gi|00000000|ref|NZ_QPAA01000042.1|  Clostridioides difficile strain 2 Scaffold40_1, whole genome 5004, gc%: 27.52%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
complement(29..1387)               PHAGE_Clostr_phiCD27_NC_011398: putative phage site-specific recombinase; DR993_RS19990; phage(gi209901279)     0.0                 ClostridioidesdifficileMLRVALYIRVSTEEQALNGDSIRTQIEALEQYSKENDFNIVGKYIDEGCSATNLKRPNLQRLLRDVEKDKVDLVLMTKIDRLSRGVKNYYKIMETLEKHKCDWKTILENYDSSTAAGRLHINIMLSVAENEAAQTSERIKFVFQDKLRRKEVISGTIPIGYKIENKHLVIDKEKKYIVKAIFDEYEKSGSVRTLIETINNLHGELYSYNKIKNILRNELYIGIYNKRGFYVEDYCEPIISKKQFKQIQRILEKNKKTTPNKNIHYHIFSGLLKCKECGYTLKGNSSNVGEKLYLSYRCSTFYLNKNCVHNVTHNEKHIENYLLTNLKPQLHKHMVKLEAQNEKIRRNKKSNKKDEKKKIMKKLDKIKDLYLEDLIDKETYRKDYEKLQSQLDNITEEQESQIIDTSHIKKFLDIDINEMYSDLSRVERRRFWLSIIDYIEIDNNKNITINFI
complement(1452..1925)             PHAGE_Clostr_phiCD27_NC_011398: hypothetical protein; DR993_RS19995; phage(gi209901280)     8.52e-111           ClostridioidesdifficileMNSYEKLLSEADDNNIIVREVPLISNSHGLYKNNRIALNKNTLNNISEKACVLAEELGHHYTSYGNILDLNKVENSKQEYKARLMAYNKLIGLKGIIDSFNAGCKTITEMAEYLDVTEKFLNEALECYKSKYGFSATLDNYVIFFEPRFSIMNANFL
complement(1943..2398)             PHAGE_Clostr_phiCD27_NC_011398: putative phage repressor; DR993_RS20000; phage(gi209901281)     7.93e-107           ClostridioidesdifficileMNTENDLKMLEITNRIKNKRLELNMSYQDLANKTGLSKSTLQRYETGAIKNIPLDKLEILAHALDESPAFIMGWNEDCKQIKIKENKLLSSFNALNDIGQNEAIKRVDELTQIGKYVNKNHIDTIAAHNEHLHEEGEIEKIYQDLDDMDNW
2552..2773                         PHAGE_Clostr_phiCD27_NC_011398: putative phage repressor; DR993_RS20005; phage(gi209901282)     7.08e-46            ClostridioidesdifficileMNISKLKGKMVEKKYTQKKLAEELGMTVQALNAKLNNRSQFKIEEAVKISNILQIEEPGEIFFDNYIPKMQRN
2821..3615                         PHAGE_Clostr_CDMH1_NC_024144: putative anti-repressor protein; DR993_RS20010; phage(gi640884902)     4.42e-171           ClostridioidesdifficileMSNNLQVIERNNKRVLTTQQLADVYETDSKNISNNFNNNKDRFIEGKHYFLLQGDDLKNFKGIHTEYENLKFASKMYLWTERGANRHCKILDTDKAWEQFDNLEETYFKVKQQKPTCIEDVLIESLKEMKDLRLQVNQANNIALEAKTEVKTIKEVVSLNATDWRKDTQQLIAKIAKKQGGFEHINMLRRESYELLNNRFGVDLNRRLINKRRKMAEEGVSESKREKVNNLDVIQDDKKLIEGYVAIVKDMALKYGISSDLSKN
3681..3869                         PHAGE_Clostr_phiCD27_NC_011398: hypothetical protein; DR993_RS20015; phage(gi209901287)     1.61e-37            ClostridioidesdifficileMGKKSEYTVTTVGEPNLDALGETLAKILTEKFGVLITHTYIENYYVDKERGGDVDGAIESEL
3844..4071                         PHAGE_Clostr_phiCD27_NC_011398: hypothetical protein; DR993_RS20020; phage(gi209901288)     2.31e-34            ClostridioidesdifficileMELLKVNFNLEKLKIGNVVSVSSKRFGFNINCIVVVATEEELNLAYYSKDKGCIEYQALIPEDIRYGDYILERLG
4171..4488                         PHAGE_Clostr_phiCD27_NC_011398: hypothetical protein; DR993_RS20025; phage(gi209901289)     2.44e-68            ClostridioidesdifficileMESLKIVKQYVEGQLNLSSLEIDKNKETYEILKNKSSRDMLDDINLNDALREVTVNERLKIFAESLLELLDTQIKIKESEESEDYKRLCMYLDEFGRDRPIDVQI
4574..5004                         PHAGE_Clostr_phiCD27_NC_011398: hypothetical protein; DR993_RS20030; phage(gi209901290)     1.22e-92            ClostridioidesdifficileMSTLYELTTDLLEIEEGLTEITGNEAEKLEEIKEIIKQEIQNKNTRIVSVIIDIDSDINSLDLEIKRMQELKKIKKNSLDRLKSNIKECMELLGIKKVETFLGNISIRKSAGSLVIEDEEKIPAIYKTVEQVVKVDKNTIKDF
