Submission Results

Sequence Name: Not Available

GenBank Accession Number: STBD00000000.1

GenInfo (GI) Number: 0000000000

Download Results: STBD00000000.1.PHASTER.zip

gi|00000000|ref|STBD00000000.1| Klebsiella pneumoniae strain SIKP053, whole genome shotgun 5510890, gc%: 57.25%

Download summary as .txt file: summary.txt file_download

Total: 10 prophage regions have been identified, of which 4 regions are intact, 6 regions are incomplete, and 0 regions are questionable.

RegionRegion LengthCompletenessScore# Total ProteinsRegion PositionMost Common PhageGC %Details
17.1Kbincomplete3010890874-898070 info_outlinePHAGE_Mycoba_RhynO_NC_023609(1)55.52%Show info_outline
238.3Kbintact150423410906-3449227 info_outlinePHAGE_Salmon_SEN4_NC_029015(21)50.05%Show info_outline
343.7Kbintact150613558020-3601755 info_outlinePHAGE_Entero_mEp390_NC_019721(12)50.52%Show info_outline
448.6Kbintact130644321083-4369758 info_outlinePHAGE_Entero_mEp237_NC_019704(13)52.88%Show info_outline
512Kbincomplete40124508392-4520404 info_outlinePHAGE_Entero_P4_NC_001609(2)49.86%Show info_outline
648.1Kbintact150675220094-5268263 info_outlinePHAGE_Salmon_SEN34_NC_028699(22)52.77%Show info_outline
725.6Kbincomplete20135355825-5381493 info_outlinePHAGE_Salmon_SJ46_NC_031129(3)56.64%Show info_outline
816.6Kbincomplete60265421927-5438551 info_outlinePHAGE_Entero_P1_NC_005856(5)50.11%Show info_outline
914.2Kbincomplete30215449641-5463843 info_outlinePHAGE_Salmon_SE1_NC_011802(2)49.78%Show info_outline
1026.9Kbincomplete60245483778-5510689 info_outlinePHAGE_Salmon_SPN3UB_NC_019545(4)53.07%Show info_outline
Intact (score > 90)
Questionable (score 70-90)
Incomplete (score < 70)
Region: The number assigned to the region.
Region Length: The length of the sequence of that region (in bp).
Completeness: A prediction of whether the region contains a intact or incomplete prophage based on the above criteria.
Score: The score of the region based on the above criteria.
# Total Proteins: The number of ORFs present in the region.
Region Position: The start and end positions of the region on the bacterial chromosome.
Most Common Phage: The phage(s) with the highest number of proteins most similar to those in the region.
GC %: The percentage of GC nucleotides of the region.

Criteria for scoring prophage regions (as intact, questionable, or incomplete):
Method 1:

  1. If the number of certain phage organism in this table is more than or equal to 100% of the total number of CDS of the region, the region is marked with total score 150. If less than 100%, method 2 and 3 will be used.
Method 2:
  1. If the number of certain phage organism in this table is more than 50% of the total number of CDS of the region, that phage organism is considered as the major potential phage for that region; the percentage of the total number of that phage organism in this table in the total number of proteins of the region is calculated and then multipled by 100; the percentage of the length of that phage organism in this table in the length of the region is calculated and then multipled by 50 (phage head's encapsulation capability is considered).
Method 3:
  1. If any of the specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin') are present, the score will be increased by 10 for each keyword found.
  2. If the size of the region is greater than 30 Kb, the score will be increased by 10.
  3. If there are at least 40 proteins in the region, the score will be increased by 10.
  4. If all of the phage-related proteins and hypothetical proteins constitute more than 70% of the total number of proteins in the region, the score will be increased by 10.
Compared the total score of method 2 with the total score of method 3, the bigger one is chosen as the total score of the region.
If the region's total score is less than 70, it is marked as incomplete; if between 70 to 90, it is marked as questionable; if greater than 90, it is marked as intact.

gi|00000000|ref|STBD00000000.1| Klebsiella pneumoniae strain SIKP053, whole genome shotgun 5510890, gc%: 57.25%

Download details as .txt file: detail.txt file_download

Hits against Virus and Prophage Database
Hits against Bacterial Database or GenBank File

Region 1, total 10 CDS

#CDS PositionBLAST HitE-ValueSequence
1complement(890874..891743)PHAGE_Strept_phiARI0923_NC_030946: hypothetical protein; FAQ89_04450; phage(gi100029)1.67e-08Showinfo_outline
2complement(891740..891991)hypothetical protein; FAQ89_044550.0Showinfo_outline
3complement(892126..892245)PHAGE_Erwini_ENT90_NC_019932: phage virion morphogenesis protein; FAQ89_04460; phage(gi431810964)2.17e-10Showinfo_outline
4complement(892257..892640)PROPHAGE_Escher_CFT073: putative transposase; FAQ89_04465; phage(gi26246170)7.58e-82Showinfo_outline
5892725..893072hypothetical protein; FAQ89_044700.0Showinfo_outline
6893142..894245phosphotransferase; FAQ89_044750.0Showinfo_outline
7complement(894242..895213)PHAGE_Bacill_SP_15_NC_031245: hypothetical protein; FAQ89_04480; phage(gi100150)8.65e-15Showinfo_outline
8complement(895420..896256)PHAGE_Mycoba_RhynO_NC_023609: hydrolase; FAQ89_04485; phage(gi589893746)6.38e-16Showinfo_outline
9complement(896449..897024)hypothetical protein; FAQ89_044900.0Showinfo_outline
10897156..898070PHAGE_Burkho_phi1026b_NC_005284: gp58; FAQ89_04495; phage(gi38707948)9.18e-21Showinfo_outline

Region 2, total 44 CDS

#CDS PositionBLAST HitE-ValueSequence
1complement(3410906..3411919)PHAGE_Bacill_G_NC_023719: gp350; FAQ89_16740; phage(gi593777806)5.15e-18Showinfo_outline
23412051..3412068attL0.0Showinfo_outline
3complement(3412184..3413167)PHAGE_Salmon_SEN4_NC_029015: integrase; FAQ89_16745; phage(gi971765859)2.93e-118Showinfo_outline
4complement(3413283..3413582)PHAGE_Entero_P2_NC_001895: gpC; FAQ89_16750; phage(gi9630358)2.41e-38Showinfo_outline
53413703..3413981PHAGE_Salmon_SEN4_NC_029015: regulatory protein Cox; FAQ89_16755; phage(gi971765864)2.58e-25Showinfo_outline
63414002..3414220PHAGE_Salmon_SEN4_NC_029015: hypothetical protein; FAQ89_16760; phage(gi971765866)7.18e-10Showinfo_outline
73414236..3414613hypothetical protein; FAQ89_167650.0Showinfo_outline
83414629..3414901hypothetical protein; FAQ89_167700.0Showinfo_outline
93414970..3415194hypothetical protein; FAQ89_167750.0Showinfo_outline
103415191..3415757PHAGE_Yersin_PY54_NC_005069: exonuclease; FAQ89_16780; phage(gi33770559)1.24e-20Showinfo_outline
113415766..3415993hypothetical protein; FAQ89_167850.0Showinfo_outline
123415990..3416946PHAGE_Salmon_SEN4_NC_029015: methyl-directed repair DNA adenine methylase; FAQ89_16790; phage(gi971765820)4.29e-104Showinfo_outline
133416964..3419545PHAGE_Salmon_SEN4_NC_029015: replication protein; FAQ89_16795; phage(gi971765822)0.0Showinfo_outline
14complement(3419836..3422106)DNA helicase UvrD; FAQ89_168000.0Showinfo_outline
15complement(3422106..3422897)hypothetical protein; FAQ89_168050.0Showinfo_outline
16complement(3423742..3424803)PHAGE_Salmon_SEN4_NC_029015: portal vertex protein; FAQ89_16810; phage(gi971765828)1.90e-129Showinfo_outline
17complement(3424797..3426524)PHAGE_Salmon_SEN4_NC_029015: terminase ATPase subunit; FAQ89_16815; phage(gi971765829)0.0Showinfo_outline
183426681..3427520PHAGE_Salmon_SEN4_NC_029015: capsid scaffolding protein; FAQ89_16820; phage(gi971765830)5.10e-63Showinfo_outline
193427530..3428564PHAGE_Salmon_SEN4_NC_029015: major capsid protein; FAQ89_16825; phage(gi971765831)4.46e-125Showinfo_outline
203428614..3429471PHAGE_Salmon_SEN4_NC_029015: terminase endonuclease subunit; FAQ89_16830; phage(gi971765832)2.44e-66Showinfo_outline
213429584..3430099PHAGE_Salmon_SEN4_NC_029015: head completion-stabilization protein; FAQ89_16835; phage(gi971765833)3.14e-46Showinfo_outline
223430099..3430299PHAGE_Salmon_SEN4_NC_029015: tail component protein; FAQ89_16840; phage(gi971765834)1.39e-20Showinfo_outline
233430290..3430574phage tail protein; FAQ89_168450.0Showinfo_outline
243430571..3431116PHAGE_Mannhe_vB_MhS_535AP2_NC_028853: endolysin; FAQ89_16850; phage(gi971749661)1.53e-42Showinfo_outline
253431128..3431457DUF2570 domain-containing protein; FAQ89_168550.0Showinfo_outline
263431639..3432106PHAGE_Salmon_SEN4_NC_029015: tail protein; FAQ89_16860; phage(gi971765838)4.06e-24Showinfo_outline
273432103..3432738PHAGE_Salmon_SEN4_NC_029015: tail completion protein; FAQ89_16865; phage(gi971765839)1.96e-62Showinfo_outline
283432735..3433322PHAGE_Salmon_SEN4_NC_029015: baseplate assembly protein V; FAQ89_16870; phage(gi971765841)2.67e-59Showinfo_outline
293433319..3433669PHAGE_Entero_P88_NC_026014: lysozyme family baseplate assembly protein; FAQ89_16875; phage(gi744692736)2.18e-37Showinfo_outline
303433671..3434594PHAGE_Entero_P88_NC_026014: baseplate assembly protein J; FAQ89_16880; phage(gi744692737)1.25e-70Showinfo_outline
313434584..3437610PHAGE_Escher_vB_EcoM_ep3_NC_025430: tail protein; FAQ89_16885; phage(gi712913209)6.45e-31Showinfo_outline
323437607..3437819hypothetical protein; FAQ89_168900.0Showinfo_outline
333437819..3438916PHAGE_Salmon_SEN4_NC_029015: tail fiber protein; FAQ89_16895; phage(gi971765845)1.80e-11Showinfo_outline
343439516..3440739PHAGE_Entero_RB49_NC_005066: hypothetical protein; FAQ89_16900; phage(gi33620548)1.13e-09Showinfo_outline
353440757..3441419hypothetical protein; FAQ89_169050.0Showinfo_outline
36complement(3441883..3442356)PHAGE_Entero_P88_NC_026014: tail protein; FAQ89_16910; phage(gi744692744)6.19e-72Showinfo_outline
37complement(3442372..3445347)PHAGE_Salmon_SEN4_NC_029015: tail length tape-measure protein; FAQ89_16915; phage(gi971765850)5.13e-74Showinfo_outline
38complement(3445334..3445492)PHAGE_Entero_P88_NC_026014: tail fiber protein; FAQ89_16920; phage(gi744692746)5.77e-17Showinfo_outline
39complement(3445492..3445809)PHAGE_Salmon_SEN4_NC_029015: tail protein; FAQ89_16925; phage(gi971765852)8.38e-19Showinfo_outline
40complement(3445855..3446370)PHAGE_Salmon_SEN4_NC_029015: major tail tube protein; FAQ89_16930; phage(gi971765853)3.87e-48Showinfo_outline
41complement(3446370..3447542)PHAGE_Salmon_SEN4_NC_029015: tail sheath monomer; FAQ89_16935; phage(gi971765854)7.82e-157Showinfo_outline
423447697..3448836PHAGE_Salmon_SEN4_NC_029015: late control D protein; FAQ89_16940; phage(gi971765856)2.24e-154Showinfo_outline
433448880..3449131PHAGE_Entero_186_NC_001317: B protein; FAQ89_16945; phage(gi9634083)1.06e-12Showinfo_outline
443449227..3449244attR0.0Showinfo_outline

Region 3, total 64 CDS

#CDS PositionBLAST HitE-ValueSequence
13558020..3558949PHAGE_Entero_VT2phi_272_NC_028656: hypothetical protein; FAQ89_17500; phage(gi966197797)0.0Showinfo_outline
23559038..3559061attL0.0Showinfo_outline
3complement(3559156..3559527)PHAGE_Entero_mEp390_NC_019721: hypothetical protein; FAQ89_17505; phage(gi428782690)2.44e-34Showinfo_outline
4complement(3559484..3559723)PHAGE_Cronob_phiES15_NC_018454: hypothetical protein; FAQ89_17510; phage(gi401817614)7.31e-30Showinfo_outline
5complement(3560274..3560726)ImmA/IrrE family metallo-endopeptidase; FAQ89_175150.0Showinfo_outline
6complement(3560816..3561175)PHAGE_Burkho_Bcep22_NC_005262: hypothetical protein; FAQ89_17520; phage(gi38640310)5.27e-07Showinfo_outline
7complement(3561728..3561811)DNA-invertase; FAQ89_175250.0Showinfo_outline
8complement(3561827..3562249)PHAGE_Entero_HK544_NC_019767: hypothetical protein; FAQ89_17530; phage(gi428783240)1.28e-35Showinfo_outline
9complement(3562327..3562509)PHAGE_Erwini_ENT90_NC_019932: DNA invertase-like protein; FAQ89_17535; phage(gi431810970)7.29e-16Showinfo_outline
10complement(3562521..3563321)hypothetical protein; FAQ89_175400.0Showinfo_outline
11complement(3563331..3565136)PHAGE_Vibrio_VvAW1_NC_020488: hypothetical protein; FAQ89_17545; phage(gi460042928)3.84e-10Showinfo_outline
12complement(3565367..3568444)PHAGE_Pseudo_PS_1_NC_029066: tail protein; FAQ89_17550; phage(gi985757719)2.03e-75Showinfo_outline
13complement(3568441..3568821)PHAGE_Pseudo_YMC11/07/P54_PAE_BP_NC_030909: hypothetical protein; FAQ89_17555; phage(gi100020)2.48e-23Showinfo_outline
14complement(3568834..3569310)PHAGE_Pseudo_PS_1_NC_029066: hypothetical protein; FAQ89_17560; phage(gi985757717)4.93e-37Showinfo_outline
15complement(3569297..3569770)PHAGE_Pseudo_PAJU2_NC_011373: hypothetical protein; FAQ89_17565; phage(gi209552438)4.95e-46Showinfo_outline
16complement(3569792..3573178)PHAGE_Entero_BP_4795_NC_004813: putative tail component; FAQ89_17570; phage(gi157166052)0.0Showinfo_outline
17complement(3573239..3573472)PHAGE_Entero_HK022_NC_002166: gp20; FAQ89_17575; phage(gi9634138)3.87e-15Showinfo_outline
18complement(3573546..3573851)PHAGE_Entero_HK106_NC_019768: tail protein; FAQ89_17580; phage(gi428783291)7.49e-38Showinfo_outline
19complement(3573854..3574258)PHAGE_Entero_HK446_NC_019714: tail assembly chaperone; FAQ89_17585; phage(gi428782205)9.71e-46Showinfo_outline
20complement(3574289..3574993)PHAGE_Entero_mEp234_NC_019715: major tail subunit; FAQ89_17590; phage(gi428782264)8.96e-110Showinfo_outline
21complement(3575050..3575397)PHAGE_Entero_mEp390_NC_019721: hypothetical protein; FAQ89_17595; phage(gi428782673)2.48e-43Showinfo_outline
22complement(3575394..3575843)PHAGE_Entero_HK97_NC_002167: Gp10; FAQ89_17600; phage(gi9634169)8.79e-89Showinfo_outline
23complement(3575840..3576178)PHAGE_Entero_mEp234_NC_019715: head-tail connector II; FAQ89_17605; phage(gi428782261)1.33e-49Showinfo_outline
24complement(3576187..3576504)PHAGE_Shigel_SfII_NC_021857: head-tail connector protein; FAQ89_17610; phage(gi526244642)1.11e-25Showinfo_outline
25complement(3576582..3577820)PHAGE_Entero_SfV_NC_003444: capsid; FAQ89_17615; phage(gi19548995)0.0Showinfo_outline
26complement(3577830..3578429)PHAGE_Entero_SfV_NC_003444: capsid protease; FAQ89_17620; phage(gi19548994)1.57e-119Showinfo_outline
27complement(3578422..3579648)PHAGE_Entero_SfV_NC_003444: portal protein; FAQ89_17625; phage(gi19548993)0.0Showinfo_outline
28complement(3579796..3581547)PHAGE_Entero_mEp235_NC_019708: terminase large subunit; FAQ89_17630; phage(gi428781812)0.0Showinfo_outline
29complement(3581551..3582048)PHAGE_Entero_mEp235_NC_019708: terminase small subunit; FAQ89_17635; phage(gi428781811)4.92e-83Showinfo_outline
30complement(3582207..3582557)PHAGE_Entero_mEp235_NC_019708: putative HNH endonuclease; FAQ89_17640; phage(gi428781871)1.22e-65Showinfo_outline
313582630..3583085hypothetical protein; FAQ89_176450.0Showinfo_outline
32complement(3583121..3583246)PHAGE_Entero_SfI_NC_027339: Rz protein; FAQ89_17650; phage(gi849250282)2.54e-11Showinfo_outline
33complement(3583284..3583472)PHAGE_Acinet_Bphi_B1251_NC_019541: hypothetical protein; FAQ89_17655; phage(gi423262005)2.75e-28Showinfo_outline
34complement(3583585..3583782)PHAGE_Entero_mEp390_NC_019721: hypothetical protein; FAQ89_17660; phage(gi428782716)2.84e-19Showinfo_outline
35complement(3583733..3584008)PHAGE_Entero_mEp390_NC_019721: hypothetical protein; FAQ89_17665; phage(gi428782715)8.16e-41Showinfo_outline
36complement(3584011..3584640)PHAGE_Entero_mEp390_NC_019721: lysin; FAQ89_17670; phage(gi428782714)4.55e-110Showinfo_outline
37complement(3584640..3584921)PHAGE_Entero_mEp390_NC_019721: putative holin; FAQ89_17675; phage(gi428782713)2.19e-26Showinfo_outline
38complement(3584908..3585294)PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; FAQ89_17680; phage(gi100130)6.20e-77Showinfo_outline
39complement(3585534..3586139)hypothetical protein; FAQ89_176850.0Showinfo_outline
40complement(3586246..3586824)DUF1133 family protein; FAQ89_176900.0Showinfo_outline
41complement(3586838..3587818)PHAGE_Entero_mEp460_NC_019716: hypothetical protein; FAQ89_17695; phage(gi428782365)9.93e-169Showinfo_outline
42complement(3587831..3588208)PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; FAQ89_17700; phage(gi100062)2.27e-64Showinfo_outline
43complement(3588218..3589027)PHAGE_Salmon_118970_sal3_NC_031940: prohead core protein protease; FAQ89_17705; phage(gi100061)7.30e-140Showinfo_outline
44complement(3589024..3589938)PHAGE_Entero_mEp390_NC_019721: hypothetical protein; FAQ89_17710; phage(gi428782706)1.06e-33Showinfo_outline
45complement(3589895..3590107)PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; FAQ89_17715; phage(gi100119)6.69e-13Showinfo_outline
46complement(3590101..3590283)PHAGE_Shigel_SfII_NC_021857: hypothetical protein; FAQ89_17720; phage(gi526244674)5.28e-20Showinfo_outline
47complement(3590345..3590806)PHAGE_Entero_mEp390_NC_019721: hypothetical protein; FAQ89_17725; phage(gi428782704)4.27e-96Showinfo_outline
48complement(3590832..3591029)PHAGE_Entero_mEp390_NC_019721: prophage anti-repressor; FAQ89_17730; phage(gi428782702)1.47e-16Showinfo_outline
493591134..3591781PHAGE_Entero_mEp390_NC_019721: prophage repressor; FAQ89_17735; phage(gi428782701)3.26e-69Showinfo_outline
503592010..3592249PHAGE_Entero_mEp390_NC_019721: hypothetical protein; FAQ89_17740; phage(gi428782700)5.24e-32Showinfo_outline
513592628..3592927PHAGE_Entero_mEp390_NC_019721: hypothetical protein; FAQ89_17745; phage(gi428782699)1.07e-17Showinfo_outline
523592927..3593712PHAGE_Burkho_phi6442_NC_009235: gp57; FAQ89_17750; phage(gi134288621)3.41e-83Showinfo_outline
533593712..3594788PHAGE_Salmon_SPN1S_NC_016761: putative bacteriophage protein; FAQ89_17755; phage(gi374531224)3.93e-180Showinfo_outline
543595030..3595380PHAGE_Entero_mEp460_NC_019716: hypothetical protein; FAQ89_17760; phage(gi428782345)5.84e-63Showinfo_outline
553595380..3595592PHAGE_Vibrio_pYD38_A_NC_021534: hypothetical protein; FAQ89_17765; phage(gi514051013)1.15e-45Showinfo_outline
563595592..3596239PHAGE_Entero_UAB_Phi20_NC_031019: hypothetical protein; FAQ89_17770; phage(gi100055)1.76e-56Showinfo_outline
573596247..3596432PHAGE_Stx2_vB_EcoP_24B_NC_027984: excisionase; FAQ89_17775; phage(gi937456233)2.57e-21Showinfo_outline
58complement(3596448..3597386)PHAGE_Salmon_SSU5_NC_018843: hypothetical protein; FAQ89_17780; phage(gi410491447)2.99e-10Showinfo_outline
59complement(3597419..3598588)PHAGE_Stx2_c_86_NC_008464: integrase; FAQ89_17785; phage(gi116222028)0.0Showinfo_outline
603598783..3598806attR0.0Showinfo_outline
613598784..3598858tRNA0.0Showinfo_outline
623599107..3599589cupin fold metalloprotein, WbuC family; FAQ89_177950.0Showinfo_outline
633599956..3600837hypothetical protein; FAQ89_178000.0Showinfo_outline
64complement(3600847..3601755)PHAGE_Burkho_phi1026b_NC_005284: gp58; FAQ89_17805; phage(gi38707948)5.61e-07Showinfo_outline

Region 4, total 66 CDS

#CDS PositionBLAST HitE-ValueSequence
14321083..4321095attL0.0Showinfo_outline
2complement(4324055..4327123)PHAGE_Pseudo_PS_1_NC_029066: tail protein; FAQ89_21185; phage(gi985757719)7.39e-77Showinfo_outline
3complement(4327120..4327500)PHAGE_Pseudo_YMC11/07/P54_PAE_BP_NC_030909: hypothetical protein; FAQ89_21190; phage(gi100020)3.26e-22Showinfo_outline
4complement(4327510..4327992)PHAGE_Pseudo_D3_NC_002484: hypothetical protein; FAQ89_21195; phage(gi9635614)9.26e-37Showinfo_outline
5complement(4327979..4328452)PHAGE_Pseudo_PAJU2_NC_011373: hypothetical protein; FAQ89_21200; phage(gi209552438)1.05e-46Showinfo_outline
6complement(4328452..4331367)PHAGE_Pseudo_MP29_NC_011613: putative tail component protein; FAQ89_21205; phage(gi215480016)9.91e-66Showinfo_outline
7complement(4331947..4332345)PHAGE_Salmon_SEN5_NC_028701: hypothetical protein; FAQ89_21210; phage(gi966201587)7.86e-09Showinfo_outline
8complement(4332413..4332610)hypothetical protein; FAQ89_212150.0Showinfo_outline
9complement(4332748..4333230)PHAGE_Pseudo_phiPSA1_NC_024365: hypothetical protein; FAQ89_21220; phage(gi658307708)1.88e-11Showinfo_outline
10complement(4333285..4334457)PHAGE_Vibrio_VpKK5_NC_026610: tail subunit; FAQ89_21225; phage(gi764162154)2.59e-13Showinfo_outline
11complement(4334481..4334873)PHAGE_Acinet_Bphi_B1251_NC_019541: hypothetical protein; FAQ89_21230; phage(gi423262013)2.16e-19Showinfo_outline
12complement(4334870..4335421)PHAGE_Escher_HK639_NC_016158: hypothetical protein; FAQ89_21235; phage(gi356870610)1.67e-36Showinfo_outline
13complement(4335423..4335806)PHAGE_Pseudo_YMC11/02/R656_NC_028657: hypothetical protein; FAQ89_21240; phage(gi966197873)3.94e-28Showinfo_outline
14complement(4335793..4336026)hypothetical protein; FAQ89_212450.0Showinfo_outline
15complement(4336036..4336290)PHAGE_Salmon_SSU5_NC_018843: hypothetical protein; FAQ89_21250; phage(gi410491538)4.03e-28Showinfo_outline
16complement(4336292..4336687)PHAGE_Pseudo_PS_1_NC_029066: hypothetical protein; FAQ89_21255; phage(gi985757703)1.30e-19Showinfo_outline
17complement(4337009..4337962)PHAGE_Vibrio_pYD38_B_NC_021561: major capsid protein; FAQ89_21260; phage(gi514231589)6.45e-148Showinfo_outline
18complement(4337973..4338752)PHAGE_Xantho_Xp15_NC_007024: putative phage structural protein; FAQ89_21265; phage(gi66392059)5.43e-19Showinfo_outline
19complement(4339265..4340377)PHAGE_Pseudo_PS_1_NC_029066: head morphogenesis protein; FAQ89_21270; phage(gi985757697)1.44e-112Showinfo_outline
20complement(4340361..4341761)PHAGE_Paraco_vB_PmaS_IMEP1_NC_026608: portal protein; FAQ89_21275; phage(gi764162030)4.58e-82Showinfo_outline
21complement(4341763..4343076)PHAGE_Pseudo_YMC11/02/R656_NC_028657: hypothetical protein; FAQ89_21280; phage(gi966197881)0.0Showinfo_outline
22complement(4343060..4344055)PHAGE_Burkho_BcepMigl_NC_019917: terminase small subunit; FAQ89_21285; phage(gi431809885)5.26e-55Showinfo_outline
23complement(4344999..4345193)PHAGE_Escher_HK639_NC_016158: hypothetical protein; FAQ89_21290; phage(gi356870671)1.35e-19Showinfo_outline
24complement(4345144..4345419)PHAGE_Entero_mEp390_NC_019721: hypothetical protein; FAQ89_21295; phage(gi428782715)5.07e-35Showinfo_outline
25complement(4345416..4345760)PHAGE_Pseudo_vB_Pae_Kakheti25_NC_017864: holin; FAQ89_21300; phage(gi388542661)1.10e-09Showinfo_outline
26complement(4345757..4346296)PHAGE_Erwini_vB_EamP_S6_NC_019514: endolysin; FAQ89_21305; phage(gi422935930)1.85e-82Showinfo_outline
27complement(4346293..4346592)PHAGE_Salmon_ST64T_NC_004348: holin protein; FAQ89_21310; phage(gi24371577)1.02e-45Showinfo_outline
28complement(4346736..4346960)hypothetical protein; FAQ89_213150.0Showinfo_outline
29complement(4347350..4348171)PHAGE_Entero_mEp237_NC_019704: late gene regulator Q; FAQ89_21320; phage(gi435439320)2.13e-144Showinfo_outline
30complement(4348168..4348308)PHAGE_Entero_mEp237_NC_019704: hypothetical protein; FAQ89_21325; phage(gi435439319)1.29e-06Showinfo_outline
31complement(4348305..4348886)PHAGE_Entero_mEp213_NC_019720: NinG protein; FAQ89_21330; phage(gi428782653)3.34e-56Showinfo_outline
32complement(4348889..4349095)PHAGE_Entero_mEp237_NC_019704: hypothetical protein; FAQ89_21335; phage(gi435439316)3.14e-27Showinfo_outline
33complement(4349095..4349694)PHAGE_Entero_mEp237_NC_019704: hypothetical protein; FAQ89_21340; phage(gi435439315)4.88e-119Showinfo_outline
34complement(4349768..4349992)PHAGE_Phage_Gifsy_2_NC_010393: hypothetical bacteriophage protein; FAQ89_21345; phage(gi169257285)1.78e-13Showinfo_outline
35complement(4350856..4351188)hypothetical protein; FAQ89_213500.0Showinfo_outline
36complement(4351642..4351881)PHAGE_Escher_HK639_NC_016158: hypothetical protein; FAQ89_21355; phage(gi356870632)3.65e-12Showinfo_outline
37complement(4351874..4352137)PHAGE_Entero_YYZ_2008_NC_011356: hypothetical protein; FAQ89_21360; phage(gi209427731)2.41e-07Showinfo_outline
38complement(4352276..4352338)protein Eaa; FAQ89_213650.0Showinfo_outline
39complement(4353151..4353378)hypothetical protein; FAQ89_213700.0Showinfo_outline
40complement(4353378..4353644)PHAGE_Entero_P22_NC_002371: EaD; FAQ89_21375; phage(gi51236733)3.50e-07Showinfo_outline
41complement(4353637..4354134)hypothetical protein; FAQ89_213800.0Showinfo_outline
42complement(4354127..4354327)PHAGE_Salmon_g341c_NC_013059: mosaic protein; FAQ89_21385; phage(gi255252707)1.04e-13Showinfo_outline
43complement(4354324..4354806)PHAGE_Pectob_ZF40_NC_019522: putative methylase; FAQ89_21390; phage(gi422936660)4.60e-84Showinfo_outline
44complement(4354803..4355039)PHAGE_Entero_VT2phi_272_NC_028656: hypothetical protein; FAQ89_21395; phage(gi966197732)1.42e-44Showinfo_outline
45complement(4355032..4355235)PHAGE_Entero_VT2phi_272_NC_028656: hypothetical protein; FAQ89_21400; phage(gi966197733)3.17e-40Showinfo_outline
46complement(4355232..4355600)PHAGE_Salmon_SPN3UB_NC_019545: putative DNA-binding protein; FAQ89_21405; phage(gi423262429)1.61e-16Showinfo_outline
47complement(4355593..4356336)PHAGE_Salmon_SEN34_NC_028699: replication protein P; FAQ89_21410; phage(gi966201464)4.23e-105Showinfo_outline
48complement(4356333..4357253)PHAGE_Entero_mEp237_NC_019704: DNA replication protein O; FAQ89_21415; phage(gi435439307)3.74e-131Showinfo_outline
49complement(4357604..4358140)PHAGE_Entero_mEp237_NC_019704: CII protein; FAQ89_21420; phage(gi435439306)4.06e-73Showinfo_outline
50complement(4358143..4358370)PHAGE_Entero_mEp237_NC_019704: prophage anti-repressor; FAQ89_21425; phage(gi435439305)4.23e-10Showinfo_outline
514358475..4358909PHAGE_Phage_Gifsy_2_NC_010393: putative bacteriophage regulatory protein; repressor; Lambda gpCI analog; FAQ89_21430; phage(gi169257276)3.85e-44Showinfo_outline
524359093..4359191hypothetical protein; FAQ89_214350.0Showinfo_outline
534359298..4359489DUF1482 family protein; FAQ89_214400.0Showinfo_outline
544359498..4359653PHAGE_Entero_mEp237_NC_019704: hypothetical protein; FAQ89_21445; phage(gi435439297)1.22e-17Showinfo_outline
554359791..4362829PHAGE_Entero_mEp237_NC_019704: exonuclease; FAQ89_21450; phage(gi435439296)0.0Showinfo_outline
564362842..4363951PHAGE_Entero_mEp237_NC_019704: recombinase RecT; FAQ89_21455; phage(gi435439295)0.0Showinfo_outline
574363986..4364324hypothetical protein; FAQ89_214600.0Showinfo_outline
584364317..4364928PHAGE_Salmon_ST64T_NC_004348: hypothetical protein; FAQ89_21465; phage(gi24371543)1.88e-52Showinfo_outline
594364925..4365233PHAGE_Cronob_phiES15_NC_018454: hypothetical protein; FAQ89_21470; phage(gi401817569)1.73e-33Showinfo_outline
604365241..4365480PHAGE_Entero_mEp237_NC_019704: hypothetical protein; FAQ89_21475; phage(gi435439294)2.77e-32Showinfo_outline
614365490..4365804PHAGE_Entero_mEp237_NC_019704: hypothetical protein; FAQ89_21480; phage(gi435439293)4.48e-14Showinfo_outline
624365685..4365697attR0.0Showinfo_outline
63complement(4365701..4366888)PHAGE_Entero_mEp237_NC_019704: integrase; FAQ89_21485; phage(gi435439292)2.55e-151Showinfo_outline
644367065..4367955peptide ABC transporter permease SapC; FAQ89_214900.0Showinfo_outline
654367955..4368947PHAGE_Plankt_PaV_LD_NC_016564: ABC transporter; FAQ89_21495; phage(gi371496158)1.75e-09Showinfo_outline
664368949..4369758PHAGE_Bacill_G_NC_023719: gp245; FAQ89_21500; phage(gi593777701)1.90e-19Showinfo_outline

Region 5, total 14 CDS

#CDS PositionBLAST HitE-ValueSequence
14508392..4508403attL0.0Showinfo_outline
24508436..4509650PROPHAGE_Escher_CFT073: putative prophage integrase; FAQ89_22205; phage(gi26250313)0.0Showinfo_outline
34509719..4510315hypothetical protein; FAQ89_222100.0Showinfo_outline
44510483..4510680PHAGE_Entero_P4_NC_001609: transcriptional regulator; FAQ89_22215; phage(gi9627517)7.35e-08Showinfo_outline
54510781..4511173PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; FAQ89_22220; phage(gi100057)6.69e-19Showinfo_outline
64511152..4511397host cell division inhibitor Icd-like protein; FAQ89_222250.0Showinfo_outline
74511390..4512265integrase; FAQ89_222300.0Showinfo_outline
84512262..4512477hypothetical protein; FAQ89_222350.0Showinfo_outline
94512474..4512677PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; FAQ89_22240; phage(gi966201472)1.20e-17Showinfo_outline
104512688..4513002DUF4222 domain-containing protein; FAQ89_222450.0Showinfo_outline
114512999..4514762PHAGE_Entero_P4_NC_001609: DNA primase; FAQ89_22250; phage(gi9627512)4.88e-126Showinfo_outline
124515337..4516131hypothetical protein; FAQ89_222550.0Showinfo_outline
134517339..4518757PHAGE_Salmon_9NA_NC_025443: putative tail tape measure protein; FAQ89_22260; phage(gi712914006)1.94e-20Showinfo_outline
144520404..4520415attR0.0Showinfo_outline

Region 6, total 71 CDS

#CDS PositionBLAST HitE-ValueSequence
1complement(5220094..5222124)PHAGE_Acinet_vB_AbaP_PD_6A3_NC_028684: hypothetical protein; FAQ89_25985; phage(gi966200386)2.41e-09Showinfo_outline
2complement(5222181..5222378)hypothetical protein; FAQ89_259900.0Showinfo_outline
3complement(5222378..5223244)PHAGE_Salmon_SEN34_NC_028699: tail fiber protein; FAQ89_25995; phage(gi966201444)1.61e-26Showinfo_outline
4complement(5223244..5224017)PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; FAQ89_26000; phage(gi966201443)9.20e-91Showinfo_outline
5complement(5224014..5225210)PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; FAQ89_26005; phage(gi966201442)0.0Showinfo_outline
6complement(5225210..5225563)PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; FAQ89_26010; phage(gi966201441)1.47e-57Showinfo_outline
7complement(5225560..5226216)PHAGE_Salmon_SEN34_NC_028699: baseplate assembly protein; FAQ89_26015; phage(gi966201439)1.26e-109Showinfo_outline
8complement(5226545..5227270)hypothetical protein; FAQ89_260200.0Showinfo_outline
9complement(5227275..5228342)PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; FAQ89_26025; phage(gi966201436)0.0Showinfo_outline
10complement(5228345..5228647)PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; FAQ89_26030; phage(gi966201435)9.67e-34Showinfo_outline
11complement(5228648..5229223)PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; FAQ89_26035; phage(gi966201434)1.20e-92Showinfo_outline
12complement(5229223..5231220)PHAGE_Salmon_SEN34_NC_028699: tail tape measure protein; FAQ89_26040; phage(gi966201433)0.0Showinfo_outline
13complement(5231210..5231362)NTP pyrophosphohydrolase; FAQ89_260450.0Showinfo_outline
14complement(5231404..5231823)PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; FAQ89_26050; phage(gi966201432)4.09e-48Showinfo_outline
15complement(5231827..5232270)PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; FAQ89_26055; phage(gi966201431)1.41e-83Showinfo_outline
16complement(5232280..5233425)PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; FAQ89_26060; phage(gi966201430)4.66e-179Showinfo_outline
17complement(5233429..5233869)PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; FAQ89_26065; phage(gi966201429)1.29e-41Showinfo_outline
18complement(5233964..5234350)PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; FAQ89_26070; phage(gi966201428)8.98e-59Showinfo_outline
19complement(5234350..5234964)PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; FAQ89_26075; phage(gi966201427)2.70e-23Showinfo_outline
20complement(5234961..5235380)PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; FAQ89_26080; phage(gi966201426)2.15e-54Showinfo_outline
21complement(5235349..5235630)PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; FAQ89_26085; phage(gi966201425)1.33e-09Showinfo_outline
22complement(5235670..5236611)PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; FAQ89_26090; phage(gi966201424)6.02e-167Showinfo_outline
23complement(5236623..5237117)PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; FAQ89_26095; phage(gi966201423)1.50e-54Showinfo_outline
24complement(5237121..5238323)PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; FAQ89_26100; phage(gi966201422)6.42e-134Showinfo_outline
25complement(5238333..5238527)hypothetical protein; FAQ89_261050.0Showinfo_outline
26complement(5238573..5239121)PHAGE_Salmon_SEN34_NC_028699: putative head morphogenesis protein; FAQ89_26110; phage(gi966201421)5.90e-65Showinfo_outline
27complement(5239177..5240628)PHAGE_Salmon_SEN34_NC_028699: putative portal protein; FAQ89_26115; phage(gi966201420)0.0Showinfo_outline
28complement(5240866..5242266)PHAGE_Edward_GF_2_NC_026611: putative terminase large subunit; FAQ89_26120; phage(gi764162249)0.0Showinfo_outline
29complement(5242217..5242993)PHAGE_Entero_933W_NC_000924: putative small subunit terminase; FAQ89_26125; phage(gi9632516)6.08e-18Showinfo_outline
30complement(5243202..5243669)PHAGE_Salmon_HK620_NC_002730: endopeptidase; FAQ89_26130; phage(gi13559860)3.02e-77Showinfo_outline
31complement(5243666..5244169)PHAGE_Salmon_vB_SemP_Emek_NC_018275: lysin; FAQ89_26135; phage(gi399498856)7.25e-97Showinfo_outline
32complement(5244172..5244486)PHAGE_Salmon_SPN3UB_NC_019545: hypothetical protein; FAQ89_26140; phage(gi423262443)5.43e-62Showinfo_outline
33complement(5244755..5244831)tRNA0.0Showinfo_outline
34complement(5244837..5244912)tRNA0.0Showinfo_outline
35complement(5244918..5244993)tRNA0.0Showinfo_outline
36complement(5245000..5245074)tRNA0.0Showinfo_outline
37complement(5245193..5245965)hypothetical protein; FAQ89_261650.0Showinfo_outline
38complement(5245975..5247777)PHAGE_Acinet_vB_AbaP_PD_6A3_NC_028684: hypothetical protein; FAQ89_26170; phage(gi966200386)1.40e-09Showinfo_outline
39complement(5248008..5251067)PHAGE_Pseudo_PS_1_NC_029066: tail protein; FAQ89_26175; phage(gi985757719)1.36e-78Showinfo_outline
40complement(5251064..5251444)PHAGE_Pseudo_YMC11/07/P54_PAE_BP_NC_030909: hypothetical protein; FAQ89_26180; phage(gi100020)1.99e-21Showinfo_outline
41complement(5251454..5251936)PHAGE_Pseudo_D3_NC_002484: hypothetical protein; FAQ89_26185; phage(gi9635614)1.76e-36Showinfo_outline
42complement(5251923..5252402)PHAGE_Pseudo_PMG1_NC_016765: hypothetical protein; FAQ89_26190; phage(gi374531665)3.03e-45Showinfo_outline
43complement(5252402..5254948)PHAGE_Entero_mEpX2_NC_019705: tail length tape measure protein; FAQ89_26195; phage(gi428765628)1.08e-169Showinfo_outline
44complement(5255010..5255387)outer membrane protein assembly factor BamE; FAQ89_262000.0Showinfo_outline
45complement(5255451..5255714)PHAGE_Entero_HK140_NC_019710: tail protein gpT-like protein; FAQ89_26205; phage(gi428781953)1.14e-10Showinfo_outline
46complement(5255717..5256100)PHAGE_Entero_mEp235_NC_019708: tail assembly chaperone; FAQ89_26210; phage(gi428781823)1.87e-51Showinfo_outline
47complement(5256144..5256635)PHAGE_Entero_HK022_NC_002166: major tail subunit; FAQ89_26215; phage(gi9634131)1.31e-80Showinfo_outline
48complement(5256692..5257057)PHAGE_Entero_HK022_NC_002166: gp11; FAQ89_26220; phage(gi9634130)2.39e-62Showinfo_outline
49complement(5257054..5257593)PHAGE_Entero_mEp235_NC_019708: hypothetical protein; FAQ89_26225; phage(gi428781820)1.94e-103Showinfo_outline
50complement(5257586..5257918)PHAGE_Pseudo_PAJU2_NC_011373: putative head-tail adaptor; FAQ89_26230; phage(gi209552428)5.56e-37Showinfo_outline
51complement(5257920..5258117)PHAGE_Entero_HK140_NC_019710: hypothetical protein; FAQ89_26235; phage(gi428781947)1.39e-32Showinfo_outline
52complement(5258178..5258504)PHAGE_Entero_mEp235_NC_019708: head-tail connector II; FAQ89_26240; phage(gi428781817)7.58e-14Showinfo_outline
53complement(5258452..5258694)hypothetical protein; FAQ89_262450.0Showinfo_outline
54complement(5258731..5259894)PHAGE_Entero_HK106_NC_019768: major head subunit; FAQ89_26250; phage(gi428783284)0.0Showinfo_outline
55complement(5259906..5260586)PHAGE_Escher_HK75_NC_016160: prohead protease; FAQ89_26255; phage(gi356870681)1.08e-111Showinfo_outline
56complement(5260592..5261869)PHAGE_Entero_HK140_NC_019710: portal protein; FAQ89_26260; phage(gi428781942)0.0Showinfo_outline
57complement(5261872..5263404)PHAGE_Pseudo_PAJU2_NC_011373: putative terminase; FAQ89_26265; phage(gi209552421)0.0Showinfo_outline
58complement(5263414..5263848)PHAGE_Pseudo_PAJU2_NC_011373: hypothetical protein; FAQ89_26270; phage(gi209552420)7.67e-34Showinfo_outline
59complement(5263970..5264179)PHAGE_Escher_HK75_NC_016160: hypothetical protein; FAQ89_26275; phage(gi356870735)1.00e-11Showinfo_outline
60complement(5264192..5264482)PHAGE_Rhizob_16_3_NC_011103: holin; FAQ89_26280; phage(gi195546640)7.39e-25Showinfo_outline
61complement(5264554..5264760)DUF551 domain-containing protein; FAQ89_262850.0Showinfo_outline
62complement(5264832..5265077)PHAGE_Salmon_SPN9CC_NC_017985: hypothetical protein; FAQ89_26290; phage(gi389060534)3.22e-10Showinfo_outline
63complement(5265142..5265342)PHAGE_Entero_mEp390_NC_019721: hypothetical protein; FAQ89_26295; phage(gi428782717)1.65e-23Showinfo_outline
64complement(5265374..5265565)PHAGE_Entero_mEp390_NC_019721: hypothetical protein; FAQ89_26300; phage(gi428782716)3.40e-18Showinfo_outline
65complement(5265516..5265791)PHAGE_Entero_mEp390_NC_019721: hypothetical protein; FAQ89_26305; phage(gi428782715)1.38e-42Showinfo_outline
66complement(5265799..5266428)PHAGE_Escher_HK639_NC_016158: endochitinase; FAQ89_26310; phage(gi356870669)8.22e-137Showinfo_outline
67complement(5266428..5266709)PHAGE_Entero_mEp390_NC_019721: putative holin; FAQ89_26315; phage(gi428782713)4.03e-50Showinfo_outline
68complement(5266696..5267091)PHAGE_Entero_mEp390_NC_019721: putative holin; FAQ89_26320; phage(gi428782712)1.26e-84Showinfo_outline
69complement(5267208..5267324)terminase small subunit; FAQ89_263250.0Showinfo_outline
705267654..5268100PHAGE_Shigel_SfIV_NC_022749: hypothetical protein; FAQ89_26330; phage(gi557307562)1.49e-07Showinfo_outline
71complement(5268006..5268263)PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; FAQ89_26335; phage(gi23505494)3.19e-34Showinfo_outline

Region 7, total 15 CDS

#CDS PositionBLAST HitE-ValueSequence
15355825..5355837attL0.0Showinfo_outline
2complement(5357145..5357642)PHAGE_Bacill_Bp8p_C_NC_029121: putative dihydrofolate reductase; FAQ89_26835; phage(gi985761486)1.16e-33Showinfo_outline
35357787..5358800PHAGE_Mycoba_Shipwreck_NC_031261: hypothetical protein; FAQ89_26840; phage(gi100032)1.63e-11Showinfo_outline
45358745..5359002hypothetical protein; FAQ89_268450.0Showinfo_outline
55359003..5359353DUF3330 domain-containing protein; FAQ89_268500.0Showinfo_outline
65359479..5360039PHAGE_Salmon_SJ46_NC_031129: prohead core protein protease; FAQ89_26855; phage(gi100061)7.62e-69Showinfo_outline
75360042..5363008PHAGE_Salmon_SJ46_NC_031129: hypothetical protein; FAQ89_26860; phage(gi100060)0.0Showinfo_outline
85363075..5363452GNAT family N-acetyltransferase; FAQ89_268650.0Showinfo_outline
9complement(5363653..5363922)PHAGE_Stx2_vB_EcoP_24B_NC_027984: Cat; FAQ89_26870; phage(gi937456276)1.38e-61Showinfo_outline
105364063..5364923PHAGE_Salmon_SJ46_NC_031129: hypothetical protein; FAQ89_26875; phage(gi100066)5.20e-57Showinfo_outline
115365097..5365794PHAGE_Entero_P1_NC_005856: InsA; FAQ89_26880; phage(gi46401643)3.04e-60Showinfo_outline
125365873..5366570PHAGE_Entero_P1_NC_005856: InsA; FAQ89_26885; phage(gi46401643)4.12e-58Showinfo_outline
13complement(5366586..5368829)PHAGE_Salmon_SJ46_NC_031129: hypothetical protein; FAQ89_26890; phage(gi100060)1.92e-133Showinfo_outline
145368924..5369529PHAGE_Clostr_vB_CpeS_CP51_NC_021325: putative resolvase; FAQ89_26895; phage(gi509140089)1.47e-21Showinfo_outline
155381493..5381505attR0.0Showinfo_outline

Region 8, total 26 CDS

#CDS PositionBLAST HitE-ValueSequence
15421927..5422943PHAGE_Bacill_BMBtpLA_NC_028748: IS5 transposase and trans-activator; FAQ89_27210; phage(gi971482498)0.0Showinfo_outline
25423171..5423488type I deoxyribonuclease HsdR; FAQ89_272150.0Showinfo_outline
3complement(5423438..5423851)PHAGE_Shigel_Sf6_NC_005344: putative transposase OrfB; FAQ89_27220; phage(gi41057343)6.26e-93Showinfo_outline
4complement(5423775..5424134)PHAGE_Salmon_SJ46_NC_031129: packaging and recombination endonuclease VII; FAQ89_27225; phage(gi100078)3.48e-58Showinfo_outline
5complement(5424162..5424341)PHAGE_Entero_P1_NC_005856: PdcA; FAQ89_27230; phage(gi46401726)4.86e-34Showinfo_outline
6complement(5424346..5424726)PHAGE_Salmon_SJ46_NC_031129: peptidase inhibitor; FAQ89_27235; phage(gi100080)3.29e-86Showinfo_outline
7complement(5424726..5424947)PHAGE_Salmon_SJ46_NC_031129: hypothetical protein; FAQ89_27240; phage(gi100081)3.62e-46Showinfo_outline
85425130..5426410PHAGE_Acinet_Bphi_B1251_NC_019541: putative restriction-modification protein; FAQ89_27245; phage(gi423261981)3.08e-16Showinfo_outline
9complement(5426420..5426480)PHAGE_Shigel_SfIV_NC_022749: IS1 transposase B; FAQ89_27250; phage(gi557307573)4.00e-06Showinfo_outline
105426903..5427106PHAGE_Salmon_118970_sal4_NC_030919: hypothetical protein; FAQ89_27255; phage(gi100018)5.08e-27Showinfo_outline
11complement(5427472..5427837)hypothetical protein; FAQ89_272600.0Showinfo_outline
12complement(5428099..5428218)hypothetical protein; FAQ89_272650.0Showinfo_outline
13complement(5428279..5428938)PHAGE_Entero_HK140_NC_019710: prophage repressor; FAQ89_27270; phage(gi428781988)8.26e-96Showinfo_outline
145429047..5429265PHAGE_Salmon_g341c_NC_013059: Cro; FAQ89_27275; phage(gi255252725)3.24e-19Showinfo_outline
155429305..5429526PHAGE_Entero_SfI_NC_027339: cII protein; FAQ89_27280; phage(gi849250270)9.88e-10Showinfo_outline
165429612..5430409PHAGE_Escher_vB_EcoM_ep3_NC_025430: transcriptional regulator; FAQ89_27285; phage(gi712913221)6.24e-73Showinfo_outline
175430469..5431434PHAGE_Entero_SfI_NC_027339: replication protein O; FAQ89_27290; phage(gi849250271)1.55e-43Showinfo_outline
185431431..5432168PHAGE_Entero_SfI_NC_027339: replication protein P; FAQ89_27295; phage(gi849250272)1.68e-105Showinfo_outline
195432165..5432467PHAGE_Serrat_phiMAM1_NC_020083: putative transcriptional regulator-HTH domain; FAQ89_27300; phage(gi440789434)3.32e-06Showinfo_outline
205432464..5432886PHAGE_Vibrio_pYD38_A_NC_021534: hypothetical protein; FAQ89_27305; phage(gi514051016)2.06e-17Showinfo_outline
215432883..5433004PHAGE_Salmon_ST64T_NC_004348: hypothetical protein; FAQ89_27310; phage(gi24371562)3.40e-13Showinfo_outline
22complement(5433273..5433605)PHAGE_Lactob_Lj771_NC_010179: MazF-like protein; FAQ89_27315; phage(gi163932202)2.22e-13Showinfo_outline
23complement(5433607..5433864)antitoxin PemI; FAQ89_273200.0Showinfo_outline
24complement(5433957..5434610)CPBP family intramembrane metalloprotease; FAQ89_273250.0Showinfo_outline
25complement(5434800..5435186)hypothetical protein; FAQ89_273300.0Showinfo_outline
265435534..5438551PROPHAGE_Xantho_306: Tn5044 transposase; FAQ89_27335; phage(gi21243163)3.38e-94Showinfo_outline

Region 9, total 21 CDS

#CDS PositionBLAST HitE-ValueSequence
15449641..5450051PHAGE_Xantho_vB_XveM_DIBBI_NC_017981: putative AraC family transcriptional regulator; FAQ89_27420; phage(gi389060447)3.00e-07Showinfo_outline
2complement(5450067..5451230)PROPHAGE_Shewan_MR-1: ISSod3, transposase; FAQ89_27425; phage(gi24375070)4.52e-141Showinfo_outline
3complement(5451245..5451325)PHAGE_Shigel_SfIV_NC_022749: IS1 transposase B; FAQ89_27430; phage(gi557307573)4.26e-11Showinfo_outline
4complement(5451326..5451447)PHAGE_Salmon_ST64T_NC_004348: hypothetical protein; FAQ89_27435; phage(gi24371562)3.40e-13Showinfo_outline
5complement(5451444..5451896)PHAGE_Vibrio_pYD38_A_NC_021534: hypothetical protein; FAQ89_27440; phage(gi514051016)3.11e-19Showinfo_outline
6complement(5452133..5452426)PHAGE_Entero_933W_NC_000924: Ren protein; FAQ89_27445; phage(gi9632496)4.76e-37Showinfo_outline
7complement(5452423..5453271)PHAGE_Entero_mEpX1_NC_019709: putative replication protein DnaC; FAQ89_27450; phage(gi428781919)5.96e-118Showinfo_outline
8complement(5453268..5454164)PHAGE_Entero_mEpX1_NC_019709: DNA replication protein O; FAQ89_27455; phage(gi428781918)2.61e-90Showinfo_outline
9complement(5454161..5454958)PHAGE_Escher_vB_EcoM_ep3_NC_025430: transcriptional regulator; FAQ89_27460; phage(gi712913221)3.29e-71Showinfo_outline
10complement(5454993..5455277)PHAGE_Entero_IME10_NC_019501: cII; FAQ89_27465; phage(gi422934270)2.98e-22Showinfo_outline
11complement(5455298..5455510)PHAGE_Salmon_ST160_NC_014900: Cro; FAQ89_27470; phage(gi318065926)2.81e-12Showinfo_outline
125455619..5456215PHAGE_Escher_HK639_NC_016158: cI; FAQ89_27475; phage(gi356870650)1.28e-10Showinfo_outline
135456782..5456943replication initiation protein; FAQ89_274800.0Showinfo_outline
14complement(5457096..5457752)RloB domain-containing protein; FAQ89_274850.0Showinfo_outline
15complement(5457709..5459064)PHAGE_Oenoco_phi9805_NC_023559: transporter; FAQ89_27490; phage(gi589286180)3.65e-09Showinfo_outline
16complement(5459697..5459909)MbeD family mobilization/exclusion protein; FAQ89_274950.0Showinfo_outline
17complement(5459913..5460398)mobilization protein; FAQ89_275000.0Showinfo_outline
18complement(5460376..5461113)nuclease; FAQ89_275050.0Showinfo_outline
19complement(5461076..5461417)MobC family plasmid mobilization relaxosome protein; FAQ89_275100.0Showinfo_outline
205461691..5462008hypothetical protein; FAQ89_275150.0Showinfo_outline
21complement(5462011..5463843)PHAGE_Salmon_SJ46_NC_031129: hypothetical protein; FAQ89_27520; phage(gi100060)1.08e-49Showinfo_outline

Region 10, total 26 CDS

#CDS PositionBLAST HitE-ValueSequence
15483778..5483790attL0.0Showinfo_outline
25497238..5497314PHAGE_Entero_P1_NC_005856: InsA; FAQ89_27780; phage(gi46401643)1.29e-10Showinfo_outline
3complement(5498695..5499504)PHAGE_Phage_Gifsy_2_NC_010393: prophage antitermination protein; late gene regulator; Lamba gpQ homolog; FAQ89_27790; phage(gi169257290)1.32e-77Showinfo_outline
4complement(5499501..5499641)PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; FAQ89_27795; phage(gi169257289)2.36e-06Showinfo_outline
5complement(5499701..5500114)PHAGE_Salmon_SJ46_NC_031129: hypothetical protein; FAQ89_27800; phage(gi100093)5.26e-06Showinfo_outline
6complement(5500585..5500746)DUF551 domain-containing protein; FAQ89_278050.0Showinfo_outline
7complement(5500852..5501448)PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; FAQ89_27810; phage(gi169257286)6.91e-62Showinfo_outline
8complement(5501606..5501854)PHAGE_Stx2_c_1717_NC_011357: hypothetical protein; FAQ89_27815; phage(gi209447155)2.90e-14Showinfo_outline
9complement(5502822..5503015)PHAGE_Escher_phiV10_NC_007804: hypothetical protein; FAQ89_27825; phage(gi89152466)1.53e-14Showinfo_outline
10complement(5503135..5503338)hypothetical protein; FAQ89_278300.0Showinfo_outline
11complement(5503547..5503762)PHAGE_Salmon_SPN1S_NC_016761: hypothetical protein; FAQ89_27835; phage(gi374531241)2.45e-34Showinfo_outline
12complement(5503848..5504303)PHAGE_Entero_HK225_NC_019717: NinB protein; FAQ89_27840; phage(gi428782436)1.64e-71Showinfo_outline
135504618..5505405transketolase; FAQ89_278450.0Showinfo_outline
14complement(5505406..5505721)PHAGE_Escher_pro483_NC_028943: DNA invertase; FAQ89_27850; phage(gi971758535)1.16e-19Showinfo_outline
155505885..5506097DUF4158 domain-containing protein; FAQ89_278550.0Showinfo_outline
165506171..5506251PHAGE_Shigel_SfIV_NC_022749: IS1 transposase B; FAQ89_27860; phage(gi557307573)1.09e-10Showinfo_outline
17complement(5506281..5506826)PROPHAGE_Xantho_33913: Tn5041 transposase; FAQ89_27865; phage(gi21231545)6.90e-19Showinfo_outline
18complement(5506969..5507575)PROPHAGE_Brucel_1330: transposase, putative; FAQ89_27870; phage(gi23502708)8.09e-39Showinfo_outline
19complement(5507576..5508213)elongation factor Tu; FAQ89_278750.0Showinfo_outline
205508070..5508082attR0.0Showinfo_outline
21complement(5508303..5508778)Tn3-like element Tn3 family transposase; FAQ89_278800.0Showinfo_outline
225508779..5509222hypothetical protein; FAQ89_278850.0Showinfo_outline
23complement(5509318..5509694)PHAGE_Phage_Gifsy_2_NC_010393: NinG; FAQ89_27890; phage(gi169257288)2.00e-25Showinfo_outline
24complement(5509687..5509848)PHAGE_Escher_HK639_NC_016158: NinE; FAQ89_27895; phage(gi356870663)2.26e-20Showinfo_outline
255509956..5510018LysR family transcriptional regulator; FAQ89_279000.0Showinfo_outline
265510371..5510689PHAGE_Salmon_SJ46_NC_031129: prohead core protein protease; FAQ89_27905; phage(gi100061)1.13e-08Showinfo_outline
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Intact (score > 90)
Questionable (score 70-90)
Incomplete (score < 70)

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Length: 5510890 bps
Phages: 10
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