gi|00000000|ref|CP023893.1|  Raoultella ornithinolytica strain FDAARGOS_431 plasmid unnamed1, 231294, gc%: 52.40%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
22738..23718                       PHAGE_Bacill_BMBtpLA_NC_028748: IS5 transposase and trans-activator; CRN13_28095; phage(gi971482498)     0.0                 RaoultellaornithinolyticaMSHQLTFADSEFSTKRRQTRKEIFLSRMEQILPWQNMTAVIEPFYPKAGNGRRPYPLETMLRIHCMQHWYNLSDGAMEDALYEIASMRLFARLSLDSALPDRTTIMNFRHLLEQHQLARQLFKTINRWLAEAGVMMTQGTLVDATIIEAPSSTKNKEQQRDPEMHQTKKGNQWHFGMKAHIGVDAKSGLTHSLVTTAANEHDLNQLGNLLHGEEQFVSADAGYQGAPQREELAEVDVDWLIAERPGRVKTLKQHPRKNKTAINIEYMKASIRARVEHPFRIIKRQFGFVKARYRGLLKNDNQLAMLFTLANLFRVDQMIRQWERSQ
complement(23757..23873)           ABC transporter; CRN13_28100                                                         N/A                 RaoultellaornithinolyticaMLREGANKQVISSQADSLIKISRIWADFFPANTSNQPI
24052..24740                       PHAGE_Shigel_SfII_NC_021857: hypothetical protein; CRN13_28105; phage(gi526244690)     1.29e-64            RaoultellaornithinolyticaMKKRNFSAEFKRESAQLVVDQNYTVADAASAMDVGLSTMTRWVKQLRDERQGKTPKASPITPEQIEIRELRKKLQRIEMENEILKKATALLMSDSLNSSRSGNSGRVILWPLSAMCSGFIAAATNTGKTVLKSQTADGLYYAVRYLNCMASATALPEQEASPQWHPREATRWGAGLLADSKSWGWSVASSRLTGISVAVMSTLLSRIILSDSSPRNQIRCGAVMPAT
complement(24667..25104)           hypothetical protein; CRN13_28110                                                    N/A                 RaoultellaornithinolyticaMSKHLRPAVLTYHCQFLLHGLSDHVGRGDVFNPQRRINGFMFFSLSVLNLEDHLGLVISPQSPLSAGYITLRACRRSLPLRFSTVTPGGIVGFLIVSYRFNIPDRLAVHLSIHARPELRAHYRSHHRTTPDLVPLRRTVAQDDSG
25398..26921                       PHAGE_Pseudo_phi3_NC_030940: hypothetical protein; CRN13_28115; phage(gi100001)      2.25e-48            RaoultellaornithinolyticaMIISEMQRKLATWAATDPSLRIQRLLRLITQPEWLAEAARITLSSKGAHTPGVDGVNKTMLQARLAVELQILRDELLSGHYQPLPARRVYIPKSNGKLRPLGIPALRDRIVQRAMLMAMEPIWESDFHTLSYGFRPERSVHHAIRTVKLQLTDCGETRGRWVIEGDLSSYFDTVHHRLLMKAVRRRISDARFMTLLWKTIKAGHIDVGLFRAASEGVPQGGVISPLLSNIMLNEFDQYLHERYLSGKARKDRWYWNNSIQRGRSTAVRENWQWKPAVAYCRYADDFVLIVKGTKAQAEAIREECRGVLEGSLKLRLNMDKTKITHVNDGFIFLGHRIIRKRSRYGEMRVVSTIPQEKARNFAASLTALLSGNYSESKVDMAEQLNRKLKGWAMFYQFVDFKAKVFSYIDRVVFWKLAHWLARKYRTGIASLMRWWCKSPKPGQSKTWVLFGKTNHGKLSGEILYRLVGQGKKLFRWRLPEGNPYLRTETRNTYTSRFTEVAMAFASI
27002..27490                       PHAGE_Shigel_SfII_NC_021857: hypothetical protein; CRN13_28120; phage(gi526244689)     3.53e-42            RaoultellaornithinolyticaLTLLWTGKRWAYLAVVLDLFARKPVGWAMSFSPDSRLTMKALEMAWETRGKPVGVMFHSDQGSHYTSRQFRQLLWRYRFRQSMSRRGNCWDNSPMERFFRSLKNEWVPATGYVSFSDAAHAITDYIVGYYSALRPHEYNGGLPPNESENRYWKNSNAVASFC
28121..28861                       PHAGE_Brevib_Jenst_NC_028805: putative recombinase XerD; CRN13_28125; phage(gi971744895)     8.40e-06            RaoultellaornithinolyticaMNSIIPLQNSPERVSLLPIAPGVDFATAVALRRMATSTGATPAYLLAPEVSALLWYMPDQRHHMLFATMWNTGIRIGEARTLTPESFDLDGLRPFVRVLSEKVRARRGRPPKDEVRLVPLTDASFVRQMESWMVTTRPRRREPLWPVTDETMRNWLKQAVKRAEADGVHFSIPVTPHTFRHSYIMHMLYHRQPRKVIQALAGHKDPRSMEVYTRVFALDMAATLAVPFTGDGRDAAEILRSLPPAG
complement(29559..30569)           PHAGE_Salmon_SSU5_NC_018843: putative replication protein RepA; CRN13_28130; phage(gi410491479)     1.43e-115           RaoultellaornithinolyticaMTSENNSLLLNLQEVDKTTGEVVKLDVNSTSTVQPVALMRLGLFVPTLKSTGKSKANRKNVTDATEELVQLSIAKSEGYTDVKITGSRLDMDTDFKVWLGIIRSMSEYGVKSDTLELSFVEFVKMCGFDSRRSNKKMRDRISNSLFKLASVTLKFQSETKGWTTHLVQSAYYDINEDIVEIKAEPKLFELYHMDRRVLLRLKAIDALQRKESAQALYTYIESLPQNPAPISMKRMRDRLNLTSNVYTQNHTVRKAMEQLRDIGYLDYTEFKRGRATYFSVHYRNPKLISGPVKVPRKEEEEKAPEQNYDEVIKALKAAGIDPLKLAEALSAMKPEN
31320..32486                       PHAGE_Klebsi_phiKO2_NC_005857: plasmid partition protein SopA; CRN13_28135; phage(gi46402111)     0.0                 RaoultellaornithinolyticaMGLMDTLNQCISAGHEMTKAIAIAQFNDDSPEARKITRRWRIGEAADLVGVSSQAIRDAEKAGRLPHPDMETRGRVEQRVGYTIEQINHMRDVFGTRLRRAEDAFPPVIGVAAHKGGVYKTSVSVHLAQDLALKGLRVLLVEGNDPQGTASMYHGWVPDLHIHAEDTLLPFYLGEKDDASYAIKPTCWPGLDIIPSCLALHRIETELMGKFDEGKLPADPHLMLRLAIETVAHDYDVIVIDSAPNLGIGTINVVCAADVLIVPTPAELFDYTSALQFFDMLRDLLKNVDLKGFEPDVRILLTKYSNNNGSQSPWMEEQIRDAWGSMVLKNVVRETDEVGKGQIRMRTVFEQAIDQRSSTGAWRNALSIWEPVCNEIFDRLIKPRWEIR
32486..33457                       PHAGE_Yersin_PY54_NC_005069: partitioning protein SpyB; CRN13_28140; phage(gi33770536)     1.13e-113           RaoultellaornithinolyticaMKRAPVIPRHTTHTQSTEDTSSPAPAAPMVDSLIARVGAMARGNAISLPVCGREVKFTLEVLRGDTVESASRVWSGNERDQELLTEDALDDLIPSFLLTGQQTPAFGRRVSDVIEIADGSRRRKAAILTESDYRVLVGELDDEQMAALSRLGNDYRPTSAYERGLRYTSRLQNEFAGNISALADAENISRKIITRCINTAKLPKSVVALFAHPGELSARSGEALQKAFADKEELLKQQAETLHDQKKAGLIFEAEEVISLLTSVLKQSPASRVNLSSRHQFAPGATALYKGDKMVLNLDKSRIPAECIEKIEAILKELEKPGV

#### region 2 ####
complement(35429..36700)           PHAGE_Cronob_ENT39118_NC_019934: DNA polymerase; CRN13_28165; phage(gi431811050)     0.0                 RaoultellaornithinolyticaMFALADVNSFYASCERVFRPDLRGKPVVVLSNNDGCVIARSAEAKRLGIKMGTPWFQLKEAQFPEKLYVFSSNYELYASLSNRVVALLEELSPRVEQYSIDECFLDARGIGQCMDLEDFGRQLRGHVLSGTGLTIGVGCGATKTLAKSAQWASKEWPQFRGVLALSPDNPRRTAKLLSLQPVEEIWGVGNRIAKKLHVMGITTALQLSLTNPAFIRKNFNVVLERTVRELNGESCISLEEAPPPKQQIVCSRSFGQRITTYEEMRQAVCQYAERAAEKLRGERQYCRHISIFIKTSPFAVNEPYYGNVATEKLNTPTRDTRDIIAAAVRSLDRIWLDGHRYAKAGIMLNDFSPNGVAQLNLFDDVQPRPHSDALMKVLDGINHSGLGKVWFAGRGIAPDWQMKREMLSPAYTTRWKELPVARF
complement(36700..37125)           PHAGE_Cronob_ENT39118_NC_019934: protein umuD; CRN13_28170; phage(gi431811072)       3.67e-31            RaoultellaornithinolyticaMKFIPAVSEASIVKIPLFTERCPAGFPSPAADYTESELDLNEYCIHRRHSTYFVRAIGNSMTDIGLYSGDLMVVDKAEQPRHGDIVIAEIEGEFTVKRLLLTPRPALQAMNPDFPSLYPDPETLQIFGVVTAFIHKTRGTD
37280..37531                       hypothetical protein; CRN13_28175                                                    N/A                 RaoultellaornithinolyticaMTGVLTGQPLSHEIYIKLPGADVVLLTEGNIIGCDTASATWTRRGLRPWHVNTISTREPGDLPSDHLPVSGMARTGKTRSHSR
37531..39015                       PHAGE_Pseudo_phi3_NC_030940: hypothetical protein; CRN13_28180; phage(gi100001)      2.08e-36            RaoultellaornithinolyticaMYGEEKSDSLIVAAKQANNPKGAESVERRSGAKGNAEQPHMRRTQSRESMSQRLSRVREAAKQRKKERFTALFHLLTVEALEAAFLSLSRKAAAGVDGIRWMDYAGNMKNNITDLHRRLHQGSYRAQPGRRHYIPKADGKQRPLGIASLEDKIVQYALVKILNAVYENDFMGFSYGFRPGRSQHDALDALATGLVRTNVNWVLDADISQFFDRVSHEWLIRFTEHRIGDRRVIRLIRKWLTAGTSEEGQWRATEEGTPQGAVISPLLANIYLHYVFDLWAHQWRRRYATGNVVMVRYADDIVIGFDKRYDARRFRIAMQRRLREFGLTVHPEKTRLMEFGRFAAENRAIRGKGKPETFNFLGFTHISGKDRNGRFMLIRKTRRDRMTATLKAIKDGLRRRWHYSIPEQGKWLRRVVQGYLNYHSVPGNFPTMQKFRTHVTNLWRRALRRRSQKDDTTWTKANRLAAAWLPGVRVLHPWPVERFTARHPRQEPGA
39264..40235                       PHAGE_Entero_P88_NC_026014: recombinase; CRN13_28185; phage(gi744692717)             4.25e-77            RaoultellaornithinolyticaMNIYCDDGSTNVKLAWFEGDELQTRVSANSFRHGWKVAEFSAATFNYQVGTLKYTWDSVSRDAIPTTNVEYQYGDLNLLAVHHALLNSGLEPQPVSLTVTLPLSEYYDGDCQRNEENIRRKRENLMRELVLNKGRAFTVTDVKVMPESLPAAFSRLAELKPGPAETTLIIDLGGTTLDAGVIVGQFDDISAVHGNPSVGVSQVTRAAAGALRAADSETSALIADTVIRNRNDRQYLQRVINDAGKIDEVRNKITEAITSLGARVTSELTAFRNVNRVFLVGGGASLIEEAIRQAWPLAPDRIEVIGDPQMALAREIALYNKED
40238..40909                       Mediator of plasmid stability; CRN13_28190                                           N/A                 RaoultellaornithinolyticaMPDGQYSFYLHSDDRTDIAAMATISTISQPLRGEFIRTAATAGAVVYQVDARLPALIPVFFAGQLSAVRLCAVMALVSGTWSSLTGLPDEPENGGAALPVSPETEYQRRRYTLTLQNGRSGERVESVLTEASSRLRGDLLRNLIITGLALHTTAPELPRLLASMPVPPTSVSELQALVQQMAGTADVNRAAAAVPDTPAAPAAPVSGADTREIKKNMRRAFGD
40972..41202                       hypothetical protein; CRN13_28195                                                    N/A                 RaoultellaornithinolyticaMSPGFRNVLRLARIPVDSSEPVRRKFGSRLIGIVTVCLLPLLVFDVPQWVFILSQVIWGAGVYIGLSLAGDKSLNR
41365..41567                       hypothetical protein; CRN13_28200                                                    N/A                 RaoultellaornithinolyticaARCQCLASGLVRDGRFFRSGPASLRVCASPSPFGTPFKPLSRHILAVQKTDGCGIPRSAPVTGRDGA
41639..42340                       PHAGE_Staphy_Stau2_NC_030933: hypothetical protein; CRN13_28205; phage(gi100063)     3.58e-27            RaoultellaornithinolyticaMSRFILGNCIDVMRGFPDRAVDLIVTDPPYLVGFKDRQGRQIAGDVTDEWLQPATLEMYRVLKKDALMVSFYGWNRVDRFMAAWKAAGFYAVGQLVFTKNYASNRRNARARRGFVDYCHEGAYVLAKGRPVPPLKPLPDVLPFPYTGNTLHPTQKPVEALQPLIESFSAPGAIVLDPFAGSGSTCVAAYRAGRRYIGIEMLAQYHRAGTERLAAMHRAVNTPAANDEWLPEAA
42340..42561                       PHAGE_Entero_N15_NC_001901: gp50; CRN13_28210; phage(gi9630517)                      6.40e-06            RaoultellaornithinolyticaMNYDGHEALRRDMAGLANNLCDLKTTLKVLEDTYHYRYDGLAERLAGISLRRLSVLMDEAFNIALMLDESFLD
42571..42990                       DUF1380 domain-containing protein; CRN13_28215                                       N/A                 RaoultellaornithinolyticaMYGTREDLCRMLNEQYPAETPLNLIIWTPADIEALADGMEYSFSEHDVRAVLERMDTIPEEQRLESGVSAGLVMALIDQVKENGQRVTVPVDLLETLLITAEQALWDREWTARDRNLPVPESVMRRLADTAKVRALLKS
43044..43811                       hypothetical protein; CRN13_28220                                                    N/A                 RaoultellaornithinolyticaMMKKETLNTLILRHGDRMLRQAGWPDTVDMAPVAPETVPGWLAACGSLSGVEILTLTEQLCQPLTYGRAALLLASARRLAGTPARLHLFPVQAYPHPERLADCQVIRLPYAQEWLTAAECDDLLAFLKASLTQISEIVHRDTKRIAAALTPSVTPRLMDRRIGDWRLLAVEYDHDNCLDEDETDRLDQVLDAILIRDARFCPVLLTLVNEREETIRSAGVIADQLRFTDTPVRRWLDRRVLREMVREARASRTQE
44492..44920                       PHAGE_Pseudo_YuA_NC_010116: hypothetical protein; CRN13_28225; phage(gi162135127)     1.06e-13            RaoultellaornithinolyticaMQYVNTCPVLNVEESDRLSFMPYLFGTDFMLAELQVYALAKKWMPEYEGGFWHFIRLPEGGGYMMPDCGRVHLVSSENWFDRTVSADAAGIILTSLAINRRLAAHHDSSNPALTRLYMLRDAQLWNHITFHPECSAIYAALD
44963..45469                       PHAGE_Rhodoc_CosmicSans_NC_028677: ArdA; CRN13_28230; phage(gi966199624)             7.22e-13            RaoultellaornithinolyticaMTSSVTVPAVYVGTYHQYNGGSIFGKWFDLTDFDDEDEFYDACRALHAAEDDPEFMFQDWEGIPSQFASESSVKWAFIEAFRQAQDEGRAAAFVAWAGYTGECDYDAFDEAYCGEAESEEDFAYGFVEDHGLLNEVPESLRVYFDYEAYARDLFSSGYVFHEGYVFSN
