Submission Results

Sequence Name: Not Available

GenBank Accession Number: STBH00000000.1

GenInfo (GI) Number: 0000000000

Download Results: STBH00000000.1.PHASTER.zip

gi|00000000|ref|STBH00000000.1| Klebsiella pneumoniae subsp. pneumoniae strain SIKP057, whole 5567509, gc%: 57.19%

Download summary as .txt file: summary.txt file_download

Total: 11 prophage regions have been identified, of which 6 regions are intact, 5 regions are incomplete, and 0 regions are questionable.

RegionRegion LengthCompletenessScore# Total ProteinsRegion PositionMost Common PhageGC %Details
17.1Kbincomplete3010780676-787872 info_outlinePHAGE_Mycoba_RhynO_NC_023609(1)55.52%Show info_outline
238.3Kbintact150433006814-3045152 info_outlinePHAGE_Salmon_SEN4_NC_029015(21)50.06%Show info_outline
357.6Kbintact130694229807-4287413 info_outlinePHAGE_Entero_mEp237_NC_019704(13)53.73%Show info_outline
412Kbincomplete40124425554-4437566 info_outlinePHAGE_Entero_P4_NC_001609(2)49.85%Show info_outline
538.2Kbintact150534837583-4875786 info_outlinePHAGE_Entero_mEp390_NC_019721(11)51.25%Show info_outline
649Kbintact150685234755-5283771 info_outlinePHAGE_Salmon_SEN34_NC_028699(23)53.63%Show info_outline
734.5Kbintact130405290604-5325164 info_outlinePHAGE_Entero_HK140_NC_019710(12)51.98%Show info_outline
838.8Kbincomplete60355367764-5406563 info_outlinePHAGE_Entero_VT2_Sakai_NC_000902(6)53.60%Show info_outline
912.9Kbincomplete40195408478-5421417 info_outlinePHAGE_Entero_HK140_NC_019710(3)54.54%Show info_outline
109.4Kbincomplete60175446588-5456006 info_outlinePHAGE_Cronob_ENT47670_NC_019927(5)50.98%Show info_outline
1134.8Kbintact130415532570-5567427 info_outlinePHAGE_Salmon_SPN3UB_NC_019545(5)51.91%Show info_outline
Intact (score > 90)
Questionable (score 70-90)
Incomplete (score < 70)
Region: The number assigned to the region.
Region Length: The length of the sequence of that region (in bp).
Completeness: A prediction of whether the region contains a intact or incomplete prophage based on the above criteria.
Score: The score of the region based on the above criteria.
# Total Proteins: The number of ORFs present in the region.
Region Position: The start and end positions of the region on the bacterial chromosome.
Most Common Phage: The phage(s) with the highest number of proteins most similar to those in the region.
GC %: The percentage of GC nucleotides of the region.

Criteria for scoring prophage regions (as intact, questionable, or incomplete):
Method 1:

  1. If the number of certain phage organism in this table is more than or equal to 100% of the total number of CDS of the region, the region is marked with total score 150. If less than 100%, method 2 and 3 will be used.
Method 2:
  1. If the number of certain phage organism in this table is more than 50% of the total number of CDS of the region, that phage organism is considered as the major potential phage for that region; the percentage of the total number of that phage organism in this table in the total number of proteins of the region is calculated and then multipled by 100; the percentage of the length of that phage organism in this table in the length of the region is calculated and then multipled by 50 (phage head's encapsulation capability is considered).
Method 3:
  1. If any of the specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin') are present, the score will be increased by 10 for each keyword found.
  2. If the size of the region is greater than 30 Kb, the score will be increased by 10.
  3. If there are at least 40 proteins in the region, the score will be increased by 10.
  4. If all of the phage-related proteins and hypothetical proteins constitute more than 70% of the total number of proteins in the region, the score will be increased by 10.
Compared the total score of method 2 with the total score of method 3, the bigger one is chosen as the total score of the region.
If the region's total score is less than 70, it is marked as incomplete; if between 70 to 90, it is marked as questionable; if greater than 90, it is marked as intact.

gi|00000000|ref|STBH00000000.1| Klebsiella pneumoniae subsp. pneumoniae strain SIKP057, whole 5567509, gc%: 57.19%

Download details as .txt file: detail.txt file_download

Hits against Virus and Prophage Database
Hits against Bacterial Database or GenBank File

Region 1, total 10 CDS

#CDS PositionBLAST HitE-ValueSequence
1complement(780676..781545)PHAGE_Strept_phiARI0923_NC_030946: hypothetical protein; FAR04_03885; phage(gi100029)1.67e-08Showinfo_outline
2complement(781542..781793)hypothetical protein; FAR04_038900.0Showinfo_outline
3complement(781928..782047)PHAGE_Erwini_ENT90_NC_019932: phage virion morphogenesis protein; FAR04_03895; phage(gi431810964)2.17e-10Showinfo_outline
4complement(782059..782442)PROPHAGE_Escher_CFT073: putative transposase; FAR04_03900; phage(gi26246170)7.58e-82Showinfo_outline
5782527..782874hypothetical protein; FAR04_039050.0Showinfo_outline
6782944..784047phosphotransferase; FAR04_039100.0Showinfo_outline
7complement(784044..785015)PHAGE_Bacill_SP_15_NC_031245: hypothetical protein; FAR04_03915; phage(gi100150)8.65e-15Showinfo_outline
8complement(785222..786058)PHAGE_Mycoba_RhynO_NC_023609: hydrolase; FAR04_03920; phage(gi589893746)6.38e-16Showinfo_outline
9complement(786251..786826)hypothetical protein; FAR04_039250.0Showinfo_outline
10786958..787872PHAGE_Burkho_phi1026b_NC_005284: gp58; FAR04_03930; phage(gi38707948)9.18e-21Showinfo_outline

Region 2, total 45 CDS

#CDS PositionBLAST HitE-ValueSequence
13006814..3006831attL0.0Showinfo_outline
2complement(3006927..3007178)PHAGE_Entero_186_NC_001317: B protein; FAR04_14715; phage(gi9634083)1.06e-12Showinfo_outline
3complement(3007222..3008361)PHAGE_Salmon_SEN4_NC_029015: late control D protein; FAR04_14720; phage(gi971765856)2.24e-154Showinfo_outline
43008516..3009688PHAGE_Salmon_SEN4_NC_029015: tail sheath monomer; FAR04_14725; phage(gi971765854)7.82e-157Showinfo_outline
53009688..3010203PHAGE_Salmon_SEN4_NC_029015: major tail tube protein; FAR04_14730; phage(gi971765853)3.87e-48Showinfo_outline
63010249..3010566PHAGE_Salmon_SEN4_NC_029015: tail protein; FAR04_14735; phage(gi971765852)8.38e-19Showinfo_outline
73010566..3010724PHAGE_Entero_P88_NC_026014: tail fiber protein; FAR04_14740; phage(gi744692746)5.77e-17Showinfo_outline
83010711..3013686PHAGE_Salmon_SEN4_NC_029015: tail length tape-measure protein; FAR04_14745; phage(gi971765850)5.13e-74Showinfo_outline
93013702..3014175PHAGE_Entero_P88_NC_026014: tail protein; FAR04_14750; phage(gi744692744)6.19e-72Showinfo_outline
10complement(3014639..3015301)hypothetical protein; FAR04_147550.0Showinfo_outline
11complement(3015319..3016542)PHAGE_Entero_RB49_NC_005066: hypothetical protein; FAR04_14760; phage(gi33620548)1.13e-09Showinfo_outline
12complement(3017142..3018239)PHAGE_Salmon_SEN4_NC_029015: tail fiber protein; FAR04_14765; phage(gi971765845)1.80e-11Showinfo_outline
13complement(3018239..3018451)hypothetical protein; FAR04_147700.0Showinfo_outline
14complement(3018448..3021474)PHAGE_Escher_vB_EcoM_ep3_NC_025430: tail protein; FAR04_14775; phage(gi712913209)6.45e-31Showinfo_outline
15complement(3021464..3022387)PHAGE_Entero_P88_NC_026014: baseplate assembly protein J; FAR04_14780; phage(gi744692737)1.25e-70Showinfo_outline
16complement(3022389..3022739)PHAGE_Entero_P88_NC_026014: lysozyme family baseplate assembly protein; FAR04_14785; phage(gi744692736)2.18e-37Showinfo_outline
17complement(3022736..3023323)PHAGE_Salmon_SEN4_NC_029015: baseplate assembly protein V; FAR04_14790; phage(gi971765841)2.67e-59Showinfo_outline
18complement(3023320..3023955)PHAGE_Salmon_SEN4_NC_029015: tail completion protein; FAR04_14795; phage(gi971765839)1.96e-62Showinfo_outline
19complement(3023952..3024419)PHAGE_Salmon_SEN4_NC_029015: tail protein; FAR04_14800; phage(gi971765838)4.06e-24Showinfo_outline
20complement(3024420..3024695)PHAGE_Entero_SfV_NC_003444: putative Rz1 lytic protein; FAR04_14805; phage(gi19549039)5.41e-09Showinfo_outline
21complement(3024601..3024930)DUF2570 domain-containing protein; FAR04_148100.0Showinfo_outline
22complement(3024942..3025487)PHAGE_Mannhe_vB_MhS_535AP2_NC_028853: endolysin; FAR04_14815; phage(gi971749661)1.53e-42Showinfo_outline
23complement(3025484..3025768)phage tail protein; FAR04_148200.0Showinfo_outline
24complement(3025759..3025959)PHAGE_Salmon_SEN4_NC_029015: tail component protein; FAR04_14825; phage(gi971765834)1.39e-20Showinfo_outline
25complement(3025959..3026474)PHAGE_Salmon_SEN4_NC_029015: head completion-stabilization protein; FAR04_14830; phage(gi971765833)3.14e-46Showinfo_outline
26complement(3026587..3027444)PHAGE_Salmon_SEN4_NC_029015: terminase endonuclease subunit; FAR04_14835; phage(gi971765832)2.44e-66Showinfo_outline
27complement(3027494..3028528)PHAGE_Salmon_SEN4_NC_029015: major capsid protein; FAR04_14840; phage(gi971765831)4.46e-125Showinfo_outline
28complement(3028538..3029377)PHAGE_Salmon_SEN4_NC_029015: capsid scaffolding protein; FAR04_14845; phage(gi971765830)5.10e-63Showinfo_outline
293029534..3031261PHAGE_Salmon_SEN4_NC_029015: terminase ATPase subunit; FAR04_14850; phage(gi971765829)0.0Showinfo_outline
303031255..3032316PHAGE_Salmon_SEN4_NC_029015: portal vertex protein; FAR04_14855; phage(gi971765828)1.90e-129Showinfo_outline
313033161..3033952hypothetical protein; FAR04_148600.0Showinfo_outline
323033952..3036222DNA helicase UvrD; FAR04_148650.0Showinfo_outline
33complement(3036513..3039094)PHAGE_Salmon_SEN4_NC_029015: replication protein; FAR04_14870; phage(gi971765822)0.0Showinfo_outline
34complement(3039112..3040068)PHAGE_Salmon_SEN4_NC_029015: methyl-directed repair DNA adenine methylase; FAR04_14875; phage(gi971765820)4.29e-104Showinfo_outline
35complement(3040065..3040292)hypothetical protein; FAR04_148800.0Showinfo_outline
36complement(3040301..3040867)PHAGE_Yersin_PY54_NC_005069: exonuclease; FAR04_14885; phage(gi33770559)1.24e-20Showinfo_outline
37complement(3040864..3041088)hypothetical protein; FAR04_148900.0Showinfo_outline
38complement(3041157..3041429)hypothetical protein; FAR04_148950.0Showinfo_outline
39complement(3041445..3041822)hypothetical protein; FAR04_149000.0Showinfo_outline
40complement(3041838..3042056)PHAGE_Salmon_SEN4_NC_029015: hypothetical protein; FAR04_14905; phage(gi971765866)7.18e-10Showinfo_outline
41complement(3042077..3042355)PHAGE_Salmon_SEN4_NC_029015: regulatory protein Cox; FAR04_14910; phage(gi971765864)2.58e-25Showinfo_outline
423042476..3042775PHAGE_Entero_P2_NC_001895: gpC; FAR04_14915; phage(gi9630358)2.41e-38Showinfo_outline
433042891..3043874PHAGE_Salmon_SEN4_NC_029015: integrase; FAR04_14920; phage(gi971765859)2.93e-118Showinfo_outline
443043990..3044007attR0.0Showinfo_outline
453044139..3045152PHAGE_Bacill_G_NC_023719: gp350; FAR04_14925; phage(gi593777806)5.15e-18Showinfo_outline

Region 3, total 71 CDS

#CDS PositionBLAST HitE-ValueSequence
14229807..4229821attL0.0Showinfo_outline
2complement(4236653..4237462)PHAGE_Bacill_G_NC_023719: gp245; FAR04_20655; phage(gi593777701)1.90e-19Showinfo_outline
3complement(4237464..4238456)PHAGE_Plankt_PaV_LD_NC_016564: ABC transporter; FAR04_20660; phage(gi371496158)1.75e-09Showinfo_outline
4complement(4238456..4239346)peptide ABC transporter permease SapC; FAR04_206650.0Showinfo_outline
54239523..4240710PHAGE_Entero_mEp237_NC_019704: integrase; FAR04_20670; phage(gi435439292)2.55e-151Showinfo_outline
6complement(4240607..4240921)PHAGE_Entero_mEp237_NC_019704: hypothetical protein; FAR04_20675; phage(gi435439293)4.48e-14Showinfo_outline
7complement(4240931..4241170)PHAGE_Entero_mEp237_NC_019704: hypothetical protein; FAR04_20680; phage(gi435439294)2.77e-32Showinfo_outline
8complement(4241178..4241486)PHAGE_Cronob_phiES15_NC_018454: hypothetical protein; FAR04_20685; phage(gi401817569)1.73e-33Showinfo_outline
9complement(4241483..4242094)PHAGE_Salmon_ST64T_NC_004348: hypothetical protein; FAR04_20690; phage(gi24371543)1.88e-52Showinfo_outline
10complement(4242087..4242425)hypothetical protein; FAR04_206950.0Showinfo_outline
11complement(4242460..4243569)PHAGE_Entero_mEp237_NC_019704: recombinase RecT; FAR04_20700; phage(gi435439295)0.0Showinfo_outline
12complement(4243582..4246620)PHAGE_Entero_mEp237_NC_019704: exonuclease; FAR04_20705; phage(gi435439296)0.0Showinfo_outline
13complement(4246758..4246913)PHAGE_Entero_mEp237_NC_019704: hypothetical protein; FAR04_20710; phage(gi435439297)1.22e-17Showinfo_outline
14complement(4246922..4247113)DUF1482 family protein; FAR04_207150.0Showinfo_outline
15complement(4247220..4247318)hypothetical protein; FAR04_207200.0Showinfo_outline
16complement(4247502..4247936)PHAGE_Phage_Gifsy_2_NC_010393: putative bacteriophage regulatory protein; repressor; Lambda gpCI analog; FAR04_20725; phage(gi169257276)3.85e-44Showinfo_outline
174248041..4248268PHAGE_Entero_mEp237_NC_019704: prophage anti-repressor; FAR04_20730; phage(gi435439305)4.23e-10Showinfo_outline
184248271..4248807PHAGE_Entero_mEp237_NC_019704: CII protein; FAR04_20735; phage(gi435439306)4.06e-73Showinfo_outline
194249158..4250078PHAGE_Entero_mEp237_NC_019704: DNA replication protein O; FAR04_20740; phage(gi435439307)3.74e-131Showinfo_outline
204250075..4250818PHAGE_Salmon_SEN34_NC_028699: replication protein P; FAR04_20745; phage(gi966201464)4.23e-105Showinfo_outline
214250811..4251179PHAGE_Salmon_SPN3UB_NC_019545: putative DNA-binding protein; FAR04_20750; phage(gi423262429)1.61e-16Showinfo_outline
224251176..4251379PHAGE_Entero_VT2phi_272_NC_028656: hypothetical protein; FAR04_20755; phage(gi966197733)3.17e-40Showinfo_outline
234251372..4251608PHAGE_Entero_VT2phi_272_NC_028656: hypothetical protein; FAR04_20760; phage(gi966197732)1.42e-44Showinfo_outline
244251605..4252087PHAGE_Pectob_ZF40_NC_019522: putative methylase; FAR04_20765; phage(gi422936660)4.60e-84Showinfo_outline
254252084..4252284PHAGE_Salmon_g341c_NC_013059: mosaic protein; FAR04_20770; phage(gi255252707)1.04e-13Showinfo_outline
264252277..4252774hypothetical protein; FAR04_207750.0Showinfo_outline
274252767..4253033PHAGE_Entero_P22_NC_002371: EaD; FAR04_20780; phage(gi51236733)3.50e-07Showinfo_outline
284253033..4253260hypothetical protein; FAR04_207850.0Showinfo_outline
294254073..4254135protein Eaa; FAR04_207900.0Showinfo_outline
304254274..4254537PHAGE_Entero_YYZ_2008_NC_011356: hypothetical protein; FAR04_20795; phage(gi209427731)2.41e-07Showinfo_outline
314254530..4254769PHAGE_Escher_HK639_NC_016158: hypothetical protein; FAR04_20800; phage(gi356870632)3.65e-12Showinfo_outline
324255223..4255555hypothetical protein; FAR04_208050.0Showinfo_outline
334256419..4256643PHAGE_Phage_Gifsy_2_NC_010393: hypothetical bacteriophage protein; FAR04_20810; phage(gi169257285)1.78e-13Showinfo_outline
344256717..4257316PHAGE_Entero_mEp237_NC_019704: hypothetical protein; FAR04_20815; phage(gi435439315)4.88e-119Showinfo_outline
354257316..4257522PHAGE_Entero_mEp237_NC_019704: hypothetical protein; FAR04_20820; phage(gi435439316)3.14e-27Showinfo_outline
364257525..4258106PHAGE_Entero_mEp213_NC_019720: NinG protein; FAR04_20825; phage(gi428782653)3.34e-56Showinfo_outline
374258103..4258243PHAGE_Entero_mEp237_NC_019704: hypothetical protein; FAR04_20830; phage(gi435439319)1.29e-06Showinfo_outline
384258240..4259061PHAGE_Entero_mEp237_NC_019704: late gene regulator Q; FAR04_20835; phage(gi435439320)2.13e-144Showinfo_outline
394259451..4259675hypothetical protein; FAR04_208400.0Showinfo_outline
404259819..4260118PHAGE_Salmon_ST64T_NC_004348: holin protein; FAR04_20845; phage(gi24371577)1.02e-45Showinfo_outline
414260115..4260654PHAGE_Erwini_vB_EamP_S6_NC_019514: endolysin; FAR04_20850; phage(gi422935930)1.85e-82Showinfo_outline
424260651..4260995PHAGE_Pseudo_vB_Pae_Kakheti25_NC_017864: holin; FAR04_20855; phage(gi388542661)1.10e-09Showinfo_outline
434260992..4261267PHAGE_Entero_mEp390_NC_019721: hypothetical protein; FAR04_20860; phage(gi428782715)5.07e-35Showinfo_outline
444261218..4261412PHAGE_Escher_HK639_NC_016158: hypothetical protein; FAR04_20865; phage(gi356870671)1.35e-19Showinfo_outline
454262356..4263351PHAGE_Burkho_BcepMigl_NC_019917: terminase small subunit; FAR04_20870; phage(gi431809885)5.26e-55Showinfo_outline
464263335..4264648PHAGE_Pseudo_YMC11/02/R656_NC_028657: hypothetical protein; FAR04_20875; phage(gi966197881)0.0Showinfo_outline
474264650..4266050PHAGE_Paraco_vB_PmaS_IMEP1_NC_026608: portal protein; FAR04_20880; phage(gi764162030)4.58e-82Showinfo_outline
484266034..4267146PHAGE_Pseudo_PS_1_NC_029066: head morphogenesis protein; FAR04_20885; phage(gi985757697)1.44e-112Showinfo_outline
494267659..4268438PHAGE_Xantho_Xp15_NC_007024: putative phage structural protein; FAR04_20890; phage(gi66392059)5.43e-19Showinfo_outline
504268449..4269402PHAGE_Vibrio_pYD38_B_NC_021561: major capsid protein; FAR04_20895; phage(gi514231589)6.45e-148Showinfo_outline
514269411..4269683hypothetical protein; FAR04_209000.0Showinfo_outline
524269724..4270119PHAGE_Pseudo_PS_1_NC_029066: hypothetical protein; FAR04_20905; phage(gi985757703)1.30e-19Showinfo_outline
534270121..4270375PHAGE_Salmon_SSU5_NC_018843: hypothetical protein; FAR04_20910; phage(gi410491538)4.03e-28Showinfo_outline
544270385..4270618hypothetical protein; FAR04_209150.0Showinfo_outline
554270605..4270988PHAGE_Pseudo_YMC11/02/R656_NC_028657: hypothetical protein; FAR04_20920; phage(gi966197873)3.94e-28Showinfo_outline
564270990..4271541PHAGE_Escher_HK639_NC_016158: hypothetical protein; FAR04_20925; phage(gi356870610)1.67e-36Showinfo_outline
574271538..4271930PHAGE_Acinet_Bphi_B1251_NC_019541: hypothetical protein; FAR04_20930; phage(gi423262013)2.16e-19Showinfo_outline
584271954..4273126PHAGE_Vibrio_VpKK5_NC_026610: tail subunit; FAR04_20935; phage(gi764162154)2.59e-13Showinfo_outline
594273181..4273663PHAGE_Pseudo_phiPSA1_NC_024365: hypothetical protein; FAR04_20940; phage(gi658307708)1.88e-11Showinfo_outline
604273801..4273998hypothetical protein; FAR04_209450.0Showinfo_outline
614274066..4274464PHAGE_Salmon_SEN5_NC_028701: hypothetical protein; FAR04_20950; phage(gi966201587)7.86e-09Showinfo_outline
624275044..4277959PHAGE_Pseudo_MP29_NC_011613: putative tail component protein; FAR04_20955; phage(gi215480016)9.91e-66Showinfo_outline
634277959..4278432PHAGE_Pseudo_PAJU2_NC_011373: hypothetical protein; FAR04_20960; phage(gi209552438)1.05e-46Showinfo_outline
644278419..4278901PHAGE_Pseudo_D3_NC_002484: hypothetical protein; FAR04_20965; phage(gi9635614)9.26e-37Showinfo_outline
654278911..4279291PHAGE_Pseudo_YMC11/07/P54_PAE_BP_NC_030909: hypothetical protein; FAR04_20970; phage(gi100020)3.26e-22Showinfo_outline
664279288..4282356PHAGE_Pseudo_PS_1_NC_029066: tail protein; FAR04_20975; phage(gi985757719)7.39e-77Showinfo_outline
674282578..4282763hypothetical protein; FAR04_209800.0Showinfo_outline
684283086..4283403hypothetical protein; FAR04_209850.0Showinfo_outline
69complement(4283444..4284568)ABC-2 transporter permease; FAR04_209900.0Showinfo_outline
70complement(4284568..4287312)PHAGE_Plankt_PaV_LD_NC_016564: ABC transporter; FAR04_20995; phage(gi371496158)1.03e-15Showinfo_outline
714287413..4287427attR0.0Showinfo_outline

Region 4, total 14 CDS

#CDS PositionBLAST HitE-ValueSequence
14425554..4425565attL0.0Showinfo_outline
2complement(4427212..4428630)PHAGE_Salmon_9NA_NC_025443: putative tail tape measure protein; FAR04_21725; phage(gi712914006)1.94e-20Showinfo_outline
3complement(4429838..4430632)hypothetical protein; FAR04_217300.0Showinfo_outline
4complement(4431207..4432970)PHAGE_Entero_P4_NC_001609: DNA primase; FAR04_21735; phage(gi9627512)4.88e-126Showinfo_outline
5complement(4432967..4433281)DUF4222 domain-containing protein; FAR04_217400.0Showinfo_outline
6complement(4433292..4433495)PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; FAR04_21745; phage(gi966201472)1.20e-17Showinfo_outline
7complement(4433492..4433707)hypothetical protein; FAR04_217500.0Showinfo_outline
8complement(4433704..4434579)integrase; FAR04_217550.0Showinfo_outline
9complement(4434572..4434817)host cell division inhibitor Icd-like protein; FAR04_217600.0Showinfo_outline
10complement(4434796..4435188)PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; FAR04_21765; phage(gi100057)6.69e-19Showinfo_outline
11complement(4435289..4435486)PHAGE_Entero_P4_NC_001609: transcriptional regulator; FAR04_21770; phage(gi9627517)7.35e-08Showinfo_outline
12complement(4435654..4436250)hypothetical protein; FAR04_217750.0Showinfo_outline
13complement(4436319..4437533)PROPHAGE_Escher_CFT073: putative prophage integrase; FAR04_21780; phage(gi26250313)0.0Showinfo_outline
144437566..4437577attR0.0Showinfo_outline

Region 5, total 56 CDS

#CDS PositionBLAST HitE-ValueSequence
1complement(4837583..4838512)PHAGE_Burkho_phi1026b_NC_005284: gp58; FAR04_23795; phage(gi38707948)5.22e-06Showinfo_outline
24838605..4839192alanyl-tRNA editing protein; FAR04_238000.0Showinfo_outline
3complement(4839398..4842475)PHAGE_Pseudo_PS_1_NC_029066: tail protein; FAR04_23805; phage(gi985757719)2.03e-75Showinfo_outline
4complement(4842472..4842852)PHAGE_Pseudo_YMC11/07/P54_PAE_BP_NC_030909: hypothetical protein; FAR04_23810; phage(gi100020)2.48e-23Showinfo_outline
5complement(4842865..4843341)PHAGE_Pseudo_PS_1_NC_029066: hypothetical protein; FAR04_23815; phage(gi985757717)4.93e-37Showinfo_outline
6complement(4843328..4843801)PHAGE_Pseudo_PAJU2_NC_011373: hypothetical protein; FAR04_23820; phage(gi209552438)4.95e-46Showinfo_outline
74843596..4843607attL0.0Showinfo_outline
8complement(4843823..4847209)PHAGE_Entero_BP_4795_NC_004813: putative tail component; FAR04_23825; phage(gi157166052)0.0Showinfo_outline
9complement(4847270..4847503)PHAGE_Entero_HK022_NC_002166: gp20; FAR04_23830; phage(gi9634138)3.87e-15Showinfo_outline
10complement(4847577..4847882)PHAGE_Entero_HK106_NC_019768: tail protein; FAR04_23835; phage(gi428783291)7.49e-38Showinfo_outline
11complement(4847885..4848289)PHAGE_Entero_HK446_NC_019714: tail assembly chaperone; FAR04_23840; phage(gi428782205)9.71e-46Showinfo_outline
12complement(4848320..4849024)PHAGE_Entero_mEp234_NC_019715: major tail subunit; FAR04_23845; phage(gi428782264)8.96e-110Showinfo_outline
13complement(4849081..4849428)PHAGE_Entero_mEp390_NC_019721: hypothetical protein; FAR04_23850; phage(gi428782673)2.48e-43Showinfo_outline
14complement(4849425..4849874)PHAGE_Entero_HK97_NC_002167: Gp10; FAR04_23855; phage(gi9634169)8.79e-89Showinfo_outline
15complement(4849871..4850209)PHAGE_Entero_mEp234_NC_019715: head-tail connector II; FAR04_23860; phage(gi428782261)1.33e-49Showinfo_outline
16complement(4850218..4850535)PHAGE_Shigel_SfII_NC_021857: head-tail connector protein; FAR04_23865; phage(gi526244642)1.11e-25Showinfo_outline
17complement(4850613..4851851)PHAGE_Entero_SfV_NC_003444: capsid; FAR04_23870; phage(gi19548995)0.0Showinfo_outline
18complement(4851861..4852460)PHAGE_Entero_SfV_NC_003444: capsid protease; FAR04_23875; phage(gi19548994)1.57e-119Showinfo_outline
19complement(4852453..4853679)PHAGE_Entero_SfV_NC_003444: portal protein; FAR04_23880; phage(gi19548993)0.0Showinfo_outline
20complement(4853827..4855578)PHAGE_Entero_mEp235_NC_019708: terminase large subunit; FAR04_23885; phage(gi428781812)0.0Showinfo_outline
21complement(4855582..4856079)PHAGE_Entero_mEp235_NC_019708: terminase small subunit; FAR04_23890; phage(gi428781811)4.92e-83Showinfo_outline
22complement(4856238..4856588)PHAGE_Entero_mEp235_NC_019708: putative HNH endonuclease; FAR04_23895; phage(gi428781871)1.22e-65Showinfo_outline
234856661..4857116hypothetical protein; FAR04_239000.0Showinfo_outline
24complement(4857152..4857277)PHAGE_Entero_SfI_NC_027339: Rz protein; FAR04_23905; phage(gi849250282)2.54e-11Showinfo_outline
25complement(4857315..4857503)PHAGE_Acinet_Bphi_B1251_NC_019541: hypothetical protein; FAR04_23910; phage(gi423262005)2.75e-28Showinfo_outline
26complement(4857616..4857813)PHAGE_Entero_mEp390_NC_019721: hypothetical protein; FAR04_23915; phage(gi428782716)2.84e-19Showinfo_outline
27complement(4857764..4858039)PHAGE_Entero_mEp390_NC_019721: hypothetical protein; FAR04_23920; phage(gi428782715)8.16e-41Showinfo_outline
28complement(4858042..4858671)PHAGE_Entero_mEp390_NC_019721: lysin; FAR04_23925; phage(gi428782714)4.55e-110Showinfo_outline
29complement(4858671..4858952)PHAGE_Entero_mEp390_NC_019721: putative holin; FAR04_23930; phage(gi428782713)2.19e-26Showinfo_outline
30complement(4858939..4859325)PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; FAR04_23935; phage(gi100130)6.20e-77Showinfo_outline
31complement(4859565..4860170)hypothetical protein; FAR04_239400.0Showinfo_outline
32complement(4860277..4860855)DUF1133 family protein; FAR04_239450.0Showinfo_outline
33complement(4860869..4861849)PHAGE_Entero_mEp460_NC_019716: hypothetical protein; FAR04_23950; phage(gi428782365)9.93e-169Showinfo_outline
34complement(4861862..4862239)PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; FAR04_23955; phage(gi100062)2.27e-64Showinfo_outline
35complement(4862249..4863058)PHAGE_Salmon_118970_sal3_NC_031940: prohead core protein protease; FAR04_23960; phage(gi100061)7.30e-140Showinfo_outline
36complement(4863055..4863969)PHAGE_Entero_mEp390_NC_019721: hypothetical protein; FAR04_23965; phage(gi428782706)1.06e-33Showinfo_outline
37complement(4863926..4864138)PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; FAR04_23970; phage(gi100119)6.69e-13Showinfo_outline
38complement(4864132..4864314)PHAGE_Shigel_SfII_NC_021857: hypothetical protein; FAR04_23975; phage(gi526244674)5.28e-20Showinfo_outline
39complement(4864376..4864837)PHAGE_Entero_mEp390_NC_019721: hypothetical protein; FAR04_23980; phage(gi428782704)4.27e-96Showinfo_outline
40complement(4864863..4865060)PHAGE_Entero_mEp390_NC_019721: prophage anti-repressor; FAR04_23985; phage(gi428782702)1.47e-16Showinfo_outline
414865165..4865812PHAGE_Entero_mEp390_NC_019721: prophage repressor; FAR04_23990; phage(gi428782701)3.26e-69Showinfo_outline
424866041..4866280PHAGE_Entero_mEp390_NC_019721: hypothetical protein; FAR04_23995; phage(gi428782700)5.24e-32Showinfo_outline
434866659..4866958PHAGE_Entero_mEp390_NC_019721: hypothetical protein; FAR04_24000; phage(gi428782699)1.07e-17Showinfo_outline
444866958..4867743PHAGE_Burkho_phi6442_NC_009235: gp57; FAR04_24005; phage(gi134288621)3.41e-83Showinfo_outline
454867743..4868819PHAGE_Salmon_SPN1S_NC_016761: putative bacteriophage protein; FAR04_24010; phage(gi374531224)3.93e-180Showinfo_outline
464869061..4869411PHAGE_Entero_mEp460_NC_019716: hypothetical protein; FAR04_24015; phage(gi428782345)5.84e-63Showinfo_outline
474869411..4869623PHAGE_Vibrio_pYD38_A_NC_021534: hypothetical protein; FAR04_24020; phage(gi514051013)1.15e-45Showinfo_outline
484869623..4870270PHAGE_Entero_UAB_Phi20_NC_031019: hypothetical protein; FAR04_24025; phage(gi100055)1.76e-56Showinfo_outline
494870278..4870463PHAGE_Stx2_vB_EcoP_24B_NC_027984: excisionase; FAR04_24030; phage(gi937456233)2.57e-21Showinfo_outline
50complement(4870479..4871417)PHAGE_Salmon_SSU5_NC_018843: hypothetical protein; FAR04_24035; phage(gi410491447)2.99e-10Showinfo_outline
514871257..4871268attR0.0Showinfo_outline
52complement(4871450..4872619)PHAGE_Stx2_c_86_NC_008464: integrase; FAR04_24040; phage(gi116222028)0.0Showinfo_outline
534872815..4872889tRNA0.0Showinfo_outline
544873138..4873620cupin fold metalloprotein, WbuC family; FAR04_240500.0Showinfo_outline
554873987..4874868hypothetical protein; FAR04_240550.0Showinfo_outline
56complement(4874878..4875786)PHAGE_Burkho_phi1026b_NC_005284: gp58; FAR04_24060; phage(gi38707948)5.61e-07Showinfo_outline

Region 6, total 68 CDS

#CDS PositionBLAST HitE-ValueSequence
15234755..5235234PHAGE_Bacill_phiAGATE_NC_020081: putative dihydrofolate reductase; FAR04_25970; phage(gi448260875)3.28e-39Showinfo_outline
2complement(5235321..5235502)hypothetical protein; FAR04_259750.0Showinfo_outline
3complement(5236291..5236701)PHAGE_Klebsi_PKP126_NC_031053: hypothetical protein; FAR04_25980; phage(gi100059)1.06e-06Showinfo_outline
4complement(5236758..5236955)hypothetical protein; FAR04_259850.0Showinfo_outline
5complement(5236955..5237821)PHAGE_Salmon_SEN34_NC_028699: tail fiber protein; FAR04_25990; phage(gi966201444)1.61e-26Showinfo_outline
6complement(5237821..5238594)PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; FAR04_25995; phage(gi966201443)9.20e-91Showinfo_outline
7complement(5238591..5239787)PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; FAR04_26000; phage(gi966201442)0.0Showinfo_outline
8complement(5239787..5240140)PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; FAR04_26005; phage(gi966201441)1.47e-57Showinfo_outline
9complement(5240137..5240793)PHAGE_Salmon_SEN34_NC_028699: baseplate assembly protein; FAR04_26010; phage(gi966201439)1.26e-109Showinfo_outline
10complement(5241122..5241847)hypothetical protein; FAR04_260150.0Showinfo_outline
11complement(5241852..5242919)PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; FAR04_26020; phage(gi966201436)0.0Showinfo_outline
12complement(5242922..5243224)PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; FAR04_26025; phage(gi966201435)9.67e-34Showinfo_outline
13complement(5243225..5243800)PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; FAR04_26030; phage(gi966201434)1.20e-92Showinfo_outline
14complement(5243800..5245797)PHAGE_Salmon_SEN34_NC_028699: tail tape measure protein; FAR04_26035; phage(gi966201433)0.0Showinfo_outline
15complement(5245787..5245939)NTP pyrophosphohydrolase; FAR04_260400.0Showinfo_outline
16complement(5245981..5246400)PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; FAR04_26045; phage(gi966201432)4.09e-48Showinfo_outline
17complement(5246404..5246847)PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; FAR04_26050; phage(gi966201431)1.41e-83Showinfo_outline
18complement(5246857..5248002)PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; FAR04_26055; phage(gi966201430)4.66e-179Showinfo_outline
19complement(5248006..5248446)PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; FAR04_26060; phage(gi966201429)1.29e-41Showinfo_outline
20complement(5248541..5248927)PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; FAR04_26065; phage(gi966201428)8.98e-59Showinfo_outline
21complement(5248927..5249541)PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; FAR04_26070; phage(gi966201427)2.70e-23Showinfo_outline
22complement(5249538..5249957)PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; FAR04_26075; phage(gi966201426)2.15e-54Showinfo_outline
23complement(5249926..5250207)PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; FAR04_26080; phage(gi966201425)1.33e-09Showinfo_outline
24complement(5250247..5251188)PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; FAR04_26085; phage(gi966201424)6.02e-167Showinfo_outline
25complement(5251200..5251694)PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; FAR04_26090; phage(gi966201423)1.50e-54Showinfo_outline
26complement(5251698..5252900)PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; FAR04_26095; phage(gi966201422)6.42e-134Showinfo_outline
27complement(5252910..5253104)hypothetical protein; FAR04_261000.0Showinfo_outline
28complement(5253150..5253698)PHAGE_Salmon_SEN34_NC_028699: putative head morphogenesis protein; FAR04_26105; phage(gi966201421)5.90e-65Showinfo_outline
29complement(5253754..5255205)PHAGE_Salmon_SEN34_NC_028699: putative portal protein; FAR04_26110; phage(gi966201420)0.0Showinfo_outline
30complement(5255443..5256843)PHAGE_Edward_GF_2_NC_026611: putative terminase large subunit; FAR04_26115; phage(gi764162249)0.0Showinfo_outline
31complement(5256794..5257570)PHAGE_Entero_933W_NC_000924: putative small subunit terminase; FAR04_26120; phage(gi9632516)6.08e-18Showinfo_outline
325257667..5258317PHAGE_Salmon_SEN34_NC_028699: terminase small subunit; FAR04_26125; phage(gi966201418)1.02e-104Showinfo_outline
335258314..5259882PHAGE_Escher_HK639_NC_016158: terminase large subunit; FAR04_26130; phage(gi356870602)0.0Showinfo_outline
345259894..5261342PHAGE_Mannhe_vB_MhS_535AP2_NC_028853: portal protein; FAR04_26135; phage(gi971749589)4.44e-143Showinfo_outline
355261260..5262273PHAGE_Cronob_ENT47670_NC_019927: phage head morphogenesis; FAR04_26140; phage(gi431810507)1.44e-152Showinfo_outline
36complement(5262270..5262473)hypothetical protein; FAR04_261450.0Showinfo_outline
375262524..5263879PHAGE_Cronob_ENT47670_NC_019927: hypothetical protein; FAR04_26150; phage(gi431810499)6.79e-163Showinfo_outline
385263879..5264340PHAGE_Salmon_II_E1_NC_010495: putative capsid decoration protein; FAR04_26155; phage(gi170676292)1.38e-39Showinfo_outline
395264337..5265392PHAGE_Salmon_II_E1_NC_010495: putative coat protein; FAR04_26160; phage(gi170676293)1.10e-126Showinfo_outline
405265425..5265664hypothetical protein; FAR04_261650.0Showinfo_outline
415265667..5266047PHAGE_Cronob_ENT47670_NC_019927: hypothetical protein; FAR04_26170; phage(gi431810531)1.58e-39Showinfo_outline
425266047..5266220PHAGE_Entero_ES18_NC_006949: gp12; FAR04_26175; phage(gi62362225)1.20e-17Showinfo_outline
435266220..5266582PHAGE_Mannhe_vB_MhS_535AP2_NC_028853: hypothetical protein; FAR04_26180; phage(gi971749596)6.06e-28Showinfo_outline
445266585..5266953PHAGE_Cronob_ENT47670_NC_019927: hypothetical protein; FAR04_26185; phage(gi431810532)2.66e-67Showinfo_outline
455266950..5267333PHAGE_Cronob_ENT47670_NC_019927: hypothetical protein; FAR04_26190; phage(gi431810530)1.96e-39Showinfo_outline
465267392..5267880PHAGE_Cronob_ENT47670_NC_019927: major tail subunit; FAR04_26195; phage(gi431810520)3.14e-41Showinfo_outline
475268224..5268919PHAGE_Cronob_ENT47670_NC_019927: hypothetical protein; FAR04_26200; phage(gi431810508)5.03e-82Showinfo_outline
48complement(5269112..5269915)PHAGE_Entero_Sf101_NC_027398: repressor cI; FAR04_26205; phage(gi849122301)9.30e-26Showinfo_outline
495270169..5270882PHAGE_Salmon_SPN3UB_NC_019545: hypothetical protein; FAR04_26210; phage(gi423262398)4.27e-50Showinfo_outline
505270952..5271704PHAGE_Escher_PA2_NC_028449: antirepressor protein; FAR04_26215; phage(gi953358051)1.57e-57Showinfo_outline
515271859..5272218PHAGE_Salmon_SPN3UB_NC_019545: hypothetical protein; FAR04_26220; phage(gi423262401)3.75e-45Showinfo_outline
525272298..5272510PHAGE_Salmon_SPN3UB_NC_019545: hypothetical protein; FAR04_26225; phage(gi423262402)7.38e-21Showinfo_outline
535272585..5273613hypothetical protein; FAR04_262300.0Showinfo_outline
545273679..5277095PHAGE_Vibrio_pYD38_A_NC_021534: tail length tape measure protein; FAR04_26235; phage(gi514051037)0.0Showinfo_outline
555277136..5277315Rrf2 family transcriptional regulator; FAR04_262400.0Showinfo_outline
56complement(5277292..5277558)DUF1883 domain-containing protein; FAR04_262450.0Showinfo_outline
575277729..5278148PHAGE_Cronob_ENT47670_NC_019927: hypothetical protein; FAR04_26250; phage(gi431810519)5.53e-43Showinfo_outline
585278148..5278618PHAGE_Vibrio_pYD38_A_NC_021534: hypothetical protein; FAR04_26255; phage(gi514051035)1.35e-38Showinfo_outline
595278615..5278916PHAGE_Salmon_II_E1_NC_010495: possible tail assembly protein; FAR04_26260; phage(gi170676313)7.93e-26Showinfo_outline
605279152..5279424hypothetical protein; FAR04_262650.0Showinfo_outline
615279462..5280364DUF1281 domain-containing protein; FAR04_262700.0Showinfo_outline
625280368..5280672hypothetical protein; FAR04_262750.0Showinfo_outline
635280749..5281432PHAGE_Staphy_Stau2_NC_030933: hypothetical protein; FAR04_26280; phage(gi100063)5.82e-29Showinfo_outline
645281433..5281654PHAGE_Entero_N15_NC_001901: gp50; FAR04_26285; phage(gi9630517)3.45e-05Showinfo_outline
655281668..5282102DUF1380 domain-containing protein; FAR04_262900.0Showinfo_outline
665282153..5282917hypothetical protein; FAR04_262950.0Showinfo_outline
675282802..5283373DUF1472 domain-containing protein; FAR04_263000.0Showinfo_outline
685283346..5283771PHAGE_Pseudo_YuA_NC_010116: hypothetical protein; FAR04_26305; phage(gi162135127)7.66e-17Showinfo_outline

Region 7, total 43 CDS

#CDS PositionBLAST HitE-ValueSequence
15290604..5290616attL0.0Showinfo_outline
25290953..5291711PROPHAGE_Escher_CFT073: putative prophage integrase; FAR04_26375; phage(gi26250313)7.92e-122Showinfo_outline
35291869..5292879LacI family DNA-binding transcriptional regulator; FAR04_263800.0Showinfo_outline
45292975..5295101alpha-galactosidase; FAR04_263850.0Showinfo_outline
55295164..5296441MFS transporter; FAR04_263900.0Showinfo_outline
65296441..5297871PHAGE_Bacill_SP_10_NC_019487: levanase; FAR04_26395; phage(gi418489513)1.56e-30Showinfo_outline
75298066..5299460porin; FAR04_264000.0Showinfo_outline
8complement(5299706..5299810)thiosulfate reductase cytochrome B subunit; FAR04_264050.0Showinfo_outline
95300004..5300079tRNA0.0Showinfo_outline
105300147..5300404PHAGE_Salmon_ST64B_NC_004313: hypothetical protein; FAR04_26415; phage(gi23505494)3.19e-34Showinfo_outline
11complement(5300310..5300756)PHAGE_Shigel_SfIV_NC_022749: hypothetical protein; FAR04_26420; phage(gi557307562)1.49e-07Showinfo_outline
125301086..5301202terminase small subunit; FAR04_264250.0Showinfo_outline
135301319..5301714PHAGE_Entero_mEp390_NC_019721: putative holin; FAR04_26430; phage(gi428782712)1.26e-84Showinfo_outline
145301701..5301982PHAGE_Entero_mEp390_NC_019721: putative holin; FAR04_26435; phage(gi428782713)4.03e-50Showinfo_outline
155301982..5302611PHAGE_Escher_HK639_NC_016158: endochitinase; FAR04_26440; phage(gi356870669)8.22e-137Showinfo_outline
165302619..5302894PHAGE_Entero_mEp390_NC_019721: hypothetical protein; FAR04_26445; phage(gi428782715)1.38e-42Showinfo_outline
175302845..5303036PHAGE_Entero_mEp390_NC_019721: hypothetical protein; FAR04_26450; phage(gi428782716)3.40e-18Showinfo_outline
185303068..5303268PHAGE_Entero_mEp390_NC_019721: hypothetical protein; FAR04_26455; phage(gi428782717)1.65e-23Showinfo_outline
195303333..5303578PHAGE_Salmon_SPN9CC_NC_017985: hypothetical protein; FAR04_26460; phage(gi389060534)3.22e-10Showinfo_outline
205303650..5303856DUF551 domain-containing protein; FAR04_264650.0Showinfo_outline
215303928..5304218PHAGE_Rhizob_16_3_NC_011103: holin; FAR04_26470; phage(gi195546640)7.39e-25Showinfo_outline
225304231..5304440PHAGE_Escher_HK75_NC_016160: hypothetical protein; FAR04_26475; phage(gi356870735)1.00e-11Showinfo_outline
235304562..5304996PHAGE_Pseudo_PAJU2_NC_011373: hypothetical protein; FAR04_26480; phage(gi209552420)7.67e-34Showinfo_outline
245305006..5306538PHAGE_Pseudo_PAJU2_NC_011373: putative terminase; FAR04_26485; phage(gi209552421)0.0Showinfo_outline
255306541..5307818PHAGE_Entero_HK022_NC_002166: head portal protein; FAR04_26490; phage(gi9634122)0.0Showinfo_outline
265307824..5308504PHAGE_Escher_HK75_NC_016160: prohead protease; FAR04_26495; phage(gi356870681)1.08e-111Showinfo_outline
275308516..5309679PHAGE_Entero_HK022_NC_002166: major capsid subunit precursor; FAR04_26500; phage(gi9634124)0.0Showinfo_outline
285309716..5309958hypothetical protein; FAR04_265050.0Showinfo_outline
295309906..5310232PHAGE_Entero_mEp235_NC_019708: head-tail connector II; FAR04_26510; phage(gi428781817)7.58e-14Showinfo_outline
305310293..5310490PHAGE_Entero_HK022_NC_002166: gp8; FAR04_26515; phage(gi9634127)1.16e-31Showinfo_outline
315310492..5310824PHAGE_Entero_HK022_NC_002166: gp9; FAR04_26520; phage(gi9634128)1.21e-68Showinfo_outline
325310817..5311356PHAGE_Entero_HK022_NC_002166: gp10; FAR04_26525; phage(gi9634129)2.66e-103Showinfo_outline
335311353..5311718PHAGE_Entero_HK022_NC_002166: gp11; FAR04_26530; phage(gi9634130)2.39e-62Showinfo_outline
345311775..5312266PHAGE_Entero_HK022_NC_002166: major tail subunit; FAR04_26535; phage(gi9634131)1.31e-80Showinfo_outline
355312310..5312693PHAGE_Entero_HK022_NC_002166: lambda gpG analog; FAR04_26540; phage(gi9634132)1.87e-51Showinfo_outline
365312696..5312959PHAGE_Entero_HK022_NC_002166: lambda gpT analog; FAR04_26545; phage(gi9634133)1.04e-29Showinfo_outline
375313023..5313400outer membrane protein assembly factor BamE; FAR04_265500.0Showinfo_outline
385313462..5316008PHAGE_Entero_HK022_NC_002166: tail length tape measure protein; FAR04_26555; phage(gi9634134)1.47e-169Showinfo_outline
395316008..5316487PHAGE_Pseudo_PMG1_NC_016765: hypothetical protein; FAR04_26560; phage(gi374531665)3.03e-45Showinfo_outline
405316474..5316956PHAGE_Pseudo_D3_NC_002484: hypothetical protein; FAR04_26565; phage(gi9635614)1.76e-36Showinfo_outline
415316966..5317346PHAGE_Pseudo_YMC11/07/P54_PAE_BP_NC_030909: hypothetical protein; FAR04_26570; phage(gi100020)1.99e-21Showinfo_outline
425317343..5320402PHAGE_Pseudo_PS_1_NC_029066: tail protein; FAR04_26575; phage(gi985757719)1.36e-78Showinfo_outline
435325164..5325176attR0.0Showinfo_outline

Region 8, total 39 CDS

#CDS PositionBLAST HitE-ValueSequence
15367764..5367776attL0.0Showinfo_outline
2complement(5381926..5382423)PHAGE_Bacill_Bp8p_C_NC_029121: putative dihydrofolate reductase; FAR04_26940; phage(gi985761486)1.16e-33Showinfo_outline
35382568..5383581PHAGE_Mycoba_Butters_NC_021061: integrase; FAR04_26945; phage(gi479336499)2.26e-12Showinfo_outline
45383526..5383783hypothetical protein; FAR04_269500.0Showinfo_outline
55383784..5384134DUF3330 domain-containing protein; FAR04_269550.0Showinfo_outline
65384260..5384820PHAGE_Salmon_SJ46_NC_031129: prohead core protein protease; FAR04_26960; phage(gi100061)7.62e-69Showinfo_outline
75384823..5387789PROPHAGE_Xantho_33913: Tn5041 transposase; FAR04_26965; phage(gi21231545)8.67e-46Showinfo_outline
85387856..5388233GNAT family N-acetyltransferase; FAR04_269700.0Showinfo_outline
9complement(5388434..5388703)PHAGE_Stx2_vB_EcoP_24B_NC_027984: Cat; FAR04_26975; phage(gi937456276)1.38e-61Showinfo_outline
105388743..5388785attL0.0Showinfo_outline
11complement(5388786..5388907)PHAGE_Entero_VT2_Sakai_NC_000902: hypothetical protein; FAR04_26980; phage(gi9633474)5.98e-08Showinfo_outline
12complement(5388904..5389356)PHAGE_Vibrio_pYD38_A_NC_021534: hypothetical protein; FAR04_26985; phage(gi514051016)3.11e-19Showinfo_outline
13complement(5389593..5389886)PHAGE_Entero_933W_NC_000924: Ren protein; FAR04_26990; phage(gi9632496)4.76e-37Showinfo_outline
14complement(5389883..5390731)PHAGE_Entero_mEpX1_NC_019709: putative replication protein DnaC; FAR04_26995; phage(gi428781919)5.96e-118Showinfo_outline
15complement(5390728..5391603)PHAGE_Entero_mEpX1_NC_019709: DNA replication protein O; FAR04_27000; phage(gi428781918)1.80e-84Showinfo_outline
16complement(5391690..5392010)PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage transcriptional activator; Lambda gpCII analog; FAR04_27005; phage(gi169257278)1.50e-50Showinfo_outline
17complement(5392050..5392271)PHAGE_Entero_Sf101_NC_027398: Cro; FAR04_27010; phage(gi849122302)2.34e-20Showinfo_outline
185392374..5393069PHAGE_Entero_HK225_NC_019717: prophage repressor; FAR04_27015; phage(gi428782422)4.56e-98Showinfo_outline
195393089..5393523hypothetical protein; FAR04_270200.0Showinfo_outline
205394175..5394369hypothetical protein; FAR04_270250.0Showinfo_outline
215394458..5394742PHAGE_Escher_HK639_NC_016158: hypothetical protein; FAR04_27030; phage(gi356870640)1.12e-51Showinfo_outline
225394758..5395603PHAGE_Ralsto_RSK1_NC_022915: putative phage recombination protein; FAR04_27035; phage(gi560186064)9.50e-80Showinfo_outline
235395600..5396220PHAGE_Pseudo_PMG1_NC_016765: hypothetical protein; FAR04_27040; phage(gi374531724)2.51e-30Showinfo_outline
245396213..5396899PHAGE_Salmon_SEN34_NC_028699: exonuclease; FAR04_27045; phage(gi966201454)1.37e-145Showinfo_outline
255396896..5397054PHAGE_Entero_VT2_Sakai_NC_000902: hypothetical protein; FAR04_27050; phage(gi9633408)1.63e-15Showinfo_outline
265397051..5397578PHAGE_Entero_VT2_Sakai_NC_000902: similar to DNA methylase; FAR04_27055; phage(gi9633428)9.56e-73Showinfo_outline
275397575..5398345PHAGE_Escher_vB_EcoM_ECO1230_10_NC_027995: conserved phage protein; FAR04_27060; phage(gi937533322)7.59e-81Showinfo_outline
285398342..5398565hypothetical protein; FAR04_270650.0Showinfo_outline
295398562..5399326PHAGE_Entero_P1_NC_005856: PmgT; FAR04_27070; phage(gi46401715)3.70e-86Showinfo_outline
305399323..5399514PHAGE_Entero_VT2_Sakai_NC_000902: hypothetical protein; FAR04_27075; phage(gi9633407)2.27e-19Showinfo_outline
315399511..5399720hypothetical protein; FAR04_270800.0Showinfo_outline
325399717..5399935PHAGE_Entero_VT2_Sakai_NC_000902: DksA-like zinc finger domain containing protein; FAR04_27085; phage(gi52473540)8.78e-16Showinfo_outline
335399939..5400184PHAGE_Entero_VT2_Sakai_NC_000902: excisionase; FAR04_27090; phage(gi9633398)2.74e-25Showinfo_outline
345400227..5400736PROPHAGE_Escher_Sakai: putative integrase; FAR04_27095; phage(gi15832267)7.50e-88Showinfo_outline
355400855..5400897attR0.0Showinfo_outline
365400876..5401573PHAGE_Entero_P1_NC_005856: InsA; FAR04_27100; phage(gi46401643)4.16e-58Showinfo_outline
37complement(5401541..5403832)PHAGE_Salmon_SJ46_NC_031129: hypothetical protein; FAR04_27105; phage(gi100060)1.37e-133Showinfo_outline
385403927..5404532PHAGE_Clostr_vB_CpeS_CP51_NC_021325: putative resolvase; FAR04_27110; phage(gi509140089)1.47e-21Showinfo_outline
395406563..5406575attR0.0Showinfo_outline

Region 9, total 19 CDS

#CDS PositionBLAST HitE-ValueSequence
15408478..5411444PROPHAGE_Xantho_33913: Tn5041 transposase; FAR04_27145; phage(gi21231545)3.02e-45Showinfo_outline
25411523..5412527PROPHAGE_Shewan_MR-1: IS110 family transposase; FAR04_27150; phage(gi24375433)1.70e-59Showinfo_outline
3complement(5412563..5412623)PHAGE_Shigel_SfIV_NC_022749: IS1 transposase B; FAR04_27155; phage(gi557307573)3.60e-05Showinfo_outline
4complement(5412624..5413312)PHAGE_Entero_VT2_Sakai_NC_000902: bet; FAR04_27160; phage(gi9633410)5.62e-86Showinfo_outline
5complement(5413329..5413613)PHAGE_Escher_HK639_NC_016158: hypothetical protein; FAR04_27165; phage(gi356870640)1.91e-53Showinfo_outline
6complement(5413621..5414592)PHAGE_Entero_c_1_NC_019706: hypothetical protein; FAR04_27170; phage(gi428781776)3.31e-69Showinfo_outline
7complement(5414673..5414879)PHAGE_Escher_P13374_NC_018846: host killing protein; FAR04_27175; phage(gi410491620)1.35e-08Showinfo_outline
85415316..5415519PHAGE_Salmon_118970_sal4_NC_030919: hypothetical protein; FAR04_27180; phage(gi100018)5.08e-27Showinfo_outline
9complement(5415885..5416250)hypothetical protein; FAR04_271850.0Showinfo_outline
10complement(5416512..5416631)hypothetical protein; FAR04_271900.0Showinfo_outline
11complement(5416692..5417351)PHAGE_Entero_HK140_NC_019710: prophage repressor; FAR04_27195; phage(gi428781988)8.26e-96Showinfo_outline
125417460..5417678PHAGE_Salmon_g341c_NC_013059: Cro; FAR04_27200; phage(gi255252725)3.24e-19Showinfo_outline
135417718..5417939PHAGE_Entero_SfI_NC_027339: cII protein; FAR04_27205; phage(gi849250270)9.88e-10Showinfo_outline
145418025..5418822PHAGE_Escher_vB_EcoM_ep3_NC_025430: transcriptional regulator; FAR04_27210; phage(gi712913221)6.24e-73Showinfo_outline
155418882..5419847PHAGE_Entero_SfI_NC_027339: replication protein O; FAR04_27215; phage(gi849250271)1.55e-43Showinfo_outline
165419844..5420581PHAGE_Entero_SfI_NC_027339: replication protein P; FAR04_27220; phage(gi849250272)1.68e-105Showinfo_outline
175420578..5420880PHAGE_Serrat_phiMAM1_NC_020083: putative transcriptional regulator-HTH domain; FAR04_27225; phage(gi440789434)3.32e-06Showinfo_outline
185420877..5421299PHAGE_Vibrio_pYD38_A_NC_021534: hypothetical protein; FAR04_27230; phage(gi514051016)2.06e-17Showinfo_outline
195421296..5421417PHAGE_Salmon_ST64T_NC_004348: hypothetical protein; FAR04_27235; phage(gi24371562)3.40e-13Showinfo_outline

Region 10, total 17 CDS

#CDS PositionBLAST HitE-ValueSequence
15446588..5446758PHAGE_Entero_mEp234_NC_019715: major tail subunit; FAR04_27415; phage(gi428782264)2.18e-17Showinfo_outline
25446827..5447540PHAGE_Cronob_ENT47670_NC_019927: hypothetical protein; FAR04_27420; phage(gi431810508)9.23e-82Showinfo_outline
35447758..5448315PHAGE_Shigel_POCJ13_NC_025434: Rha protein; FAR04_27425; phage(gi725949745)1.63e-118Showinfo_outline
45448462..5448659hypothetical protein; FAR04_274300.0Showinfo_outline
55448628..5449101PHAGE_Pseudo_MD8_NC_031091: hypothetical protein; FAR04_27435; phage(gi100029)1.96e-09Showinfo_outline
65449284..5449535PHAGE_Salmon_SPN3UB_NC_019545: hypothetical protein; FAR04_27440; phage(gi423262403)7.00e-36Showinfo_outline
75449591..5450061hypothetical protein; FAR04_274450.0Showinfo_outline
85450153..5452723PHAGE_Cronob_ENT47670_NC_019927: putative tail protein; FAR04_27450; phage(gi431810494)2.39e-140Showinfo_outline
95452764..5452943Rrf2 family transcriptional regulator; FAR04_274550.0Showinfo_outline
10complement(5452963..5453376)PHAGE_Entero_HK225_NC_019717: hypothetical protein; FAR04_27460; phage(gi428782442)2.65e-89Showinfo_outline
115453547..5453966PHAGE_Cronob_ENT47670_NC_019927: hypothetical protein; FAR04_27465; phage(gi431810519)5.53e-43Showinfo_outline
125453966..5454436PHAGE_Cronob_ENT47670_NC_019927: hypothetical protein; FAR04_27470; phage(gi431810518)9.66e-35Showinfo_outline
135454433..5454734PHAGE_Cronob_ENT47670_NC_019927: hypothetical protein; FAR04_27475; phage(gi431810526)3.41e-36Showinfo_outline
145454806..5455114PHAGE_Stx2_c_1717_NC_011357: truncated transposase; FAR04_27480; phage(gi209447151)8.15e-08Showinfo_outline
155455111..5455461PHAGE_Stx2_c_1717_NC_011357: transposase; FAR04_27485; phage(gi209447152)4.21e-51Showinfo_outline
165455492..5455713hypothetical protein; FAR04_274900.0Showinfo_outline
175455665..5456006PHAGE_Stx2_c_1717_NC_011357: transposase; FAR04_27495; phage(gi209447153)5.82e-47Showinfo_outline

Region 11, total 52 CDS

#CDS PositionBLAST HitE-ValueSequence
15532570..5532581attL0.0Showinfo_outline
25543100..5544284PHAGE_Cronob_ENT47670_NC_019927: putative tail protein; FAR04_28145; phage(gi431810495)1.80e-124Showinfo_outline
35544372..5544574PHAGE_Cronob_ENT47670_NC_019927: hypothetical protein; FAR04_28150; phage(gi431810496)1.54e-07Showinfo_outline
4complement(5544695..5544952)replication regulatory protein RepA; FAR04_281550.0Showinfo_outline
5complement(5545236..5545385)PHAGE_Entero_933W_NC_000924: host killer protein; FAR04_28160; phage(gi9632541)9.72e-06Showinfo_outline
65545441..5545683hypothetical protein; FAR04_281650.0Showinfo_outline
7complement(5545629..5545862)hypothetical protein; FAR04_281700.0Showinfo_outline
8complement(5545932..5546068)PHAGE_Entero_P1_NC_005856: InsA; FAR04_28175; phage(gi46401643)1.33e-26Showinfo_outline
9complement(5546242..5547102)PHAGE_Salmon_SJ46_NC_031129: hypothetical protein; FAR04_28180; phage(gi100066)5.20e-57Showinfo_outline
105548347..5548487PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; FAR04_28190; phage(gi169257289)2.36e-06Showinfo_outline
115548484..5549293PHAGE_Phage_Gifsy_2_NC_010393: prophage antitermination protein; late gene regulator; Lamba gpQ homolog; FAR04_28195; phage(gi169257290)1.32e-77Showinfo_outline
125549631..5549855PHAGE_Escher_HK639_NC_016158: hypothetical protein; FAR04_28200; phage(gi356870658)1.13e-29Showinfo_outline
135549852..5550043PHAGE_Escher_TL_2011b_NC_019445: hypothetical protein; FAR04_28205; phage(gi418487639)6.00e-20Showinfo_outline
145550040..5550257TraR/DksA family transcriptional regulator; FAR04_282100.0Showinfo_outline
155550417..5550493PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage excisionase; FAR04_28215; phage(gi169257269)3.46e-05Showinfo_outline
165550494..5550732PHAGE_Salmon_SPN9CC_NC_017985: phage lysozyme; FAR04_28220; phage(gi389060531)4.66e-45Showinfo_outline
175550729..5551196PHAGE_Salmon_HK620_NC_002730: endopeptidase; FAR04_28225; phage(gi13559860)3.02e-77Showinfo_outline
18complement(5551525..5552121)PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; FAR04_28230; phage(gi169257286)6.91e-62Showinfo_outline
195552334..5553163PHAGE_Entero_phiP27_NC_003356: putative integrase; FAR04_28235; phage(gi18249865)3.98e-169Showinfo_outline
205553148..5553219LysR family transcriptional regulator; FAR04_282400.0Showinfo_outline
215553220..5553296attL0.0Showinfo_outline
225554173..5554247tRNA0.0Showinfo_outline
235554254..5554329tRNA0.0Showinfo_outline
245554335..5554410tRNA0.0Showinfo_outline
255554416..5554492tRNA0.0Showinfo_outline
26complement(5554916..5555559)hypothetical protein; FAR04_282700.0Showinfo_outline
275555903..5556564PHAGE_Cronob_ENT47670_NC_019927: putative tail protein; FAR04_28275; phage(gi431810495)2.44e-53Showinfo_outline
28complement(5556565..5557352)transketolase; FAR04_282800.0Showinfo_outline
29complement(5557353..5557668)PHAGE_Escher_pro483_NC_028943: DNA invertase; FAR04_28285; phage(gi971758535)1.16e-19Showinfo_outline
305557832..5558044DUF4158 domain-containing protein; FAR04_282900.0Showinfo_outline
315558118..5558198PHAGE_Shigel_SfIV_NC_022749: IS1 transposase B; FAR04_28295; phage(gi557307573)1.09e-10Showinfo_outline
32complement(5558228..5558773)PROPHAGE_Xantho_33913: Tn5041 transposase; FAR04_28300; phage(gi21231545)6.90e-19Showinfo_outline
335558863..5558997phage recombination protein Bet; FAR04_283050.0Showinfo_outline
345558994..5559539PHAGE_Pseudo_YMC11/02/R656_NC_028657: putative exonuclease; FAR04_28310; phage(gi966197818)1.06e-68Showinfo_outline
355559668..5560123PHAGE_Entero_HK225_NC_019717: NinB protein; FAR04_28315; phage(gi428782436)1.64e-71Showinfo_outline
36complement(5560262..5560868)PROPHAGE_Brucel_1330: transposase, putative; FAR04_28320; phage(gi23502708)8.09e-39Showinfo_outline
37complement(5560869..5561506)elongation factor Tu; FAR04_283250.0Showinfo_outline
385562110..5562346PHAGE_Salmon_SPN3UB_NC_019545: hypothetical protein; FAR04_28335; phage(gi423262443)1.61e-40Showinfo_outline
395562349..5562690PHAGE_Salmon_vB_SemP_Emek_NC_018275: lysin; FAR04_28340; phage(gi399498856)1.45e-57Showinfo_outline
405562901..5563140PHAGE_Entero_HK225_NC_019717: hypothetical protein; FAR04_28345; phage(gi428782404)6.37e-23Showinfo_outline
415563270..5563745Tn3-like element Tn3 family transposase; FAR04_283500.0Showinfo_outline
425564311..5564387attR0.0Showinfo_outline
435564388..5564924PHAGE_Cronob_ENT47670_NC_019927: putative tail protein; FAR04_28360; phage(gi431810495)3.78e-30Showinfo_outline
44complement(5564925..5565301)PHAGE_Phage_Gifsy_2_NC_010393: NinG; FAR04_28365; phage(gi169257288)2.00e-25Showinfo_outline
45complement(5565294..5565455)PHAGE_Escher_HK639_NC_016158: NinE; FAR04_28370; phage(gi356870663)2.26e-20Showinfo_outline
46complement(5565808..5565870)LysR family transcriptional regulator; FAR04_283750.0Showinfo_outline
47complement(5566179..5566497)PHAGE_Salmon_SJ46_NC_031129: prohead core protein protease; FAR04_28380; phage(gi100061)1.13e-08Showinfo_outline
485566498..5566573tRNA0.0Showinfo_outline
495566635..5566711tRNA0.0Showinfo_outline
505566945..5567007tRNA0.0Showinfo_outline
515566947..5566958attR0.0Showinfo_outline
525567143..5567427PHAGE_Entero_phi80_NC_021190: host RecBCD/SbcCD enzymes inhibitor; FAR04_28400; phage(gi824479615)1.87e-19Showinfo_outline
Klebsiella pneumoniae subsp
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Intact (score > 90)
Questionable (score 70-90)
Incomplete (score < 70)

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Length: 5567509 bps
Phages: 11
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Click on a sequence to see details.