gi|00000000|ref|NZ_QRWQ01000001.1|  [Ruminococcus] gnavus strain AF19-16AC AF19-16AC.Scaf1, whole 463412, gc%: 42.57%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
190682..190695                     attL                                                                                 N/A                 GCTTTTGTCAGTTT
complement(198347..199408)         PHAGE_Prochl_P_TIM68_NC_028955: putative zinc-containing alcohol dehydrogenase superfamily protein; DWX36_RS00930; phage(gi971760362)     1.34e-09            gnavusMKGYAMLKIGESGWIEKERPVCGPLDAICRPLAVAICTSDVHTLWEGAIGERHNMILGHECCAEVVEVGELVKDFKPGDRVLVPAITPDWNSLEAQAGYSMHSGGMLAGWKFSNFKDGVFSEFFHVNDADGNLALLPSNISTVDACMLSDMVPTGFHGVELADVQFGDTVLVIGIGPVGLMSVAGTALRGASRIIAVGTRKNCVEAAKLYGATDFVSYKNGTIEEQVLAMTDGKGVDKVVIAGGGCETFESAVKCLKPGGKIGNVNYLGSGTYVTVPRVEWGVGMGHKQINGGLMPGGRLRMEKLGALVAAGKLDVHPLASHVFEGWDHLEEALFMMRDKPADLIKPVVKISD
complement(199516..199926)         stage V sporulation protein AB; DWX36_RS00935                                        N/A                 gnavusMWTEQIVLGLIGLSSGVAVAGGLFAFIVELGVVADLADRTHTAESLLLYEDSIALGGILGNAVFCFQIMIPCAGFILPFFGVLSGIFVGCWAMALAEILNVFPIFIRRVKLVRYIKWFIIGIALGKGFGACIGFLQ
complement(199886..200551)         stage V sporulation protein AA; DWX36_RS00940                                        N/A                 gnavusMAVNQDTLYVKGDRNVEVTKREVTLGDLVSMECSNRVILPHLKTMKVLKIPENGEKRYVISILKIIACIHEKYPGLEVQNLGETDLIVTYEMQKTPSKWVHVAKTILVVLITFFGAAFSMMAFNNDVDVDKLFGYIYYWMTGKQSSGFTILEVSYSVGITIGILVFFNHFGKRRFSVDPTPMEVQMRLYENDIQTTLIEDAARKEEELDVDRANRLGAHRT
complement(200781..201275)         PHAGE_Bacill_Eldridge_NC_030920: hypothetical protein; DWX36_RS00945; phage(gi100169)     4.44e-26            gnavusIPMISGEIKRFLRDDGMIKVSRSLKELSYRIFQTREKMTDGLGREPTLEELSQEMGVEKEELVQAMEASGEVESLYRPIHQKEGSEISLLDKLEEKEHREEKILDRMLLGQLLEKLDGQERTLIYLRYFAEKTQSAVGKEMGISQVQVSRMEKKIIQNLREMTH
complement(201403..202815)         PHAGE_Entero_EFC_1_NC_025453: site-specific integrase; DWX36_RS00950; phage(gi725950572)     6.63e-84            gnavusMRNIRIGKNTSNNKKTGLYIRVSTNFQFEEGYSVGAQTEKLEKYCNYQEIDNYDLYIDGGYSGSNLNRPEMKRLIKEIQEGKVESVVVVKLDRLSRSQKDTIYLLEDVFEANDVGFISLNENFDTTTPYGKAMVGILSVFAQYERENIRERTQMGITERIKTGKWRGTKPPFGYDYNNGDDVLVPNKDAETVRKIFELYKEGYSTYALAKMFDLKGDKQVSDMLSRVTYIGKLKYNKEIVDGLHEPIVDKKLFDEVQELRKTRTRATSHKSQYLLTGLIYCGLCGAKMRYQKWSGGRVMIYCYSLDHSKPHLVKNPNCQNGKLDAAEVEDVVVSDMLKLSKEYEVIEEKSEQQNQKGFEAMNQRKSVLEGKLKSLYNLYASDTNNSVLLETIGEINKELENLNTQIEQYTLKNTRAKDMTARAKAFKSVADSWEFMSFNERQKTVREYIKKIKISNDYVEIEYNDLLTLQ
complement(202893..203072)         hypothetical protein; DWX36_RS00955                                                  N/A                 gnavusMALKIVRRYDANGNVIEDKDLERFKLDSPVVRQILYQMNKEMGAVDNIKVDAAERRNFI
complement(203209..203574)         PHAGE_Clostr_c_st_NC_007581: PemK family transcriptional regulator; DWX36_RS00960; phage(gi80159713)     5.24e-16            gnavusMTIRRGDILWADLGMFPTTSVQGGVRPVIVVSNNKANTYSSVITVVPLTSRIYKKRYLPTHVFISKYDMTGIRKGSLALAEQVMSISTKCIIEKCGRVNKWSLDRVLKAVRIQMGMNESEK
complement(203729..203912)         hypothetical protein; DWX36_RS00965                                                  N/A                 gnavusMTCVRCDTLADPEKSVTGKPMNCSLETRVFGLWSGVQHSDRLLFPSCRCRSNDSGYRGIG
complement(204153..204698)         PHAGE_Clostr_phi3626_NC_003524: putative sigma factor; DWX36_RS00970; phage(gi20065995)     7.35e-06            gnavusMILNRGPPSRFETSNKISNSGGTDMYIEHPYFYDGKYYANIDGEMIEITREVAYAMNNFYRSSKAKKVEIKNELGEVVDKMLREVPYSGQSIDGEGFMIEDFPDLNCDVEHSVLTKMEQQDIHKVIDQLNTEERMIIYGIFFENKTQTQMAEIMGISRQVLAYKLKTILNKMREMYMKKIF
complement(204953..205384)         hypothetical protein; DWX36_RS00975                                                  N/A                 gnavusMKKKIIAVITGAVILIIAAGNIYGKTESGHKRGEPDVVGTFSINRDENLTVVANRENIEDREAFARELLQMYKDDSFHSTKFSTDRGYATSLDMNIYLWKEDIEDGESVMTAEYRPVEYGKDYDVVNNPDKFQIYIDGKEVEE
complement(205392..205604)         sporulation initiation factor Spo0A; DWX36_RS00980                                   N/A                 gnavusMREKTIYEKIAEKYNTTPEEVRREMQIAIDAGFDNPDPSVQEKWKKMTLKGDRPTPEEVINYAVKQLKGN
complement(205754..206071)         PHAGE_Clostr_phiCD211_NC_029048: DNA-binding helix-turn-helix protein; DWX36_RS00985; phage(gi981220892)     1.88e-11            gnavusMDLKAVGQRIKSAREAKNLTQEELAALVNLSPTHVSVIERGLKVTKLDTFVAIANALDVSADTLLIDVVAHSVTGVTNELAEKIEKLPIKEQKKIIKVIHTLLEE
206251..206457                     hypothetical protein; DWX36_RS00990                                                  N/A                 gnavusMKSHKYWSLGALFCMLGCIYSGIRKSMTAHKYFAYSSLLCMGMSIYSGHKLVSPKKKKITESNNSENS
complement(206534..206905)         hypothetical protein; DWX36_RS00995                                                  N/A                 gnavusMRYEDSMKGVADQIIKEQQRASKIKNNPEEFHWHDEYATLNFFRFICKNIGNLGNGEIEKMVTRLKSIDQKAVENHVNGAVWEFDYDKMFCVLMENEICRKVCEKNKYNSWTKLIGQYCISMA
complement(206915..207487)         hypothetical protein; DWX36_RS01000                                                  N/A                 gnavusMTDRDYAIKSMKEITFQMASHAQDYLEVTIERHYTDIKELMTSYQKLILENQIVLEELDMECQEKINEDMAYALSYLSIYNNQLNVPKMHREMNNLMIIYGLSDMIYRGMTLVKFYAPNGVMLSEILHSCFCSHYNKTDVEVQQELGIGRTSFYKMKKQALGYLGFYFYEIVVPQAKDKRFKPSLGVEEE
complement(207738..207977)         hypothetical protein; DWX36_RS01005                                                  N/A                 gnavusMNKVYVDVVAEFRKDGQLVPIFFTWEDGRKYSIDRILKIERCASRKAGGVGMMYTCMIQGQESHLFYEVDKWFMERKTA
complement(207990..208202)         PHAGE_Bacill_GIL16c_NC_006945: putative LexA-like repressor; DWX36_RS01010; phage(gi62327525)     1.95e-08            gnavusMKKALTRKQKESYQCILDYTKEHGYPPTVREFGKLIGVKSTSSAFSRIKQLELNGYIRRIPASPRAIEIL
complement(208217..209464)         PHAGE_Bacill_SPbeta_NC_001884: IMPB/MUCB/SAMB family protein; DWX36_RS01015; phage(gi9630142)     1.26e-37            gnavusMSERVILHSDMNCFYASVEMLHHPEFAGMPLAVGGDPEARHGIVLTANYIAKQKGVKTGMALWQAKQICPKIIFVPPRMDLYLRFSKMAREIYSEYTDKIEPYGIDEAWLDVSDSRNLKGSGMTIAREISHRIKYELGVTVSIGISWNKIYAKLGSDYKKPDAITEFNRENYKDRIWQLPASDLLYVGRQTNKKLQKLGIRTIGQLAESDEKLLESHFGKIGNVLWAFANGWDEDPVCKEGYEVPVKSIGNSTTTPRDLENDLDVWIIQIALAESVAARLRKHGFKCKTVEITVRDNGLYSFSRQIHLRQPTNITNEIVTAAFQLFKDNYKWEYPIRSLGIRAADLVLDDIPVQLDLFGNQEKKEKLEKLDRTVDEIRRRFGYFSIQRAAMYQDKVLSHLDAGTHTIHPHSYFHG
215862..215875                     attR                                                                                 N/A                 GCTTTTGTCAGTTT

#### region 2 ####
complement(275421..277328)         PHAGE_Pseudo_phi3_NC_030940: protector from prophage-induced early lysis; DWX36_RS01230; phage(gi100001)     2.01e-35            gnavusMPKKSKTLCVDDLRHAEYYGMQDTFDELYQKSQNGEVFENLMDLIVSRDNILLAYRNIKANKGSYTAGTDKKNITDIGSRTPDDVVKRVRFIVTGSEHGYRPKPVRRKDIPKPNGKTRPLGIPCIWDRLIQQCIKQIMEPICEAKFSNNSYGFRPNRSVEHAINRTYTMLQMMNLHYVIEFDIKGFFDNVNHSKLIRQIWSLGIHDKTLIFIIKRILTAPIKMPDNTTVLPDKGTPQGGIISPLLANIVLNELDWWIASQWEENPIAISRGRERIIGKTKVFDKSHGYRIMKNTEMKEMHIIRYADDFRIFCRTKEDAVRTKEAVTEWIEERLKLEVSPEKTRIVNTRKRWSEFLGFKIRVRLKHHKYVVQSAICDKKVEIERAKLVEQAKNIAKPREKKSCLSEIQLYNSMVLGIQNYYQLATCISIDCREFHRRVMTVLTNRLNTETGSMLKREGGTITQAEKERFGQSKMIRYVSGIDQMIYPIAFIKNKIPMAKRSIVCSYTKEGRALIHTELNLNQYVLKGLREKISVGHSTEYHDSKISLFSAQKGKCAISGEEFADAEHVAVWLKVPGSLGGFERYKNMVLIHKKYLILLQELPQAAIKDLIKTLNITKKMLVKINSLREQANLSAII
complement(277987..278892)         type IV secretory system conjugative DNA transfer family protein; DWX36_RS01235      N/A                 gnavusMKKQNGNNLMQKWKNKAGVRLSALDKKKLVLTNLPYVLTAFYADRASCLYRSSPGEDIGNKLLYAMEHADRIFTGILLSFDLRDLLVGVTVAVILKLLVWQKQSDAKKLRKGIEYGSARWGTAEDIKPYMSDDPWMNIPLTATEALTMESRPKQPKYARNKNIVVIGGSGSGKTRFFVKPSVMQMNCSMVITDPKGTLIEECGKMLAKGSPKRDKNGNIMKDKSGKVVHEPYVIKVLNTINFSKSLHYNPFAYIRSEKDILKLVTTIIVNTKGEGEKASEDFWVSATRSQAVKSLRTVLVY
complement(278889..279380)         PcfB family protein; DWX36_RS01240                                                   N/A                 gnavusMQEEVTQKTVTFCIRATKITADLLKKVLVAYLRHQKQKSVEKKAQKNQPKQGKVTVKELAKQNAGMVNIEITDKNIKSFERYARKYGINYALKKDKSKEPPVYLVFFKGRDQDALNAAFREFSQKQIQKANKPSIHKRLAAYRAMMPKKTKDKVKNRHQEQSR
complement(279463..280257)         PHAGE_Bacill_BM5_NC_029069: hypothetical protein; DWX36_RS01245; phage(gi985757818)     3.79e-24            gnavusMANKVIADYLDEEGCLHCGICGKRKQMKVSLMGFEHVVSCLCECEVKARQELDEKMQREEAQRQLYQRKSVGLRERRFWEWKFENDNGSNQKILIARQYVENWTDMKRKNVGLLLMGPVGTGKSFFAGCIANALLEQGERVMMTNFSRILNEMTSYQADKNQIIQNLVDYPLLIIDDLGIERNSEFALEQVYNVIDSRYCKMLPLIITTNLGLNEMKSTDLDTAHQRIYSRILEMCVPIYCGGEDKRKEEGTEKLVQVQNLITG
complement(280257..281075)         PHAGE_Strept_9874_NC_031023: hypothetical protein; DWX36_RS01250; phage(gi100032)     5.58e-19            gnavusMADFEYFRAEESDQFSFFRIPKALFTEKEFASLSTDAKLLYGILLDRISLSKKNGWIDSDGYVYIIYTIAELQELLRMSHTTVTKLLYELDSVHGIGLIERYRQGNNRPSVIYVKNFVKRIRGKPVRYVASGTPETGNPDCKELEIRIARNWKSGTQKNRSPDCKNLDGSNTKINKTEKNHTDKSKGNTHALEEKFSLYGRFKNVVLSEAELRELMMLFPWDYQKRIDHLSVYMKSSGKEYQNHFATICLWAERDRTRIGMDKYEFQEGESL
complement(281085..281963)         PHAGE_Strept_9872_NC_031094: hypothetical protein; DWX36_RS01255; phage(gi100030)     5.83e-13            gnavusMSKMEYMPVDCLQVPKVLFQMEKYKNLSNTAKILYSLFLDRLKFAVQNGWVDHNGNLFVIYPKSEIKKDLNTTRYGVDQAVQELVQVGKLVRIIPNNGKANHFYINGIYENEMEEESMMTLDTIMANMPLAEREIIMDKMVKASRDIFETIADMGYIDQYETSLTAMEKRGYQDELGEMDIDQIQADGYEFGMDLAFGILEENENNPARVLDIQKYVNRQYESCSKKKFMKVLETLVHAMGNDEGFIGDMYACNKKARNYYLDEMIQSFNFVFDEMCHGTGSAANCDFDVEE
complement(281956..282348)         hypothetical protein; DWX36_RS01260                                                  N/A                 gnavusMVSVDQAYMVGHMKNADGSINNKNVVLSAACEAAELFQCMMAVNQKLEDWQRFNHTLEMHLRSVECEKIHDICQAVYGMKHPSNELEGLYLAREDEQICLLYYQVFVGMLEININSAEVLYKQKEETINE
complement(282362..282760)         PHAGE_Staphy_23MRA_NC_028775: single-stranded DNA-binding protein; DWX36_RS01265; phage(gi971742276)     1.11e-14            gnavusMNTTVISGRLVRNPGYNEVENEKGLHKIAKFVLAVRRNYSDEVSFIPVKAFAKKAEFARDYLMQGTKVMVEGEIVTGNYEDKDTGKKIYTTEVYANRIEFAGAKMVDRPPFPEDAEGFLEIPEGMEEEMPFR
complement(282774..283172)         hypothetical protein; DWX36_RS01270                                                  N/A                 gnavusMRERIESKHVTKEIKSQMPVIPVAIVKERGCTFCPYYLGNYEKQPRCMMKTCAWDDENERFHPVLRELIPFYKEKMEKAEEKFLAMKKIYTTLLGMFADEMKQEELEKDECYGCAYGKCVPCIGICYKSMKA
complement(283304..283615)         hypothetical protein; DWX36_RS01275                                                  N/A                 gnavusMTIGDVIKKSILPLAFMVFWFWMTKTIMKVSGQTDWFWWVFIAGLPFGIHKMRLILIPRGMDTTATLGMAALSVIIGALIGSIMIPVYVIRAIYVFIRYVIGK
complement(283728..284657)         PHAGE_Gordon_Nyceirae_NC_031004: late promoter transcription; DWX36_RS01280; phage(gi100046)     3.28e-07            gnavusMAVKESSASKIKFKGVDALFGLSEEQECVREIPLDELDTFKNHPFKVFRDDKMEEMIESISEYGVLVPGIARPSNSGEKDYELVVGHRRKYACRELGLKTMPVIIRDMSDDEATVVMVDSNIQRENLLYSEKAFAYRMKYEALKRQGRRTDLTLVQVEPKLKKRWAAEMVGTEVGETMSTIKRYIRLTYLSNYLLEFVDKNELPFTVAVDLSYLKSNEQSLLLAFIGTTKKMPNGSQAKKLKDLSQQKELTGEDIEKILRGEAKVNYQKISFSEKQLQKYFPPDYKKEQIEKIIFQLLDSWKAQTEQRG
complement(284638..285432)         PHAGE_Natria_PhiCh1_NC_004084: putative plasmid partitioning protein Soj; DWX36_RS01285; phage(gi22091150)     3.84e-25            gnavusMAKVIAIVNQKGGVAKSTSCVNLGIGLVKKGYKVLAIDFDPQGSLTESLGYQNPDELEITVATILHCEMNGLELPEGYGILHHEEGIDILPANIELSGVEVSLVNVMSREYVLKQFIKTISPEYDYILIDNMPSLGMLTVNALAAADSVIIPVMAHYLPVKGLEQLMQTIYKVRKQINRKLQIDGILLTMVDRRTNFSKEIIELLHDNYGEYINIFKTAIPFSIRAAETSAEGVSIYKHDPKGRVAEAYKKLVEEVIGDGSERK
complement(285435..286181)         hypothetical protein; DWX36_RS01290                                                  N/A                 gnavusMARIMTRRKAIPKAIELLQCLPQTEEVVEVIQALKKYSSTPLDRWDAASVYEALDEWTESHNGIPPRIKECDSHKELPSHMVFEKLFGKTAREFLNDYYGEMEYVRIGRHGTRCVDDQYDFLEIFKNEFERIQPATSKIYDACRNPETPSWGTIARRCKVSSWSELVTLSGVEANCIRRRYDTYNIRNKLSVSQKTNLETDLTAHEQQEEKERFEALLIKTHDLTLQAENQKKAEKAVSKHTLRIGRK
complement(286388..286618)         PHAGE_Bacill_Moonbeam_NC_027374: hypothetical protein; DWX36_RS01295; phage(gi100165)     6.55e-27            gnavusMDHTIALIEKSHNGDKEAREQLVEENIGLIWCVVKRFYGRGIEAEDLFQIGSIGLIKAIDKFDLSYDVKFSTYAVPI
