gi|00000000|ref|NZ_RXNN01000016.1|  Salmonella enterica subsp. enterica serovar Typhimurium strain 41502, gc%: 49.04%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

#### region 1 ####
18375..18386                       attL                                                                                 N/A                 CAACCGGAGCCA
complement(21013..22176)           PHAGE_Salmon_SE1_NC_011802: Int; EKL41_RS26980; phage(gi219681195)                   0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMSLFRRGETWYASFTLPNGKRFKQSLGTKDKRQATELHDKLKAEAWRVNKLGETPDMTFEEACVRWLEEKAHKKSLDDDKSRIGFWLQHFAGMQLKDITETKIYSAIQKMTNRRHEENWKLMDEACRKNGKQPPVFKPKPAAVATKATHLSFIKALLRAAEREWKMLDKAPIIKVPQPKNKRIRWLEPHEAKRLIDECPEPLKSVVEFALSTGLRRSNIINMEWQQIDMQRKVAWIHPEQSKSNQAIGVALNDTACRVLKKQIGNHHKWVFVYKESSTKPDGTKSPVVRKMRYDANTAWRSALKRAGIEDFRFHDLRHTWASWLVQAGVPISVLQEMGGWESIEMVRRYAHLAPNHLTEHARQIDSIFGTSVPNMSHSKNKEGTNNT
complement(22089..22403)           PHAGE_Salmon_SE1_NC_011802: Xis; EKL41_RS04640; phage(gi219681196)                   2.63e-72            SalmonellaentericasubspentericaserovarTyphimuriumMESHSLTLDEACAFLKISRPTATNWIRTGRLQATRKDPSKPKSPYLTTRQACVAALQSPLHTVQVSAGDDITEELKCHYSAEVKPGTPVSHCRTAKDLSSLLGQR
complement(22406..23035)           PHAGE_Entero_UAB_Phi20_NC_031019: tail assembly protein; EKL41_RS04645; phage(gi100053)     2.72e-142           SalmonellaentericasubspentericaserovarTyphimuriumMSDQSKYYDYYMVEGEDVKELIQSYDTINDQRNSILTTAAEKVGAIAWTTTSSWGGEGGLLQSFVWEKGYEFPCQITIKREDFWDGKRVVIARGKGNTKEGRAYNKELDAIMHNANAKLKSLPEWNYYITNHYGIMRTGIGGQSGRGLGFVMLSTYGGKHPKRNDCLIFAIPNNKEERHGEVVIPDSFKKITYGKFYDIANEVEEEAVE
complement(23136..23315)           PHAGE_Entero_UAB_Phi20_NC_031019: tail tip protein; EKL41_RS04650; phage(gi100054)     1.48e-36            SalmonellaentericasubspentericaserovarTyphimuriumMSCPKCGSGNIAKEKTMRGWSDDYVCCDCGYNDSKDAFGERGKNEFVRINKERKGNEKS
complement(23412..23816)           PHAGE_Salmon_SE1_NC_011802: hypothetical protein; EKL41_RS04655; phage(gi219681197)     6.99e-87            SalmonellaentericasubspentericaserovarTyphimuriumPVSQAYELPEIIEGMEVSVDVSTCDFDAGHRYFGTVTEVSELGTAKNGYILLVQDAKPNFDVNGNSPVIPGGWISCSERMPDNDESKPIAIFTGKCLGQGMFVATYDDDGFFDYWEGMEIIGVSHWMQLPDPPL
complement(24099..24353)           PHAGE_Salmon_ST64T_NC_004348: hypothetical protein; EKL41_RS26985; phage(gi24371543)     1.20e-51            SalmonellaentericasubspentericaserovarTyphimuriumMTTITKEWLQQTIAEFENTRDDIPFGLDDDDAKILIVLKRALASLTAEPVRYLNKFSGTCVTLEQQPNAADDVAVYMPLYTAPPV
complement(24357..24575)           PHAGE_Salmon_g341c_NC_013059: O-Polysaccharide acetyltransferase inhibitor; EKL41_RS04665; phage(gi255252705)     7.99e-45            SalmonellaentericasubspentericaserovarTyphimuriumMTKIFRKSYPRQSRFKEALFFLLFLILMVPISPIFFIWLAGVQAEKIAEWYSSIVWGPFNKLHNKLNPYREG
complement(24577..25104)           PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; EKL41_RS04670; phage(gi23505476)     5.92e-59            SalmonellaentericasubspentericaserovarTyphimuriumMSNIDKQALRERYSPKPVPECHICGKEMTIQRMSASRITYGCTGATYDDKGCHYAEGRSIADDHYEQSRVTVVDVSDPDVLALLDENIQLQREKDATEAVALALRDDMRDAREKLEAAERRIAELEARKVNLSKLSVGEVMYVSGFSRDYAEGWCAGNDNAIHEIRTAGIKVKGE
complement(25101..25616)           PHAGE_Erwini_Hena1_NC_048828: holin; EKL41_RS04675; phage(gi100034)                  2.74e-58            SalmonellaentericasubspentericaserovarTyphimuriumMSNRIRNAQVFDARTGEYPVYMYIHWIIGGELDFDANYQRGYVWGHEEQQAFLNAVISGFPIGSVALAKAPDWCSRELPYIEVVDGKQRLTTLKKFITNEIPIILADGPLYWRDMTRAEQLAFGRRPLPAVVLDEVTYKDRLAYFMVVNFTGVPQSEEHKRHVMQLMEAAQ
complement(25726..26343)           PHAGE_Salmon_SE1_NC_011802: hypothetical protein; EKL41_RS04680; phage(gi219681202)     1.56e-67            SalmonellaentericasubspentericaserovarTyphimuriumMKEVKIYTIVSDQLSPPITGESFCTDMVRHSDYAELEAKYAVLTVDNDKAMESLKQADAVVKLAHEKFSALAAENETLKYQEPKLAAMMSCLDAFYADEGVPERAMMAAYNILRKSVGTPATDAFLAEVRAKAHKEGAYFVANRMLAAWDAGFIDDTAKNAADIARMILTSTEFMADAPEGDFDRSFADGVLEGIAAQLRKGVQS
complement(26340..26510)           PHAGE_Salmon_SEN22_NC_028696: hypothetical protein; EKL41_RS04685; phage(gi966201342)     1.35e-33            SalmonellaentericasubspentericaserovarTyphimuriumMRGLSYDPGILPSEMIIRHRFKPINDIPREEMLARKSFPSVNENKYLNAMFRSGKK
complement(26521..26814)           PHAGE_Salmon_UPF_BP1_NC_047875: capsid decoration protein; EKL41_RS04690; phage(gi100066)     3.07e-64            SalmonellaentericasubspentericaserovarTyphimuriumMPAPLYGADDPRRCSGNSVSEVLEKFRKNYDLIMSLPQETKEEKEFRHCMWLAEKEERERIYQTSIRPFRKATYTQFIEIDQRLKNYRSRYGAISNN
complement(26861..27145)           PHAGE_Salmon_UPF_BP1_NC_047875: capsid maturation protease; EKL41_RS04695; phage(gi100067)     9.01e-64            SalmonellaentericasubspentericaserovarTyphimuriumMRRLNITPAEMESVCGSMVACRAAEHLGLNINQFYYIAKKLSLKTAFVKPRWSDDEDKRMQTLISSGYTQRNVAKILGRSEESVKSRLSRLRKK
complement(27145..27852)           PHAGE_Salmon_SE1_NC_011802: Erf; EKL41_RS04700; phage(gi219681206)                   2.96e-170           SalmonellaentericasubspentericaserovarTyphimuriumMNLDQLDEPFAAEDIEWRIQQSGKTGSGKVWAIVLAYVTNRAIMKRLDDVCGKAGWRNEYRDIPNNGGVECGISIKIGSEWVTKWDAAENTQVEAVKGGRSGAMKRAAVQWGIGRYLYNLEEGFAQISSDKKQGWHRAKLKDGTGFYWLPPSLPDWAMPASCNQPSPENTNQKSPSVDCEQILKDFSDYAATETDKKKLIERYQHDWQLLDGHDDAQTKCVQVMNIRINELKQVA
complement(27849..27992)           PHAGE_Salmon_SE1_NC_011802: Arf; EKL41_RS26990; phage(gi219681207)                   1.45e-18            SalmonellaentericasubspentericaserovarTyphimuriumMLHDFDDDEFIALISPEIEEEVEQQINLAAERQNPVISWDEFAGYYS
complement(27982..28170)           PHAGE_Salmon_SE1_NC_011802: Kil; EKL41_RS04705; phage(gi219681208)                   2.17e-40            SalmonellaentericasubspentericaserovarTyphimuriumMTITPVNGTILVQQGNREFNKLYEKVFPDTKQGISDAYTWAAGIALGWDKWQDEDWERRHVA
complement(28151..28303)           PHAGE_Salmon_SE1_NC_011802: C3; EKL41_RS04710; phage(gi219681209)                    1.11e-31            SalmonellaentericasubspentericaserovarTyphimuriumMQYSFAGWPIAGCPSESLLDRITRKLRAGWKRLGEILNQPGVPRHDHYAC
complement(28627..28911)           PHAGE_Salmon_SE1_NC_011802: hypothetical protein; EKL41_RS04715; phage(gi219681210)     5.55e-62            SalmonellaentericasubspentericaserovarTyphimuriumMGYTPGPWKWWTSNSFLRLSSQATGKDGGVIDFYVMKDGHSSLIVSKEDMNLIAAVPELLEALLNIVDMEYDVSEWDAVYAKARAAISKALGEE
complement(28948..29142)           PHAGE_Salmon_SE1_NC_011802: Ral; EKL41_RS04720; phage(gi219681211)                   7.93e-40            SalmonellaentericasubspentericaserovarTyphimuriumMTTTIDTNQWCSRFVKCKGCKLDAECMVKPEEMALVREDGKIVDKWAIRTTEMIARELEKLKAI
29356..29943                       PHAGE_Salmon_SE1_NC_011802: SieB; EKL41_RS04725; phage(gi219681212)                  8.08e-143           SalmonellaentericasubspentericaserovarTyphimuriumMNNSWWQELMHFFLQGMTLKQLIHMLIILILLIVVMPVSVKEWGNLHNPEILPHYWMYYILLFCVSYVLNGVFNSVYHAVTERIEALTAQRRKAREEKVVRDLFDSLTPGERAYLAFAVAANNQLKTEKGSPESISLLEKGLITRLPSVIGYPDIDRFVIPEKYFNECYMRFAGKSDILMNELIAQDEQLKKITT
complement(29956..30258)           PHAGE_Salmon_SE1_NC_011802: Gp24; EKL41_RS04730; phage(gi219681213)                  6.23e-66            SalmonellaentericasubspentericaserovarTyphimuriumMTVIIYGKSTFAGNAKTRRHERRRKLAMERDTICNIIDSIFGCDAPDASHEVKAKRIDRVTKAISLSGTRQKEVEGGSVLLPDVALYAAGHRKSKQITAR
complement(30613..31275)           PHAGE_Salmon_ST64T_NC_004348: repressor protein; EKL41_RS04735; phage(gi24371557)     1.39e-162           SalmonellaentericasubspentericaserovarTyphimuriumMKTPWNELAKARMKQIGLTQDKLAEALGKTQGAIGHWLNGRREPSIEDIAAIMKQLGLKELVLSSDGMVDYPDSSLSNVSSPRPHTEIRRFPLISWVSAGNWCEAVEPYQLREIEVWPETTAHASERSFWLTVRGDSMTSPTGLSIPEGMQILVDPAIEPTNGRLVVAKLESENEATFKKYIVDAGQKYLKPLNPSYHMIPINGNCRIIGVVIEAKWQGL
31394..31609                       PHAGE_Salmon_SEN22_NC_028696: putative repressor protein; EKL41_RS04740; phage(gi966201352)     1.60e-47            SalmonellaentericasubspentericaserovarTyphimuriumMSNLRKIRETMKVSQAVLAEKVGCTQGAIGHYESGRRHPDLRMCRQLVEALNSFGANVQLDDVFPPELNAA
31720..32001                       PHAGE_Salmon_BTP1_NC_042346: DNA adenine methyltransferase; EKL41_RS04745; phage(gi100041)     2.00e-62            SalmonellaentericasubspentericaserovarTyphimuriumMNVVATKSKKAARIESTLLNKLAMMGQKTFAKAMGVPEYQVSRWKNGFFSQVSMMLAVLEYGIEDEEMAELTRRLATYLTKEKAPKNGEFFEA
32036..32182                       PHAGE_Salmon_UPF_BP1_NC_047875: hypothetical protein; EKL41_RS04750; phage(gi100009)     3.47e-27            SalmonellaentericasubspentericaserovarTyphimuriumMPKQLSPDQDKLHKNILRDRFLSSFKQPGRFRAELEKVKLILKRKGHE
32175..33074                       PHAGE_Salmon_SE1_NC_011802: Gp18; EKL41_RS04755; phage(gi219681220)                  0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMSNISNLAEAREARRLQKPRTNGGKGFALIHRQFMDSKLYKDSQAVHLFLHLILKANHSPAVVNTDIGEMLVERGQLITGRPKLVSETFIPDNKVKSLLRSFEGNGMIRIESKGRKFSLITVLKYDDFQAPNCPTDVQRLSNANTSNDAAYSECCPTGVQRLSINNNINNISNTNVLESTAADENPDKKKSALSCQDVVDAYHELLPEASRVRALNDKRKNQIRTFWRKAGVITRQLDGHGFTMQDWRNYLSYVGENCRWMFEERQNHQRGTVWHKKGFDFLLNDNTYLKVREGEHDDR
33064..34500                       PHAGE_Salmon_ST160_NC_014900: Gp12; EKL41_RS04760; phage(gi318065930)                0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMTDNFYAPPHSIEAEQAVIGGLLLDDDSSERVQKVLAMLKPDSFYSRPHKILFEEITRMHREQKPVDGLTLFDELERKSLAVSVGGFAYIAEIAKNTPSAANIVAYAMQVRETAMERYAINRMTEATELLYSRNGMTATQKYEAIQAIFTQLTDHAKTGSRRGLRSFGEVMEDWVSDLEKRFDPSGEQRGMSTGIPSLDRMLSPKGLVKGSLFVIGARPKMGKTTLYSQMAINCAVHEKKPALMFSLEMPGDQILEKLVGQKSGVNPNIFYLPATNDADDGYQGDYDGDFNRAIETANRLSEIDLLYIDDTPGLSLAQIISESRRIKREKGCVGMILVDYLTLMTAEKADRNDLAYGMITKGLKNLSKELDCVVVLLTQLNRALESRTNKRPLPSDSRDTGQIEQDCDYWVGIHREGAFDDSVPPGETELILRLNRHGNTGTVYCIQANGAIYDTDQQSAEMRRREREEPHSKKKGGF
34577..34771                       hypothetical protein; EKL41_RS04765                                                  N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMRKKQAEKLFCDAMDALAKVGESPLNYCLSYARGFMAAENKKEYLHEWEDGTMRLKVSDGEQVH
34771..35061                       PHAGE_Salmon_SE1_NC_011802: hypothetical protein; EKL41_RS04770; phage(gi219681223)     8.28e-66            SalmonellaentericasubspentericaserovarTyphimuriumMERNMDESRKAFEQWALEVMQFTSDDLRWDERRNCYRDYVLHIAWKGWQAGRKTIEIEIPAACADDEYFIDGVFQPMRYERDVERAIIAAGIKVKE
35064..35360                       PHAGE_Salmon_SE1_NC_011802: hypothetical protein; EKL41_RS04775; phage(gi219681224)     4.58e-64            SalmonellaentericasubspentericaserovarTyphimuriumMSKVSRGMKISLIFILNPHRIFLASAVWLSDFVYWLADKLDDFARWLENFANARFESWPLIGERMSDELKRYYADKRKEKSRRASEAIIPASQRSNQK
35317..35763                       PHAGE_Salmon_vB_SemP_Emek_NC_018275: NinB; EKL41_RS04780; phage(gi399498846)         2.81e-105           SalmonellaentericasubspentericaserovarTyphimuriumMKQLFLLRNEAIRNNAIDAILSLPIDDKSPHEVHVKEPKRTKAQNDRMWPMLQDVSRQVLWHGQRLSPEDWKDIFTALWLKTKKLEQRSVPGIDGGVVLLGVRTSKMRKASMTELIEIMFWFGSERNVRWSDDSRREYEWSQRTGRVA
35760..35933                       PHAGE_Entero_UAB_Phi20_NC_031019: hypothetical protein; EKL41_RS04785; phage(gi100006)     2.99e-37            SalmonellaentericasubspentericaserovarTyphimuriumMKHCYRCGESKDDYRFRPNQPYWHQWCIRCERSPVGNFPLPETKEDVWHDSDEVSPT
35900..36076                       PHAGE_Salmon_BTP1_NC_042346: putative single-stranded DNA binding protein; EKL41_RS04790; phage(gi100050)     2.32e-36            SalmonellaentericasubspentericaserovarTyphimuriumMARQRRSITDIICENCKYLPTKRSRNKPKPIPKESDVKTFNYTAHLWDIRWLRERARK
36079..36420                       PHAGE_Salmon_SE1_NC_011802: hypothetical protein; EKL41_RS04795; phage(gi219681228)     1.21e-81            SalmonellaentericasubspentericaserovarTyphimuriumMDYSQLSDFEINRMVGDIIFKGLWACKPETSGNNTNKWYYGNADTTFEPLNHLPDYCNDPSASWPIIEKHRISILDQLTEWCVDAKGVSPIFDTRPLRAAMIVFLMMQDANNA
36413..36589                       PHAGE_Salmon_SE1_NC_011802: NinF; EKL41_RS04800; phage(gi219681229)                  2.11e-36            SalmonellaentericasubspentericaserovarTyphimuriumMLSPSQSIQYQKESVDRALTCANCGQKLHVLEVHVCEACCAELMSDPNSSMYEEKDDG
36582..37187                       PHAGE_Salmon_SE1_NC_011802: NinG; EKL41_RS04805; phage(gi219681230)                  1.66e-146           SalmonellaentericasubspentericaserovarTyphimuriumMAKPARRKCKICKEWFHPAFSNQWWCCPEHGTQLALERRIKEREKAEKAAEKKRRREEQKQKDKLKIRKLALKPRSYWIKQAQQAVNAFIRERDRDLPCVSCGTLTSAQWDAGHYRTTAAAPQLRFDERNIHKQCVVCNQHKSGNLVPYRVELINRIGQEAVDEIESNHNRHRWTIEECKAIKAEYQQKLKDLRDSRREAA
37184..37408                       PHAGE_Salmon_SE1_NC_011802: NinY; EKL41_RS04810; phage(gi219681231)                  1.13e-50            SalmonellaentericasubspentericaserovarTyphimuriumMSKIQYPMTTAAIFDDVVYPLHFDNAGKVRQEMEGAVNWFCRWRNEEKAVVKARLLVSCWGQYLSHEQVIREAA
37405..37608                       PHAGE_Salmon_SE1_NC_011802: NinH; EKL41_RS04815; phage(gi219681232)                  1.10e-43            SalmonellaentericasubspentericaserovarTyphimuriumMTHTIKTIPDMLIETYGNQTEVARRLSCHRNTVRRYLYDKEARYHAIVNGVLMIHQGGRGIYDRNQH
37589..37768                       PHAGE_Salmon_SE1_NC_011802: NinZ; EKL41_RS04820; phage(gi219681233)                  8.96e-37            SalmonellaentericasubspentericaserovarTyphimuriumMTVTSINQAKQQCERDEAELRSVREMTEQHQKAMDYLHERERELVNRLGLNKTSGGDAA
37765..38538                       PHAGE_Salmon_SE1_NC_011802: Gp23; EKL41_RS04825; phage(gi219681234)                  0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMNLENTVKFHSPKSPQLSDSPRATASDSLTNTDVMAAFGMAQSRAPLGFSAFSGKMNLSDNDKRKAIQLLVQHGMKHCDKVAALRKLDTNVKGKVVQTLATFAYQDYCRSAASNVMCSCCKGRGVLRNKKRIVKHPGCGEKTPAKTAVEVTESLCTKCNGAGVVSTSCVKCRGRGVALDRKKSELQGAPVYSSCKQCSGRGYERIPAASCFRAICQFTAAISPGVWDKAIKPFYESLISKVEMEESAANVVLSKVTS
38969..39172                       PHAGE_Salmon_SEN22_NC_028696: class II holin; EKL41_RS04835; phage(gi966201365)      9.81e-43            SalmonellaentericasubspentericaserovarTyphimuriumMYRMDKIREWFSYSFGGLTAMGGILSLNDWAVIIGILCTVGTFGINWYYKRKEREDRLNGNVTGTTK
39150..39647                       PHAGE_Salmon_SE1_NC_011802: Gp19; EKL41_RS04840; phage(gi219681236)                  2.54e-119           SalmonellaentericasubspentericaserovarTyphimuriumMSPALRNSVMAAISGGAIAIASVLITGPGGNDGLEGVRYKPYKDVVGVLTVCYGHTGKDIMPGKTYTEAECKALLNKDLITVARQINPYIKVDIPETTRGALYSFVYNVGAGNFRTSTLLRKINQGDIKGACDQLRRWTYAGGKQWKGLMTRREVERDVCLWGKQ
39644..40111                       PHAGE_Salmon_SE1_NC_011802: Gp15; EKL41_RS04845; phage(gi219681237)                  1.39e-109           SalmonellaentericasubspentericaserovarTyphimuriumMSRLTSIISALVICIIVCLSWAVNHYRDNAITYKVQRDTVTQKLALANATITDMQTRQRDVAELDARYTKELADAKAENDALRRKLDNGGRVLVKGKCPVSSSAETSSASGMGNDATVELSPVAGRNVLGIRDGIISDQAALRTLQEYIRTQCLK
40324..40854                       PHAGE_Salmon_SE1_NC_011802: hypothetical protein; EKL41_RS04855; phage(gi219681238)     9.55e-129           SalmonellaentericasubspentericaserovarTyphimuriumMKYPTVMVNGVSVRVDEDGRYNLNDLHAAAVANGEATEQQRPSQFLCSAQIKRFIKALEAKVQKSTLKQIQPLKIIKGGTEPGVWGVELLAIRYAAWIKPEFEIEVYEVFKTIVRLGVGAMSRLNKIDHIISTETKAISQCASQMAKWGVGGRTRLLHVARERAANEVQMYLPGMV
41060..41071                       attR                                                                                 N/A                 CAACCGGAGCCA
41077..41319                       PHAGE_Salmon_SE1_NC_011802: hypothetical protein; EKL41_RS04860; phage(gi219681239)     5.56e-48            SalmonellaentericasubspentericaserovarTyphimuriumMAEITALTELQQMNLDILRLVQSDTAAAEKAIAFVAGSKLNFELFKDQLVLAQGEGTALARAEKAIREAKEALDLFTAGA
41323..41502                       PHAGE_Entero_UAB_Phi20_NC_031019: hypothetical protein; EKL41_RS04865; phage(gi100024)     1.84e-39            SalmonellaentericasubspentericaserovarTyphimuriumMAKTKWPKLPRFFVPLFHSANVYLCRSKEEWDQACIHLGVGSGGNEMLAGATQSYCNTET
