRRRAELATR
184351..185514                     PHAGE_Plankt_PaV_LD_NC_016564: protein phosphatase; DA357_RS07015; phage(gi371496161)     9.86e-38            SalmonellaentericasubspentericaserovarTyphiMFTERLARWLARSSAKSGINRPEDLNAVLSTDIGLVRAENQDLIAAIRVNTPSNVGNPFFAMALLDGMGGMQDGKQCATIALSTLFYSLIKFRSDPPESRLLKATLEANSVVYDYAKGHGGSTLSAVIIENGSAPVIVNVGDSRIYSFSLDCGLTAISSDDSLEALGGRGRGLLQFIGMGESIKPHINILDKNHKNIILTSDGTHFISHSAFEELLSHSSDFSTSAQRIAQYVQWCGAKDNASFGIINCNDIENSLNSHKDIGVELWDPHGNLHIMWMKNYPAAQNYFSQNIVDDQDKEPSPIIDDDGFENKKTLNNPSTKNLELDSETPQRELFSNESPEKSQDPSITSKAIKQRKNKDKKKAIEKIKKDQSVMINIKDEENKNED
185504..186562                     PHAGE_Plankt_PaV_LD_NC_016564: protein kinase; DA357_RS07020; phage(gi371496162)     2.49e-64            SalmonellaentericasubspentericaserovarTyphiMKINHVLPERYSLKSTELGGGMGDILICKDNHLDRDVIVKLLKDGEEERRLLDEQKALLKLRSKHVVQLYDLIDITVSEKTKKGLVLEYINGVDLNYNPSESHPEKLKKLWQIACGLSDIHSAKVIHRDIKPNNIRVDENKIVKILDFGLARTSGTEAFTHSVIGTLGYMAPELWKRKNISFDQKIDVYAYGVLVLDLFGIEKPDELYEHPPAAITNIPELGKILPKDLARTFISCLSHDKYARPAMSSVRDQIAKYLLKDRHRALFVLNGKKYEINAKNKSVTITWGTSGSMEIVYDGFDFKVGNFSGSATINNQQVITNKVFPSCSVITLINEKSRSFVTFDISRPEVIS
186559..187635                     PHAGE_Plankt_PaV_LD_NC_016564: protein kinase; DA357_RS07025; phage(gi371496162)     1.74e-13            SalmonellaentericasubspentericaserovarTyphiMIEVGRIIAERYKILSYVGKGGMQDVYKVLDLKLDLDLALKTPLPGLESKRFLKSAKIAAKINHHNIAKTFDYVEDNGNIFLAEEFVEGENLEEKLRHFDFLDPHYGACILHNLAKGIMASHKADVIHRDLKPSNVMVSGGVQISNLKITDFGIATLTQELFDEAAASGDLTRSTSGTIKGALPFMSPELMFGKKGKPIEASTDIWPLGAMMFKLLTGDYPFGVYLDAAVNVKTKNRMEWPTFMTANPQYQSLSQDLQKIVDKCLSYDSDKRPTAETLVKACETLCYLSEERHVGRVNNLIQGGISGFIDGTPSNSFFSMESVYGSRYPNTSTRNTVCYSTFDGHPWPRAHPVILWKD
complement(187698..188963)         PHAGE_Entero_P4_NC_001609: integrase; DA357_RS07030; phage(gi9627511)                0.0                 SalmonellaentericasubspentericaserovarTyphiMKLNARQVETAKPKDKTYKMADGGGLYLEVSAKGSKYWRMKYRRPSDKKEDRLAFGVWPTVTLAQARAKRDEAKKLLVQGIDPKTEQKEAQAENSGAYTFETIAREWHASNKRWSEDHRSRVLRYLELYIFPHIGSSDIRQLKTSHLLAPIKKVDASGKHDVAQRLQQRVTAIMRYAVQNDYIDSNPASDMAGALSTTKARHYPALPSSRFPEFLARLAAYRGRVMTRIAVELSLLTFVRSSELRFARWDEFDFDKSLWRVPAKREEIKGVRYSYRGMKMKEEHIVPLSRQAMVLLEQLKQISGDKELLFPGDHDATKVMSENTVNSALRAMGYDTKTEVCGHGFRTMARGALGESGLWSDDAIERQLSHSERNNVRAAYIHTSEHLDERRLMVQWWADYLDIIQYEHITPYEYARVCNIK
189133..189146                     attR                                                                                 N/A                 CGAAGGCCGGACTC
201217..201228                     attR                                                                                 N/A                 ATTTTAAAAATT
