Submission Results

Sequence Name: Not Available

GenBank Accession Number: STEH00000000.1

GenInfo (GI) Number: 0000000000

Download Results: STEH00000000.1.PHASTER.zip

gi|00000000|ref|STEH00000000.1| Klebsiella pneumoniae subsp. pneumoniae strain SIKP162, whole 5628972, gc%: 57.18%

Download summary as .txt file: summary.txt file_download

Total: 7 prophage regions have been identified, of which 3 regions are intact, 2 regions are incomplete, and 2 regions are questionable.

RegionRegion LengthCompletenessScore# Total ProteinsRegion PositionMost Common PhageGC %Details
141Kbintact10027249365-290435 info_outlinePHAGE_Salmon_ST64B_NC_004313(3)51.57%Show info_outline
234.2Kbintact15049651453-685727 info_outlinePHAGE_Salmon_Fels_2_NC_010463(37)51.00%Show info_outline
352Kbintact130612835436-2887534 info_outlinePHAGE_Salmon_SEN34_NC_028699(25)54.46%Show info_outline
414.7Kbincomplete30114088721-4103471 info_outlinePHAGE_Entero_P4_NC_001609(6)52.29%Show info_outline
512.5Kbquestionable75144802684-4815187 info_outlinePHAGE_Entero_P4_NC_001609(7)50.26%Show info_outline
628.9Kbquestionable80365135841-5164810 info_outlinePHAGE_Cronob_ENT47670_NC_019927(14)51.82%Show info_outline
724.8Kbincomplete20285276428-5301261 info_outlinePHAGE_Escher_HK639_NC_016158(6)52.96%Show info_outline
Intact (score > 90)
Questionable (score 70-90)
Incomplete (score < 70)
Region: The number assigned to the region.
Region Length: The length of the sequence of that region (in bp).
Completeness: A prediction of whether the region contains a intact or incomplete prophage based on the above criteria.
Score: The score of the region based on the above criteria.
# Total Proteins: The number of ORFs present in the region.
Region Position: The start and end positions of the region on the bacterial chromosome.
Most Common Phage: The phage(s) with the highest number of proteins most similar to those in the region.
GC %: The percentage of GC nucleotides of the region.

Criteria for scoring prophage regions (as intact, questionable, or incomplete):
Method 1:

  1. If the number of certain phage organism in this table is more than or equal to 100% of the total number of CDS of the region, the region is marked with total score 150. If less than 100%, method 2 and 3 will be used.
Method 2:
  1. If the number of certain phage organism in this table is more than 50% of the total number of CDS of the region, that phage organism is considered as the major potential phage for that region; the percentage of the total number of that phage organism in this table in the total number of proteins of the region is calculated and then multipled by 100; the percentage of the length of that phage organism in this table in the length of the region is calculated and then multipled by 50 (phage head's encapsulation capability is considered).
Method 3:
  1. If any of the specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin') are present, the score will be increased by 10 for each keyword found.
  2. If the size of the region is greater than 30 Kb, the score will be increased by 10.
  3. If there are at least 40 proteins in the region, the score will be increased by 10.
  4. If all of the phage-related proteins and hypothetical proteins constitute more than 70% of the total number of proteins in the region, the score will be increased by 10.
Compared the total score of method 2 with the total score of method 3, the bigger one is chosen as the total score of the region.
If the region's total score is less than 70, it is marked as incomplete; if between 70 to 90, it is marked as questionable; if greater than 90, it is marked as intact.

gi|00000000|ref|STEH00000000.1| Klebsiella pneumoniae subsp. pneumoniae strain SIKP162, whole 5628972, gc%: 57.18%

Download details as .txt file: detail.txt file_download

Hits against Virus and Prophage Database
Hits against Bacterial Database or GenBank File

Region 1, total 30 CDS

#CDS PositionBLAST HitE-ValueSequence
1249365..249376attL0.0Showinfo_outline
2256516..257967PHAGE_Aeromo_44RR2.8t_NC_005135: hypothetical protein; FAT94_01325; phage(gi37651715)1.21e-06Showinfo_outline
3257979..25886050S ribosomal protein L11 methyltransferase; FAT94_013300.0Showinfo_outline
4258833..259060hypothetical protein; FAT94_013350.0Showinfo_outline
5259218..260183tRNA dihydrouridine synthase DusB; FAT94_013400.0Showinfo_outline
6260208..260504DNA-binding transcriptional regulator Fis; FAT94_013450.0Showinfo_outline
7complement(260658..260849)hypothetical protein; FAT94_013500.0Showinfo_outline
8complement(260852..262513)PHAGE_Brucel_BiPBO1_NC_031264: hypothetical protein; FAT94_01355; phage(gi100002)4.39e-103Showinfo_outline
9complement(262497..262853)PHAGE_Psychr_Psymv2_NC_023734: terminase small subunit; FAT94_01360; phage(gi593779760)7.40e-18Showinfo_outline
10complement(262811..263002)terminase; FAT94_013650.0Showinfo_outline
11complement(263129..263572)PHAGE_Burkho_phiE125_NC_003309: putative class I holin; FAT94_01370; phage(gi17975232)8.92e-14Showinfo_outline
12complement(263572..263871)PHAGE_Shigel_SfII_NC_021857: head-tail connector protein; FAT94_01375; phage(gi526244642)2.27e-08Showinfo_outline
13complement(263868..264203)PHAGE_Entero_mEpX1_NC_019709: head-tail connector II; FAT94_01380; phage(gi428781879)2.40e-24Showinfo_outline
14complement(264200..265441)PHAGE_Shigel_SfIV_NC_022749: portal protein; FAT94_01385; phage(gi557307529)3.89e-58Showinfo_outline
15complement(265443..266003)PHAGE_Clostr_phi3626_NC_003524: putative prohead protease; FAT94_01390; phage(gi20065968)6.67e-31Showinfo_outline
16complement(266055..267221)PHAGE_Entero_SfI_NC_027339: phage major capsid protein; FAT94_01395; phage(gi849250290)1.82e-60Showinfo_outline
17267485..267997hypothetical protein; FAT94_014000.0Showinfo_outline
18complement(268046..268381)hypothetical protein; FAT94_014050.0Showinfo_outline
19complement(268724..270859)PHAGE_Thermo_THSA_485A_NC_018264: protein of unknown function DUF927; FAT94_01410; phage(gi397912648)2.15e-19Showinfo_outline
20complement(270859..271224)hypothetical protein; FAT94_014150.0Showinfo_outline
21complement(271221..271589)hypothetical protein; FAT94_014200.0Showinfo_outline
22complement(271586..271900)hypothetical protein; FAT94_014250.0Showinfo_outline
23complement(271893..272081)hypothetical protein; FAT94_014300.0Showinfo_outline
24complement(272074..272343)host cell division inhibitor Icd-like protein; FAT94_014350.0Showinfo_outline
25272477..272671toxin-antitoxin system HicB family antitoxin; FAT94_014400.0Showinfo_outline
26complement(272795..273574)PHAGE_Entero_HK022_NC_002166: Roi; FAT94_01445; phage(gi19343392)5.14e-51Showinfo_outline
27complement(273585..273869)PHAGE_Entero_P4_NC_001609: transcriptional regulator; FAT94_01450; phage(gi9627517)2.17e-07Showinfo_outline
28complement(274051..274992)hypothetical protein; FAT94_014550.0Showinfo_outline
29complement(275085..276311)PHAGE_Entero_phi80_NC_021190: integrase; FAT94_01460; phage(gi824479609)2.63e-62Showinfo_outline
30290435..290446attR0.0Showinfo_outline

Region 2, total 51 CDS

#CDS PositionBLAST HitE-ValueSequence
1651453..651471attL0.0Showinfo_outline
2complement(651544..651762)PHAGE_Salmon_Fels_2_NC_010463: P2 gpOgr-like protein (acttivation of late gene expression); FAT94_03315; phage(gi169936018)1.05e-27Showinfo_outline
3complement(651853..652953)PHAGE_Salmon_Fels_2_NC_010463: tail protein; FAT94_03320; phage(gi169936019)0.0Showinfo_outline
4complement(652950..653435)PHAGE_Salmon_Fels_2_NC_010463: P2 gpU-like tail protein; FAT94_03325; phage(gi169936020)5.21e-98Showinfo_outline
5complement(653432..656509)PHAGE_Salmon_Fels_2_NC_010463: P2 gpT-like tail protein; FAT94_03330; phage(gi169936021)0.0Showinfo_outline
6complement(656502..656621)PHAGE_Salmon_Fels_2_NC_010463: P2 gpE-like protein; FAT94_03335; phage(gi169936022)2.27e-19Showinfo_outline
7complement(656636..656938)PHAGE_Salmon_Fels_2_NC_010463: P2 gpE-like tail protein; FAT94_03340; phage(gi169936023)1.50e-58Showinfo_outline
8complement(656993..657508)PHAGE_Salmon_Fels_2_NC_010463: major tail tube protein; FAT94_03345; phage(gi169936024)8.14e-118Showinfo_outline
9complement(657518..658690)PHAGE_Salmon_Fels_2_NC_010463: major tail sheath protein; FAT94_03350; phage(gi169936025)0.0Showinfo_outline
10complement(658833..659399)PHAGE_Salmon_Fels_2_NC_010463: DNA-invertase; FAT94_03355; phage(gi169936026)1.98e-112Showinfo_outline
11659430..659936PHAGE_Erwini_ENT90_NC_019932: phage tail collar domain protein; FAT94_03360; phage(gi431810938)1.30e-15Showinfo_outline
12659939..660349PHAGE_Bacter_APSE_2_NC_011551: tail fiber; FAT94_03365; phage(gi212499733)6.46e-25Showinfo_outline
13complement(660330..660563)hypothetical protein; FAT94_033700.0Showinfo_outline
14complement(660566..662050)PHAGE_Salmon_Fels_2_NC_010463: P2 gpH-like protein; FAT94_03375; phage(gi169936030)1.73e-144Showinfo_outline
15complement(662047..662652)PHAGE_Salmon_Fels_2_NC_010463: P2 gpI-like baseplate assembly protein; FAT94_03380; phage(gi169936031)1.62e-139Showinfo_outline
16complement(662645..663553)PHAGE_Salmon_Fels_2_NC_010463: baseplate assembly protein; FAT94_03385; phage(gi169936032)0.0Showinfo_outline
17complement(663540..663899)PHAGE_Salmon_Fels_2_NC_010463: baseplate wedge subunit; FAT94_03390; phage(gi169936033)1.22e-67Showinfo_outline
18complement(663896..664474)PHAGE_Salmon_Fels_2_NC_010463: P2 gpV-like protein; FAT94_03395; phage(gi169936034)5.34e-120Showinfo_outline
19complement(664543..664989)PHAGE_Salmon_Fels_2_NC_010463: P2 gpS-like tail completion protein; FAT94_03400; phage(gi169936035)3.34e-94Showinfo_outline
20complement(664982..665413)PHAGE_Salmon_Fels_2_NC_010463: P2 gpR-like tail completion protein; FAT94_03405; phage(gi169936036)6.32e-93Showinfo_outline
21complement(665376..665579)PHAGE_Salmon_Fels_2_NC_010463: P2 LysC-like protein; FAT94_03410; phage(gi169936037)1.97e-30Showinfo_outline
22complement(665509..665937)PHAGE_Salmon_Fels_2_NC_010463: P2 LysB-like protein; FAT94_03415; phage(gi169936038)1.14e-62Showinfo_outline
23complement(665934..666311)hypothetical protein; FAT94_034200.0Showinfo_outline
24complement(666313..666786)PHAGE_Salmon_Fels_2_NC_010463: endolysin; FAT94_03425; phage(gi169936041)3.31e-103Showinfo_outline
25complement(666806..667021)PHAGE_Salmon_Fels_2_NC_010463: lysis protein; FAT94_03430; phage(gi169936042)6.57e-37Showinfo_outline
26complement(667025..667228)PHAGE_Salmon_Fels_2_NC_010463: P2 gpX-like tail protein; FAT94_03435; phage(gi169936043)7.14e-41Showinfo_outline
27complement(667228..667692)PHAGE_Salmon_Fels_2_NC_010463: P2 gpL-like protein; FAT94_03440; phage(gi169936044)3.17e-101Showinfo_outline
28complement(667788..668438)PHAGE_Salmon_Fels_2_NC_010463: terminase endonuclease subunit; FAT94_03445; phage(gi169936045)5.46e-126Showinfo_outline
29complement(668442..669500)PHAGE_Salmon_Fels_2_NC_010463: capsid protein; FAT94_03450; phage(gi169936046)0.0Showinfo_outline
30complement(669517..670350)PHAGE_Salmon_Fels_2_NC_010463: capsid-scaffolding protein; FAT94_03455; phage(gi169936047)1.27e-174Showinfo_outline
31670493..672259PHAGE_Salmon_Fels_2_NC_010463: terminase ATPase subunit; FAT94_03460; phage(gi169936048)0.0Showinfo_outline
32672259..673290PHAGE_Salmon_Fels_2_NC_010463: portal vertex protein; FAT94_03465; phage(gi169936049)0.0Showinfo_outline
33complement(673316..674278)PHAGE_Thermu_OH2_NC_021784: SMF family protein; FAT94_03470; phage(gi526118339)8.43e-25Showinfo_outline
34complement(674283..674852)phosphoribosyltransferase; FAT94_034750.0Showinfo_outline
35complement(675203..675508)PHAGE_Salmon_Fels_2_NC_010463: TumB protein; FAT94_03480; phage(gi169936052)5.37e-50Showinfo_outline
36complement(675447..675635)PHAGE_Salmon_Fels_2_NC_010463: hypothetical protein; FAT94_03485; phage(gi169936053)1.39e-38Showinfo_outline
37complement(675789..678203)PHAGE_Salmon_Fels_2_NC_010463: P2 gpA-like protein; FAT94_03490; phage(gi169936054)0.0Showinfo_outline
38complement(678200..679057)PHAGE_Salmon_Fels_2_NC_010463: DNA adenine methylase-like protein; FAT94_03495; phage(gi169936055)2.80e-151Showinfo_outline
39complement(679054..679356)PHAGE_Entero_WPhi_NC_005056: gp91; FAT94_03500; phage(gi33438937)8.72e-18Showinfo_outline
40complement(679353..679580)PHAGE_Salmon_Fels_2_NC_010463: DksA-like zinc finger domain containing protein; FAT94_03505; phage(gi169936056)1.38e-43Showinfo_outline
41complement(679580..679813)PHAGE_Salmon_Fels_2_NC_010463: hypothetical protein; FAT94_03510; phage(gi169936057)4.34e-35Showinfo_outline
42complement(679881..680222)PHAGE_Salmon_Fels_2_NC_010463: hypothetical protein; FAT94_03515; phage(gi169936058)8.14e-68Showinfo_outline
43680304..680552hypothetical protein; FAT94_035200.0Showinfo_outline
44complement(680638..680934)PHAGE_Salmon_Fels_2_NC_010463: hypothetical protein; FAT94_03525; phage(gi169936060)1.63e-16Showinfo_outline
45complement(680942..681451)PHAGE_Salmon_Fels_2_NC_010463: bacteriophage regulatory protein CII; FAT94_03530; phage(gi169936061)5.62e-112Showinfo_outline
46complement(681484..681705)PHAGE_Haemop_HP2_NC_003315: orf2(S)cox; FAT94_03535; phage(gi17981819)1.07e-05Showinfo_outline
47681831..682712PHAGE_Salmon_Fels_2_NC_010463: P2 CI-like protein; FAT94_03540; phage(gi169936063)1.13e-50Showinfo_outline
48682793..683995hypothetical protein; FAT94_035450.0Showinfo_outline
49683997..684518hypothetical protein; FAT94_035500.0Showinfo_outline
50684600..685652PHAGE_Salmon_SEN1_NC_029003: integrase; FAT94_03555; phage(gi971764936)1.80e-131Showinfo_outline
51685727..685745attR0.0Showinfo_outline

Region 3, total 63 CDS

#CDS PositionBLAST HitE-ValueSequence
12835436..2835447attL0.0Showinfo_outline
22835535..2836716PHAGE_Salmon_SEN34_NC_028699: integrase; FAT94_14085; phage(gi966201449)0.0Showinfo_outline
3complement(2836697..2836939)PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; FAT94_14090; phage(gi966201450)1.74e-29Showinfo_outline
4complement(2837118..2837597)hypothetical protein; FAT94_140950.0Showinfo_outline
5complement(2837594..2837806)hypothetical protein; FAT94_141000.0Showinfo_outline
6complement(2837803..2838027)PHAGE_Salmon_Fels_1_NC_010391: hypothetical protein; FAT94_14105; phage(gi169257161)1.09e-24Showinfo_outline
7complement(2838017..2838727)PHAGE_Entero_phiP27_NC_003356: hypothetical protein; FAT94_14110; phage(gi18249878)3.63e-99Showinfo_outline
8complement(2838733..2839251)PHAGE_Entero_phiP27_NC_003356: hypothetical protein; FAT94_14115; phage(gi18249870)1.95e-50Showinfo_outline
9complement(2839356..2840183)PHAGE_Entero_phiP27_NC_003356: putative serine protease; FAT94_14120; phage(gi18249869)1.59e-167Showinfo_outline
10complement(2840180..2840374)hypothetical protein; FAT94_141250.0Showinfo_outline
11complement(2840371..2840796)PHAGE_Salmon_Fels_1_NC_010391: hypothetical protein; FAT94_14130; phage(gi169257164)2.40e-52Showinfo_outline
12complement(2840793..2841011)hypothetical protein; FAT94_141350.0Showinfo_outline
13complement(2840983..2841237)PHAGE_Salmon_Fels_1_NC_010391: hypothetical protein; FAT94_14140; phage(gi169257165)1.90e-36Showinfo_outline
14complement(2841230..2841595)PHAGE_Cronob_ENT39118_NC_019934: hypothetical protein; FAT94_14145; phage(gi431811077)7.71e-41Showinfo_outline
15complement(2841765..2841953)PHAGE_Salmon_Fels_1_NC_010391: hypothetical protein; FAT94_14150; phage(gi169257169)1.16e-11Showinfo_outline
16complement(2841946..2842260)PHAGE_Salmon_Fels_1_NC_010391: hypothetical protein; FAT94_14155; phage(gi169257170)9.37e-24Showinfo_outline
17complement(2842431..2843099)PHAGE_Entero_IME10_NC_019501: repressor protein; FAT94_14160; phage(gi422934295)1.43e-92Showinfo_outline
182843197..2843418PHAGE_Salmon_SEN22_NC_028696: putative repressor protein; FAT94_14165; phage(gi966201352)2.25e-14Showinfo_outline
192843393..2843686PHAGE_Salmon_Fels_1_NC_010391: hypothetical protein; FAT94_14170; phage(gi169257173)2.81e-39Showinfo_outline
202843995..2845653PHAGE_Salmon_Fels_1_NC_010391: putative helicase; FAT94_14175; phage(gi169257175)0.0Showinfo_outline
212845655..2846617PHAGE_Salmon_Fels_1_NC_010391: putative bacteriophage DNA primase; FAT94_14180; phage(gi169257176)0.0Showinfo_outline
222846614..2847090PHAGE_Salmon_Fels_1_NC_010391: hypothetical protein; FAT94_14185; phage(gi169257177)8.69e-18Showinfo_outline
232847087..2847869PHAGE_Cronob_ENT39118_NC_019934: antitermination protein; FAT94_14190; phage(gi431811056)1.03e-148Showinfo_outline
242848275..2848523PHAGE_Entero_phi80_NC_021190: holin; FAT94_14195; phage(gi824479635)7.59e-09Showinfo_outline
252848526..2849056PHAGE_Entero_mEp460_NC_019716: endolysin; FAT94_14200; phage(gi428782372)3.39e-101Showinfo_outline
262849053..2849442PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; FAT94_14205; phage(gi100132)3.46e-32Showinfo_outline
272849327..2849584PHAGE_Shigel_SfII_NC_021857: o-spanin; FAT94_14210; phage(gi526244688)5.55e-33Showinfo_outline
282849677..2849997negative regulator GrlR; FAT94_142150.0Showinfo_outline
292850099..2850851PHAGE_Edward_GF_2_NC_026611: putative terminase small subunit; FAT94_14220; phage(gi764162248)5.19e-17Showinfo_outline
302850802..2852202PHAGE_Edward_GF_2_NC_026611: putative terminase large subunit; FAT94_14225; phage(gi764162249)0.0Showinfo_outline
312852440..2853891PHAGE_Salmon_SEN34_NC_028699: putative portal protein; FAT94_14230; phage(gi966201420)0.0Showinfo_outline
322853947..2854495PHAGE_Salmon_SEN34_NC_028699: putative head morphogenesis protein; FAT94_14235; phage(gi966201421)1.86e-64Showinfo_outline
332854547..2855749PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; FAT94_14240; phage(gi966201422)2.18e-137Showinfo_outline
342855753..2856247PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; FAT94_14245; phage(gi966201423)2.68e-55Showinfo_outline
352856259..2857200PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; FAT94_14250; phage(gi966201424)1.98e-167Showinfo_outline
362857240..2857521PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; FAT94_14255; phage(gi966201425)2.38e-09Showinfo_outline
372857490..2857909PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; FAT94_14260; phage(gi966201426)2.17e-54Showinfo_outline
382857906..2858412PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; FAT94_14265; phage(gi966201427)6.31e-22Showinfo_outline
392858412..2858798PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; FAT94_14270; phage(gi966201428)4.77e-60Showinfo_outline
402858893..2859333PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; FAT94_14275; phage(gi966201429)1.29e-41Showinfo_outline
412859337..2860482PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; FAT94_14280; phage(gi966201430)9.77e-178Showinfo_outline
422860493..2860933PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; FAT94_14285; phage(gi966201431)1.31e-84Showinfo_outline
432860937..2861362PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; FAT94_14290; phage(gi966201432)5.13e-47Showinfo_outline
442861398..2861550NTP pyrophosphohydrolase; FAT94_142950.0Showinfo_outline
452861540..2863543PHAGE_Salmon_SEN34_NC_028699: tail tape measure protein; FAT94_14300; phage(gi966201433)0.0Showinfo_outline
462863543..2864142PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; FAT94_14305; phage(gi966201434)1.24e-73Showinfo_outline
472864143..2864445PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; FAT94_14310; phage(gi966201435)3.66e-34Showinfo_outline
482864448..2865470PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; FAT94_14315; phage(gi966201436)5.26e-112Showinfo_outline
492865470..2865811PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; FAT94_14320; phage(gi966201437)1.45e-05Showinfo_outline
50complement(2865864..2866049)hypothetical protein; FAT94_143250.0Showinfo_outline
512866086..2866652hypothetical protein; FAT94_143300.0Showinfo_outline
522866706..2867359PHAGE_Salmon_SEN34_NC_028699: baseplate assembly protein; FAT94_14335; phage(gi966201439)2.22e-76Showinfo_outline
532867361..2867714PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; FAT94_14340; phage(gi966201441)6.84e-59Showinfo_outline
542867714..2868910PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; FAT94_14345; phage(gi966201442)0.0Showinfo_outline
552868907..2869680PHAGE_Salmon_SEN34_NC_028699: hypothetical protein; FAT94_14350; phage(gi966201443)4.21e-91Showinfo_outline
562869680..2870546PHAGE_Salmon_SEN34_NC_028699: tail fiber protein; FAT94_14355; phage(gi966201444)1.50e-26Showinfo_outline
572870546..2870743hypothetical protein; FAT94_143600.0Showinfo_outline
582870799..2872426PHAGE_Klebsi_PKP126_NC_031053: hypothetical protein; FAT94_14365; phage(gi100059)6.85e-13Showinfo_outline
592872427..2872725hypothetical protein; FAT94_143700.0Showinfo_outline
60complement(2872654..2873301)TetR/AcrR family transcriptional regulator; FAT94_143750.0Showinfo_outline
612873382..2874875PHAGE_Mycoba_Enkosi_NC_028936: transporter-like protein; FAT94_14380; phage(gi971757643)2.72e-19Showinfo_outline
62complement(2874872..2875786)PHAGE_Burkho_phi1026b_NC_005284: gp58; FAT94_14385; phage(gi38707948)4.77e-08Showinfo_outline
632887534..2887545attR0.0Showinfo_outline

Region 4, total 13 CDS

#CDS PositionBLAST HitE-ValueSequence
14088721..4088732attL0.0Showinfo_outline
2complement(4094538..4096871)PHAGE_Entero_P4_NC_001609: DNA primase; FAT94_20345; phage(gi9627512)0.0Showinfo_outline
3complement(4096883..4097203)PHAGE_Entero_P4_NC_001609: hypothetical protein; FAT94_20350; phage(gi9627513)2.01e-65Showinfo_outline
4complement(4097200..4097427)hypothetical protein; FAT94_203550.0Showinfo_outline
5complement(4097424..4097981)PHAGE_Entero_P4_NC_001609: putative CI repressor; FAT94_20360; phage(gi9627516)1.70e-46Showinfo_outline
6complement(4097978..4098244)PHAGE_Entero_P4_NC_001609: transcriptional regulator; FAT94_20365; phage(gi9627517)3.30e-42Showinfo_outline
74098786..4099523PHAGE_Entero_P4_NC_001609: head size determination protein sid; FAT94_20370; phage(gi9627518)5.82e-99Showinfo_outline
84099520..4099765PHAGE_Erwini_ENT90_NC_019932: transcriptional regulator; FAT94_20375; phage(gi431810990)6.18e-18Showinfo_outline
94099783..4100349PHAGE_Entero_P4_NC_001609: amber mutation-suppressing protein; FAT94_20380; phage(gi9627520)1.18e-75Showinfo_outline
10complement(4100918..4101343)hypothetical protein; FAT94_203850.0Showinfo_outline
11complement(4101343..4102293)PHAGE_Lactob_LF1_NC_019486: chromosome partitioning ATPase; FAT94_20390; phage(gi418489414)1.87e-17Showinfo_outline
124101995..4102006attR0.0Showinfo_outline
13complement(4102281..4103471)PROPHAGE_Escher_Sakai: putative integrase; FAT94_20395; phage(gi15833788)0.0Showinfo_outline

Region 5, total 16 CDS

#CDS PositionBLAST HitE-ValueSequence
14802684..4802697attL0.0Showinfo_outline
24802868..4804130PHAGE_Entero_P4_NC_001609: integrase; FAT94_23905; phage(gi9627511)0.0Showinfo_outline
3complement(4804188..4805198)hypothetical protein; FAT94_239100.0Showinfo_outline
4complement(4805149..4805685)hypothetical protein; FAT94_239150.0Showinfo_outline
5complement(4805686..4806765)hypothetical protein; FAT94_239200.0Showinfo_outline
6complement(4807506..4808072)PHAGE_Entero_P4_NC_001609: amber mutation-suppressing protein; FAT94_23925; phage(gi9627520)2.48e-75Showinfo_outline
7complement(4808090..4808335)PHAGE_Entero_186_NC_001317: B protein; FAT94_23930; phage(gi9634083)8.88e-18Showinfo_outline
8complement(4808332..4809069)PHAGE_Entero_P4_NC_001609: head size determination protein sid; FAT94_23935; phage(gi9627518)1.59e-95Showinfo_outline
9complement(4809551..4809672)ABC transporter permease; FAT94_239400.0Showinfo_outline
104809630..4809960PHAGE_Entero_P4_NC_001609: transcriptional regulator; FAT94_23945; phage(gi9627517)6.01e-41Showinfo_outline
114809893..4810441PHAGE_Entero_P4_NC_001609: putative CI repressor; FAT94_23950; phage(gi9627516)3.35e-46Showinfo_outline
124810438..4810665hypothetical protein; FAT94_239550.0Showinfo_outline
134810662..4810982PHAGE_Entero_P4_NC_001609: hypothetical protein; FAT94_23960; phage(gi9627513)2.19e-65Showinfo_outline
144810997..4813330PHAGE_Entero_P4_NC_001609: DNA primase; FAT94_23965; phage(gi9627512)0.0Showinfo_outline
154813872..4813885attR0.0Showinfo_outline
164814076..4815187PROPHAGE_Salmon_LT2: transposase; FAT94_23970; phage(gi16766077)8.31e-46Showinfo_outline

Region 6, total 36 CDS

#CDS PositionBLAST HitE-ValueSequence
1complement(5135841..5137964)PHAGE_Bacill_SPbeta_NC_001884: ABC transporter; FAT94_25610; phage(gi9630145)1.05e-35Showinfo_outline
2complement(5138047..5138108)PHAGE_Shigel_SfIV_NC_022749: IS1 transposase B; FAT94_25615; phage(gi557307573)4.00e-06Showinfo_outline
3complement(5138109..5138971)PHAGE_Cronob_ENT47670_NC_019927: hypothetical protein; FAT94_25620; phage(gi431810496)4.72e-06Showinfo_outline
4complement(5139058..5141535)PHAGE_Cronob_ENT47670_NC_019927: putative tail protein; FAT94_25625; phage(gi431810495)0.0Showinfo_outline
5complement(5141522..5141917)PHAGE_Cronob_ENT47670_NC_019927: hypothetical protein; FAT94_25630; phage(gi431810526)1.02e-44Showinfo_outline
6complement(5141914..5142384)PHAGE_Cronob_ENT47670_NC_019927: hypothetical protein; FAT94_25635; phage(gi431810518)4.34e-35Showinfo_outline
7complement(5142384..5142803)PHAGE_Cronob_ENT47670_NC_019927: hypothetical protein; FAT94_25640; phage(gi431810519)7.89e-43Showinfo_outline
8complement(5142903..5146349)PHAGE_Vibrio_pYD38_A_NC_021534: tail length tape measure protein; FAT94_25645; phage(gi514051037)0.0Showinfo_outline
9complement(5146442..5146945)PHAGE_Brucel_BiPBO1_NC_031264: hypothetical protein; FAT94_25650; phage(gi100067)1.10e-06Showinfo_outline
10complement(5147073..5147858)PHAGE_Escher_PA2_NC_028449: antirepressor protein; FAT94_25655; phage(gi953358051)1.05e-39Showinfo_outline
11complement(5147924..5148637)PHAGE_Salmon_SPN3UB_NC_019545: hypothetical protein; FAT94_25660; phage(gi423262398)4.10e-66Showinfo_outline
12complement(5148627..5148797)PHAGE_Salmon_vB_SosS_Oslo_NC_018279: Arc-like DNA binding domain protein; FAT94_25665; phage(gi399528776)6.62e-26Showinfo_outline
135148897..5149256PHAGE_Salmon_SPN3UB_NC_019545: Arc-like DNA binding domain protein; FAT94_25670; phage(gi423262396)1.37e-18Showinfo_outline
14complement(5149273..5149743)hypothetical protein; FAT94_256750.0Showinfo_outline
15complement(5150037..5150291)PHAGE_Entero_mEp235_NC_019708: hypothetical protein; FAT94_25680; phage(gi428781870)4.15e-29Showinfo_outline
16complement(5150294..5151049)PHAGE_Entero_mEpX1_NC_019709: hypothetical protein; FAT94_25685; phage(gi428781933)1.57e-75Showinfo_outline
17complement(5151225..5151902)PHAGE_Cronob_ENT47670_NC_019927: hypothetical protein; FAT94_25690; phage(gi431810508)3.78e-96Showinfo_outline
18complement(5151955..5152707)PHAGE_Cronob_ENT47670_NC_019927: major tail subunit; FAT94_25695; phage(gi431810520)3.45e-41Showinfo_outline
19complement(5152776..5153168)PHAGE_Cronob_ENT47670_NC_019927: hypothetical protein; FAT94_25700; phage(gi431810530)1.90e-44Showinfo_outline
20complement(5153165..5153590)PHAGE_Vibrio_pYD38_A_NC_021534: hypothetical protein; FAT94_25705; phage(gi514050969)4.88e-39Showinfo_outline
21complement(5153593..5153955)PHAGE_Mannhe_vB_MhS_535AP2_NC_028853: hypothetical protein; FAT94_25710; phage(gi971749596)4.02e-26Showinfo_outline
22complement(5153955..5154128)PHAGE_Salmon_vB_SosS_Oslo_NC_018279: hypothetical protein; FAT94_25715; phage(gi399528768)3.79e-19Showinfo_outline
23complement(5154128..5154508)PHAGE_Cronob_ENT47670_NC_019927: hypothetical protein; FAT94_25720; phage(gi431810531)2.95e-39Showinfo_outline
24complement(5154511..5154750)hypothetical protein; FAT94_257250.0Showinfo_outline
25complement(5154761..5155855)PHAGE_Cronob_ENT47670_NC_019927: hypothetical protein; FAT94_25730; phage(gi431810503)7.34e-161Showinfo_outline
26complement(5155867..5156295)PHAGE_Cronob_ENT47670_NC_019927: hypothetical protein; FAT94_25735; phage(gi431810525)1.15e-56Showinfo_outline
27complement(5156299..5157684)PHAGE_Cronob_ENT47670_NC_019927: hypothetical protein; FAT94_25740; phage(gi431810499)0.0Showinfo_outline
28complement(5157757..5158233)hypothetical protein; FAT94_257450.0Showinfo_outline
29complement(5158275..5159279)PHAGE_Cronob_ENT47670_NC_019927: phage head morphogenesis; FAT94_25750; phage(gi431810507)1.44e-150Showinfo_outline
30complement(5159254..5160675)PHAGE_Cronob_ENT47670_NC_019927: hypothetical protein; FAT94_25755; phage(gi431810500)0.0Showinfo_outline
31complement(5160688..5162160)PHAGE_Cronob_phiES15_NC_018454: terminase large subunit; FAT94_25760; phage(gi401817592)0.0Showinfo_outline
32complement(5162160..5162762)PHAGE_Escher_HK639_NC_016158: terminase small subunit; FAT94_25765; phage(gi356870601)3.46e-104Showinfo_outline
335163133..5163462hypothetical protein; FAT94_257700.0Showinfo_outline
34complement(5163568..5164032)PHAGE_Salmon_HK620_NC_002730: endopeptidase; FAT94_25775; phage(gi13559860)1.45e-77Showinfo_outline
35complement(5164029..5164559)PHAGE_Escher_TL_2011c_NC_019442: lysozyme; FAT94_25780; phage(gi418487070)1.65e-100Showinfo_outline
36complement(5164562..5164810)PHAGE_Entero_phi80_NC_021190: holin; FAT94_25785; phage(gi824479635)1.05e-08Showinfo_outline

Region 7, total 30 CDS

#CDS PositionBLAST HitE-ValueSequence
15276428..5276439attL0.0Showinfo_outline
2complement(5276671..5277714)PHAGE_Escher_HK639_NC_016158: integrase; FAT94_26445; phage(gi356870629)0.0Showinfo_outline
3complement(5277711..5278046)PHAGE_Cronob_ENT47670_NC_019927: excisionase; FAT94_26450; phage(gi431810536)1.32e-09Showinfo_outline
4complement(5278048..5278263)PHAGE_Stx2_vB_EcoP_24B_NC_027984: putative C4 zinc finger protein; FAT94_26455; phage(gi937456240)7.19e-17Showinfo_outline
5complement(5278265..5278483)PHAGE_Entero_933W_NC_000924: hypothetical protein; FAT94_26460; phage(gi9632476)7.72e-16Showinfo_outline
6complement(5278480..5279247)PHAGE_Escher_vB_EcoM_ECO1230_10_NC_027995: conserved phage protein; FAT94_26465; phage(gi937533322)3.06e-82Showinfo_outline
7complement(5279244..5279900)PHAGE_Escher_HK639_NC_016158: adenine specific methyltransferase; FAT94_26470; phage(gi356870635)2.11e-144Showinfo_outline
8complement(5279897..5280055)PHAGE_Entero_933W_NC_000924: hypothetical protein; FAT94_26475; phage(gi9632478)3.57e-16Showinfo_outline
9complement(5280052..5280732)PHAGE_Entero_phi80_NC_021190: phage exonuclease; FAT94_26480; phage(gi824479613)1.08e-154Showinfo_outline
10complement(5280729..5281574)PHAGE_Ralsto_RSK1_NC_022915: putative phage recombination protein; FAT94_26485; phage(gi560186064)9.78e-81Showinfo_outline
11complement(5281590..5281874)PHAGE_Entero_phi80_NC_021190: host RecBCD/SbcCD enzymes inhibitor; FAT94_26490; phage(gi824479615)1.17e-19Showinfo_outline
12complement(5281963..5282157)hypothetical protein; FAT94_264950.0Showinfo_outline
13complement(5282257..5282472)PHAGE_Pseudo_PAJU2_NC_011373: hypothetical protein; FAT94_26500; phage(gi209552454)4.52e-15Showinfo_outline
14complement(5282823..5283512)PHAGE_Escher_HK639_NC_016158: cI; FAT94_26505; phage(gi356870650)3.30e-81Showinfo_outline
155283640..5283873PHAGE_Escher_HK639_NC_016158: cro; FAT94_26510; phage(gi356870651)5.15e-19Showinfo_outline
165283914..5284135PHAGE_Entero_mEp213_NC_019720: CII protein; FAT94_26515; phage(gi428782643)8.49e-10Showinfo_outline
175284360..5285259PHAGE_Cronob_ENT47670_NC_019927: replication protein; FAT94_26520; phage(gi431810506)1.04e-117Showinfo_outline
185285249..5286679PHAGE_Entero_HK022_NC_002166: gene P protein; FAT94_26525; phage(gi9634151)0.0Showinfo_outline
195286679..5286972PHAGE_Entero_933W_NC_000924: Ren protein; FAT94_26530; phage(gi9632496)1.03e-37Showinfo_outline
205286969..5287475PHAGE_Vibrio_pYD38_A_NC_021534: hypothetical protein; FAT94_26535; phage(gi514051016)1.35e-16Showinfo_outline
215287582..5288424PHAGE_Entero_UAB_Phi20_NC_031019: hypothetical protein; FAT94_26540; phage(gi100057)2.54e-33Showinfo_outline
225288597..5289244PHAGE_Entero_Tyrion_NC_031077: hypothetical protein; FAT94_26545; phage(gi100049)1.75e-15Showinfo_outline
235289244..5289492PHAGE_Stx2_c_1717_NC_011357: hypothetical protein; FAT94_26550; phage(gi209447155)1.01e-14Showinfo_outline
245289745..5290200PHAGE_Entero_phi80_NC_021190: PRK09741 superfamily protein; FAT94_26555; phage(gi824479629)6.77e-73Showinfo_outline
255290200..5290370PHAGE_Entero_phi80_NC_021190: NinE protein; FAT94_26560; phage(gi824479630)1.90e-19Showinfo_outline
265290363..5290998PHAGE_Entero_phi80_NC_021190: DNA junction-specific endonuclease Rap; FAT94_26565; phage(gi824479632)3.57e-113Showinfo_outline
275290995..5291132PHAGE_Phage_Gifsy_1_NC_010392: conserved hypothetical bacteriophage protein; FAT94_26570; phage(gi169257245)5.45e-07Showinfo_outline
285291125..5291655PHAGE_Entero_Tyrion_NC_031077: hypothetical protein; FAT94_26575; phage(gi100047)2.34e-37Showinfo_outline
295291652..5292341PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage antiterminator protein Q; FAT94_26580; phage(gi169257244)2.45e-93Showinfo_outline
305301261..5301272attR0.0Showinfo_outline
Klebsiella pneumoniae subsp
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Intact (score > 90)
Questionable (score 70-90)
Incomplete (score < 70)

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Length: 5628972 bps
Phages: 7
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Lysis
Terminase
Portal Protein
Protease
Coat Protein
Tail Shaft
Attachment Site
Integrase
Phage-like Protein
Hypotheical Protein
Other
Transposase
Fiber Protein
Plate Protein
tRNA

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