gi|00000000|ref|NZ_QAVG01000011.1|  Salmonella enterica subsp. enterica serovar Typhi strain 1099_07 144867, gc%: 50.89%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

#### region 1 ####
70419..70430                       attL                                                                                 N/A                 ATTTTAAAAATT
70700..71849                       PROPHAGE_Escher_MG1655: IS3 transposase B; DBK30_RS12435; phage(gi16128284)          3.79e-18            SalmonellaentericasubspentericaserovarTyphiMTKAASTTKKPCKQHTPEFRDEALKLANALGWLRLPASLTCMNRSSTTGEENSKISSLLLNANRRCPQRSSVSINWQNGMRNLFSRRSRHTSRNANEVCLHRKTSGVQYQSHVPCTSGCPWLVRLASASSSDKPASAVPPCLRRPGGIQRKQRYGAPRLTDELRAQGRVYTVAASLRRQALRAKASRKISPVSYREHGLPVQRICSRTFTSVARIRNGWVTSCIFAPVKAGFIWPWLLTCGRSQPLAGLCPRGRHSLPAMHYTRCGGVNDRKSHHIYRQRQVLFSGLPELTETASAGQDERQRLLLRCLCGKLLPHAEGGMYAWRGLCQPGNNAGSSVLYVRLQSLASPQCLWRSQSGTIKPEPRLA
complement(71881..72021)           PROPHAGE_Escher_CFT073: putative prophage integrase; DBK30_RS12440; phage(gi26250313)     9.12e-19            SalmonellaentericasubspentericaserovarTyphiMALTDIKVRTTKPSDKPFKLTDGQGMHLLINPNGSKYWQLQYRFGGK
72216..72229                       attL                                                                                 N/A                 CGAAGGCCGGACTC
complement(72757..75089)           PHAGE_Entero_P4_NC_001609: DNA primase; DBK30_RS12445; phage(gi9627512)              3.64e-90            SalmonellaentericasubspentericaserovarTyphiMKMNVTETVKQACGHWSRILPALGVKVIKNRHQACPVCGGSDRFRFDDKEGRGTWFCNQCGAGDGLKLVEKVFGVSASEAAGKVDAVTGNLPPVALEVIAAAEAETEADRKAAAALAVKLMEKTRPASGNAYLTRKGFPGHECVMLTATHKTGGVTFRAGDMVVPLYDNAGALVNVQLINSDGLKRTLKGGAVKGACHTIEGKNRRENACGLRRAMRPRSPYITPGKPSWWRCPPTYFLWRALPVRNTRPVRLSSPPTVTLTATARVKPLRPQTPARALSPCRRCSVTGMMRLCRKVKRPRGKPFMTPSGLRLTALSLPAKRNLPPAPVKRQCGCMNITAKRWPWMRTASSCPDMRQEYGKSFPRRILPATWPGCFSVCAPRSRRGKLPQWWRPNLFRSRTHRRAVLVFVTGYSIPPPALSARTTNRTGCARYVMLISPHRWRAKRWKPTPLISGAGLTALPVANRKNAMFWPRCLWFWRTVTTGSSFSKSPAPAGAEKVFWPKLRPCLPGKITPRRPPSKRWNHPANALRLASLYDCLTRKNGAVTGQDSRPSPAGMRSPLTRNTRMRTPPIFQRFWPTITRCALPTAAVVYRAAGLFTSRSRLPRRNATRSSGIKLRASWPSLCVSLCRSSATRQRAHCSSHSRTPTRHSVSSAMLTRRLIFAAIWKCSRRPTGCLWVMPVLSRVITVNIFITRIWPIWRLTGTGTCSAKCSGWGCPCKNTAIMRSGTQSRGYKPICRKRKATATGCRNARNPQQHAA
complement(75104..75424)           PHAGE_Entero_P4_NC_001609: hypothetical protein; DBK30_RS12450; phage(gi9627513)     1.56e-66            SalmonellaentericasubspentericaserovarTyphiMKNPLPPVLRAALYRRAVACAWLTLCERQHRYPHLTLDALESAIAAELEGFYLRQHGEEKGRQIACALLEDLIEAGPLKAAPSLSFLGLTVMDELCARHITAPVLH
complement(75421..75648)           hypothetical protein; DBK30_RS12455                                                  N/A                 SalmonellaentericasubspentericaserovarTyphiMRHTTITARDLECLEHMRNVGQLVNELMQVQDCATVRRDPVQQSQLTSVIYLMTAQLDGVVERCNQRWLTGEGNV
complement(75645..76196)           PHAGE_Entero_P4_NC_001609: putative CI repressor; DBK30_RS12460; phage(gi9627516)     1.80e-47            SalmonellaentericasubspentericaserovarTyphiMMMTIQQTAPFSGLLLFIVSRYSFPAVAKSAAGRGNPSNLTATPDAPCVFFCVYALVHLLLAQWFHDLCSYRVMVAQAGPTSVGPVSVRAGISTPVWATTTERGNSGGSITCYLTEVALMATILTPSYPQFVFVFAAVRRADRKPRICMLRTVAGDEQAARLSLVRDYVLSFAGRLPVAEVRA
complement(76129..76452)           PHAGE_Entero_P4_NC_001609: transcriptional regulator; DBK30_RS12465; phage(gi9627517)     4.20e-36            SalmonellaentericasubspentericaserovarTyphiMHTAFSSPSSAPAAPLMPVSDTVHERFIRLPEVMHLCGLSRSTIYDLISREAFPKQISLGGKNVAWAQSEITAWMTDRIATGVMTHDDDHSANSPFFWLASFYRFQV
76992..77735                       PHAGE_Entero_P4_NC_001609: head size determination protein sid; DBK30_RS12475; phage(gi9627518)     6.31e-20            SalmonellaentericasubspentericaserovarTyphiMKPELIIKSMQTVISKQDEGAEQRIAGALVALNEAKDAHTASMGKLSDIEASIQRCEQERQTALSESAQAEQDWRSRFRTLRGNLTPELKAEHSKRIASRELADEFTGLITELEKDKSLAMLGACSSGTAYISAHEKAFTTYANSEWKKALAGISPALLRAFLLRIRSLEMSGETSLRATVTRELGDALNMQSALYHFDMEQEPVLSVTGMNRPVITGVDMALLRSPARRMKLAAELAAKDHEQAEG
77739..77978                       PHAGE_Klebsi_ST147_VIM1phi7.1_NC_049451: hypothetical protein; DBK30_RS12480; phage(gi100036)     1.10e-19            SalmonellaentericasubspentericaserovarTyphiMFHCPFCKKTAHVRTSRYLSENVKQRYHQCTNIECSATFRTIESVDGVIRAAPEKPDPAPVTPPPPRKVQGCYSSPFRH
77994..78560                       PHAGE_Entero_P4_NC_001609: amber mutation-suppressing protein; DBK30_RS12485; phage(gi9627520)     1.18e-78            SalmonellaentericasubspentericaserovarTyphiMTTVTIQQAFEACQTNKNTWLKRKAELADLEREYREQLLAGDEQIPRRMQDLRDNIDVKKWEINQAAGRYIRSHEEVQHISIRNRLHDFMQQHGAELAATLAPELMGYHEQIPAVKQSAMQHSVDYLREALSVWLAAGEKINYSVQDNDMLTTIGFRPDAASRDDNREKFTPAQNLIYTRRRAELATR
78836..79999                       PHAGE_Plankt_PaV_LD_NC_016564: protein phosphatase; DBK30_RS12495; phage(gi371496161)     1.18e-37            SalmonellaentericasubspentericaserovarTyphiMFTERLARWLARSSAKSGINRPEDLNAVLSTDIGLVRAENQDLIAAIRVNTPSNVGNPFFAMALLDGMGGMQDGKQCATIALSTLFYSLIKFRSDPPESRLLKATLEANSVVYDYAKGHGGSTLSAVIIENGSAPVIVNVGDSRIYSFSLDCGLTAISSDDSLEALGGRGRGLLQFIGMGESIKPHINILDKNHKNIILTSDGTHFISHSAFEELLSHSSDFSTSAQRIAQYVQWCGAKDNASFGIINCNDIENSLNSHKDIGVELWDPYGNLHIMWMKNYPAAQNYFSQNIVDDQDKEPSPIIDDDGFENKKTLNNPSTKNLELDSETPQRELFSNESPEKSQDPSITSKAIKQRKNKDKKKAIEKIKKDQSVMINIKDEENKNED
79989..81047                       PHAGE_Plankt_PaV_LD_NC_016564: protein kinase; DBK30_RS12500; phage(gi371496162)     2.49e-64            SalmonellaentericasubspentericaserovarTyphiMKINHVLPERYSLKSTELGGGMGDILICKDNHLDRDVIVKLLKDGEEERRLLDEQKALLKLRSKHVVQLYDLIDITVSEKTKKGLVLEYINGVDLNYNPSESHPEKLKKLWQIACGLSDIHSAKVIHRDIKPNNIRVDENKIVKILDFGLARTSGTEAFTHSVIGTLGYMAPELWKRKNISFDQKIDVYAYGVLVLDLFGIEKPDELYEHPPAAITNIPELGKILPKDLARTFISCLSHDKYARPAMSSVRDQIAKYLLKDRHRALFVLNGKKYEINAKNKSVTITWGTSGSMEIVYDGFDFKVGNFSGSATINNQQVITNKVFPSCSVITLINEKSRSFVTFDISRPEVIS
81044..82120                       PHAGE_Plankt_PaV_LD_NC_016564: protein kinase; DBK30_RS12505; phage(gi371496162)     1.74e-13            SalmonellaentericasubspentericaserovarTyphiMIEVGRIIAERYKILSYVGKGGMQDVYKVLDLKLDLDLALKTPLPGLESKRFLKSAKIAAKINHHNIAKTFDYVEDNGNIFLAEEFVEGENLEEKLRHFDFLDPHYGACILHNLAKGIMASHKADVIHRDLKPSNVMVSGGVQISNLKITDFGIATLTQELFDEAAASGDLTRSTSGTIKGALPFMSPELMFGKKGKPIEASTDIWPLGAMMFKLLTGDYPFGVYLDAAVNVKTKNRMEWPTFMTANPQYQSLSQDLQKIVDKCLSYDSDKRPTAETLVKACETLCYLSEERHVGRVNNLIQGGISGFIDGTPSNSFFSMESVYGSRYPNTSTRNTVCYSTFDGHPWPRAHPVILWKD
complement(82183..83448)           PHAGE_Entero_P4_NC_001609: integrase; DBK30_RS12510; phage(gi9627511)                0.0                 SalmonellaentericasubspentericaserovarTyphiMKLNARQVETAKPKDKTYKMADGGGLYLEVSAKGSKYWRMKYRRPSDKKEDRLAFGVWPTVTLAQARAKRDEAKKLLVQGIDPKTEQKEAQAENSGAYTFETIAREWHASNKRWSEDHRSRVLRYLELYIFPHIGSSDIRQLKTSHLLAPIKKVDASGKHDVAQRLQQRVTAIMRYAVQNDYIDSNPASDMAGALSTTKARHYPALPSSRFPEFLARLAAYRGRVMTRIAVELSLLTFVRSSELRFARWDEFDFDKSLWRVPAKREEIKGVRYSYRGMKMKEEHIVPLSRQAMVLLEQLKQISGDKELLFPGDHDATKVMSENTVNSALRAMGYDTKTEVCGHGFRTMARGALGESGLWSDDAIERQLSHSERNNVRAAYIHTSEHLDERRLMVQWWADYLDIIQYEHITPYEYARVCNIK
83618..83631                       attR                                                                                 N/A                 CGAAGGCCGGACTC
95702..95713                       attR                                                                                 N/A                 ATTTTAAAAATT
