gi|00000000|ref|UGAU01000003.1| Escherichia coli strain NCTC11111 genome assembly, contig: 4980200, gc%: 50.41% CDS_POSITION BLAST_HIT EVALUE prophage_PRO_SEQ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- #### region 1 #### complement(88733..90841) PHAGE_Bacill_vB_BanS_Tsamsa_NC_023007: hypothetical protein; NCTC11111_00211; phage(gi564292599) 1.54e-19 EscherichiacoliMYLFESLNQLIQTYLPEDQIKRLRQAYLVARDAHEGQTRSSGEPYITHPVAVACILAEMKLDYETLMAALLHDVIEDTPATYQDMEQLFGKSVAELVEGVSKLDKLKFRDKKEAQAENFRKMIMAMVQDIRVILIKLADRTHNMRTLGSLRPDKRRRIARETLEIYSPLAHRLGIHHIKTELEELGFEALYPNRYRVIKEVVKAARGNRKEMIQKILSEIEGRLQEAGIPCRVSGREKHLYSIYCKMVLKEQRFHSIMDIYAFRVIVNDSDTCYRVLGQMHSLYKPRPGRVKDYIAIPKANGYQSLHTSMIGPHGVPVEVQIRTEDMDQMAEMGVAAHWAYKEHGETSTTAQIRAQRWMQSLLELQQSAGSSFEFIESVKSDLFPDEIYVFTPEGRIVELPAGATPVDFAYAVHTDIGHACVGARVDRQPYPLSQPLTSGQTVEIITAPGARPNAAWLNFVVSSKARAKIRQLLKNLKRDDSVSLGRRLLNHALGGSRKLNEIPQENIQRELDRMKLATLDDLLAEIGLGNAMSVVVAKNLQHGDASIPPATQSHGHLPIKGADGVLITFAKCCRPIPGDPIIAHVSPGKGLVIHHESCRNIRGYQKEPEKFMAVEWDKETAQEFITEIKVEMFNHQGALANLTAAINTTTSNIQSLNTEEKDGRVYSAFIRLTARDRVHLANIMRKIRVMPDVIKVTRNRN complement(90860..91135) RNA polymerase omega subunit; NCTC11111_00212 N/A EscherichiacoliMARVTVQDAVEKIGNRFDLVLVAARRARQMQVGGKDPLVPEENDKTTVIALREIEEGLINNQILDVRERQEQQEQEAAELQAVTAIAEGRR complement(91190..91813) PHAGE_Bacill_vB_BanS_Tsamsa_NC_023007: hypothetical protein; NCTC11111_00213; phage(gi564292623) 4.00e-18 EscherichiacoliMAQGTLYIVSAPSGAGKSSLIQALLKTQPLYDTQVSVSHTTRQPRPGEVHGEHYFFVNHDEFKEMISRDAFLEHAEVFGNYYGTSREAIEQVLATGVDVFLDIDWQGAQQIRQKMPHARSIFILPPSKIELDRRLRGRGQDSEEVIAKRMAQAVAEMSHYAEYDYLIVNDDFDTALTDLKTIIRAERLRMSRQKQRHDALISKLLAD 91782..91796 attL N/A GCAGAAACAATATAA 92071..93753 PHAGE_Vibrio_pTD1_NC_041916: hypothetical protein; NCTC11111_00214; phage(gi100038) 3.98e-24 EscherichiacoliMKVWMAILISILCWQSSVWAVCPAWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFGSEPRDVMMPPLNGAVMHPVAHTGVRKMVDKNALSLWMRERSDLWVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGEIFLQREGHIQQQMGGINARAKVAGLMMRQGNSDTLNSLAVFVWAWPDGPQLMTDRLKELDTAGFTLTQRYTRAVKNADEVARVRNEWWKAKLPFVTDGVVVRAAKEPESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLNDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTPPENRFNSLTCYFASDVCQEQFISRLVWLGSKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNQARKQPFTRWVMAMGIPLTRAALNASDERSWSQLLVSTEQFWQQLPGTGAGRARQVIEWKENAQIKKLGSWLAAQQITGFEP complement(93750..94367) inner membrane protein; NCTC11111_00215 N/A EscherichiacoliMLLHILYLVGITAEAMTGALAAGRRRMDTFGVIIIATATAIGGGSVRDILLGHYPLGWVKHPEYVIIVATAAVLTTIVAPVMPYLRKVFLVLDALGLVVFSIIGAQVALDMGHGPIIAVVAAVTTGVFGGVLRDMFCKRIPLVFQKELYAGVSFASAVLYIALQHYVSNHDVVIISTLVFGFFARLLALRLKLGLPVFYYSHEGH complement(94658..94891) PHAGE_Riemer_RAP44_NC_019490: DNA-damage-inducible protein D; NCTC11111_00216; phage(gi418489887) 7.40e-14 EscherichiacoliMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGSKVRQTIQELGGTMPEELPTPQVSIKQLENSVKITEKK complement(94955..96085) PHAGE_Geobac_E3_NC_029073: transposase; NCTC11111_00217; phage(gi985758480) 7.19e-79 EscherichiacoliMRFAYNKALHIKKQAYQRHGVSLSPRKDLKPLLAVAKKSRKYTWLKEYDSIALQQAVINLDVAFSNFFNPKLRACFPSFKSKHGKQSSYHCVGVKVLEGAIKIPKIAPIEASLHREITGTLKNITLSRSATGKYYASILCDDGAETPAKPTLISVVTGLDMGLSHYAIKSNGVKIPNPRYLINASRNLRRKQKSLSRKKKGSANRRKARIQLAGVHERVTNTRADFQHKLSRTIVDENQAVIVETLKAANMMKNHHLARAIGDAGWAGFITKLEYKAAEEGVHLVKLDQWFASSKTCHCCGHKMPEMPLNKRIWQCPECGVEHDRDINAAINIERKGILELQAAGLVVSAHGGQRKSVPQTVAAQEVGSLARQGGE complement(96235..96660) PHAGE_Gordon_Attis_NC_041883: RNA polymerase binding protein; NCTC11111_00218; phage(gi100043) 1.86e-11 EscherichiacoliMNEHHQPFEEIKLINANGAEQWSARQLGKLLGYAEYRHFIPVLTRAKEACLNSGHTIDDHFEEILDMVKIGSNAKRALMHMVWLPVHLNNLTFEFSGCRIKSIPQLFNHSSVKQFSAVFCRNNQMHNKLTDTMPLTEESLQ 96818..97009 Uncharacterised protein; NCTC11111_00219 N/A EscherichiacoliMPLCLSGGICEGGKVRIGVTSYSMLNLFVEYWLQCRIVAGFLLMRFLIMYTLMYTVFSGAINH 97191..98204 PHAGE_Clostr_c_st_NC_007581: hypothetical protein; NCTC11111_00220; phage(gi80159838) 3.80e-13 EscherichiacoliMAKDLTTSAHDRQNILNNSYALRHAEKHLALGGVEFDGERVFTKNQLVDLFDVSDATIERYIANNLDELKNNGYIILRGKNLKEFKEVADGALINEGTKTSVLGVFKFRAVLNLAMLLVESEQAKIIRTRLLDIVIDTLAERAGGHTKFINQRDEDYLVASFKEESYRKQFTDALNEYVDANGWKFGKLTNAIYQSIFHENANEYRSVLKLHQHDKIRDTMYSEVLTLIASFEAGLAHEIKQKSLQIGRKLTYKEAEAILTTMEKHPLYEPMLVDVRTKMASRDLCFRDALHEKLEAYVRAVPEGDFERFLGEKSKSLEERLNDPETLEVFKRLKDR 98213..98674 PHAGE_Gordon_Bantam_NC_031074: hypothetical protein; NCTC11111_00221; phage(gi100132) 1.59e-08 EscherichiacoliMDDIQFNYFDIEHAIRVHDWIIEKTGGLHGIRDQGVLESALEHIQNDWYYPGFVDKLSHLFFAINKFHAFSDGNKRSSIALSTYFLEINGFGHCVQLFVREMENIAVWVADGAIDKELLKNIIHDLVLCEEILETTKLEITIAVMNYETLRHG complement(98977..99087) Uncharacterised protein; NCTC11111_00222 N/A EscherichiacoliMLSLFLQITPHFEGIGAIKMVLGTFLKLRIVEKPMG complement(99087..99374) PHAGE_Entero_SfV_NC_003444: hypothetical protein; NCTC11111_00223; phage(gi19549027) 5.40e-05 EscherichiacoliMIRDRKAEELESKGLCRRAAARWTEVLTLADGDKEREHAANRRSECIRRAARPPATIDRFGDLRQAVKRTHSALGMDEEARGYFRRYRDKDCQRQ complement(99606..99797) putative prophage protein; NCTC11111_00224 N/A EscherichiacoliMTPREIELLTIAKLEHDGHQLSPAELRELRRQLAEGPVIARRYREMMTSPAYRWSKPAPLRAR 100050..100235 PHAGE_Stenot_S1_NC_011589: putative repressor protein; NCTC11111_00225; phage(gi213163928) 7.16e-09 EscherichiacoliMRLIKLSEVMLRTGFKKTAIYSWVKTGTFPQPVKIGRSARWSLEEVEAWIQNKLDSRAGNQ complement(100814..102040) PHAGE_Bacter_APSE_2_NC_011551: injection gp20; NCTC11111_00226; phage(gi212499730) 2.14e-130 EscherichiacoliMATWQLGGLPSMAPQNDNAPRSSVPQPVQYQQQPNVGLMALQGLRGVAEINQQARQQQRKAEFQKAYAGAFESGDRNKMRSLISEYPEEFESVQKGMGFIDDDQRNSIGHLATSAQIASSLGTGAFGKFIADNEDEMRRLGISPESVAEMHVNDPQEFQRLAGSMALFSLGHEKYFDIKDRMEGRDIERGKLAETIRSNQAGEALQARGQDISRANALTSAYAPTAAMQNYNQYAQMLKADPEGAAAFAAAAGINTNAKKLMSVRENDDGTVTKYYTDGSEEQGKLNQPISGDGFRPIALPTAQKIMEKSPEGAKKAAGFAYRVRDALDSMDTLKGQLSPQRVAIINNALGNGTLANLTLSPTEQQYVVNANDAIMAILRQETPITCIWCDKSRYMTSHVVLVVITTF complement(102040..102717) PHAGE_Bacter_APSE_2_NC_011551: injection gp7; NCTC11111_00227; phage(gi212499729) 1.80e-64 EscherichiacoliMLITHIAHKYLNRAVYEKGGDGGASKAQAKAQQQAIDLQREQWNTVMNNLKPYAEVGLPALQQLQGLMTLEGQNKAANDFFGSGLYKTQADQARYQNLVSAEATGGLGTTATSNQLSSIAPMLYNNWLSGQMQNYGNLLNVGMNAASGQATAGQNYANNTGQLLQGLGAIRAGQAQQPSSLARGIGGAASGALAGAQLGSVVPGIGNVAGAIGGGLIGLVGGLGF complement(102711..103172) PHAGE_Bacter_APSE_2_NC_011551: hypothetical protein; NCTC11111_00228; phage(gi212499728) 4.93e-31 EscherichiacoliMELKFIDNPVRLQAFLNEPGNTENIVEPGHTYYIKPDAVYLGIYEGLVLAGVHEVRNFWHSIVECHAVYDPGFRGEYALQGHRLFCKWLLENSPFLNSITMVPDTTKYGRAIIRLLGATRVGHLDDAYIRCGKPVGVTLYQLTRQQYKEFSEC complement(104209..104391) putative prophage protein; NCTC11111_00231 N/A EscherichiacoliMFKPTGTPQPQKRYKDAHGALVTVESVSHNRVTFYRDGYQSPCVQPLARFMKEFAEVNKC complement(104384..105217) PHAGE_Escher_TL_2011c_NC_019442: putative antirepressor; NCTC11111_00232; phage(gi418487055) 2.42e-28 EscherichiacoliMNIEKSRLISEAAPHLNASLGTINGNEFAAIVPVIPGHIGGRETNIVSAKALHKALGVGKDFSTWITDRISEYDFTIGHDYSVHKTISPNLGKSPNGAAYSKIKQSGRPGKDYLLSVGMAKELAMIERNDQGRAIRRYFIQCEEELQRSVPEIAARYRRQLKARISAANNFKPMCDALNMARAEQGKTTQQHHYTNESNMISRIVLGGLTAKQWARINGYSGEPRDHMNAEQLEHLSYLESTNITLIDMGMEYEQRKGELTRLSQRWLAKRLEAVHV complement(105230..105661) putative prophage protein; NCTC11111_00233 N/A EscherichiacoliMEKKNRPLQAANSDTRVSDVTPLTKSLQAPKRTPKKHRARVYMLRTGIEGWTENDILRYCRLSSGRNYATELERQLGITLERIDEKNPDGIGTHLRYRFSCRGDVLKVITHINHLANINDHNGLSQQEIADILKLYPDAFNAA complement(105661..105864) putative prophage regulatory protein; NCTC11111_00234 N/A EscherichiacoliMNTDTIPTKGYIRRFRLAELLGVSVSTIDRKVRNGSLPRPVKLGEKITAFDAVEIHNWLAERRGKVA complement(105977..106822) putative prophage protein; NCTC11111_00235 N/A EscherichiacoliMKKLPPNLFFRLNRAANLLEIEVDDLLLMGVSGSIFLSTIIHQYEGVLYQAGNLPPDHGSKDIENLLFGSIISTREDTERYLNEGVFDGMKCLASGLWHVPSDFIASLAGVKRAPDIPLIFSPAYIKKELDITSGRYFFYDFREHDTTVSSVEDLYISRPWVEYIAESMDKNQPIPSILHLGSHDLYEKEFKNIEHGNRARHSLNRENSIMALIYVKRHYPEECKGKNGKETNEAWANATIDHWPHVGGDYDEPSTDYLKKIISDMDRLPEKRTTAGKKKS complement(106918..108177) PHAGE_Burkho_BcepC6B_NC_005887: putative integrase protein; NCTC11111_00236; phage(gi48697215) 1.14e-51 EscherichiacoliMPKLTDMQIRAWIKAGDRFDGKADGNGLYICYPKNYTVPFWRFRYKLAGKQRAMVIGSYSELSLSKARETAKELSARVALGYDVAAEKQERKAEALAKMEAEKNAMRVSDLAAEYFERQILPRWKHPDILRRRIDKDINPCIGHMKVEDVKPRHIDDMLKGIVDRGAPTIATDVLRWTRRIFDYGIKRHALEINPCSAFEVSDAGGKEVSRDRWLTRDELIRLFEAMRTAKGFSRQNELTFKLLLALCVRKMELCAARWEEFDLDGAVWHLPEERSKNGDPIDIPLPSPAVEWLRELHTFSCNSAWVLPARKMQNRMIPHIQESTLPVALAKVRAEIPDVPNFTIHDFRRTARTHLAALGVDPVVAERCLNHRIKGVEGIYNRHQYFDERKAALAQWADLLVALESGKDHNVTPLRRAN complement(108366..109229) putative alpha helix protein; NCTC11111_00237 N/A EscherichiacoliMIRSMTAYARREIKGEWGSATWEMRSVNQRYLETYFRLPEQFRSLEPVVRERIRSRLTRGKVECTLRYEPDVSAQGELILNEKLAKQLVTAANWVKMQSDEGEINPVDILRWPGVMAAQEQDLDAIAAEILAALDGTLDDFIVARETEGQALKALIEQRLEGVTAEVVKVRAHMPEILQWQRERLVAKLEDAQVQLENNRLEQELVLLAQRIDVAEELDRLEAHVKETYNILKKKEAVGRRLDFMMQEFNRESNTLASKSINAEVTNSAIELKVLIEQMREQIQNIE 109356..110072 ribonuclease PH; NCTC11111_00238 N/A EscherichiacoliMRPAGRSNNQVRPVTLTRNYTKHAEGSVLVEFGDTKVLCTASIEEGVPRFLKGQGQGWITAEYGMLPRSTHTRNAREAAKGKQGGRTMEIQRLIARALRAAVDLKALGEFTITLDCDVLQADGGTRTASITGACVALADALQKLVENGKLKTNPMKGMVAAVSVGIVNGEAICDLEYVEDSAAETDMNVVMTEDGRIIEVQGTAEGEPFTHEELLTLLALARGGIESIVATQKAALAN 110138..110779 PHAGE_Prochl_P_SSM2_NC_006883: orotate phosphoribosyltransferase; NCTC11111_00239; phage(gi61805915) 4.19e-05 EscherichiacoliMKPYQRQFIEFALSKQVLKFGEFTLKSGRKSPYFFNAGLFNTGRDLALLGRFYAEALVDSGIEFDLLFGPAYKGIPIATTTAVALAEHHDLDLPYCFNRKEAKDHGEGGNLVGSALQGRVMLVDDVITAGTAIRESMEIIQANGATLAGVLISLDRQERGRGEISAIQEVERDYNCKVISIITLKDLIAYLEEKPEMAEHLAAVKAYREEFGV 111077..112036 PHAGE_Escher_pro147_NC_028896: RNA-directed DNA polymerase; NCTC11111_00240; phage(gi971753749) 5.60e-18 EscherichiacoliMDATRITLLALDLFGSPGWSADKEIQRLYALSNHAGRHYRRIILSKRHGGQRLVLAPDYLLKTVQRNILKNVLSQFPLSPFATAYRPGCPIVSNAQPHCQQPQILKLDIENFFDSISWLQVWRVFRQAQLPRNVVTMLTWICCYNDALPQGAPTSPAISNLVMRCFDERIGEWCQARGITYTRYCDDMTFSGHFNARQVKNKVCGLLAELGLSLNQRKSCLIAACKRQQVTGIVVNHKPQLAREARRALRQEVHLCQKYGVISHLSHRGELDPSGDLHAQATAYLYALQGRINWLLQINPEDEAFQQARESVKRMLVAG 123974..123988 attR N/A GCAGAAACAATATAA #### region 2 #### 1230637..1230650 attL N/A AATCAGCGAATAAA 1233038..1237075 PHAGE_Gordon_Eyre_NC_031122: hypothetical protein; NCTC11111_01360; phage(gi100057) 4.51e-06 EscherichiacoliMQGSLAANTTINGGRQYVEQSTVETTTIKNGGEQRVYESRALDTTIEGGTQSLNSKSTAKNTQIYSGGTQIIDNTSSSDVIEVYSGGVLDVRGGTATNITQHDGAALKVTTYDLTVSGTNSEGAFSIHNKVADNVLLENGGHLEVSHSANKTIIKDKGTMSVLTNAKADATRIDNGGVMDVAGNATNTIINGGTQNINNYGIATGTNINSGTQNIKSGGKADTTIISSGSRQVVEKDGTAIGSNISAGGSLIVYTGGIAHGVNQETGSALVANTGAGTDIEGYNKLSHFTITGGEANYVVLENTGELTVVAKTSAKNTTIDAGGKLIVQKEAKTDSTRLNNGGVLEVQDGGEAKHVEQQSGGALIASTTSGTLIEGTNSYGDAFYIRNSEAKNVVLENAGSLTVVTGSRAVDTIINVNGKMDVYGKDVGTVLNSAGTQTIYASATSDKANIKGGKQTVYGLATEANIESGEQIVDGGSTEKTHINGGTQTVQNYGKAINTDIVSGLQQIMANGVAEGSIINGGSQVINEGGLAENSVLNDGGTLDVREKGSATGIQQSSQGALVATTRATRVTGTRADGVAFSIEQGAANNILLANGGVLTVESDTTSAKTQVNTGGREIVKTKATAAGTTLTGGEQIVEGVANETTINDGGIQTVSANGEAIKTTINEGGTLTVNDNGKATDIVQSSGAALQTSTANGIEISGTHQYGTFSIAGNLATNMLLENGGNLLVLAGTEARDSTVGNGGAMQNLGQDSATKVNSGGQYTLGRSKDEFQALARAEDLQVAGGTAIVYAGTLADASVSGATGSLSLMTPRDNVTPVKLEGAIRITDSATLTIGNGVDTTLADLTAASRGNVWLNSNNSCAGTSNCEYRVNSLLLNDGDVYLSAPATTNSIYNTLTTNELSGSGNFYLHTNVAGSRGDQLVVNNNATGNFKIFVQDTGVSPQSDDAMTLVKTGGGDASFTLGNTGGFVDLGTYEYVLKSDGNSNWNLTNDVKPNPDPNPNPKPDPKPDPKPDPNPKPDPNPKPDPTPDPTPTPVPEKRITPSTAAVLNMAATLPLVFDAELNSIRERLNIMKASPHNNNVWGATYNTRNNVTTDAGAGFEQTLTGMTVGIDSRNDIPEGIATLGAFMGYSHSHIGFDRGGHGSVGSYSLGGYASWEHESGFYLDGIVKLNRFESNVAGKMSSGGAANGSYRSNGLGGHIETGMRFTDGNWNLTPYASLTGFTADNPEYHLSNGMESKSVDTCSIYRELGATLSYNMRLGNGMEVEPWLKAAARKEFVDDNRVKVNNDGNFVNDLSGRRGIYQAGIKASFSSTLSGHLGVGYSNGADVESPWNAVAGVNWSF complement(1237746..1239389) PHAGE_Entero_P4_NC_001609: DNA primase; NCTC11111_01361; phage(gi9627512) 0.0 EscherichiacoliMVALSSVNLLSLASLARQKHPACQIVLAADRDLSGDGQKKAAAAADACEGVVALPPVFGDWNDAFTQYGGEATRKAISDAIRPPAESPFDTMSEAEFSAMSTSEKAMRIYEHYGEALAVDANGQLLSRYENGVWKVLPPQDFARDVAGLFQRLRAPFSSGKVASVVDTLKLIIPQQEAPSRRLIGFRNGVLDTQNGTFHPHSPSHWMRTLCDVDFTPPVEGETLETHAPAFWRWLDRAAGGRAEKRDVILAALFMVLANRYDWQLFLEVTGPGGSGKSIMAEIATLLAGEDNATSATIETLESPRERAALTGFSLIRLPDQEKWSGDGAGLKAITGGDAVSVDPKYRDAYSTHIPAVILAVNNNPMRFTDRSGGVSRRRVIIHFPEQIAPQERDPQLKDKITRELAVIVRHLMQKFSDPMLARSLLQSQQNSDEALNIKRDADPTFDFIGYLETLPQTSGMYMGNASIIPRNYRKYLYHAYLAYMEANGYRNVLSLKMFGLGLPVMLKEYGLNYEKRHTKQGIQTNLTLKEESYGDWLPKCDDPATT complement(1239443..1239703) PHAGE_Entero_P4_NC_001609: hypothetical protein; NCTC11111_01362; phage(gi9627514) 2.10e-56 EscherichiacoliMFDFPQPGEIYRSAGFPDVAVVGILEDGIPWEMPYRCPDIVWNPYRRKFSILVRILADGRTTDIPLGRFLREFTCDRPDLFRRSPV complement(1239696..1239983) PHAGE_Entero_P4_NC_001609: helper derepression protein; NCTC11111_01363; phage(gi9627515) 6.92e-65 EscherichiacoliMRNKKAPQTVSARHDAREHLSIEAYHKLNRASAVSQFVGGDLIHRELSGLHQLYIPHIFSYLNEDIDFVLNELKAKGLCRDFLAQQKDRGDRTHV complement(1240572..1240838) PHAGE_Entero_P4_NC_001609: transcriptional regulator; NCTC11111_01366; phage(gi9627517) 1.12e-59 EscherichiacoliMQAVFSSPSPAPVTPLMPLPDITQERFLRLPEVMHLCGLSRSTIYELIRKGEFPPQVSLGGKNVAWLHSEVTAWMAGRIAGRKRGYDA 1241390..1242124 PHAGE_Entero_P4_NC_001609: head size determination protein sid; NCTC11111_01367; phage(gi9627518) 1.83e-177 EscherichiacoliMSDNTIPEYLQPALAQLEKARAAHLENARLMDETVTAIERAEQEKNALTQADGNDADDWRTAFRAAGGVLSDELKQRHIERVARRELVQEYDNLAVVLNFERERLKGACDSTATAYRKAHHHLLSLYAEHELEHALNETCEALVRAMHLSILVQENPLANTTGHQGYVAPDKAVMQQVKSSLEQKIKQMQISLSGEPVLRLTGLSAATLPHMDYEVAGTPAQRKVWQDKIDQQGAELKARGLLS 1242121..1242621 PHAGE_Entero_P4_NC_001609: transactivation protein; NCTC11111_01368; phage(gi9627519) 5.23e-118 EscherichiacoliMIYCPSCGHVAHTRRAHFMDDGTKIMIAQCRNIYCSATFEASESFFSDSKDSGMEYISGKQRYRDSLTSASGSMKRQKRMLVTGYCCRRCKGLALSRTSRRLSQEVTERFYVCTDPGCGLVFKTLQTINRFIVRPVTPDELAERLHEKQELPPVRLKTQSYSLRLE 1242695..1243267 PHAGE_Entero_P4_NC_001609: amber mutation-suppressing protein; NCTC11111_01369; phage(gi9627520) 3.05e-136 EscherichiacoliMESTALQQAFDTCQNNKAAWLQRKNELAAAEQEYLRLLSGEGRNVSRLDELRNIIEVRKWQVNQAAGRYIRSHEAVQHISIRDRLNDFMQQHGTVLAAALAPELMGYSELTAIARNCAIQRATDALREALLSWLAKGEKINYSAQDSDILTTIGFRPDAASVDDSREKFTPAQNMIFSRKSAQLASHQSV complement(1243466..1245103) Uncharacterised protein; NCTC11111_01370 N/A EscherichiacoliMNTYKQTIKQKSRLNIWETAIARLTTQAESSRILESNYLTNLIDFCWKDTLNQVAIYDESIVLRNGYNWVQKISDSYKPKAASELKIAFFCGPEPENDLDILLSLDVRIENIWAFEIDNNSYNTALQKAKEFYPKLKIFPGSIGEFFKTTHHTFDIIYLDFTSSLLTKKSPPLGVINSVFDNQALSDLGVLIVNSCEPDANEDNATFLASYFMNHEIIESSVINKTNDDDYDDNYDYFSLFIESPTSQGYDDIKSLAKVIKTNISGAYSAFSTSYVMHYASMISPTLRFLQNNSLKRQLFNDKKAEVTATFAEIGSTDFFKTLISTDGEASSPSILGNRFLDNESYPFWNFIDSLNGSGTSISSYFKSFFTTAKEGVSILNAVQFRESFHSMLTGARKLLSQRMLNAIPQIIKAIPDARGGLFCDIPLPHLWLEVALNQLGAPYHVNVKMHNRWKYKAKTRTMHTDLFVFDRCRGFYDSMPMIDQYETILTNIEEQIFARCCIDIIGKQCRWPTPKLYFGSNLIGINESDWSEFAELREREIIKE complement(1245100..1246305) PHAGE_Entero_P4_NC_001609: integrase; NCTC11111_01371; phage(gi9627511) 4.39e-78 EscherichiacoliMARTTRPLTNTEVLRAKALEKDLTLHDGDGLFLLIKTNGKKLWRFRYQRPATKQRTMMGLGAFPALSLADARRLRADYLALLANGIDPQVQAEFIEEQQQIALDSIFSTVATNWFQIKSKSVSPDYAKDIWRSLEKDIFPAIGEIPVQQIKARTLVEALEPIKARGALETVRRLIQRINEIMIYAVNTGLIDANPASGVGMAFEKPKKQNMPTLRPEELPKLMRSLAMSNLSVSTRCLIEWQLLTLVRPSEASGARWAELDLDTKLWTIPAERMKAKREHIVPLSPQALDILEVMKPISAHREHIFPSRNDPKQSMNSQTANAALKRIGFGGKLVAHGLRSIASTAMNEAGFNADVIEAALAHSDKNEVRKAYNRSTYLVQRKDLMNWWGLFCISSKSVNK 1248421..1248434 attR N/A AATCAGCGAATAAA #### region 3 #### 2051103..2052935 PHAGE_Bacill_vB_BanS_Tsamsa_NC_023007: hypothetical protein; NCTC11111_02125; phage(gi564292625) 3.02e-06 EscherichiacoliMSDQFDAKAFLKTVTSQPGVYRMYDAGGTVIYVGKAKDLKKRLSSYFRSNLASRKTEALVAQIQQIDVTVTHTETEALLLEHNYIKLYQPRYNVLLRDDKSYPFIFLSGDTHPRLAMHRGAKHAKGEYFGPFPNGYAVRETLALLQKIFPIRQCENSVYRNRSRPCLQYQIGRCLGPCVEGLVSEEEYAQQVEYVRLFLSGKDDQVLTQLISRMETASQNLEFEEAARIRDQIQAVRRVTEKQFVSNTGDDLDVIGVAFDAGMACVHVLFIRQGKVLGSRSYFPKVPGGTELSEVVETFVGQFYLQGSQMRTLPGEILLDFNLSDKTLLADSLSELAGRKINVQTKPRGDRARYLKLARTNAATALTSKLSQQSTVHQRLTALASVLKLPEVKRMECFDISHTMGEQTVASCVVFDANGPLRAEYRRYNITGITPGDDYAAMNQVLRRRYGKAIDDSKIPDVILIDGGKGQLAQAKNVFAELDVSWDKNHPLLLGVAKGADRKAGLETLFFEPEGEGFSLPPDSPALHVIQHIRDESHDHAIGGHRKKRAKVKNTSSLETIEGVGPKRRQMLLKYMGGLQGLRNASVEEIAKVPGISQGLAEKIFWSLKH 2052992..2053540 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; NCTC11111_02126 N/A EscherichiacoliMQFNIPTLLTLFRVILIPFFVLVFYLPVTWSPFAAALIFCVAAVTDWFDGFLARRWNQSTRFGAFLDPVADKVLVAIAMVLVTEHYHSWWVTLPAATMIAREIIISALREWMAELGKRSSVAVSWIGKVKTTAQMVALAWLLWRPNIWVEYAGIALFFVAAVLTLWSMLQYLSAARADLLDQ 2053692..2053767 tRNA N/A GCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTCGCGAGTTCGAGTCTCGTTTCCCGCTCCA 2053822..2053895 tRNA N/A GGCGCGTTAACAAAGCGGTTATGTAGCGGATTGCAAATCCGTCTAGTCCGGTTCGACTCCGGAACGCGCCTCCA 2053908..2053994 tRNA N/A GCCCGGATGGTGGAATCGGTAGACACAAGGGATTTAAAATCCCTCGGCGTTCGCGCTGTGCGGGTTCAAGTCCCGCTCCGGGTACCA 2053940..2053981 attL N/A TTTAAAATCCCTCGGCGTTCGCGCTGTGCGGGTTCAAGTCCC complement(2055005..2055145) PHAGE_Entero_P88_NC_026014: hypothetical protein; NCTC11111_02130; phage(gi744692752) 1.58e-26 EscherichiacoliMSQKSLTAITFCVTVILIIWMLHGSLCEIRMSFWGAEFAAFLQCKQ complement(2055335..2055595) PHAGE_Yersin_L_413C_NC_004745: Ogr; NCTC11111_02131; phage(gi30065732) 9.50e-09 EscherichiacoliMFRCPLCGASARIRTSRPENDSNTVRQKYYQCNNLECGVCFSTLEAFHKFTSKHASGVHSSEGIPWHELPASHRGNNQMSLPLPQN complement(2055638..2056747) PHAGE_Entero_P88_NC_026014: gene D protein; NCTC11111_02132; phage(gi744692751) 0.0 EscherichiacoliMTDTTMQLLSQGTDPVKMPDFDILAEGKTLSGVAERLMSLSLTDNRGFEADQLTITLDDADGQLQLPPRGARLTVLIGWKGEPLTEKGTYIVDEIAHEGPPDRLTVSARSADFRDEFNVKREVSWHDVTVERVVSAIAHRYGLKPQISEMLMDIEIDHADQTEESDMSFLTRMAEMLGAITTVKSGNLLFIMPGGGVNAQGQPLPSFAITRSSGDRHQFRIADREAYTGVRAYWLDLNYGKKKKVSVKRRKPPQPKKEKSSSREGDYMEGAEGNVFVLRKTYQNEQAARRAAAAKWQQLQRGAASFSITLARGRAELYPEMHGTVTGFKSEIDNQDWIIAKAEHTIDNSGFTTQLELEAKIPEWIAETE 2056905..2058089 PHAGE_Entero_P88_NC_026014: tail sheath monomer; NCTC11111_02133; phage(gi744692749) 0.0 EscherichiacoliMSETRFHGARVTENTDLVTAINDVDSSVIGIVATADDADAKLFPLNKPTLLTRVNDVLGKCGTTGTLYRALKAIADQVSTKVIVVRVAEHKEEDGKTQDQLVIGGSESDGSYTGMYALLVAEQDESIGYRPRILAAPELDTEAVTKSLCVIAGKLRAFVYASCHGCNTMAEAITYRQKFNEREVMLLWPDFIAYNPKTGKNETFPAPAYACGLRAYIDHEQGWHKSLSNVPVKNVLGMSRHVFWSLQAEDSDANSLNNKEITTIIRRNGFRFWGNRTPETNAYIFEVYTRTAQVLADSIAEAQFETIDSPLTPANVKDVISAIRAKLDSLVTAGKLIGAECWYDVVDNSTTDLRQGRVRIRYKYTPVPPLEDMELYQTFTDEYFEPAFAVLGGA 2058089..2058601 PHAGE_Entero_P88_NC_026014: major tail tube protein; NCTC11111_02134; phage(gi744692748) 8.40e-121 EscherichiacoliMAVPKHLRFFTLFVDGENEVGKVTSVTLPKLTRKTDSYRGGGMMGAVSIDLGLDDSALDASFVMGGAVRELFLKYGGTIDGTLLRFAGEYYTDAESDLYEVEMRGRVTEIDMGEAKQGEATSHTYAIKNTYYKLSVNDRPLWEIDLLNFIYRKDGKDIVPDRIRSALGLG 2058656..2059021 PHAGE_Entero_P88_NC_026014: tail protein; NCTC11111_02135; phage(gi744692747) 2.36e-78 EscherichiacoliMKETKNIDNENTVVADTVKETSERGVKLTQPIERGGEKITYVEITGAIEQAGSLRDLSLSDVLNLKAESMFTLLSRVTSPRLDEVTIKKMASCDFIQLCVVAVNFLSGADSGGKNEQATEA 2059172..2059906 PHAGE_Entero_P88_NC_026014: tail tape measure protein; NCTC11111_02136; phage(gi744692745) 1.25e-148 EscherichiacoliMKTLDIRVAFSAVDRLTRPAENARRLMGQFGDSIQRTQGAIKNLERQARSFELARDAVSKADAGIVKARRQLNALNQLQRTGTVLSEKQQKLMQQLSTRLERLNESRTREIQKMRELGGELKRHGISLTGSDNTIQQAIRRTEQYNNQLERERQALARVTRARERYSRAQETAGKLKTGGALAIGAAAAGGYAAGRFLQPAIGFGKEMSRVQALTRIDKNSPQFRPCAQVCPALHHRQKLRLMR 2059849..2060331 PHAGE_Entero_P88_NC_026014: tail tape measure protein; NCTC11111_02137; phage(gi744692745) 1.07e-40 EscherichiacoliMRASLSRLASPPKAAADALKELGVSVADARGKMRPMEDVLLDLYKATQKYGQVDQVSFFKDIAGEEAFVGLQTLVAAAGSGELQKLTRELQGVTGQSFTPQPANPLRGMLVHIRRQNVTQGLLQVFAWAVCHLFRHGMVPAGLTGQVMSLQVQLTETVMN 2060405..2060938 PHAGE_Entero_P88_NC_026014: tail fiber assembly protein; NCTC11111_02138; phage(gi744692741) 4.44e-127 EscherichiacoliMMHLKNITAGNPKTKEQYQLTKQFNIKWLYSDDGKNWYEEQKNFQPDTLKMVYDRNGVIICIEKDVSAINPEGASVVEVPDITANRRADISGKWMFKDGVVVKRTYTEEEQRQQAENEKQSLLQLVRDKTQLWDSQLRLGIISDENKQKLTEWMLYAQKVESTDTSSLPVTFPEQPE complement(2060966..2061493) PHAGE_Entero_P88_NC_026014: tail fiber assembly protein; NCTC11111_02139; phage(gi744692740) 5.27e-113 EscherichiacoliMMHLKNIKAGNAKTLEQYELTKKHGVIWLYSEDEKNWYEEVKNFQPDTIKIVYDANNIIVAITRDASTLNPEGFSVVEVPDITANRRADDSGKWMFKDGAVVKRIYTADEQQQQAELQKAALLSEAESVIQPLERAVRLNMATDEERTRLEAWERYSVLVSRVDTAKPEWPQKPE complement(2061495..2062664) PHAGE_Salmon_ST64B_NC_004313: tail protein; NCTC11111_02140; phage(gi23505468) 1.87e-91 EscherichiacoliMSTIQTGITEQVIAWLFDHLPTVYAVGAAVSISALMSLYDGRTLVQTVIEYLGLQETVNQASGALQKNQNGADIPDKRLFLRNIGATNSTTMSFNGGAGWFKLATVTMPQASSVVYISLIGGAGFNVGSPHQAGISELVLRAGNGNPKGITGALWRRTSVGFTNFAWVNTSGDTYDVYVEIGNYATGVNIQWDYTSNASVTIHTSPTYTANKPTGLTDGTVYVIYSSHIKPTAAEVGALSLSGGQLNGALGIGTSSALGGNSIVLGDNDTGFKQNGDGYLDVYANNVHVMRFVSGSIQSNKTINITGRVNPSDYGNFDSRYVKDVRLGSQQYYGVNNWQTWNFQCPSGHVLSGINVQDTGSNSADNIAGVYYRPVQKYINGTWYNVASV complement(2062667..2063035) PHAGE_Entero_P88_NC_026014: major capsid protein; NCTC11111_02141; phage(gi744692726) 1.83e-74 EscherichiacoliMVDLKNRKYQCEQVNYDTFISYPQLDAWSAHPDFQSRISAQIARQVALDRIMIGFNGTSHADESNFSTNKLLQDVNVGWLEHIRTDANERVMNDVTLTSRNMDNTVAHAGKKKREMIQLWGE complement(2063023..2063211) conjugal transfer pilus assembly protein TraU; NCTC11111_02142 N/A EscherichiacoliMKRSLWLLMLFLLAGHVPAASADSACEGRFVNPITDICWSCIFPLSLGSIKVSQGTRITWLI complement(2063208..2063840) conjugal transfer protein TraW; NCTC11111_02143 N/A EscherichiacoliMRCRGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYFINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGIDQVPARVSAVPGDRFLKVEFIPAEEGRK 2064044..2065462 PHAGE_Entero_P88_NC_026014: terminase ATPase subunit; NCTC11111_02144; phage(gi744692724) 0.0 EscherichiacoliMGINPNTIYAWKKRDQWDETPPVQRVTQSIDARLIQLTEKQNKTGGDFKEIDLLTRQLKKLHDGQPDVMAAGKKGRAKKLKNHFTPEQIAALREKIISRLEWHQRGWFDSLTLCREAGIRNRMILKSRQIGATWYFAQEALLMALRDDVAQPYQRNQIFLSASRRQAFQFKSIIQKAAAEVDVELKGGDKIILSNGAELHFLGTSAASAQSYTGNFYFDEFFWVSRFAELRKVAGAMATLSGLRRTYFSTPSTETHEAYAYWNGDRWNEKKASHKRQRFSVDWKTLHNGLICPDRTWRQIVTLEDVVNHGWKHTDIDEIRDENTEDEFLNLYMCEFVREGESAFNLNILIGCGVDGYDDWKDWKPFAPRPMGNRPVWIGYDANGSSGNGDSGAVSVVVPPAVPGGRFRTVETRRVQGLEFEEQARVIEEFTYRYRVHVVAVRLKTCSFMRPTGAKRGCKFCRSSRSPQRMSS 2065459..2065701 PHAGE_Entero_P88_NC_026014: PBSX family portal protein; NCTC11111_02145; phage(gi744692723) 3.47e-50 EscherichiacoliMNVKAASRDDVLAAHRVPPQLMGAMPGEKSAFGDVEKAARVYAINELMPVMEAMKHINDWLGEEVIRFNPYALLDIQPTS 2066555..2067919 putative KAP-NTPase protein; NCTC11111_02146 N/A EscherichiacoliMNITTNQNGFENGFDITSDIFNRKTLYDQMIRLIINAPDSNLVFALDDIWGSGKTSFVKMLKSELELTNSEYIDVVYFDAFENDYQSDPFISISSELYNLLKHRGVEAEDVADRIIKTGKKIGAKILIGGAKVAITTLTAGVVNGSALDEAGKTVSDSINSELESFVEEKIKSMEQEKNSIADFKKALEEIYTNTKRKTLIIIDELDRARPDYSLELLEKIKHLFSVKGMVFLLVMNREQFEKGIAYKYGDINTGLYLNKFIHYWFSLPKINVYDSMVLQASNKTTITTYIKKTLQQNHSLGINTDGAFVRVLSCLIETNNCSLREVERCISTMLVVDNHTCIANNDDNYYMIALALVCFLKVTSPDMLNRLLKKEMSSEEILELLNIKSDYFSSKTEIKLLKELLDYYYIDKETLKLLRNEKGSYVQRIEGDFAFEYNHIFNISTSIANMTIK complement(2068140..2069585) PHAGE_Entero_P88_NC_026014: replication protein; NCTC11111_02147; phage(gi744692716) 0.0 EscherichiacoliMMVFAHPEEIDTIVSHTRDIAIQEDRHELGNDITPRFKVEYVDGSKGTPTSYIATYIGKNLDSRAVDGIDPKTGKPRVDHETGKSMAESVERAIGWARLHRVRQFQFFGIPSRQVWRELRRLASQMARNPEGPQRLKDDAMDAVLAAADAGCFATYIKKQGGVLVPRKDYLIRTAYDLADELNDYGEQSVQIYGIWSPLIGESSRVCTHPDNWKLVRRKPEAEDSARENGFDLQGGPAAPWTRGNNCPRVQETDNNGTEQPEERPALWPQLPDGVDVDEWMRSLKRHERRALMRSLRDKQAKNSSDEMQSWTQSRKQQRPLPDNHELLAKEWRESAESLGLHIGEQQMQHLLRGGSLYVDGSIIAPQGFEIVRKPDTRPDSRITQLWQRLSRNHGVSSTEIRHNPVASYLEQLGASDPKAAARLASTLQQDQNTMKTPVTVLSDMLRAIHDTEHTQRICETTERACHKADLLRRGVKSGNK complement(2069605..2070627) PHAGE_Entero_P88_NC_026014: replication protein; NCTC11111_02148; phage(gi744692716) 0.0 EscherichiacoliMASLRLLPSYLRDPLIRHLSFLRKKQEADRRKGKKSWQAERYARGTLRKIFERLDSTDGRWLTPGYRSLAGRERLDDLLYLPQLNKHQIQTLATMTAAMFSSTFEKLCDGFGATDGELTMDVTLKAYQMLARMALHLHAMPPHYDALTTDKDRRNEPDTELLPGAILRLTCAEWWKRKLWLLRCEWREEQLRAACLVSRKTSPYLSQDALSEFRAQREKTRDFLKSFMLENEDGFTIDLETVYYAGVSNPVHRKAEMMATMKGLELLAEARGDKAVFLTVTCPSKYHATTENGHPNPKWNGATMRDSSDYLVNTFFAAVRKKTEPRRPALVWHPHGGASS complement(2070911..2071276) PHAGE_Entero_P88_NC_026014: hypothetical protein; NCTC11111_02149; phage(gi744692715) 2.29e-82 EscherichiacoliMILANDFLEYLLNTERDLAARVRDRYDMYLKSLPVPQLADGKIVIDGRYMIDSHEGNYRLYRIEGGTPSVIGIYQRPSSAIVDVIADSIRITHRHADTEDTVLEIQRLATVCRDTLNGMTK complement(2071349..2071579) PHAGE_Entero_P88_NC_026014: derepression protein; NCTC11111_02150; phage(gi744692714) 2.61e-44 EscherichiacoliMADRKQHRAIAERRHIQTEINHRLSRASRVAQIMHINMLHERSHALSNIYSASVFSYLADDLHELQQLIQQQNKLH complement(2071902..2072201) PHAGE_Entero_P88_NC_026014: hypothetical protein; NCTC11111_02153; phage(gi744692710) 4.45e-58 EscherichiacoliMSTINHQKLRELAFALQRMATPQKLLAFRAMLSPSAVLALLDQLEHARTTAPAIRLTLHHEIADFCATLGAPGEPETPEAMQQELLQRIDNVFDFFLNQ complement(2072198..2072464) PHAGE_Entero_P88_NC_026014: MarR family transcriptional regulator; NCTC11111_02154; phage(gi744692709) 1.74e-41 EscherichiacoliMTILDYIATHPGCSGGEIAAALNTPTTAINAELRQLWRGGLVIRTNRSTGGRARKTGGQASYHVNPMPFGCSNPLTHMFNQLLKEART complement(2072461..2072664) PHAGE_Entero_P88_NC_026014: hypothetical protein; NCTC11111_02155; phage(gi744692708) 2.04e-35 EscherichiacoliMAIKHFSVVRFTSRGREYEVDERLITTIDKHRSEKDAHHIYLTDGTYFCATNVARVNLIRQVQEPRR complement(2072688..2073104) Prophage protein; NCTC11111_02156 N/A EscherichiacoliMNAKEKNIINTLKIVSAEQDKLSRAAQKDNQHMAALYALTIAIATSEAAKVIEEQSKEIDTLKTQSTVAAMNPSSIGRCIYILGSAMMLQYTIIAELHGKYLITPYHTKESELLTNLRLIERSQAVFIDDAQRAVFNA complement(2073197..2073310) PHAGE_Entero_P88_NC_026014: membrane protein; NCTC11111_02157; phage(gi744692707) 9.77e-17 EscherichiacoliMSIFISWLVLIISVACAIGIMRIIHSVKKIERFFTDK complement(2073307..2073549) PHAGE_Entero_P88_NC_026014: DNA modification methyltransferase; NCTC11111_02158; phage(gi744692706) 2.95e-51 EscherichiacoliMGKEYKTLINKALERFYFRLSASGAHAEHAARDSLTRAIRSLYDVAFYADDLDALNELSELICAAECGEHIEPYKLGNIA complement(2073561..2073839) PHAGE_Entero_P88_NC_026014: hypothetical protein; NCTC11111_02159; phage(gi744692705) 1.94e-49 EscherichiacoliMTKEHAQGVFIRFIDFRGELLLRASAIDGVVPSEKNAATYVYLNGTRLTVELPYQTVREIISEAEKARQVNGDEPYIEIICMDSEAEIQKAD complement(2073850..2074200) PHAGE_Entero_P88_NC_026014: hypothetical protein; NCTC11111_02160; phage(gi744692704) 1.17e-67 EscherichiacoliMKKNANNPYSKFRNGVERHVHHVATSASRSNSRYNLNETHATPDGHAVKQIGEHAWLIEKAGIVVHKCPRNPFTGNRIFALNCGDNHFGQDFTLYEALRTVDRLLRGQSFIKQADL complement(2074222..2074425) PHAGE_Haemop_HP2_NC_003315: orf2(S)cox; NCTC11111_02161; phage(gi17981819) 1.54e-11 EscherichiacoliMSGITININVNAPYVSLQKYAEITGIPLNTCKKMLADGRIIIRPKRAKMEKPEVNLVAMLKDALANS 2074497..2074634 Uncharacterised protein; NCTC11111_02162 N/A EscherichiacoliMRAMLEDERCSLAAISSMTARSSRDSRSASLGPVAVLRGMRDLVS 2074724..2075128 PHAGE_Burkho_KS10_NC_011216: hypothetical protein; NCTC11111_02163; phage(gi198449275) 5.51e-21 EscherichiacoliMKNDIGQRLREERERLGLSQVAMSDIGGVKKLTQLRYEKGDSFPDAAYLAALSRFGLDVQYVVLGIHSPETYNDDEQELITRFRAASLDVKNAVIGALKGAISEKETQPSGRELNISGGNNRIAGRDYNETKGR 2075144..2075794 putative transmembrane protein; NCTC11111_02164 N/A EscherichiacoliMAVNSNGSNNRVAGRDFHEKNIQIERYDGSHTVNIAIPSNNDDDDRPLLKAQRKELNSLVAAIAEASNTEAFIIWQKVHAEIGVAGIDDMTVNQYKTAESFLHAMLERCKDHDACKALVSLLLRNSEDCGLRQKLLRYCHINFGTGRLNDLTRSQLQSALSWLEQQSASSHTESSTLPEVRLRASELIRLYPKEIIFFICVGVLVGGVISRAFFNL 2075824..2076171 PHAGE_Salmon_SEN1_NC_029003: hypothetical protein; NCTC11111_02165; phage(gi971764937) 7.90e-05 EscherichiacoliMKVKKVQLLVTFLSMFSFSAVAMPFKTIERESFNGVWPFNTDEVQLQCLDGNPYVMNFDDNKLYALTGLARIKGKTFGALPLDNNNPFWLDNDAAPGLKKSLGDVTKAAFDLCDK 2076304..2077179 PHAGE_Haemop_HP2_NC_003315: integrase; NCTC11111_02166; phage(gi17981816) 3.29e-126 EscherichiacoliMNSRVGDEFQDGSGPRLSELIARWFEMYGKTLSSGAERKVKLEAICSRLGDPFASQFDKNMFATYRERRLSGEWNPKGKKKLSEATVNREQSYLHAVFAELKRLGEWSGENPLTGIRKFREEEKELAFLYVDEIERLLIACDESRNKDLGVVVRIGLATGARWSEAEGLKQSQVLPGRITFVKTKGKKNRTVPISPQLQAMLPKKRGALFSPCYEAFDAAIKRAKIELPDGQLTHVLRHTFASHFMMRGGNILVLQKILGHSDIKMTMRYAHFAPGHLEAAVELNPFDNRG 2077286..2077327 attR N/A TTTAAAATCCCTCGGCGTTCGCGCTGTGCGGGTTCAAGTCCC 2077536..2078201 PHAGE_Sphing_PAU_NC_019521: gp60; NCTC11111_02167; phage(gi435844563) 9.49e-07 EscherichiacoliMKTGPLNESELEWLDDILTKYNTDHAILDVAELDGLLTAVLSSPQEIEPAQWLVAVWGGADYVPRWASEKEMTRFMNLAFQHMADTAERLNEFPEQFEPLFGLREVDGSELTIVEEWCFGYMRGVALSDWSTLPDSLKPALEAIALHGTEENFERVEKMSPEAFEESVDAIRLAALDLHAYWMAHPQEKAVQQPIKAEEKPGRNDPCPCGSGKKFKQCCLH #### region 4 #### 2820551..2820565 attL N/A GTTTTGATAACCGTT complement(2825599..2825979) PHAGE_Pseudo_Lu11_NC_017972: putative tail assembly protein; NCTC11111_02890; phage(gi388684690) 9.00e-20 EscherichiacoliMSKFTTPAILEMLGHYKWRVYEPFEFYLSDDNSDVIKVPAGFVTDLASVPRIFWTFLPPDGRYAKAAIIHDYMYDNALRTKKEADLIFLDGMRVLGVPEWKRSVMYHAVRMFGKGRYAQNRTLPGV complement(2826700..2828757) PHAGE_Stx2_c_86_NC_008464: hypothetical protein; NCTC11111_02891; phage(gi116221995) 0.0 EscherichiacoliMPILAPGFLGGSSAGNGGGPVSSVQQPEYFYVIPVAGQSNAMAYGEGLPLPDTLDAPHPRIKQLARRATVTPGGDACKYNDIIPLDHCPHDVQDMSGISHPRADLSKGQYGCVSQTLHIARKLLAWIPDNAGILMVPCCRGGSAFTQGVDGTFNVVSGASETATRWGAGKPLYRDLLTRTKAALDSNPKNMLLAVCWMQGEFDMTGAAYAQQPALFDAMVRQFRTDLADYAGQCPDFRPDSVPWLCGDTTYYWKRNYPAQYDAVYGAYSKTSVSGVHFVPFMVSEDGTNTPTNAPAEDPNVPAAGYFGSASRTSANWTSSIRNSHFSSWARRNIIAERMAAAILLHAGRRSLLAAPVSGSAASSTGDTGNVGTSTLKYAPVVEDAGYNGRRGDGTPEAQGWSASGGNFNVAPHPDGKGGHVLQIRRKASEVWKMERATRQAADLLRYGGEVQCNFRLVNTLTANQFAFGCYLLVNESDVPAGASLRLKAEGTTPALMNFFIQTNATDLNLMMHCKPDNIRLGTYGAYNQDWHSFRVVYHGGNTARATLYLDGESKGEFTLAYSPGAVDAGMLQLTNITSSPTYGCNIKDFTVKIYRDDAIVSLPDDDVSSLIYFPAGERGGKVVLPDAKISAGNTVQVVVNNAGIIAIEPASSNVLLNNLPSSATTDRSVTLVQTSLDGKTWVIT complement(2828767..2829000) Uncharacterised protein; NCTC11111_02892 N/A EscherichiacoliMATREMIVGREWQELTDGSQTVFVQINGVADVCSSARKPDTAHPAHNMNNEKFTTTPPDRLWIRASGYDGSVRVIVT complement(2828982..2829296) PHAGE_Salmon_GG32_NC_031045: hypothetical protein; NCTC11111_02893; phage(gi100012) 2.06e-06 EscherichiacoliMGTRVLAVGRAWQQLTDGEENMIFTFSGVIELCDSDIRPGESALSLRYPGQTIIISPPTKAWVRAAGYDNTVRLFISDRVAASVPVIKNRVGQKGPEALWQPEK complement(2829311..2829739) PHAGE_Escher_Av_05_NC_025830: tail fiber protein; NCTC11111_02894; phage(gi730985066) 5.12e-09 EscherichiacoliMTPFTVTEAMLASARQAKRDEINAWRDAQEEKEYLMTWNGRRWDYGKKTQSRMSTSVTMASRNVLPDGFAWTDGDNTVVPVTAEELLALADAIEKAMFEKGMQINQRQLQMKAEMNALTVLDAIRNYRVGWNESVEDITRTG complement(2829736..2829960) PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage tail tip assembly protein; Lambda gpL homolog; NCTC11111_02895; phage(gi169257314) 2.64e-23 EscherichiacoliMQDVPQDTLNETTRTEQSARISLWEFDATAIGGERYFFCNEPNEKGEPVPRQLMTRLTMVSSSIQTWSPVNTAK complement(2830096..2830887) PHAGE_Klebsi_phiKO2_NC_005857: major capsid head protein precursor; NCTC11111_02896; phage(gi46402092) 3.41e-152 EscherichiacoliMPQIEELRRQRAGINEQVQALATIETTGGTLTAEQLTEFASMQQQFTDISAKIERLEAAERAAALVATPVRGTQQAPGVIVKAEPKQYTGAGMTRLVMSIAAAEGNIQEAAKFAAEELNDPSVSMAISTAAASGGVLIPQNLHSEVIELLRDRTIVRKLGARSIPLPNGNMALPRLAGGATANYTGEGKDAKTSEARFDDVKLTAKTMIAMVPISNQLIGRAGFNVEQLVLQDILTAISVREDTCTVREYVVHFDGQAVFCHR complement(2830963..2831907) PHAGE_Klebsi_phiKO2_NC_005857: putative head maturation protease; NCTC11111_02897; phage(gi46402091) 0.0 EscherichiacoliMRADLVYLMTTKLLNLPHLAEMVFGVPHYATQQTMDAVKAVLLPRIQGTVTDPVITMALNPDDSPSPEELQPAGGIAVIPVHGILVPRRGQITAMCTELTSYERIRSQLHSALNDPSISEIVLDINSGGGLAPGCKELADYIYQSREMKPITAIVNFNAFSAAYFIASACSKIVASQTSGVGSIGVIMEHLDTSKLEEIMGVKFTALYRGDNKNNGTSHAALSESALTMFNKMLDDMYETFTSSVAEYRGLKQQAVTDTQAGIYFGADAISAGLADEVSDPQSAINAIAAKYKQPSQTTSIKLQAAAMDLQTRM complement(2831920..2833179) PHAGE_Klebsi_phiKO2_NC_005857: putative portal protein; NCTC11111_02898; phage(gi46402090) 0.0 EscherichiacoliMFIPQMFRGKSQSGGGFWQAMLGGVSSSQSKAGIIITPETALALSAVRACVTLLAESVAQLPCELYRRGANGGRERATDHPVYDLIHSQPNKKDTSFEYFEQQQGLLGLEGNCYSIIDRDGKGYPRELIPVNPKKVIVLKGPDGMPYYELPEIGETLPMRMMHHVKVFSLDGYIGSSPIQTNADVLGLNLAVEEHASQVFRRGTTMSGVIERPKEAPTIKNQEKIDQLLAKWTDRYSGMRNAFSVALLQEGMSYKQLSQDNEKAQLLQSRQWGVEEVCRLYKIPPHMVQMLAKATNNNIEHQGLQFVMYTLLAWLKRHEGALMRDLLLPSERGSLYIEFNVSGLLRGDQKSRYESYALGRQWGWLSVNDIRRMENLPPIAGGDKYLTPLNMVDSKQILPGNNAPTAKQLAEIETILARA complement(2833179..2833358) PHAGE_Klebsi_phiKO2_NC_005857: Gp3; NCTC11111_02899; phage(gi46402089) 5.15e-21 EscherichiacoliMLITLLSFIIGLAGAGLVSAGAWLISPAAGLITGGSICLLWSFLIAKSMSASVIKSGGE complement(2833352..2835073) PHAGE_Klebsi_phiKO2_NC_005857: putative large terminase subunit; NCTC11111_02900; phage(gi46402088) 0.0 EscherichiacoliMATYPNVNAANQYARDVVGGKILACQLTVLACQRHLDDLERAKDPAWPYRFDKNKAERFLRFAQKMPHTAGEWARKKLRIEFEPWQKFALGVPFGWVNKKSGFRRFSEIYIEVPRKNGKSAIAAAVGNYMFCADGEHGAEVYCGATTEKQAWKVFSPALQMVKKLPALRQKYSVKPWAKKMTRPDGSVFAPVIGDPGDGDSPSCAIIDEYHEHQTDALYTTMTTGMGAREQPVTLIITTAGYDITSPCYEKRVQIVEILRRNRTGEENETIFGIIYGLDDDDDWTRPEALIKANPNFGVSVKEHFLRAKQLLGISNPSQTNKILTKHFNRWVSAKTVFYDLQRWMAAADKNLKLSDFVDEDCWLGIDLASKVDLNAVVPVFRREVAGITHFYCVGPLFWAPEDTIYSPDPTLKTISERYQSFVKQGVLIPTEGAEVDYRLIFESILQLRQQVKIVQCPIDPYGATSLRHLLEEEGLESVEIRQNFTHMSDPMREIEAALASGRFHHDGNPIMNWCIQNVIGRYLPGSDDIVRPGKERKQNKIDGAVGLMMGVGRAMLNGTVSKSAYDEEDITC complement(2835073..2835507) PHAGE_Klebsi_phiKO2_NC_005857: putative small terminase subunit; NCTC11111_02901; phage(gi46402087) 2.20e-30 EscherichiacoliMAGGIRSSGGGRKPVLPSGQKSKLTRIAPPAELMGENAIRLWKTQSKILIERGVFELEDAPLLLAYCNAFHLMLEAEKLLSSSLTTESEMGGLKKHPAVNIRNDSVSQIARLGSLLGLDPLSRIRMRGSGNDPDDDGNEFDEFD complement(2835843..2836205) PHAGE_Klebsi_phiKO2_NC_005857: Gp60; NCTC11111_02902; phage(gi46402146) 7.99e-72 EscherichiacoliMPARAKRPCRHKGCAAVTNDASGYCDQHRQRHAGDGWRNYQAGKSRQERGYGRTWEIKRVRILQRDKYLCQNHRRQKIAKKATSVDHIIPKAHGGTDDDFNLESLCWDCHRAKTARERIR complement(2836712..2837089) Uncharacterised protein; NCTC11111_02903 N/A EscherichiacoliMATEDIQALLSKVNALRFEDKRIEKETGEIENEIQAQFLRDGKTRSTLTITFMRGFFGLIVFSFIFVIVYNYCAVQWVLQLQSKGLMEASKSIALLELDKVLSIMVSALGTSLGFIIGYYFKDKK complement(2837092..2837361) Uncharacterised protein; NCTC11111_02904 N/A EscherichiacoliMSNVKKIDAIVQNLFEFRDATGELTDKNIVLIQKIITNLPDYAGKDPYEFYSSFSEDINESLKAIANYHKAHAKYINALDKLAELRSEG 2838107..2838763 PHAGE_Shigel_Stx_NC_029120: hypothetical protein; NCTC11111_02905; phage(gi985761266) 1.41e-81 EscherichiacoliMRILTFDITCPHCLRENAVLEGWAELRINAGPLVNIAFCCRSCFQSGIAIVKMNNPGGYLPRAKSRQNNDVNVIIPGNTEYQLIDIIPKPTLLNAPEHTPPRAAMAFIEAKDNLGRCRFDTSVMLCRKVLDIATRELLGNDSKDEKLVKRISMLHAKGLITDQMREWAHIVRIDSNGAVHSDEEFSKEDAQEMIGFTEVFLLYAFTLPDMVDNKKQNQ complement(2838899..2839168) PHAGE_Entero_mEp390_NC_019721: hypothetical protein; NCTC11111_02906; phage(gi428782715) 7.33e-39 EscherichiacoliMGLEMIIGLVVAVLAAIAGAFGLGKSRGTSIAETKADQQRTEERAIAIEAVAERRVETTKGARDVQQTVNHMPDDAADRELRKNWTRKD complement(2839176..2839790) PHAGE_Salmon_ST64B_NC_004313: lytic enzyme (putative glycohydrolase); NCTC11111_02907; phage(gi23505496) 2.53e-124 EscherichiacoliMNQSQFQQAAGISAGLSARWFPHIDAAMKEFGITATNDLAMFIAQVGHESAGFTSLVESFNYSVEGLKKTFGKRLTPYQCEMLGRVDGKQVAHQPQIANLVYGDRMGNNSQGDGWKYRGRGLLQITGRENYTKCGTALKLDLISTPELLTQERHAARSAAWYFTLRGCLMYSGDVARVTQIINGGQNGIKDRRERYAKAKAALV complement(2839790..2840071) PHAGE_Entero_mEp390_NC_019721: putative holin; NCTC11111_02908; phage(gi428782713) 2.98e-26 EscherichiacoliMVQNDPSATFNALLCAGVVLTLMFYRRGDSRHRPWISRLAWLLTVIYSAVPLAYLCGIYPYSSWATIGANFIFLSVLVAVRGNVARLVDHLRH complement(2840058..2840444) PHAGE_Salmon_118970_sal3_NC_031940: hypothetical protein; NCTC11111_02909; phage(gi100130) 4.60e-76 EscherichiacoliMSDPISGSGMAGGVLTGASVYGFLSGTDYGVVFGAFAGAVFYIATAADLSAARRLAYFLVSYIAGILCSGLVGSKLAQATGYSDKPLDAIGAVIVSALAVKILTFLNNQDVGSLVALITRRGGSGGTK 2840495..2841214 Uncharacterised protein; NCTC11111_02910 N/A EscherichiacoliMILYIKILQYIFDQLLKNTMDSNTLTIIGTFIVAIISGLLAYSSSLSAKEKEVKLSAYEKLGLDIHANLEKLYNNTEWLLLIFQHKNTLNRGDLIIANEQVSLDVDKLRELSIRMRFFDNACYKKYESVVQSHGNLIPQILGYTRHPHETPRDASELYSREETQEFINKLSILKDEINSTKIHITNKIAKEYNKALSSSRKVTVLAFIVLFTAFIAFIIFPLKEQSPSPAKEKVMLLSS complement(2841433..2842284) Uncharacterised protein; NCTC11111_02911 N/A EscherichiacoliMKIDNPENPLERNDFSMDDFHHYLREFDKAVCEANAVSQGVGVRMAEAFKGWSTYIFSRICIHASIMISNVPKSRWAKRDYDFWDFSAIAPHVRAILEAELLFMYLSENPDSTEEWSAKLNVMHMNDCVKRIELFTSSDNTKALDFYHEQKDIITERLNNNPVFLSLEQGTRKRCLTGKALMIPNRDELLVKLGKDPKSFKIMFDFLSHYTHILPMSYYKMEPNGRGTGCFNNYDFGYMIMGMIICTESLTKCTDRLVELFPDVRRLRKGTKSKFTLGPKPTK complement(2842448..2843137) PHAGE_Klebsi_phiKO2_NC_005857: lambda Q-like transcription antiterminator; NCTC11111_02912; phage(gi46402124) 3.15e-12 EscherichiacoliMNQQDLNFVRIELRRALPDLSGGTKGQLEAFSEHPPADKNATPRRGIHLVELEGEKGPRFVNSLSAPLYVLETRSRCRPMPPIKDAEFESAPWRRAVSALSGYQQAWLRYCYGFDLSYKHQVMMCEYVWKTYQKCLGDNSLQERVVKKLIGLVWLAGQEIAATRNNETYKDYAGAALARMVSVDRSTWLRVYSGHWAGLKAAFTQLDESALAMALEYYEEEEALKVAEM complement(2843159..2843545) PHAGE_Entero_SfV_NC_003444: hypothetical protein; NCTC11111_02913; phage(gi19549032) 4.73e-68 EscherichiacoliMPSPSATSLVQKKAKKILTLSVDPESPESFMLRPKRRRWVNETYTRWVKTQPCECCRRPADDPHHIVGHGLGGTATKAHDLFVIPLCRECHDELHADVPAFEQKHGTQLELLLRFMDRALAIGVIAKA 2843640..2843816 Uncharacterised protein; NCTC11111_02914 N/A EscherichiacoliMRRMKVKELVTEAFASVAELPPKHAPLMREVATRLDATFAALKESLVQLEQERKGKTP 2843813..2844067 PHAGE_Entero_P88_NC_026014: MarR family transcriptional regulator; NCTC11111_02915; phage(gi744692709) 2.95e-16 EscherichiacoliMTVFEYLQAHPNTTSGEIAKGMNKKTPAVAGALSQLYGTGRIVKSGVRKGIPTYRVNDMPFGCSNSLTMMFNQLLNRARQGATQ 2844064..2844408 Uncharacterised protein; NCTC11111_02916 N/A EscherichiacoliMSKSLNARCIRRWTVEFKSRCDSKYSPYWRKRDLRGYIRECGLITAYCMVERLAEDNARVDFFGHTHAWSPEFSAWYDERRDKYFKEAHAYLNEDATNDEIDEEIQNELEAWND 2844401..2844730 Uncharacterised protein; NCTC11111_02917 N/A EscherichiacoliMTNSLNKQDLDDALDFDLFEGDFGTPCDTELSNKIVTSRGEYKCHICAGVILKDEIHRSTAWKFDGELMSYRCCNECCVAMVKSVNGEYEEEDPIEARHALGHQRRGAA 2844727..2845029 phage protein; NCTC11111_02918 N/A EscherichiacoliMTTNNHPANGSVSLDRLHQIREHLLHDTQYSNGGNRAYILADMLKVVDEVLAGRNAEPVADVVAWHKKGEERTCNIRWRRFDVSPGPLYAVPPKLTSDNL 2845075..2845320 Excisionase domain protein; NCTC11111_02919 N/A EscherichiacoliMIQMLTLEEWATDKYRSNPPSVSTLRRYAKQNLFSPPAMKQGRLWRVREDAELVGELAAPVIKKSDSPKLQRILSDGCETT 2845301..2846428 PHAGE_Entero_HK022_NC_002166: integrase; predicted; phage integrase; NCTC11111_02920(gi9634144) 3.88e-69 EscherichiacoliMAARPRKNNVSIPNLYPLYSRKVNKVYWRYKHPVTGKFHSLGTDEVEAKAIATEANARLAEQRSRQVLAISDRIATGKGKSITTVTWLERYWKIQEERFASGDIKENTYKQKAKPVALLKERAGMKLISSVDVRDIAQILEEYLSAGQPRMAQVVRSVLIDVFKEAQHYGEVPPGHNPALATKQPRRKITRQRLSLEEWLKIFDIADKKHQYMGNAMLLALVTGQRLGDISKMKFSDIWDDHLHIEQEKTGSKIAIPLSLRLNAINWSLRDVVARCRDYAVSPYLIHFFRATSQAKRGAQVKSNTLTMNFSKARDKACIKWGDGTPATFHEQRSLSERLYKDQGIDTQKLLGHKTQHQTDKYHDDRGKEWQKIPS 2847076..2847090 attR N/A GTTTTGATAACCGTT complement(2847155..2848405) isocitrate dehydrogenase; NCTC11111_02922 N/A EscherichiacoliMESKVVVPAQGKKITLQNGKLNVPENPIIPYIEGDGIGVDVTPAMLKVVDAAVEKAYKGERKISWMEIYTGEKSTQVYGQDVWLPAETLDLIREYRVAIKGPLTTPVGGGIRSLNVALRQELDLYICLRPVRYYQGTPSPVKHPELTDMVIFRENSEDIYAGIEWKADSADAEKVIKFLREEMGVKKIRFPEHCGIGIKPCSEEGTKRLVRAAIEYAIANDRDSVTLVHKGNIMKFTEGAFKDWGYQLAREEFGGEPIDGGPWLKVKNPNTGKEIVIKDVIADAFLQQILLRPAEYDVIACMNLNGDYISDALAAQVGGIGIAPGANIGDECALFEATHGTAPKYAGQDKVNPGSIILSAEMMLRHMGWTEAADLIVKGMEGAINAKTVTYDFERLMEGAKLLKCSEFGDAIIENM 2848577..2849230 ribosomal large subunit pseudouridine synthase E (rRNA pseudouridylate synthase E); NCTC11111_02923 N/A EscherichiacoliMRQFIISENTMQKTSFRNHQVKRFSSQRSTRRKPENQPTRVILFNKPYDVLPQFTDEAGRKTLKEFIPVQGVYAAGRLDRDSEGLLVLTNNGALQARLTQPGKRTGKIYYVQVEGIPTQDALEALRNGVTLNDGPTLPAGAELVDEPAWLWPRNPPIRERKSIPTSWLKITLYEGRNRQVRRMTAHVGFPTLRLIRYAMGDYSLDNLANGEWREVTD 2849240..2849701 PHAGE_Strept_YDN12_NC_028974: hydrolase; NCTC11111_02924; phage(gi971762176) 1.07e-06 EscherichiacoliMFKPHVTVACVVHAEGKFLVVEETINGKALWNQPAGHLEADETLVEAAARELWEETGISAQPQHFIRMHQWIAPDKTPFLRFLFAIELEQICPTQPHDSDIDCCRWVSAEEILQASNLRSPLVAESIRCYQSGQRYPLEMIGDFNWPFTKGVI #### region 5 #### 3063113..3063126 attL N/A CGTGATGATGTCTT complement(3064448..3064978) PHAGE_Escher_pro147_NC_028896: tail fibers protein; NCTC11111_03133; phage(gi971753728) 3.02e-96 EscherichiacoliMQHLKNIAAGNPKTVAQYQLTKNFDVIWLFSEDGRNWYEEVSNFQKDTIKMAYDENNIIVAITRDASTLNPAGLSVVEVADITANRRADDSGQWMYLDGQVRKREYSSEEVNRQTEQRKATLLSEADTIIRLLERSVRLNMATEEERTRLSAWERYSVLLSRVDSANPEWPQKPEQ complement(3064982..3065833) PHAGE_Escher_pro147_NC_028896: tail fibers protein; NCTC11111_03134; phage(gi971753729) 3.65e-58 EscherichiacoliMLHSVKWFLRGSIRIPFFSINKPNPLLMISINSRKYFSEESCLSECCFSSYNPISATDVNAYSLGWSGKYGADAGGVPWNEKTGLYTVSGSGSSYIVAHFYTGIGSCRSFQLRADYRNGGIFYRSSRDGYGFEADWERLFTTTGGTLNGAVGIGAQNTLGGHSLALGRGDTGLKQNGDGNLDVYVGNARVMRLSNGSIQVSKGLNVSGRVNLSDYSNFDIRYVRDIRLGARVVQGMQKGVTYEKSGHVITGLCLVGDADGDNSAVYRPVQKYINGTWFNVSQV complement(3065988..3066434) Uncharacterised protein; NCTC11111_03135 N/A EscherichiacoliMDRDDILDRILYGYFLEQLFSVATGRLDKLLSVVSIILGSSVIGGFIPEISGVFIVVIATVQTIYGFGQKSGNAMRKSAEYLQLFDDAEKYSDSELKMQLKILEKTDVHIWSSLKDIAILKTQIKIGVSIEQQEKLPTKSKLMRFLCS 3067132..3067314 regulator of cell division encoded by prophage; NCTC11111_03136 N/A EscherichiacoliMETLLPNVNTSEGCFEIGVRISNPVFTEDAINKRKHERELLNQICIVSMLARLRLMQKGR 3067317..3067520 phage protein; NCTC11111_03137 N/A EscherichiacoliMNTVFALVLTVFLNTGEPVDLVIGIHDSMKECMAAAAEQKIPGNCYPVDKVIRMDNNEIPAGLKTAP 3067601..3069538 PHAGE_Salmon_118970_sal3_NC_031940: baseplate hub subunit; NCTC11111_03138; phage(gi100107) 4.18e-71 EscherichiacoliMSKVFICAAIPDEQAIKEEGAVAERKETGKYTSVVDLARARANQQYTDNSTGKISPVIAATHREYKQTWKTLDDELAYALWPGDVDAGNIDGSIHRWAKNEVIDNDREDWKRISASMRKQPDALRYDRQTIFGLVRERPIDIHKDPVALNKYITEYLTTKGVFEDEGRNQSATDTLSSPVPETDAVETAIPDNEKTECKVEVEPSVEREGPFYFLFTDKDGEKYGRANKLSGLNKALTAGATEITKEEYFARKNGTYSGSQQNTGASDTTAQPEPVKVTADEVNKIMQAANISQPDADKLLAVSRGEFVAGISDPNDPKWVKGIETRDSVNQNQQETEQNDQKAEQNSPNALQNEPETKQPEPVAQQEAEKVCTACGQTGGGNCPDCGAVMGDATYQETFDEENQVEVQENDPEEMEGAEHPHKENAGSAQDHASNNETGETADPLIAVNGHHVITSTSRTCDHLMIDLETMGKNPDAPIISIGAIFFDPQTGDMGPEFSKTIDLETAGGVIDRDTIKWWLKQSREAQSAIMTDEIPLDDALLQLREFIDENSGEFFVQVWGNGANFDNTILRRSYERQGIPCPWRYYNDRDVRTIVELGKAIDFDARTAIPFEGERHNALDDARYQAKYVSAIWQKLIPNPVDF 3069605..3069856 putative excisionase; NCTC11111_03139 N/A EscherichiacoliMYELTLSPAEIQEITKYERYTKQQHQLRLHGIPFVIGPKNEPIVLRRDIPHGLTTMPKAPELVSAEPDFEALNNGKTKKKQKR 3069825..3070844 PHAGE_Salmon_118970_sal3_NC_031940: baseplate subunit; NCTC11111_03140; phage(gi100105) 6.65e-109 EscherichiacoliMGRPRKNKKDNALPPRVRSNGYSYVWKPEGSTRTIGLGRVRETSVAKVWQNYELEKAKLHNIMTVAKLWHMFMDSPAFTELAPRTQKDYRQHQRALLAVFGKVLADNVKIEQVRIFMDKRGLESKTQANHELASLSRVYGWGYERGYVKNNPCKGVRKFTLKARTVYITDEQYAAIYAEAIPQLRIAMEISYLCAARLGDVLELKWQDIMEKGIYIEQNKTGTKQIKEWSPRLRTAIQLARNVSSGTCEYVINTTKGGKVIAKTLNNWWNQAKRAAEQKAGVPFGCNFHDIKAKGISDYEGSSRDKQIFSGHKTENQVLIYDRKTKITPTLDLPLVVSK 3071252..3071911 putative carrier/transport protein; NCTC11111_03141 N/A EscherichiacoliMDRIVSSSHDRTSLLSTHKVLRNTYFLLSLTLAFSAITATASTVLMLPSPGLILTLVGMYGLMFLTYKTANKPTGIISAFAFTGFLGYILGPILNTYLSAGMGDVIAMALGGTALVFFCCSAYVLTTRKDMSFLGGMLMAGIVVVLIGMVANIFLQLPALHLAISAVFILISSGAILFETSNIIHGGETNYIRATVSLYVSLYNIFVSLLSILGFASRD 3072002..3072331 PHAGE_Podovi_Lau218_NC_024329: sulfur transfer protein, DsrC; NCTC11111_03142; phage(gi971848691) 1.54e-06 EscherichiacoliMLIFEGKEIETDTEGYLKESSQWSEPLAVVIAENEGISLSPEHWEVVRFVRDFYLEFNTSPAIRMLVKAMANKFGEEKGNSRYLYRLFPKGPAKQATKIAGLPKPVKCI complement(3072328..3072606) acylphosphatase; NCTC11111_03143 N/A EscherichiacoliMSKVCIIAWVYGRVQGVGFRYTTQYEVKRLGLTGYAKNLDDGSVEVVACGEEGQVEKLMQWLKSGGPRSARVERVLSEPHHPSGELTDFRIR 3072716..3073891 PHAGE_Strept_20617_NC_023503: methyltransferase; NCTC11111_03144; phage(gi588295144) 1.64e-32 EscherichiacoliMLAKGREKSLLRRHPWVFSGAVARMEGKASLGETIDIVDHQGKWLARGAYSPASQIRARVWTFDPSESIDIAFFSRRLQQAQKWRDWLAQKDGLDSYRLIAGESDGLPGITIDRFGNFLVLQLLSAGAEYQRAALISALQTLYPECAIYDRSDVAVRKKEGMELTQGLVTGELPPALLPIEEHGMKLLVDIQHGHKTGYYLDQRDSRLATRRYVENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIVMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSGLMTSDLFQKIIADAAIDAGRDVQFIEQFRQAADHPVIATYPEGLYLKGFACRVM 3073529..3073542 attR N/A CGTGATGATGTCTT #### region 6 #### 3225149..3225907 PHAGE_Escher_RCS47_NC_042128: DNA helicase; NCTC11111_03278; phage(gi100021) 1.73e-13 EscherichiacoliMETRREERIGQLLQELKRSDKLHLKDAAALLGVSEMTIRRDLNNHSAPVVLLGGYIVLEPRSASHYLLSDQKSRLVEEKRRAAKLAATLVEPDQTLFFDCGTTTPWIIEAIDNEIPFTAVCYSLNTFLALKEKPHCRAFLCGGEFHASNAIFKPIDFQQTLNNFCPDIAFYSAAGVHVSKGATCFNLEELPVKHWAMSMAQKHVLVVDHSKFGKVRPARMGDLKRFDIVVSDCCPEDEYVKYAQTQRIKLMY complement(3225954..3227156) PHAGE_Stx2_c_1717_NC_011357: penicillin-binding protein 6b; NCTC11111_03279; phage(gi209447203) 1.32e-127 EscherichiacoliMTQYSSLLRGLAAGSAFLFLFAPTAFAAEQTVEAPSVDARAWILMDYASGKVLAEGNADEKLDPASLTKIMTSYVVGQALKADKIKLTDMVTVGKDAWATGNPALRGSSVMFLKPGDQVSVADLNKGVIIQSGNDACIALADYVAGSQESFIGLMNGYAKKLGLTNTTFQTVHGLDAPGQFSTARDMALLGKALIHDVPEEYAIHKEKEFTFNKIRQPNRNRLLWSSNLNVDGMKTGTTAGAGYNLVASATQGDMRLISVVLGAKTDRIRFNESEKLLTWGFRFFETVTPIKPDATFVTQRVWFGDKSEVNLGAGEAGSVTIPRGQLKNLKASYTLTEPQLTAPLKKGQVVGTIDFQLNGKSIEQRPLIVMENVEEGGFFGRMWDFVMMKFHQWFGSWFS 3227403..3227540 glutathione S-transferase; NCTC11111_03280 N/A EscherichiacoliMITLWGRNNSTNVKKVLLTLEELELPYEQILAGREFGVTSRFFLG 3227753..3228163 PHAGE_Escher_pro483_NC_028943: tail fiber protein; NCTC11111_03281; phage(gi971758531) 5.54e-84 EscherichiacoliMPFARYFCIFINVGLGEAAKRDVGTGENQIPDMASFASGDGWMKLPNGKILQYGRGAVTPTLSTQTMRITFSIPFPKKVDCAMLTHSGDGGAPLGAGRGFVMTAEGPTLTGFNSAYRTASTSSTVSMNYSWWAVGE 3228184..3228627 PHAGE_Escher_pro483_NC_028943: tail fiber assembly protein; NCTC11111_03282; phage(gi971758532) 1.96e-104 EscherichiacoliMNEYVYSARHNAFFPVDMIDKYKSEGWNLSDAKEVNQNIISEFMAEPPQGKIRIAGDDGLPAWADIPPPTHEELIEITESERQLLINQANEYMNSKQWPGKAAIGRLKGEELAQYNLWLDYLDALELVDTSSAPDIEWPTPPAVQAR complement(3228599..3229201) PHAGE_Escher_pro483_NC_028943: putative tail fiber assembly protein; NCTC11111_03283; phage(gi971758533) 5.13e-128 EscherichiacoliMAQAKLNSELIATVAGNVTVFNYDSKTREYLSTSTEYLAVGVGIPAYSCLDAPGIHKAGYAICRSVNLNSWEYVPDHRGEIVYSTETRESKQITAPGDYPENTTTIAPLTPYDKWDGEKWVTDTEAQHGAAVEAAEAQRQSLIDAAMASISLIQLKLQAGRKLTQAETTRLNAVLDYIDAVTATDTSTAPDVIWPELPEA complement(3229201..3229971) PHAGE_Escher_pro483_NC_028943: tail fiber protein; NCTC11111_03284; phage(gi971758534) 2.44e-51 EscherichiacoliMQNLMPPINTPDQLFHDGDPTQGIEGTLVTAGYLNNQQGATRDLQQELLNVLGGAHIQPDPKKTDQLLTALRALLLSRKNPFGDIKLDGTVQKALENLGLGEGSALPVGVPVPWPSATPPTGWLKCNGAAFSAEEYPELAKAYPTNKLPDLRGEFIRGWDDGRGVDVGRAILSSQGDAIRNIIGKFGNTQLYPSIYCDGAFGVTVENVSQTLGLTLAPSGTGNGTVNFSFDASKIVPVATENRPRNVAFNFIVRAA complement(3229971..3230543) PHAGE_Mannhe_vB_MhM_3927AP2_NC_028766: tail protein; NCTC11111_03285; phage(gi971741548) 1.38e-35 EscherichiacoliMNTVDLFRAMLPPVSYDPNGKYISAELNAEAAIMDEVKASAARVLASVTPFYASMTLSDWERVYGVIPRDGATQQERRENILIKMAATGGLSIPYFKQLAASLGYTITITELHPFRAGINRCGDRLYITDARWIWQVNVTGSRTPAYRFRTGVSAAGEPLLSFGAPVLEETFKDLKPAFTYCHFTYKEEQ complement(3230547..3231473) PHAGE_Mannhe_vB_MhM_3927AP2_NC_028766: baseplate J protein; NCTC11111_03286; phage(gi971741547) 8.87e-87 EscherichiacoliMHQGWILRQVFPDTADPEYLELHCRTRNVFRKKATASSGPAVITGTPGKTLPAGAEIRGEGVSVATAADCTVGDEGSAEVTVKSTATGAQTNASTTQTATLVSPPEGINSTVTIKSLTGGTDRESDADLLARYLDILRRPPAGGNKYDYKRWALEVDGVTSAYVEPLRRGLGTVDVAITSANDLPSQELINAVLAHIEEVRPVTAKDTMVLAPTKKAVDFVVRVKTSGLTVEQIKPQITEVITDFMNRLEPGQELIISQLETQISLISGVSDRRIIMPSDNVKAVVNESTWEWLRPGSIDIQPFPRES complement(3231661..3231813) Uncharacterised protein; NCTC11111_03287 N/A EscherichiacoliMVLAERITHFYRQYGTHDGTVIELDTGKNVFVLENPDEVQRRIEQAQKDT complement(3231888..3232070) Uncharacterised protein; NCTC11111_03288 N/A EscherichiacoliMTRQHWTHRTPRKAARCVLALFLVMLLPVGCTDINRTGQLLDAAAQVCRIIDGIRQCSQN complement(3232067..3232612) PHAGE_Erwini_vB_EamP_S6_NC_019514: endolysin; NCTC11111_03289; phage(gi422935930) 2.34e-89 EscherichiacoliMKSKDKIFDEVLGKEGGYVNHPDDKGGPTKWGITEKVARAHGYRGDMRDLTREQALDILEADYWYGPRFDQVAALSPDIAAELCDTGVNMGPTVASRMLQRWLNVFNLRGRLYPDMDADGRIGPRTISALRAFLNNRGQDGERVMLTALNCTQGDRYLELAEKREANESFVYGWLKERVAI complement(3232596..3232892) PHAGE_Entero_phiP27_NC_003356: putative holin; NCTC11111_03290; phage(gi18249893) 2.41e-23 EscherichiacoliMESSLAGIVNVWLCLAIVLGLFVYRRHGAAHKPMITWLAYWLMLGYVIIPFRWLSGTYTHSSWLVVALNLVFCALIVWAHGNLSKILSLLRHPHEIKR complement(3232882..3233274) PHAGE_Entero_phiP27_NC_003356: putative holin; NCTC11111_03291; phage(gi18249892) 3.89e-45 EscherichiacoliMSEPLSGGGAVAVTIGGASVFGLLTNTDFGVVVGAFAGALFVVTQQKEIPVWRMAIHLLVAFVVGVLGAGVAASLMQWLTHYNDKPLDALCAVGVSALSIKILTFLYQQEISSLFGLFSRLRGGGGGNGK complement(3233463..3233750) Uncharacterised protein; NCTC11111_03292 N/A EscherichiacoliMMRSDTDIDYAVLGEYTAFSDKARDAARRRHAEMCSLSSYLAKQAQSPESVTNHDEVLSAVNRMIDAEREMRNAVERANLLARACYKPPLKLASL complement(3233778..3234245) PHAGE_Mannhe_vB_MhM_3927AP2_NC_028766: mor transcription activator family protein; NCTC11111_03293; phage(gi971741519) 2.15e-25 EscherichiacoliMQTFSETDLRDAQALLPDSVQQLISVIGFPALTRLIRSFGGVTLSGKTGVHAERTGGVHALLHDVLTEDEINKLIRFLGGAPFYIPRCDHALRALRNTRFMADLQQHVKGGCSHRQALALLCPRYGISDRYAWQLIHRRQKQTSLKSPTQVGLFD complement(3234345..3234683) PHAGE_Mannhe_vB_MhM_3927AP2_NC_028766: hypothetical protein; NCTC11111_03294; phage(gi971741516) 4.18e-16 EscherichiacoliMKKLLLLILTLCFTGISHASDSEEDLVKKTLQGDYQAQRNLAYSYMNGWDDISKDTIRGCALRKVILLTQAQADIGDYGNEAIDCRKVHPTDNQKVWEYVRGYLVLINENKK complement(3234680..3235075) PHAGE_Pseudo_D3112_NC_005178: hypothetical protein; NCTC11111_03295; phage(gi38229130) 2.56e-17 EscherichiacoliMLKKMIGAIKAGQAYLGWDDALYRQTLARLTGKTSTTRCNLDELRIIREYMHEQGFPRKAPAGKGRRPRVAMSRKSVLSKIEALLADAGRSWAYAEGLASHMYKQHVIEWLTDEQLFGVMVALVKDSRRRK complement(3235047..3235325) Uncharacterised protein; NCTC11111_03296 N/A EscherichiacoliMKIEQIGMAAFRQQAESGGVDEFVVQRFGGVYHLFAVNRRAGVSYFLQERRGDYKTWLSLDRAAAFLSGIGVSRFTVRFEDNKHAEKDDRGH complement(3235674..3236147) PROPHAGE_Escher_Sakai: phage transposase; NCTC11111_03297; phage(gi15834199) 1.73e-25 EscherichiacoliMFYSANELAGLPGLPGTVQGVRWTLNRITETHPEWKRKREGTKAFEYHIDCLPAEAQKVLRKRLTHQVLEDTQLPAVVEQKAVKNVAVRDELEVMVKCPELALREVQALTDKQKAIADARILLATEVHKLREYAGMTRKAALKHIVDGVRMSNIWGS complement(3236147..3236383) PHAGE_Haemop_SuMu_NC_019455: Mu-like prophage FluMu DNA-binding protein Ner; NCTC11111_03298; phage(gi418489037) 4.67e-17 EscherichiacoliMMVRNEVMNKDWHREYIVAAVHTKGFTLRELSERAGLKKDSLKNALYRSCPKYERIIADAIGVEPAEIWPSRYASKAA #### region 7 #### 3520870..3520886 attL N/A CAGCAGAACACATTAAG complement(3531552..3532097) PHAGE_Entero_DE3_NC_042057: RecA-like recombination protein; NCTC11111_03583; phage(gi100035) 3.70e-130 EscherichiacoliMEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKLRREVEELRQASEADLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAGEIASILDGLPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYIEQSG complement(3532845..3533051) PHAGE_Entero_DE3_NC_042057: membrane-associated initiation of head vertex; predicted; phage protein; NCTC11111_03584(gi100034) 6.10e-43 EscherichiacoliMNKEQSADDPSVDLIRVKNMLNSTISMSYPDVVIACIEHKVSLEAFRAIEAALVKHDNNMKDYSLVVD 3533337..3533747 PHAGE_Entero_DE3_NC_042057: replication and recombination DNA helicase; NCTC11111_03585; phage(gi100033) 2.18e-95 EscherichiacoliMAQVAIFKEIFDQVRKDLNCELFYSELKRHNVSHYIYYLATDNIHIVLENDNTVLIKGLKKVVNVKFSRNTHLIETSYDRLKSREITFQQYRENLAKAGVFRWVTNIHEHKRYYYAFDNSLLFTESIQNTTQIFPR 3534039..3534332 PHAGE_Entero_DE3_NC_042057: hypothetical protein; NCTC11111_03586; phage(gi100032) 3.22e-64 EscherichiacoliMKKMLLATALALLITGCAQQTFTVQNKPAAVTPKETITHHFFVSGIGQKKTVDAAKICGGAENVVKTETQQTFVNGLLGFITLGIYTPLEARVYCSQ complement(3534364..3534825) PHAGE_Entero_DE3_NC_042057: hypothetical protein; NCTC11111_03587; phage(gi100031) 1.78e-106 EscherichiacoliMSRITAIISALLICIIVCLSWAVNHYRDNAITYKAQRDKNARELKLANVAITDMQMRQRDVAALDAKYTKELADAKAENDALRDDVAAGRRRLHIKAVCQSVREATTASGVDNAASPRLADTAERDYFTLRERLITMQKQLEGTQKYINEQCR complement(3534822..3535298) PHAGE_Entero_c_1_NC_019706: lysozyme; NCTC11111_03588; phage(gi428781798) 2.07e-109 EscherichiacoliMQNLNPQRKAFLDMLAWSEGTDNGRQPTRNHGYDVIVGGELFTDYSDHPRKLVTLHPKLKSTAAGRYQLLSRWWDAYRKQLGLKDFSPKSQDAVALQQIKERGALPMIDRGDIRQAIDRCSNIWASLPGAGYGQFEHKADSLIAKFKEAGGTVRESEV complement(3535285..3535590) PHAGE_Salmon_ST64T_NC_004348: holin protein; NCTC11111_03589; phage(gi24371577) 2.22e-47 EscherichiacoliMHEKESLAGAFWLVLLIIAGWGGLVRYLIDVKQSKATWSWINALAQIVVSGFTGVIGGLISIESGFSIYMILATAGISGAMGSVALTYFWERLTGVKNAKS complement(3535912..3536397) PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage antiterminator protein Q; NCTC11111_03590; phage(gi169257244) 2.97e-55 EscherichiacoliMPRCRYSRPRKLADAVQVTSSWRRAVLSLEEHQKAWLLWSYSESVRWEHQVTITQWAWSEFKTLLGTKKIAGKTLERLKKLIWLAAQDVKNELAGGKTYEYQELASLVGVTSKNWSETFTERWVAMKHIFLQLDSQALLLLTKTRSKQKTTFSQQDIAKLD 3536546..3536842 PHAGE_Escher_PA28_NC_041935: DNA helicase; NCTC11111_03591; phage(gi100021) 4.29e-67 EscherichiacoliMNAYYIQDRLEAQSWARHYQQIAREEKEAELADDMEKGLPQHLFESLCIDHLQRHGASKKAITRAFDDDVEFQERMAEHIRYMVETIAHHQVDIDSEV 3536848..3537633 PHAGE_Entero_933W_NC_000924: Bet protein; NCTC11111_03592; phage(gi9632480) 0.0 EscherichiacoliMSTALATLAGKLAERVGMDSVDPQELITTLRQTAFKGDASDAQFIALLIVANQYGLNPWTKEIYAFPDKQNGIVPVVGVDGWSRIINENQQFDGMDFEQDNESCTCRIYRKDRNHPICVTEWMDECRREPFKTREGREITGPWQSHPKRMLRHKAMIQCARLAFGFAGIYDKDEAERIVENTAYTAERQPERDITPVNDETMQEINTLLIALDKTWDDDLLPLCSQIFRRDIRASSELTQAEAVKALGFLKQKATEQKVAA 3537630..3538310 PHAGE_Stx2_c_1717_NC_011357: exonuclease; NCTC11111_03593; phage(gi209447136) 5.00e-171 EscherichiacoliMTPDIILQRTGIDVRAVEQGDDAWHKLRLGVITASEVHNVIAKPRSGKKWPDMKMSYFHTLLAEVCTGVAPEVNAKALAWGKQYENDARTLFEFTSGVNVTESPIIYRDESMRTACSPDGLCSDGNGLELKCPFTSRDFMKFRLGGFEAIKSAYMAQVQYSMWVTRKDAWYFANYDPRMKREGLHYVVVERDEKYMASFDEMVPEFIEKMDEALAEIGFVFGEQWR 3538307..3538489 PHAGE_Entero_DE3_NC_042057: hypothetical protein; NCTC11111_03594; phage(gi100011) 2.51e-38 EscherichiacoliMTHPHDNIRVGAITFVYSVTKRGWVFPGLSVIQNPLKAQRLAEEINNKRGAVCTKHLLLS 3538462..3538653 PHAGE_Escher_PA28_NC_041935: exonuclease A; NCTC11111_03595; phage(gi100018) 2.77e-38 EscherichiacoliMHKASPVELRTSIEMAHSLAQIGVRFVPIPVETDEEFHTLATSLSQKLEMMVAKAEADERDQV 3538730..3538945 PHAGE_Escher_PA28_NC_041935: hypothetical protein; NCTC11111_03596; phage(gi100017) 6.50e-45 EscherichiacoliMTPQQENALRSIARQANYEIKKARQQFPDKNVNDICRSVLKKHRETVTLKGFTPTHLSLAIGMLNGVFKER 3539265..3539597 PHAGE_Entero_ST104_NC_005841: ORF6; NCTC11111_03597; phage(gi46358654) 1.08e-62 EscherichiacoliMANLQLAVKSEYFDAMIRGEKTEEYRLCNDYWNKRIMFREYDRLIITKGYPKRDDSSRRIDVPYDGYEVKTITHPHFGDKPVKVFAIKVNITTEYQSAQHKVKNVQSDLP 3539575..3539853 PHAGE_Entero_SfI_NC_027339: hypothetical protein; NCTC11111_03598; phage(gi849250253) 7.38e-58 EscherichiacoliMFRVIYPNTWYVDHHGTPCKILRSTHNKVHYIRKGRTCIASMFRFNHDFEPVSKVESERIAEEIDTAEHIKKLRAMRSKSRGNHGIIQPHTR 3539771..3539787 attR N/A CAGCAGAACACATTAAG 3540052..3541215 PHAGE_Shigel_Stx_NC_029120: integrase; NCTC11111_03599; phage(gi985761248) 0.0 EscherichiacoliMSLFRRNEIWYASYSLPGGKRIKESLGTKDKRQAQELHDKRKAELWRVEKLRDLPDVTFEEACLRWLEEKADKKSLDSDKSRIEFWLEHFEGIRLKDISEAKIYSAVSRMHNRKTKEIWKQKVQAAIRKGKELPVYEPKPVSTQTKAKHLAMIKAILRAAERDWKWLEKAPVIKIPAVRNKRVRWLEKEEAKRLIDECPEPLKSVVKFALATGLRKSNIINLEWQQIDMQRRVAWVNPEESKSNRAIGVALNDTACKVLRDQIGKHHKWVFVHTKAAKRADGTSTPAVRKMRIDSKTSWLSACRRAGIEDFRFHDLRHTWASWLIQSGVPLSVLQEMGGWESIEMVRRYAHLAPNHLTEHARKIDDIFGDNVPNMSHSGIMEDIKKA #### region 8 #### 3896733..3896744 attL N/A AGGCAGAACATG complement(3901377..3902099) PHAGE_Entero_BP_4795_NC_004813: putative replication protein P; NCTC11111_03910; phage(gi157166012) 4.56e-159 EscherichiacoliMKNIAAQMINFDREQMRRIANNMPEQYDEKPQVQQVAQIINGVFSQLLATFPASLANRDQNELNEIRRQWVLAFRENGIATMEQVNAGMRVARRQNRPFLPSPGQFVAWCREEASVTAGLPNVSELVDMVYEYCRKRGLYPDAESYPWKSNAHYWLVTNLYQNMRANALTDSELRRKAADELAHMTARINRGEAIPEPVKQLPVIGGKPLSRIQGLAKLAEIREKHGLRRRKQLTGVKLT complement(3902096..3903100) PHAGE_Entero_BP_4795_NC_004813: putative replication protein O; NCTC11111_03911; phage(gi157166011) 4.80e-144 EscherichiacoliMAKAGLREQSRLSGANRNALIAGGIMANTAEIFNFPVPDVAQKEPRVADLDDGYTRIANELLEAVMLAGLTQHQLLVFLAVMRKTYGFNKKLDWVSNEQLSELTGILPHKCSAAKSVLVKRGILIQSGRNTGINNVVSEWSTLPESGKKNKVYLKEVNLPESGKKSLPKSGKDVYPNQVNTKDKLTKDNIKPYSSENSGESSDQPENDLPVVKPDAAIQSGSKWGTAEDLTAAEWMFDMVKTIAPSARKPNFAGWANDIRLMRERDGRNHRDMCVLFRWACQDNFWSGNVLSPAKLRDKWTQLEINRNKQQAGVTASKPKLDLTNTDWIYGVDL complement(3903112..3903651) PHAGE_Entero_phi80_NC_021190: CII decision making protein; NCTC11111_03912; phage(gi824479625) 3.94e-84 EscherichiacoliMQPLTYQQTSGFSPTAVINRSQIKQAPDHEKIRDAVRAWSAVDNQDVVAALIVNEYREQGDGTIDFPDDVSRARQKLFRFLDNKFDSEKYRNNVRELTPAILAVLPLEYRGYLVEQDSFMTRLAEMEKELSEAKQAVILNAPRHQKLKEISEGIVSMFRVDPDLAGPLMAMVTTMLGAI complement(3903682..3903909) PHAGE_Salmon_BTP1_NC_042346: clamp-loader subunit; NCTC11111_03913; phage(gi100040) 5.69e-31 EscherichiacoliMTNQTIQLAISITGSQKRLADLCGVAQPTVWRWLHGGGIDARYVMKIVSATGGKIKPADIRPDLAPLFNASNSAA 3904227..3904712 PHAGE_Salmon_BTP1_NC_042346: RegA; NCTC11111_03914; phage(gi100039) 4.67e-96 EscherichiacoliMRNDGQQSGKPAVSHSKYFKIDVLDIEVSAGPGVINREFVEVLRSVEYSFDDARHMFDGRKAENIRIINVRGDSMSGTIEPGDLLFVDITVKSFDGDGIYAFLYDDTAHVKRLQMMKDKLLVISDNKSYSPWDPIEKDEMNRVFIFGKVIGSMPQTYRKHG 3904806..3905831 Uncharacterised protein; NCTC11111_03915 N/A EscherichiacoliMVDSMNSENSSSVNKKHNKPKQVKLRAFKIENNNLTEKSSPAKKLLLQKLVDSSTVKERCMVLNSDDLRQEQDLISFYQTSDNSNSVFCTMVRIAPSEGVEKIPDQLFNKKSFTISDLHNADIDTEVVCKNHFYFCISDNYLVTNLQMNRTISSLQTYIRWLVGNEMIEFTPMIVKGNKVQLKDIKSISVRDPSPLPKEVLVQSSDMKSPPSEIEEKNTKIKLSHAVLNALKSAVPNFPNLKEIIDNQIVSAELLIKFSKPRSMDEDSYAKLLGATLKPVSDLDNIVFKRSDGRSEIKGKDLLKIKNVTIEVTDSGKLVEQEVFQEMSRYLKEIENEATNS 3905812..3906261 Uncharacterised protein; NCTC11111_03916 N/A EscherichiacoliMKRQIASLLIVLIITIGLPSFLAWRPDQFLISTLYSVCGIMFSIGLGLIVTFNMSGIKNINYVKVIRKELVSIRNSFLRFFTLSTLCLVLSEYLKEYEFSFEFKSLILKFSPSILFFTLIIYAIVFFIVNFLNVQKLSHDIFDKINQEQ 3906734..3906940 PHAGE_Entero_HK225_NC_019717: Kil protein; NCTC11111_03917; phage(gi428782413) 9.87e-36 EscherichiacoliMVHQHYGTQTVNRGAVMPGMLVKRKDGTWTASANLRGRLYLHRGIERTYTRDLLVEVFLDGRGNGLNH 3907016..3907312 PHAGE_Entero_BP_4795_NC_004813: putative host-nuclease inhibitor protein Gam; NCTC11111_03918; phage(gi157165999) 2.19e-66 EscherichiacoliMNAYYIQDRLEAQSWARHYQQIAREEKEAELADDMEKGLPQHLFESLCIDHLQRHGASKKAITRAFDDDVEFQERMAEHIQYMVETIAHHQVDIDSEV 3907318..3908103 PHAGE_Entero_BP_4795_NC_004813: putative Bet protein; NCTC11111_03919; phage(gi157165998) 0.0 EscherichiacoliMSTALATLAGKLAERVGMDSVDPQELITTLRQTAFKGDASDAQFIALLIVANQYGLNPWTKEIYAFPDKQNGIVPVVGVDGWSRIINENQQFDGMDFEQDNESCTCRIYRKDRNHPICVTEWMDECRREPFKTREGREITGPWQSHPKRMLRHKAMIQCARLAFGFAGIYDKDEAERIVENTAYTAERQPERDITPVNDETMQEINTLLIALDKTWDDDLLPLCSQIFRRDIRASSELTQAEAVKALGFLKQKATEQKVAA 3908100..3908780 PHAGE_Entero_BP_4795_NC_004813: putative exonuclease; NCTC11111_03920; phage(gi157165997) 4.69e-169 EscherichiacoliMTPDIILQRTGIDVRAVEQGDDAWHKLRLGVITASEVHNVIAKPRSGKKWPDMKMSYFHTLLAEVCTGVTPEVNAKALAWGKQYENDARTLFEFTSGVNVTESPIIYRDESMRTACSPDGLCSDGNGLELKCPFTSRDFMKFRLGGFEAIKSAYMAQVQYSMWVTRKDAWYFANYDPRMKREGLHYVVIERNEKYMASFDEMVPEFIEKMDEALAEIGFVFGEQWR 3908777..3908959 PHAGE_Entero_DE3_NC_042057: hypothetical protein; NCTC11111_03921; phage(gi100011) 3.56e-38 EscherichiacoliMTHPHDNIRVGAITFVYSVTKRGWVFPGLSVTRNPLKAQRLAEEINNKRGAVCTKHLLLS 3908932..3909123 PHAGE_Entero_BP_4795_NC_004813: hypothetical protein; NCTC11111_03922; phage(gi157165995) 7.36e-39 EscherichiacoliMHKASPVELRTSIEMAHSLAQIGVRFVPIPVETDEEFHTLAASLSQKLEMMVAKAEADERDQV 3909200..3909415 PHAGE_Entero_BP_4795_NC_004813: hypothetical protein; NCTC11111_03923; phage(gi157165994) 1.54e-47 EscherichiacoliMTPQQENALRSIARQANSEIKKARQQFPDKNVDDICRSVLKKHRETVTLMGFTPTHLSLAIGMLNGVFKER 3909514..3909732 PHAGE_Entero_BP_4795_NC_004813: DksA-like zinc finger domain containing protein; NCTC11111_03924; phage(gi157165993) 4.98e-41 EscherichiacoliMADIIDSASEIEELQRNTAIKMRRLNHQVISATHCCECGDPIDERRRLAVQGCRTCASCQEEIELKNKQWGL 3909780..3910058 PHAGE_Entero_SfI_NC_027339: hypothetical protein; NCTC11111_03925; phage(gi849250253) 1.41e-62 EscherichiacoliMFRIIFPNTWYVDHHGTPCKILRSTHNKVHYIRKGRTCIASMFRFNHDFEPVNKADADRIAEEIETAEHIKKLRDMRSKSRGNHGIIQPHTR 3909881..3909892 attR N/A AGGCAGAACATG 3910257..3911420 PHAGE_Shigel_SfIV_NC_022749: integrase; NCTC11111_03926; phage(gi557307554) 0.0 EscherichiacoliMSLFRRGEIWYASFTLPNGKRFKQSLGTKDKRQATELHDKLKAEAWRVSKLGEIPDITFEEACVRWLEEKAHKKSLDDDKSRIGFWLQHFAGMQLRDITESKIYSAMQKMTNRRNEENWKLRAEACRKKGKPVPEYKPKPASVATKATHLSFIKALLRAAEREWKMLDKAPIIKVPQPKNKRIRWLEPHEAQRLIDECPEPLKSVVEFALATGLRRSNIINLEWQQIDMQRRVAWINPEESKSNRAIGVALNDTACRVLKKQIGNHHRWVFVYKESCTKPDGTKAPTVRKMRYDANTAWKAALRRAGIDDFRFHDLRHTWASWLVQAGVPLSVLQEMGGWESIEMVRRYAHLAPNHLTEHARQIDSILNPSVPNLSQSKNKEGTNDV #### region 9 #### 4216837..4216862 attL N/A CGGATGCGGCGTGAACGCCTTATCCG 4222230..4222478 PHAGE_Entero_mEp460_NC_019716: DinI-like protein; NCTC11111_04221; phage(gi428782337) 3.04e-53 EscherichiacoliMRIEICIAKEKMTKMPNGAVDALKEELTRRISKRYDDVEVIVKATSNDGLSVTRTADKDSAKTFVQETLKDTWESADEWFVH 4223087..4223320 PHAGE_Salmon_118970_sal3_NC_031940: base plate hub; NCTC11111_04222; phage(gi100103) 8.68e-06 EscherichiacoliMKSKDTLKWFPAQLPEVRIILGDAVVEVAKQGRPINTRTLLDYIEGNIKKKSWLDNKELLQTAISVLKDNQNLNGKV 4223701..4224291 PHAGE_Entero_Mu_NC_000929: Gin; NCTC11111_04223; phage(gi9633542) 3.18e-29 EscherichiacoliMSRIFAYCRISTLDQTTENQRREIESAGFKIKPQQIIEEHISGSAATSERPGFNRLLARLKCGDQLIVTKLDRLGCNAMDIRKTVEQLTETGIRVHCLALGGIDLTSPTGKMMMQVISAVAEFERDLLLERTHSGIVRARGAGKRFGRPPVLNEEQKQVVFERIKSGVSISAIAREFKTSRQTILRAKAKLQTPDI complement(4224964..4228317) PHAGE_Entero_9g_NC_024146: side tail fiber; NCTC11111_04225; phage(gi640885143) 0.0 EscherichiacoliMAVKISGVLKDGTGKPVQNCTIQLKAKRNSTTVVVNTLASENPDEAGRYSMDVEYGQYSVILLVEGFPPSHAGTITVYEDSQPGTLNDFLGAMTEDDTRPEALRRFELMVEEVARNASAVAQNTAAAKKSASNASTSAREAATHATDAAGSARAASTSAGQAASSAQSASSSAGTASAKATEASKSAAAAESSKSAAATSAGAAKTSETNAAASQQSAATSASTATTKASEAATSARDASASKEAAKSSETNAASSASSAASSATAAGNSAKAAKTSETNARSSETAAGQSASAAAGSKTAAASSASAASTSAGQASVSATAAGKSAESAASSASTATTKAGEATEQATAAARSASAAKTSETNAKASETRAESSKTAAASSASSAASSASSASASKDEATRQASAAKGSATTASTKATEAAGSATAAAQSKSTAESAATRAETAAKRAEDIASAVALEDASTTKKGIVQLSSATNSTSETLAATPKAVKSAYDNAEKRLQKDQNGADIPDKGRFLNNINAVSKTDFADKRGMRYVRVNAPAGATSGKYYPVVVMRSAGSVSELASRVIITTATRTAGDPMNNCEFNGFVMPGGWTDRGRYAYGMFWQYQNNERAIHSIMMSNKGDDLRSVFYVDGAAFPVFAFIEDGLSISAPGADLVVNDTTYKFGATNPATECIAADVILDFKSGRGFYESHSLIVNDNLSCKKLFATDEIVARGGNQIRMIGGEYGALWRNDGAKTYLLLTNQGDVYGGWNTLRPFAIDNATGELVIGTKLSASLNGNALTATKLQTPRRVSGVEFDGSKDITLTAAHVAAFARRATDTYADADGGVPWNAESGAYNVTRSGDSYILVNFYTGVGSCRTLQMKAHYRNGGLFYRSSRDGYGFEEDWAEVYTSKNLPPESYPVGAPIPWPSDTVPSGYALMQGQTFDKSAYPKLAAAYPSGVIPDMRSWTIKGKPASGRAVLSQEQDGIKSHTHSASASSTDLGTKTTSSFDYGTKSTNNTGAHTHSVSGTAASAGNHTHSVTGASAVSQWSQNGSVHKVVSAASVNTSAAGAHTHSVSGTAASAGAHAHTVGIGAHTHSVAIGSHGHTITVNAAGNAENTVKNIAFNYIVRLA complement(4228382..4230292) PHAGE_Entero_mEp460_NC_019716: terminase large subunit; NCTC11111_04226; phage(gi428782318) 0.0 EscherichiacoliMLNQETAKAARTDSGYILRAPRRMRVADAVAQYMRVPMGAGNSVPWDPLVAPYVIEPMNCLASREYDAVIFVGPARTGKTIGLIDGWVIYNVICDPADMLIIQMTEEKAREHSKKRLARTFRVSPEVVSRLSPNKNDNNVYDRTFLAGNYLKIGWPSVNIMSSSDYKCVALTDYDRFPEDIDGEGDAFSLASKRTTTFMSSGMTLVESSPGRDVKDVKWRRTSPHEAPPTTGILSLYNRGDRRRWYWPCPHCGEYFQPCGDVVAGFRDIADPVLASEAAYIQCPSCSGRIMPEQKRELNGRGVWLRDGESINADGSRYGDPRRSRIASFWMEGPAAAYQTLSQLVYKLLAAEQEYETTGSEETLKTVINTDWGLPYLPRASMEQRKSELLEQRAEPVPSRSVPDGVNFLVATVDVQAGRHRRFVVQVTGYGSRGERWIIDRYNITQSLRGDSDGESQRIDPASYPEDWDVLLTDVFHKSWPLASDPSQQMRLMAMAVDSGGEDGVTDNAYKFWRRCRRDGLGKRIYLFKGDSIRRAKLITRIRVNEWFSAYAMAGVAYSRVSTFSGDYLRVTDNKGKTHDVLTGSDDGRHSNTSLAWGAGVQFNPTESVAIDIAYEGSGSGDWRTDGFIVGVGYKF complement(4230292..4230783) PHAGE_Entero_mEp460_NC_019716: terminase small subunit; terminase,; phage small subunit; NCTC11111_04227(gi428782317) 3.19e-89 EscherichiacoliMDHELKNLVLNINQLAALSGLHRQTVVARLKNIRPAGGHDKLKLYRLTDILTEFMGLPPPVAEGEMDPHERKAWYQSERERLKFEQETAQLIPASDVRREFAIWAKAVVQVLETLPDILERDCGLQPAAVSRVQSIIDDLRDQIALRVTEAGADDEEELQQEE complement(4231336..4231542) PHAGE_Entero_DE3_NC_042057: membrane-associated initiation of head vertex; predicted; phage protein; NCTC11111_04228(gi100034) 4.29e-33 EscherichiacoliMHKDQYTDAPSQEQVRVKTMLNSTISMGYPDVVIACIEHQVSLEAFRAIEAALVKHDKNTKDYSLVVD complement(4231838..4232011) GnsA/GnsB family transcriptional regulator; NCTC11111_04229 N/A EscherichiacoliMNIEELKTKTEADISEYITKKIIELKKKTGKEVTSIQFTAREKMTGLESYDIKIDLI complement(4233262..4233759) PROPHAGE_Salmon_LT2: phage-tail assembly-like protein; NCTC11111_04231; phage(gi16765210) 3.17e-62 EscherichiacoliMNQIFTVILLVLVGFVVGNVWSDRGWQKKWAERDAAELSQEVNVQFAARIIEQGRTISRDEAVKDAQQKAAEISARAADLSDSVNQLRAEATKYAIRLDAAQHTANLAAAVRGKTTKAAEGMLTNMLGDIAAEAQLYAEIADKRYIAGVTCQRIYESLRDKKYQM complement(4233756..4234289) PHAGE_Entero_mEp460_NC_019716: endolysin; NCTC11111_04232; phage(gi428782372) 1.15e-121 EscherichiacoliMNVKIRYSLSAAVLALIAASAPAPDILDQFLDEKEGNHTTAYRDGSGIWTICRGATMVDGKPVIPGMKLSKEKCAQVNAIERDKALAWVERNIKVPLTEPQKAGIASFCPYNIGPGKCFPSTFYKRLNAGDRKGACEAIRWWIKDGGRDCRIRSNNCYGQVIRRDQESALTCWGIEH 4234403..4234663 Uncharacterised protein; NCTC11111_04233 N/A EscherichiacoliMDYTNLPKQTFADLIALRQAVVALINLLPEKEKELVKALLNRTAADFSSYPLTDDLADLPELIAASAIKLTEEIYPPQKSSQNSCE complement(4234611..4235162) PHAGE_Entero_mEp460_NC_019716: hypothetical protein; NCTC11111_04234; phage(gi428782371) 2.48e-45 EscherichiacoliMTQDYELVVKGVRNFENKVAVTVALRDKKRFDGEIFDLDISLDRVEGAALEFYEAAARMRIRQVFLDVAAGLCVGDEQSPEKRPIILEAQNVWITYKGKLPGRITGSLKTPPTALRSEKDDIESPIEKLEGSVADLNKKLSVLIPSEDEKKRRDEQFAAFYDYCIEVTRRNFVKIFEEGKSLQ complement(4235167..4235373) PHAGE_Entero_mEp460_NC_019716: porin; NCTC11111_04235; phage(gi428782370) 1.92e-38 EscherichiacoliMDKLTTGIAYGTSAGNAGFWALQLLDKVTPSQWAAIGVLGSLVFGLLTYLTNLYFKIKEDRRKVARRE 4236651..4236863 cold shock-like protein CspF; NCTC11111_04237 N/A EscherichiacoliMSRKMTGIVKTFDGKSGKGLITPSDGRIDVQLHVSALNLRDAEEITTGLRVEFCRINGLRGPSAANVYLS 4237495..4238112 PHAGE_Entero_mEp460_NC_019716: hypothetical protein; NCTC11111_04238; phage(gi428782350) 7.87e-137 EscherichiacoliMKPGPFFIQDNTFIDADNMRAVSVLNLGTIDEPGHADNTATLKLKKTAPFSALLSVNGERNSQKSLAEWIEDWADYLVGFDANGDAIQATKAAAAVRKITIEANQTADFEDNDFSGKRSLMESVEAKTKDIMPVAFEIKCVPFEGLKERPFKLRLSIITGDRPVLVLRIIQLEAVQEDMANEFRDLLVEKFKDSKVETFIGTFTA 4238240..4238776 PHAGE_Entero_mEp460_NC_019716: hypothetical protein; NCTC11111_04239; phage(gi428782349) 1.02e-130 EscherichiacoliMSFIKTFSGKHFYYDKINKDDIVINDIAVSLSNICRFAGHLSHFYSVAQHAVLCSQLVPQEFAFEALMHDATEAYCQDIPAPLKRLLPDYKRMEEKIDAVIREKYGLPPVMSTPVKYADLIMLATERRDLGLDDGSFWPVLEGIPATEMFNVIPLAPSHAYGMFMERFNELSELRKCA 4238767..4239129 PHAGE_Entero_mEp460_NC_019716: hypothetical protein; NCTC11111_04240; phage(gi428782348) 8.88e-82 EscherichiacoliMRMNVFEMEGFLRGKCVPRDLKVNETNAEYLVRKFDALEAKCAALENKIIPVSAELPPANESVLLFDANGEGWLIGWRSLWYTWGQKETGEWQWTFQVGDLENFNITHWAVMPKAPEAGA 4239129..4239749 PHAGE_Entero_cdtI_NC_009514: Valyl-tRNA synthetase; NCTC11111_04241; phage(gi148609417) 7.40e-136 EscherichiacoliMTTFTNKELIKEIKERISSLEVRDDIERRAYEIALASLEEEPVAWLHSENGLGIPAITRSKNIADSWLSKGWYVQPLYIAKPVPVVPDARPSLNNGIVGFDEGWNACRAAMLNGAEPVSQTYKLNELSGNSPVTPDGWISCSERMPNDKQYVWCWGKSYGWTEYDTFEGYYDCSRNKWWAVTDNGEEPASKVTHWMPLPEPPQEVK complement(4240226..4240945) Uncharacterised protein; NCTC11111_04242 N/A EscherichiacoliMSKLKNEPLVRVSEEDGIEIRKIQYPDNTIERVYKQKGVILPRIPLKGRFVEQYVALQLLDKDLRNVIGWENIIKNICNNINREQHFIYPDLEKNLILKSLFISKVVTYGKCFTEAKGRRFTLQRKHVPEKYRDLHDSIMNVRHNFAAHKGEFEYDQCGLVLILPGTKKKRCYHIFSELNQINYGNNEEDDERFFMLYDSLRKVIKEKRDKLIDKIYAEKIHTQTMEYWLSRTGKETEI complement(4241231..4242454) PHAGE_Entero_cdtI_NC_009514: Phage integrase; NCTC11111_04243; phage(gi148609414) 0.0 EscherichiacoliMALSDAWLRSVVGKERDKVLVKSDRDGLSVRVSPKGRVVFQYRYQWAGKGERLDIGTYPATGLKEAREEVIRLRGELESNRNPRLVKQAEKRKATEAMTVESVIRAWYEAYCVKNKKGSEQILRSFELHLFSKIGNIPHDAATLHDWLEVLEPLSTKTPAIADRLLINAKQAHVWAYKRKLIETRPLSDITGKDMDIRKGQKKRFLTHDEIKILYAAIDGSRMVPKYRAFIKLLLHFGCRSSELITARVGDFDFINKVWTVPPERHKTGDITGEPLKRPIIEPVEELIKYVISMNNGSDMLFTKEGSREPVGRTSLQSLPYNLMQYAWRRLGYQFPHWSLHDLRRTARTNFSDLTAPHIAEIMLGHKLPGVWQVYDKSDYLEEQRKAYLAWWKRVESIVNCTISDSN complement(4242840..4243517) PHAGE_Strept_VWB_NC_005345: hypothetical protein; NCTC11111_04244; phage(gi41057269) 1.71e-06 EscherichiacoliMKWDWIFFDADETLFTFDSFTGLQRMFLDYSVTFTAEDFQDYQAVNKPLWVDYQNGAITSLQLQHGRFESWAERLKVEAGLLNDAFINAMAEICTPLPGAVSLLNAIRGNAKIGIITNGFSALQQVRLERTGLRDYFDLLVISEEVGVAKPNKKIFDYALEQAGNPDRSRVLMVGDTAESDILGGINAGLATCWLNAHNREQPEGIAPTWTVSSLHELEQLLCKH complement(4243532..4243978) PHAGE_Pseudo_vB_PaeS_PAO1_Ab18_NC_026594: hypothetical protein; NCTC11111_04245; phage(gi764160510) 3.71e-05 EscherichiacoliMNTISSLETTDLPAAYHIEQRAHAFPWSEKTFASNQGERYLNFQLTQNGKMAAFAITQVVLDEATLFNIAVDPDYQRQGLGRALLEHLIDELEKRGVATLWLEVRASNAAAIALYESLGFNEATIRRNYYPTTDGREDAIIMALPISM 4245525..4245550 attR N/A CGGATGCGGCGTGAACGCCTTATCCG