gi|00000000|ref|NZ_QPKR01000001.1|  Listeria sp. SHR_NRA_18 NODE_1_length_838373_cov_28.0123, whole 838373, gc%: 43.49%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
740957..740968                     attL                                                                                 N/A                 TTTTTCATTATC
complement(740974..741867)         PHAGE_Mycoba_Butters_NC_021061: integrase; DUK53_RS03685; phage(gi479336499)         1.74e-23            ListeriaspSHR_NRA_18MDDLILDFLHFLQVEKGLSANTLVAYERDLRFFARYLEEEQGALAIRDVERIHIVSFMAYAKLEEKSPRTIARYIASLRSFFHFLLHEKLADRDPMIQIETPKQAQALPKILNLNDVEKLLEAPNGANPLGMRDQAMLEVLYATGLRVTELVHLQMDDLHLQMGFIQTIGKGDKERIIPLGKTATTVLERYLEFGRPKLRRVSERNDFVFLNHHGRGMTRQGFWKNLKQIAAKAGIDKPITPHTLRHSFATHLLENGADLRSVQELLGHADISTTQIYTHVTKARLKDVYKQYHPRA
complement(742194..742649)         transcriptional repressor; DUK53_RS03690                                             N/A                 ListeriaspSHR_NRA_18MEGRIQRIKSQLHEASYKLTPQREATVRILLENEKDHLSAEDVYLRVKDISPDIGLATVYRTLELLTELRVVDKINFGDGVARYDLRKEGAKHFHHHLVCLECGSVEEIQEDLLDDVEKIVEQKWDFLVKDHRLTFQGICTVCKSNIKKAE
complement(742862..743884)         iron ABC transporter permease; DUK53_RS03695                                         N/A                 ListeriaspSHR_NRA_18MMGTTTEQKVTRKRWLILILLAILLVGTFVYSVNAGFSKIPFLDVIKTLFGQGSPQDTLIISQFRLPRIIVAVLVGAGLAISGALLQAVSQNSLADPGILGINNGAGLAVMLYISYFPSTLDVPVMFMPFVGFTGAILTAFVVYGLSYSRQEGLLPNRLVLTGVAVSAAVAALMTLLTIRLDPENYQIVAEWLAGNIWASNWQYVFALIPWLIVLVGVAMFKIKTLDILGFGDQVATGLGVKTEKEKVILLLVAVALAAACVSVSGGIAFIGLIGPHIARRLVGSGHKWVLPISALVGALLLLVADTIGRIIVQPSEIFAGIVVAVIGAPYFLYLLARTK
complement(743884..744909)         iron ABC transporter permease; DUK53_RS03700                                         N/A                 ListeriaspSHR_NRA_18MKTKELSQLKTRPAMATVILTAGVALLIVSAFIGIAVGAADIDIATVWDALFHYNKSLTTHQIIWELRIPRVLADMMVGAAFAVAGAVMQGMTRNPLADSGLLGLNAGSAFMIAVCFAFLPGLSYNYLIFFSFLGAALGCVLVFGVSALVKGGLSPTRLVLAGAAVASLLTALSEGIAIYFKLSQDLAFWFAGGVAGVKWSQIAVVWPWLIGALIAAMLLSKAVTILSLGDDIAIGLGQNTTRTKLLSMLVVLILAGLAVSVVGPVGFIGLIVPHLVRYMVGVDYRWIIPCSAIVGALLTLYADIGARMVNPPYETPISVIFALIGVPFFLYVARKERRSL
complement(745018..745950)         iron-hydroxamate ABC transporter substrate-binding protein; DUK53_RS03705            N/A                 ListeriaspSHR_NRA_18MKKIVFLMLTAVMAVVLVGCGSDEAAEGKSETHAYKMPNGKTVEIPNNPKKIVVTEYMGSLSALGIKPIGATSFVLKNPYLNPYKKGVEDIGDPASVEKVAELQPDLIIVSGEDQFNQMKKIAPTILIPYNTYKSVQDELTAIAEIVGKEQEAKDWLADFDKKAAKAREKIKGVVAPNATVGLYEGDDKNFYVFGDNWGRGGQVLYNALQLKAPKKIQDEVIDGDGYKQISLEVLPDFAADYMFVTRFKHGDTRNGALDGIEASSIWKDLPAYKANHIFTMDFDEMYNYDPIAVEGQMDLIVNKIVNSNK
746153..746998                     PHAGE_Plankt_PaV_LD_NC_016564: ABC transporter; DUK53_RS03710; phage(gi371496158)     6.78e-14            ListeriaspSHR_NRA_18MNNLKTDGLQIAYDKRVIVDALNIEIPKGKITALVGANGSGKSTILKTMSRLMKPSKGNVFLDGKAIHRQSTKEIAKQLAILPQNPTAPDGLTVTELVSYGRSPHQSGFKSMSVKDRDMIQWALRVTSLNDFADRPIDSLSGGQRQRAWIAMALAQETDILFLDEPTTFLDMTHQLEVLMLLKQLNLQENRTIVMVVHDLNHASRFADHMIAIRSGQVISEGSPVDVMTEQTLEDVFGIKADIMLDPRTGVPLCLPYETCQACEIRQVATKLAGEVVVKLV
746982..747980                     PHAGE_Bacill_G_NC_023719: gp344; DUK53_RS03715; phage(gi593777800)                   3.18e-10            ListeriaspSHR_NRA_18MSNLYDVTIIGAGPVGLFTTFYSGLRSLKTKIIDAEPAVGGKIRYFYPEKIIRDIGGIPAIEGQQLVKNLHDQAKTFQPTIVCGERITELNRLADGTFQLTAENGNKHHSKTVIIAAGSGTYEVHPLEVSGSETFASSLFYDIKNLASFQHKTVVVSGGGNAAIDWAQALEPIAKEVHLVYRGENFKGHEERVKEMHDSSICVHVNHEITALQGDSTHLKNCVIHCNKNGNTTKIDTDAIIVNHGVKVNLGSMLDWGFDTSEYGILVNQQMETSVPGIYACGDICTYPRKMRIIAAGLHEGPIAINSAKNFLDPAAEEVAMVSTHHESFTEV
complement(748037..748567)         hypothetical protein; DUK53_RS03720                                                  N/A                 ListeriaspSHR_NRA_18MMDDIAVVTKEQIIAELQQLAQEQGRVPRRSMYNHFEKARQLFGSWPDALKAAGLENEPKRFYKEDYLIAEVKRISQELGRPPISGPHEFPLYMSVMEYYDSWEAFLERAGLTKFAGEEEGKEVKEKLIRDILEMERIMRRFPTMSEFEDYRLVRYYFGSWKNFKVACEEKKQGVS
complement(748711..749316)         TetR/AcrR family transcriptional regulator; DUK53_RS03725                            N/A                 ListeriaspSHR_NRA_18MEDKRDKILKVAVEEFADHGYKAASTNRISEVAGVSKGLIFHYFGSKEKLYTAAVTYSVDLAMQEVPIGEIPTENFMEGAIWSTKQKLHFSKNYPAAFKLIMQSYANPPAALAERLHAYYTEMLQMQDVYMNQIFERVTLRADVVLEDAHDVIRALFDYTIKIATDYIRENPNATMQEMQPLVDKFMHMMAIVERGMIQKT
complement(749316..750131)         ABC transporter permease; DUK53_RS03730                                              N/A                 ListeriaspSHR_NRA_18MTILKIEWKTHIKSLLVWSGVVALVLGMFMAFFPSMQSSGMQELVNTKMNALPKEMMNVLHISSMADLTKIDAYFAYVFQYIFIAACVYAAMIGAQALVKEETDGTIEFLYAQPITRSELVAWKMVGNAISFIAFWAITFVVSTVLVVFLKQDGANTGDLVQSLVRVFSNELLVALLFMSAGFCFSAIVHSAKQATPVALGLVFLTYILGILAGLNDKVDFFKYFSPINFAIPSDMIKASMESVNVWISVISIVVFVVLTFVLYRKKDLRV
complement(750128..751018)         PHAGE_Plankt_PaV_LD_NC_016564: ABC transporter; DUK53_RS03735; phage(gi371496158)     3.99e-11            ListeriaspSHR_NRA_18MKAIETNELTKFYHKKRAIEGVNLSVEEGELFGFIGPNGAGKSTTIKLLLNFIYASKGHATILGKDIVKNSAEIKKMVGYVPSEVRYYPQMTANDIIGFAAKFHHIDQAQTQMKRYYEMFDIDPHKRFGDMSLGNKKKVAIVAGLITKPKLLILDEPTNGLDPLMQHHLFKEMTRQNQEDGMTIFLSSHNLREIQEYSTRAAFIREGEIVALENIADQEMSGKVIILKGDRLPVTELVNAGAKVVETTETSARLTFDGNVQAVLPILAAEGIKDLSITNQELEDKFMTLYEGGKAK
complement(751153..751584)         VOC family protein; DUK53_RS03740                                                    N/A                 ListeriaspSHR_NRA_18MKMTAVFLHFTGNCREALDYYAGIFEVEPKEIVTYGEAPSNPNTSGNKDGNADKIMYSEIDVRGLRVMMSDMPDGIPATLGDNVSIVVESDDLEDLKAIFAKFEKGSKIYMPLEETFWSKGYAMIADKFGTQWHFSYRDVLTK
complement(751601..752149)         PHAGE_Lactob_LP65_NC_006565: hypothetical protein; DUK53_RS03745; phage(gi56693134)     1.74e-20            ListeriaspSHR_NRA_18MDSLEEKTVKRETIFDGKIIKLVVDDVVLPNGATSKREIVKHPGAVAVVAITPENKMVMVEQYRKPLEKAIVEIPAGKIEPDEAPELTAGRELEEETGYKTDDLKHLVSFYTSPGFADELLHIYLAGDLKKQANPLQADEDEFVNIVEVSLDEALQLIEEKVICDAKTVYAVQYWQLLEATK
752354..752998                     5-bromo-4-chloroindolyl phosphate hydrolysis protein; DUK53_RS03750                  N/A                 ListeriaspSHR_NRA_18MVVFKKFMAFTGSIVLTLILFGILANIFVNNWLLISVVTLVVAAVLFFFSAKAGDKAHAIQTGLTKKEYKYIRTNLEESRAKILRLQKITSAHRNLFTFQERDKTLLLTKRIYGIVKEEPKRFYDAEDFFFSHLDSLVELTEKYAFLNSQPVKDKKIYQTLSDTRALLNDLGRVIEKDLFALLNKDVSSLDFELEVAKNSISKQEKKFERRTPK
752995..754227                     PHAGE_Pectob_CBB_NC_041878: toxic ion resistance protein; DUK53_RS03755; phage(gi100340)     1.78e-29            ListeriaspSHR_NRA_18MTENQKPNEPELKTTETPTYEQPKAEVIDANFNKTLDDLLADPFGTNGSQTVQEIVNNETDKAPRLVDMLPEANRRQAVELAKQIEPGNQAAILGYGAPAQAKLHDFSHSMLNQVQKQDVGPIGEIISDLMFRLQEADPDELAARNKNVFTKMFSRVKQSINEITSKYQKMGTQIDRIALKLEHAKKRLMEDNSFLEQLYDKNKDYFQALNIYIAAGELKQEEINTKLLPELRKKAEQSGDQMDFQEVNDLTQFADRLEKRVHDLKLSRQITIQQAPQIRLIQNTNQVLAEKIQSSIMTAIPLWKNQVAIALTLLRQQQAAEAQRQVSETTNELLKRNADMLKTNAIETARENERGIVDIETLKETQSSLIETLQETLKIQQEGRAKRAVAEKELVTMEQELKDRLLEMK
complement(754289..754831)         PHAGE_Bacill_SPbeta_NC_001884: hypothetical protein; DUK53_RS03760; phage(gi9630137)     2.57e-12            ListeriaspSHR_NRA_18MKRESGRIRPIRREDIQGMHVWELDEEIAMASGITKPRSLEVFQTMYEKYFFNVNQSLQLYSIVLDGRVIGRAELGLIDRENGQAAFGIVIGERSSWGKGYGKEAILELLDVAFNALHLHKVYCEVYTFNERSLNMMHSLGFHQDGILREHEFFHEAYHDLAVFSMLEAEFRTAFEKNSK
complement(754906..755976)         PHAGE_Cronob_ENT39118_NC_019934: DNA polymerase; DUK53_RS03765; phage(gi431811050)     9.60e-13            ListeriaspSHR_NRA_18MDKTRKIIHIDMDAFFASVEERDHPEYRGKALIIGGDPNKRGVVSTCSYEARKFGVHSAMPTKQAYKLCPHGIFIHGNMEHYREVSAQIREIFHRYTDLVEPMSLDEAYLDVTENKKGIKSAMKIALEIQHAIYHELGLTASAGVSYNKFIAKIASDFKKPAGMTVVLPEEAEAFLESLPVTKFHGVGKVTAEKLHRLGIHSGADLKAWEEWDLIRELNKQGYRLYRAVRGLSDSKVNPHRERKSVGRETTFANNIFDEREMQEMLLLFSQKIESSLERIGKHGKTVVLKLRYSDFSTITRRLSLMEYTRDARVIYDAGASLLRDVYSGEESVRLVGLTVTNLKPLHFENLKLEGF
complement(756295..757083)         PHAGE_Prochl_P_TIM68_NC_028955: hypothetical protein; DUK53_RS03770; phage(gi971760361)     7.89e-15            ListeriaspSHR_NRA_18MNDFLKGKTVMITGASNGLGAEMARQVAAQGAHTILTARRTEKLSDLATQIQADYGVVSDYHKMDMTDFEEIEDVMQKIGDTKIDVLVNCAGFGIFEEAVKTDFATVERMFDTNVLGLMRLTQLALPDMLARKSGHIINIASQAGKIATPKSSAYSATKFAVLGYSNALRMETKPSGIHVTTVNPGPIATSFFDIADKSGDYLDNVGFLVLKPEKVAAKIVAIMGKPKREINLPFLMNLISRMYQVMPRVIEFFGKGAFEKK
complement(757100..758014)         PHAGE_Bacill_vB_BanS_Tsamsa_NC_023007: hypothetical protein; DUK53_RS03775; phage(gi564292606)     1.87e-05            ListeriaspSHR_NRA_18MELIFLGTGAGVPSKGRNVTAIALTMLNERNSIWLFDCGEATQHQILRSSIRLSKLEKIFITHLHGDHIFGLPGLLSSRSFQGGETELTIYGPVGIANYIRTSLAVSGTHLKYPLEIVEIDSEVVFEDADFKVICRELDHGILSYGYRIEEADKAGSLDAEGLSALGVKPGPIFKELKEGKTVTLENGEVVDGSQFIGPAKKGRVMAIFGDTRTTANELVLADQADVIVHEATFGAEMGDMAGEYMHSTTIEAATLAKNANAKRLIITHISSRYSREDNRELVSECQAIFPNTEMATDFAIFEL
758330..759799                     PHAGE_Cyanop_Syn30_NC_021072: glucose 6-phosphate dehydrogenase; DUK53_RS03780; phage(gi481019600)     1.21e-100           ListeriaspSHR_NRA_18MTEVKEQVALITIFGGTGDLANRKLYPSLYHLFTKGFLKENFAVIGTARRPWTNDFFREKVVESLKGIEKEGFDPEEFASHFYYQSHDVTNRESYVELKDLSDELDKKYELQGNRLFYLAMAPNFFGTIASRLKSEGFVDNAGFSRLIIEKPFGRDLASAQELNESLRQAFDENEIYRIDHYLGKEMIQNISVIRFANSIIESLWNNRYIDNVQVTLSETLGVEDRGRYYEESGALRDMVQNHILQIVSLLAMEPPIKLTTQEIRHEKVRALRSLRVIEGDDVYKYFVRGQYGPGTVDGKELLGYRQAENVDSDSNTETFVAAKLMIDNFRWSGVPFYIRTGKRLAKKTTQIAIQFKNVPMNLFGPGQSLGGNVLVIHIQPDEGITLHMNVKEPGQGMLTMPVNLNYAHSSPDGMNTPEAYEKLIQDCLNGDATYFSHWDEVSLSWNFIDKVAAVWSNSKEHFPNYTSGTMGPKEADKLVSQDGFEWFE
761795..761806                     attR                                                                                 N/A                 TTTTTCATTATC
