Criteria for scoring prophage regions (as intact, questionable, or incomplete): Method 1: 1. If the number of certain phage organism in this table is more than or equal to 100% of the total number of CDS of the region, the region is marked with total score 150. If less than 100%, method 2 and 3 will be used. Method 2: 1. If the number of certain phage organism in this table is more than 50% of the total number of CDS of the region, that phage organism is considered as the major potential phage for that region; the percentage of the total number of that phage organism in this table in the total number of proteins of the region is calculated and then multipled by 100; the percentage of the length of that phage organism in this table in the length of the region is calculated and then multipled by 50 (phage head's encapsulation capability is considered). Method 3: 1. If any of the specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin') are present, the score will be increased by 10 for each keyword found. 2. If the size of the region is greater than 30 Kb, the score will be increased by 10. 3. If there are at least 40 proteins in the region, the score will be increased by 10. 4. If all of the phage-related proteins and hypothetical proteins constitute more than 70% of the total number of proteins in the region, the score will be increased by 10. Compared the total score of method 2 with the total score of method 3, the bigger one is chosen as the total score of the region. If the region's total score is less than 70, it is marked as incomplete; if between 70 to 90, it is marked as questionable; if greater than 90, it is marked as intact. Totally 9 intact prophage regions have been identified. REGION REGION_LENGTH COMPLETENESS(score) SPECIFIC_KEYWORD REGION_POSITION TRNA_NUM TOTAL_PROTEIN_NUM PHAGE_HIT_PROTEIN_NUM HYPOTHETICAL_PROTEIN_NUM PHAGE+HYPO_PROTEIN_PERCENTAGE BACTERIAL_PROTEIN_NUM ATT_SITE_SHOWUP PHAGE_SPECIES_NUM MOST_COMMON_PHAGE_NAME(hit_genes_count) FIRST_MOST_COMMON_PHAGE_NUM FIRST_MOST_COMMON_PHAGE_PERCENTAGE GC_PERCENTAGE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1 19.7Kb intact(150) tail,transposase 263-20050 0 24 23 0 95.8% 1 no 11 PHAGE_Entero_mEp460_NC_019716(8),PHAGE_Entero_cdtI_NC_009514(7),PHAGE_Entero_DE3_NC_042057(4),PHAGE_Entero_lambda_NC_001416(4),PHAGE_Entero_YYZ_2008_NC_011356(4),PHAGE_Entero_HK630_NC_019723(4),PHAGE_Entero_BP_4795_NC_004813(3),PHAGE_Entero_HK629_NC_019711(3),PHAGE_Stx2_c_1717_NC_011357(3),PHAGE_Escher_Av_05_NC_025830(2),PHAGE_Phage_Gifsy_2_NC_010393(2),PHAGE_Phage_Gifsy_1_NC_010392(2),PHAGE_Entero_phiP27_NC_003356(2),PHAGE_Entero_fiAA91_ss_NC_022750(2),PHAGE_Shigel_Sf6_NC_005344(1),PHAGE_Entero_P1_NC_005856(1),PHAGE_Escher_RCS47_NC_042128(1),PHAGE_Shigel_SfIV_NC_022749(1),PHAGE_Entero_Mu_NC_000929(1),PHAGE_Yersin_L_413C_NC_004745(1),PHAGE_Thermu_OH2_NC_021784(1),PHAGE_Salmon_Fels_1_NC_010391(1),PHAGE_Shigel_SfII_NC_021857(1),PHAGE_Bacill_PfEFR_5_NC_031055(1),PHAGE_Bacill_phIS3501_NC_019502(1),PHAGE_Bacill_phiCM3_NC_023599(1),PHAGE_Entero_SfMu_NC_027382(1) 11 33.33% 52.88% 2 50Kb intact(150) integrase,transposase,lysin,terminase,portal,head,tail,plate 45322-95397 4 70 60 0 85.7% 10 yes 31 PHAGE_Salmon_SEN34_NC_028699(22),PHAGE_Psychr_pOW20_A_NC_020841(8),PHAGE_Shigel_POCJ13_NC_025434(5),PHAGE_Entero_P1_NC_005856(5),PHAGE_Aggreg_S1249_NC_013597(5),PHAGE_Haemop_Aaphi23_NC_004827(4),PHAGE_Phage_Gifsy_1_NC_010392(4),PHAGE_Escher_RCS47_NC_042128(4),PHAGE_Entero_phiP27_NC_003356(4),PHAGE_Salmon_BP63_NC_031250(4),PHAGE_Shigel_Stx_NC_029120(4),PHAGE_Escher_Av_05_NC_025830(3),PHAGE_Escher_HK75_NC_016160(3),PHAGE_Entero_HK225_NC_019717(3),PHAGE_Phage_Gifsy_2_NC_010393(3),PHAGE_Klebsi_vB_KpnM_KpV79_NC_042041(3),PHAGE_Entero_cdtI_NC_009514(3),PHAGE_Stx2_vB_EcoP_24B_NC_027984(3),PHAGE_Entero_Min27_NC_010237(3),PHAGE_Shigel_SfIV_NC_022749(3),PHAGE_Entero_Mu_NC_000929(3),PHAGE_Vibrio_CP_T1_NC_019457(3),PHAGE_Pectob_ZF40_NC_019522(3),PHAGE_Entero_933W_NC_000924(3),PHAGE_Stx2_c_86_NC_008464(3),PHAGE_Shigel_Sf6_NC_005344(2),PHAGE_Escher_D108_NC_013594(2),PHAGE_Cronob_phiES15_NC_018454(2),PHAGE_Salmon_SPN3UB_NC_019545(2),PHAGE_Entero_N15_NC_001901(2),PHAGE_Salmon_SPN9CC_NC_017985(2),PHAGE_Entero_mEp460_NC_019716(2),PHAGE_Shigel_SfII_NC_021857(2),PHAGE_Pseudo_vB_PaeM_CEB_DP1_NC_041870(2),PHAGE_Entero_SfMu_NC_027382(2),PHAGE_Escher_HK639_NC_016158(2),PHAGE_Klebsi_JD001_NC_020204(2),PHAGE_Vibrio_vB_VchM_138_NC_019518(2),PHAGE_Klebsi_phiKO2_NC_005857(2),PHAGE_Shigel_Ss_VASD_NC_028685(2),PHAGE_Iodoba_phiPLPE_NC_011142(2),PHAGE_Entero_HK022_NC_002166(2),PHAGE_Entero_HK106_NC_019768(2),PHAGE_Entero_VT2phi_272_NC_028656(2),PHAGE_Entero_mEp237_NC_019704(2),PHAGE_Xantho_vB_XveM_DIBBI_NC_017981(2),PHAGE_Entero_SfI_NC_027339(2),PHAGE_Edward_GF_2_NC_026611(2),PHAGE_Yersin_PY54_NC_005069(2),PHAGE_Escher_phi191_NC_028660(2),PHAGE_Entero_DE3_NC_042057(1),PHAGE_Cronob_vB_CsaM_GAP32_NC_019401(1),PHAGE_Salmon_ST64B_NC_004313(1),PHAGE_Pseudo_H101_NC_029094(1),PHAGE_Gordon_BritBrat_NC_030942(1),PHAGE_Entero_mEp235_NC_019708(1),PHAGE_Shewan_1/41_NC_025458(1),PHAGE_Yersin_L_413C_NC_004745(1),PHAGE_Entero_WPhi_NC_005056(1),PHAGE_Entero_SfV_NC_003444(1),PHAGE_Entero_mEp234_NC_019715(1),PHAGE_Bdello_phi1422_NC_019525(1),PHAGE_Pseudo_Zigelbrucke_NC_041904(1),PHAGE_Entero_PsP3_NC_005340(1),PHAGE_Pseudo_vB_PsyM_KIL1_NC_030934(1),PHAGE_Pseudo_vB_PsyM_KIL4_NC_042054(1),PHAGE_Rhizob_RHEph04_NC_041908(1),PHAGE_Entero_HK97_NC_002167(1),PHAGE_Pseudo_vB_PaeM_E215_NC_042080(1),PHAGE_Pseudo_vB_PaeM_C2_10_Ab02_NC_042113(1),PHAGE_Entero_mEp213_NC_019720(1),PHAGE_Salmon_HK620_NC_002730(1),PHAGE_Stenot_S1_NC_011589(1),PHAGE_Entero_YYZ_2008_NC_011356(1),PHAGE_Salmon_118970_sal3_NC_031940(1),PHAGE_Mycoba_Mozy_NC_042323(1),PHAGE_Acinet_YMC11/12/R2315_NC_028855(1),PHAGE_Entero_P88_NC_026014(1),PHAGE_Pseudo_DL68_NC_028971(1),PHAGE_Pseudo_vB_PaeM_E217_NC_042079(1),PHAGE_Escher_PA28_NC_041935(1),PHAGE_Strept_SF3_NC_028952(1),PHAGE_Entero_ES18_NC_006949(1),PHAGE_Entero_vB_EcoP_ACG_C91_NC_019403(1),PHAGE_Entero_HK446_NC_019714(1),PHAGE_Aeromo_vB_AsaM_56_NC_019527(1),PHAGE_Entero_lambda_NC_001416(1),PHAGE_Salmon_118970_sal4_NC_030919(1),PHAGE_Entero_BP_4795_NC_004813(1),PHAGE_Vibrio_VBM1_NC_020850(1),PHAGE_Pseudo_phiMK_NC_031110(1),PHAGE_Entero_HK140_NC_019710(1),PHAGE_Stx2_c_1717_NC_011357(1),PHAGE_Acinet_IME_AB2_NC_041857(1),PHAGE_Acinet_YMC_13_01_C62_NC_024785(1),PHAGE_Salico_CGphi29_NC_020844(1),PHAGE_Mycoba_GUmbie_NC_023746(1),PHAGE_Pseudo_PA10_NC_041903(1),PHAGE_Salmon_SEN1_NC_029003(1),PHAGE_Entero_c_1_NC_019706(1),PHAGE_Salmon_vB_SemP_Emek_NC_018275(1),PHAGE_Pectob_CBB_NC_041878(1),PHAGE_Edward_MSW_3_NC_020082(1),PHAGE_Pseudo_PB1_NC_011810(1),PHAGE_Escher_phiV10_NC_007804(1),PHAGE_Rhizob_RHEph06_NC_027296(1),PHAGE_Edward_PEi21_NC_021342(1),PHAGE_Yersin_fHe_Yen9_04_NC_042116(1),PHAGE_Salmon_SEN22_NC_028696(1),PHAGE_Klebsi_vB_KpnM_KpV52_NC_041900(1),PHAGE_Acinet_AB1_NC_042028(1),PHAGE_Entero_P2_NC_001895(1),PHAGE_Escher_P13374_NC_018846(1),PHAGE_Clostr_phiCT19406A_NC_030950(1) 22 31.42% 49.07% 3 26.4Kb questionable(80) transposase,integrase,tail 189487-215968 1 38 24 0 63.1% 14 yes 18 PHAGE_Entero_phiP27_NC_003356(6),PHAGE_Entero_YYZ_2008_NC_011356(4),PHAGE_Salmon_118970_sal3_NC_031940(4),PHAGE_Entero_BP_4795_NC_004813(3),PHAGE_Stx2_c_1717_NC_011357(3),PHAGE_Salmon_ST64B_NC_004313(2),PHAGE_Burkho_BcepIL02_NC_012743(2),PHAGE_Shigel_POCJ13_NC_025434(2),PHAGE_Entero_mEp460_NC_019716(2),PHAGE_Burkho_DC1_NC_018452(2),PHAGE_Salmon_BPS17W1_NC_042097(2),PHAGE_Shigel_SfIV_NC_022749(2),PHAGE_Stx2_c_86_NC_008464(2),PHAGE_Entero_ST104_NC_005841(2),PHAGE_Burkho_Bcep176_NC_007497(2),PHAGE_Escher_phi191_NC_028660(2),PHAGE_Escher_P13374_NC_018846(2),PHAGE_Salmon_BPS15Q2_NC_031939(2),PHAGE_Shigel_Stx_NC_029120(2),PHAGE_Shigel_Sf6_NC_005344(1),PHAGE_Escher_D108_NC_013594(1),PHAGE_Synech_S_SSM7_NC_015287(1),PHAGE_Burkho_Bcep22_NC_005262(1),PHAGE_Salmon_103203_sal5_NC_031946(1),PHAGE_Escher_PA2_NC_028449(1),PHAGE_Staphy_80_NC_030652(1),PHAGE_Entero_mEpX1_NC_019709(1),PHAGE_Entero_SfV_NC_003444(1),PHAGE_Sodali_phiSG1_NC_007902(1),PHAGE_Staphy_SA1_NC_027991(1),PHAGE_Prochl_P_TIM68_NC_028955(1),PHAGE_Escher_HK75_NC_016160(1),PHAGE_Entero_HK225_NC_019717(1),PHAGE_Salmon_SPN9CC_NC_017985(1),PHAGE_Acinet_vB_AbaM_ME3_NC_041884(1),PHAGE_Salmon_BPS17L1_NC_042096(1),PHAGE_Entero_cdtI_NC_009514(1),PHAGE_Escher_4_NC_027364(1),PHAGE_Shigel_SfII_NC_021857(1),PHAGE_Entero_phiFL1A_NC_013646(1),PHAGE_Vibrio_X29_NC_024369(1),PHAGE_Escher_121Q_NC_025447(1),PHAGE_Escher_phage_NC_004913(1),PHAGE_Escher_pro483_NC_028943(1),PHAGE_Clostr_vB_CpeS_CP51_NC_021325(1),PHAGE_Salmon_SE1_NC_011802(1),PHAGE_Stx2_vB_EcoP_24B_NC_027984(1),PHAGE_Erwini_phiEt88_NC_015295(1),PHAGE_Entero_Min27_NC_010237(1),PHAGE_Escher_RCS47_NC_042128(1),PHAGE_Entero_Mu_NC_000929(1),PHAGE_Entero_VT2phi_272_NC_028656(1),PHAGE_Entero_HK140_NC_019710(1),PHAGE_Salmon_FelixO1_NC_005282(1),PHAGE_Bacill_G_NC_023719(1),PHAGE_Entero_mEp237_NC_019704(1),PHAGE_Pelagi_HTVC008M_NC_020484(1),PHAGE_Entero_phiFL3A_NC_013648(1),PHAGE_Entero_c_1_NC_019706(1),PHAGE_Entero_P1_NC_005856(1),PHAGE_Staphy_52A_NC_007062(1),PHAGE_Escher_JH2_NC_029023(1),PHAGE_Clostr_phiCT19406C_NC_029006(1),PHAGE_Entero_phiFL2A_NC_013643(1),PHAGE_Salmon_Si3_NC_041922(1) 6 15.78% 44.89% 4 40.9Kb intact(150) integrase,recombinase,portal,terminase,capsid,head,tail,lysin,plate 259384-300381 3 58 42 0 72.4% 16 yes 13 PHAGE_Entero_P88_NC_026014(29),PHAGE_Salmon_SEN5_NC_028701(16),PHAGE_Salmon_SEN4_NC_029015(15),PHAGE_Salmon_RE_2010_NC_019488(7),PHAGE_Salmon_Fels_2_NC_010463(5),PHAGE_Ralsto_RSA1_NC_009382(4),PHAGE_Erwini_ENT90_NC_019932(4),PHAGE_Burkho_KS5_NC_015265(4),PHAGE_Salmon_SP_004_NC_021774(3),PHAGE_Yersin_L_413C_NC_004745(3),PHAGE_Entero_PsP3_NC_005340(3),PHAGE_Entero_fiAA91_ss_NC_022750(3),PHAGE_Ralsto_RSY1_NC_025115(3),PHAGE_Entero_P2_NC_001895(3),PHAGE_Escher_pro483_NC_028943(3),PHAGE_Burkho_phiE202_NC_009234(3),PHAGE_Entero_WPhi_NC_005056(2),PHAGE_Pasteu_F108_NC_008193(2),PHAGE_Haemop_HP2_NC_003315(2),PHAGE_Aeromo_phiO18P_NC_009542(2),PHAGE_Burkho_KL3_NC_015266(2),PHAGE_Mannhe_vB_MhM_587AP1_NC_028898(2),PHAGE_Escher_pro147_NC_028896(2),PHAGE_Mannhe_phiMHaA1_NC_008201(2),PHAGE_Escher_P2_NC_041848(2),PHAGE_Escher_HK639_NC_016158(1),PHAGE_Escher_D108_NC_013594(1),PHAGE_Arthro_Colucci_NC_042000(1),PHAGE_Escher_PA2_NC_028449(1),PHAGE_Aeromo_vB_AsaM_56_NC_019527(1),PHAGE_Mannhe_vB_MhS_1152AP2_NC_028956(1),PHAGE_Klebsi_phiKO2_NC_005857(1),PHAGE_Entero_Mu_NC_000929(1),PHAGE_Erwini_vB_EamM_Caitlin_NC_031120(1),PHAGE_Burkho_KS10_NC_011216(1),PHAGE_Entero_VT2phi_272_NC_028656(1),PHAGE_Vibrio_8_NC_022747(1),PHAGE_Crocei_P2559Y_NC_023614(1),PHAGE_Stenot_Smp131_NC_023588(1),PHAGE_Burkho_phi52237_NC_007145(1),PHAGE_Mannhe_vB_MhS_535AP2_NC_028853(1),PHAGE_Vibrio_K139_NC_003313(1),PHAGE_Pseudo_phiCTX_NC_003278(1),PHAGE_Entero_EcP1_NC_019485(1),PHAGE_Haemop_HP1_NC_001697(1),PHAGE_Bacill_vB_BanS_Tsamsa_NC_023007(1),PHAGE_Entero_N15_NC_001901(1),PHAGE_Salmon_SEN1_NC_029003(1),PHAGE_Yersin_vB_YenP_ISAO8_NC_028850(1),PHAGE_Entero_P1_NC_005856(1),PHAGE_Sphing_PAU_NC_019521(1),PHAGE_Vibrio_vB_VpaM_MAR_NC_019722(1),PHAGE_Burkho_ST79_NC_021343(1),PHAGE_Erwini_vB_EamM_ChrisDB_NC_031126(1),PHAGE_Burkho_KS14_NC_015273(1),PHAGE_Vibrio_VHML_NC_004456(1),PHAGE_Erwini_vB_EamM_Kwan_NC_031010(1),PHAGE_Pseudo_B3_NC_006548(1),PHAGE_Vibrio_VP58.5_NC_027981(1),PHAGE_Entero_186_NC_001317(1),PHAGE_Arthro_PrincessTrina_NC_042053(1),PHAGE_Escher_phi191_NC_028660(1),PHAGE_Escher_P13374_NC_018846(1),PHAGE_Salmon_SJ46_NC_031129(1),PHAGE_Entero_SfMu_NC_027382(1) 29 50% 52.69% 5 43Kb intact(150) tail,plate,terminase,capsid,portal,integrase 496236-539313 0 45 42 0 93.3% 3 yes 5 PHAGE_Entero_P2_NC_001895(37),PHAGE_Entero_WPhi_NC_005056(29),PHAGE_Entero_fiAA91_ss_NC_022750(27),PHAGE_Escher_pro147_NC_028896(23),PHAGE_Yersin_L_413C_NC_004745(23),PHAGE_Escher_pro483_NC_028943(21),PHAGE_Escher_P2_NC_041848(17),PHAGE_Salmon_SP_004_NC_021774(4),PHAGE_Salmon_SEN5_NC_028701(3),PHAGE_Salmon_SEN4_NC_029015(3),PHAGE_Escher_RCS47_NC_042128(1),PHAGE_Aeromo_pIS4_A_NC_042037(1),PHAGE_Burkho_KS5_NC_015265(1),PHAGE_Entero_PsP3_NC_005340(1),PHAGE_Entero_SfMu_NC_027382(1),PHAGE_Vibrio_pYD38_A_NC_021534(1) 37 82.22% 50.82% 6 59.5Kb intact(150) tail,transposase,protease,portal,terminase,lysis,lysin,integrase 584463-643977 4 82 68 0 82.9% 14 yes 25 PHAGE_Entero_cdtI_NC_009514(22),PHAGE_Entero_mEp460_NC_019716(21),PHAGE_Entero_phiP27_NC_003356(16),PHAGE_Salmon_Fels_1_NC_010391(15),PHAGE_Phage_Gifsy_2_NC_010393(10),PHAGE_Entero_YYZ_2008_NC_011356(9),PHAGE_Entero_BP_4795_NC_004813(9),PHAGE_Phage_Gifsy_1_NC_010392(8),PHAGE_Entero_c_1_NC_019706(8),PHAGE_Entero_mEp213_NC_019720(6),PHAGE_Entero_DE3_NC_042057(4),PHAGE_Salmon_118970_sal3_NC_031940(4),PHAGE_Entero_lambda_NC_001416(4),PHAGE_Entero_HK630_NC_019723(4),PHAGE_Shigel_POCJ13_NC_025434(3),PHAGE_Escher_RCS47_NC_042128(3),PHAGE_Shigel_Ss_VASD_NC_028685(3),PHAGE_Shigel_Stx_NC_029120(3),PHAGE_Entero_P22_NC_002371(2),PHAGE_Shigel_Sf6_NC_005344(2),PHAGE_Escher_Av_05_NC_025830(2),PHAGE_Salmon_ST64B_NC_004313(2),PHAGE_Burkho_BcepIL02_NC_012743(2),PHAGE_Entero_HK629_NC_019711(2),PHAGE_Burkho_DC1_NC_018452(2),PHAGE_Shigel_SfIV_NC_022749(2),PHAGE_Entero_VT2phi_272_NC_028656(2),PHAGE_Stx2_c_1717_NC_011357(2),PHAGE_Entero_fiAA91_ss_NC_022750(2),PHAGE_Entero_P1_NC_005856(2),PHAGE_Entero_UAB_Phi20_NC_031019(2),PHAGE_Escher_P13374_NC_018846(2),PHAGE_Escher_vB_EcoM_ep3_NC_025430(1),PHAGE_Salmon_103203_sal5_NC_031946(1),PHAGE_Escher_vB_EcoM_ECO1230_10_NC_027995(1),PHAGE_Escher_PA2_NC_028449(1),PHAGE_Shewan_1/41_NC_025458(1),PHAGE_Erwini_vB_EamP_S6_NC_019514(1),PHAGE_Haemop_Aaphi23_NC_004827(1),PHAGE_Entero_mEpX1_NC_019709(1),PHAGE_Yersin_L_413C_NC_004745(1),PHAGE_Entero_SfV_NC_003444(1),PHAGE_Entero_phi80_NC_021190(1),PHAGE_Thermu_OH2_NC_021784(1),PHAGE_Cronob_phiES15_NC_018454(1),PHAGE_Bacill_phIS3501_NC_019502(1),PHAGE_Escher_vB_EcoM_ECOO78_NC_041926(1),PHAGE_Bacill_phiCM3_NC_023599(1),PHAGE_Salmon_SSU5_NC_018843(1),PHAGE_Haemop_SuMu_NC_019455(1),PHAGE_Acinet_WCHABP12_NC_041924(1),PHAGE_Pseudo_vB_PsyM_KIL4_NC_042054(1),PHAGE_Pseudo_vB_PsyM_KIL1_NC_030934(1),PHAGE_Salmon_HK620_NC_002730(1),PHAGE_Salmon_SPN9CC_NC_017985(1),PHAGE_Cronob_ENT39118_NC_019934(1),PHAGE_Shigel_SfII_NC_021857(1),PHAGE_Entero_P88_NC_026014(1),PHAGE_Salmon_64795_sal3_NC_031918(1),PHAGE_Escher_PA28_NC_041935(1),PHAGE_Aeromo_pIS4_A_NC_042037(1),PHAGE_Vibrio_X29_NC_024369(1),PHAGE_Lactoc_TP901_1_NC_002747(1),PHAGE_Entero_ES18_NC_006949(1),PHAGE_Entero_SfMu_NC_027382(1),PHAGE_Bacter_APSE_2_NC_011551(1),PHAGE_Acinet_WCHABP1_NC_041966(1),PHAGE_Stx2_vB_EcoP_24B_NC_027984(1),PHAGE_Entero_Mu_NC_000929(1),PHAGE_Entero_mEp390_NC_019721(1),PHAGE_Brocho_BL3_NC_015254(1),PHAGE_Pseudo_phi297_NC_016762(1),PHAGE_Entero_HK140_NC_019710(1),PHAGE_Bacill_SPbeta_NC_001884(1),PHAGE_Bacill_G_NC_023719(1),PHAGE_Entero_HK633_NC_019719(1),PHAGE_Acinet_AP22_NC_017984(1),PHAGE_Vibrio_pYD38_A_NC_021534(1),PHAGE_Geobac_E3_NC_029073(1),PHAGE_Salmon_g341c_NC_013059(1),PHAGE_Entero_933W_NC_000924(1),PHAGE_Pseudo_F10_NC_007805(1),PHAGE_Stx2_c_86_NC_008464(1),PHAGE_Halocy_JM_2012_NC_017975(1),PHAGE_Salmon_IME207_NC_031924(1),PHAGE_Entero_SfI_NC_027339(1),PHAGE_Escher_TL_2011c_NC_019442(1),PHAGE_Plankt_PaV_LD_NC_016564(1),PHAGE_Entero_ST104_NC_005841(1),PHAGE_Escher_phi191_NC_028660(1),PHAGE_Entero_mEpX2_NC_019705(1),PHAGE_Salmon_epsilon34_NC_011976(1) 23 26.82% 50.87% 7 9.1Kb incomplete(30) transposase,plate 1185999-1195109 0 10 7 0 70% 3 no 6 PHAGE_Bacill_G_NC_023719(2),PHAGE_Bacill_SIOphi_NC_042133(2),PHAGE_Bacill_vB_BanS_Tsamsa_NC_023007(1),PHAGE_Bacill_BCD7_NC_019515(1),PHAGE_Entero_P1_NC_005856(1),PHAGE_Mycoba_Bongo_NC_041970(1),PHAGE_Mycoba_Dusk_NC_029079(1),PHAGE_Shigel_SfIV_NC_022749(1),PHAGE_Escher_RCS47_NC_042128(1),PHAGE_Bacill_Bp8p_C_NC_029121(1),PHAGE_Mycoba_Contagion_NC_022065(1),PHAGE_Lactoc_phiL47_NC_023574(1),PHAGE_Plankt_PaV_LD_NC_016564(1),PHAGE_Gordon_OneUp_NC_030917(1),PHAGE_Bacill_SP_10_NC_019487(1),PHAGE_Mycoba_PegLeg_NC_021299(1),PHAGE_Entero_phiEF24C_NC_009904(1),PHAGE_Bacill_Mgbh1_NC_041879(1),PHAGE_Mycoba_Myrna_NC_011273(1),PHAGE_Mycoba_SirDuracell_NC_041987(1),PHAGE_Bacill_SPbeta_NC_001884(1),PHAGE_Mycoba_Adler_NC_023591(1),PHAGE_Mycoba_Mindy_NC_029093(1),PHAGE_Lactoc_WRP3_NC_027341(1) 2 20% 49.58% 8 7.8Kb incomplete(60) transposase,envelope 1304113-1311982 0 7 6 0 85.7% 1 no 5 PHAGE_Escher_slur01_NC_028831(1),PHAGE_Escher_Seurat_NC_027378(1),PHAGE_Pseudo_PaMx25_NC_041953(1),PHAGE_Strept_20617_NC_023503(1),PHAGE_Entero_P1_NC_005856(1),PHAGE_Pseudo_NP1_NC_031058(1),PHAGE_Shigel_SfII_NC_021857(1),PHAGE_Shigel_SfIV_NC_022749(1),PHAGE_Escher_RCS47_NC_042128(1),PHAGE_Entero_CAjan_NC_028776(1) 2 14.28% 47.66% 9 46.6Kb intact(150) integrase,lysin,lysis,terminase,portal,protease,tail 3053733-3100350 0 51 49 0 96% 2 yes 8 PHAGE_Entero_mEp460_NC_019716(37),PHAGE_Entero_cdtI_NC_009514(37),PHAGE_Entero_SfV_NC_003444(17),PHAGE_Salmon_Fels_1_NC_010391(11),PHAGE_Shigel_SfIV_NC_022749(10),PHAGE_Entero_c_1_NC_019706(10),PHAGE_Phage_Gifsy_1_NC_010392(9),PHAGE_Phage_Gifsy_2_NC_010393(8),PHAGE_Shigel_SfII_NC_021857(8),PHAGE_Entero_mEp213_NC_019720(6),PHAGE_Salmon_118970_sal3_NC_031940(6),PHAGE_Salmon_ST64B_NC_004313(5),PHAGE_Entero_lambda_NC_001416(5),PHAGE_Entero_DE3_NC_042057(4),PHAGE_Entero_HK630_NC_019723(3),PHAGE_Entero_HK629_NC_019711(2),PHAGE_Stx2_c_1717_NC_011357(2),PHAGE_Entero_phiP27_NC_003356(2),PHAGE_Salmon_SPN9CC_NC_017985(2),PHAGE_Entero_YYZ_2008_NC_011356(2),PHAGE_Entero_SfI_NC_027339(2),PHAGE_Klebsi_phiKO2_NC_005857(1),PHAGE_Salmon_118970_sal4_NC_030919(1),PHAGE_Entero_BP_4795_NC_004813(1),PHAGE_Entero_phi80_NC_021190(1),PHAGE_Entero_VT2phi_272_NC_028656(1),PHAGE_Entero_HK544_NC_019767(1),PHAGE_Entero_JenK1_NC_029021(1),PHAGE_Entero_HK140_NC_019710(1),PHAGE_Salmon_vB_SosS_Oslo_NC_018279(1),PHAGE_Entero_9g_NC_024146(1),PHAGE_Escher_vB_EcoM_PhAPEC2_NC_024794(1),PHAGE_Salmon_SPN3UB_NC_019545(1),PHAGE_Escher_3_NC_041863(1),PHAGE_Pseudo_PAJU2_NC_011373(1),PHAGE_Salmon_g341c_NC_013059(1),PHAGE_Salmon_vB_SemP_Emek_NC_018275(1),PHAGE_Entero_933W_NC_000924(1),PHAGE_Entero_Sf101_NC_027398(1),PHAGE_Pseudo_F10_NC_007805(1),PHAGE_Stx2_II_NC_004914(1),PHAGE_Pseudo_vB_PaeS_PAO1_Ab18_NC_026594(1),PHAGE_Strept_VWB_NC_005345(1),PHAGE_Salmon_SEN22_NC_028696(1),PHAGE_Escher_phi191_NC_028660(1),PHAGE_Escher_PA28_NC_041935(1),PHAGE_Bordet_BPP_1_NC_005357(1),PHAGE_Salmon_epsilon34_NC_011976(1),PHAGE_Escher_6_NC_041864(1),PHAGE_Shigel_SHSML_52_1_NC_031090(1),PHAGE_Escher_APCEc01_NC_029091(1) 38 72.54% 50.03% 10 30.9Kb intact(120) integrase,transposase,tail 3262589-3293523 2 44 41 0 93.1% 3 yes 25 PHAGE_Stx2_vB_EcoP_24B_NC_027984(10),PHAGE_Entero_933W_NC_000924(7),PHAGE_Stx2_II_NC_004914(6),PHAGE_Stx2_c_86_NC_008464(6),PHAGE_Entero_VT2_Sakai_NC_000902(5),PHAGE_Escher_PA28_NC_041935(5),PHAGE_Escher_phage_NC_004913(5),PHAGE_Entero_Min27_NC_010237(5),PHAGE_Stx2_c_1717_NC_011357(5),PHAGE_Entero_SfI_NC_027339(5),PHAGE_Entero_DE3_NC_042057(4),PHAGE_Entero_HK629_NC_019711(4),PHAGE_Escher_RCS47_NC_042128(4),PHAGE_Entero_BP_4795_NC_004813(4),PHAGE_Entero_mEpX1_NC_019709(3),PHAGE_Entero_Sf101_NC_027398(3),PHAGE_Salmon_HK620_NC_002730(3),PHAGE_Entero_HK106_NC_019768(3),PHAGE_Entero_phiP27_NC_003356(3),PHAGE_Entero_c_1_NC_019706(3),PHAGE_Escher_Av_05_NC_025830(2),PHAGE_Entero_mEp235_NC_019708(2),PHAGE_Entero_mEp234_NC_019715(2),PHAGE_Entero_HK542_NC_019769(2),PHAGE_Escher_HK75_NC_016160(2),PHAGE_Salmon_BTP1_NC_042346(2),PHAGE_Shigel_POCJ13_NC_025434(2),PHAGE_Entero_N15_NC_001901(2),PHAGE_Entero_YYZ_2008_NC_011356(2),PHAGE_Entero_cdtI_NC_009514(2),PHAGE_Entero_SfMu_NC_027382(2),PHAGE_Escher_HK639_NC_016158(2),PHAGE_Entero_HK446_NC_019714(2),PHAGE_Klebsi_phiKO2_NC_005857(2),PHAGE_Entero_Mu_NC_000929(2),PHAGE_Entero_lambda_NC_001416(2),PHAGE_Salmon_118970_sal4_NC_030919(2),PHAGE_Entero_VT2phi_272_NC_028656(2),PHAGE_Salmon_vB_SosS_Oslo_NC_018279(2),PHAGE_Entero_HK633_NC_019719(2),PHAGE_Entero_P1_NC_005856(2),PHAGE_Salmon_g341c_NC_013059(2),PHAGE_Salmon_ST160_NC_014900(2),PHAGE_Salmon_SEN22_NC_028696(2),PHAGE_Entero_HK630_NC_019723(2),PHAGE_Shigel_Stx_NC_029120(2),PHAGE_Shigel_Sf6_NC_005344(1),PHAGE_Escher_D108_NC_013594(1),PHAGE_Salmon_103203_sal5_NC_031946(1),PHAGE_Escher_PA2_NC_028449(1),PHAGE_Yersin_L_413C_NC_004745(1),PHAGE_Haemop_Aaphi23_NC_004827(1),PHAGE_Phage_Gifsy_1_NC_010392(1),PHAGE_Pseudo_MD8_NC_031091(1),PHAGE_Acinet_WCHABP12_NC_041924(1),PHAGE_Pseudo_vB_PsyM_KIL1_NC_030934(1),PHAGE_Pseudo_vB_PsyM_KIL4_NC_042054(1),PHAGE_Entero_HK97_NC_002167(1),PHAGE_Salmon_SPN9CC_NC_017985(1),PHAGE_Entero_mEp460_NC_019716(1),PHAGE_Shigel_SfII_NC_021857(1),PHAGE_Pseudo_phi2_NC_030931(1),PHAGE_Entero_ES18_NC_006949(1),PHAGE_Acinet_WCHABP1_NC_041966(1),PHAGE_Erwini_phiEt88_NC_015295(1),PHAGE_Shigel_SfIV_NC_022749(1),PHAGE_Entero_HK022_NC_002166(1),PHAGE_Entero_HK544_NC_019767(1),PHAGE_Entero_HK140_NC_019710(1),PHAGE_Pseudo_vB_PaeP_Tr60_Ab31_NC_023575(1),PHAGE_Salmon_vB_SemP_Emek_NC_018275(1),PHAGE_Escher_phi191_NC_028660(1),PHAGE_Entero_mEpX2_NC_019705(1),PHAGE_Salmon_epsilon34_NC_011976(1) 10 22.72% 48.14% 11 53.9Kb intact(150) integrase,transposase,terminase,portal,head,capsid,tail,plate 3920754-3974720 4 71 60 0 84.5% 11 yes 28 PHAGE_Salmon_118970_sal3_NC_031940(23),PHAGE_Entero_phiP27_NC_003356(22),PHAGE_Shigel_SfII_NC_021857(12),PHAGE_Shigel_SfIV_NC_022749(12),PHAGE_Salmon_ST64B_NC_004313(11),PHAGE_Entero_SfI_NC_027339(8),PHAGE_Phage_Gifsy_1_NC_010392(5),PHAGE_Shigel_POCJ13_NC_025434(5),PHAGE_Entero_SfV_NC_003444(4),PHAGE_Phage_Gifsy_2_NC_010393(4),PHAGE_Entero_mEp237_NC_019704(4),PHAGE_Shigel_Stx_NC_029120(4),PHAGE_Entero_mEp235_NC_019708(3),PHAGE_Cronob_phiES15_NC_018454(3),PHAGE_Salmon_SPN3UB_NC_019545(3),PHAGE_Entero_SfMu_NC_027382(3),PHAGE_Escher_RCS47_NC_042128(3),PHAGE_Pectob_ZF40_NC_019522(3),PHAGE_Escher_Av_05_NC_025830(2),PHAGE_Bacill_phIS3501_NC_019502(2),PHAGE_Entero_HK225_NC_019717(2),PHAGE_Entero_cdtI_NC_009514(2),PHAGE_Entero_ES18_NC_006949(2),PHAGE_Entero_Mu_NC_000929(2),PHAGE_Entero_lambda_NC_001416(2),PHAGE_Stx2_c_1717_NC_011357(2),PHAGE_Entero_fiAA91_ss_NC_022750(2),PHAGE_Entero_P1_NC_005856(2),PHAGE_Entero_933W_NC_000924(2),PHAGE_Entero_UAB_Phi20_NC_031019(2),PHAGE_Entero_DE3_NC_042057(1),PHAGE_Mannhe_vB_MhS_587AP2_NC_028743(1),PHAGE_Entero_P22_NC_002371(1),PHAGE_Shigel_Sf6_NC_005344(1),PHAGE_Escher_D108_NC_013594(1),PHAGE_Gordon_Nymphadora_NC_031061(1),PHAGE_Salmon_103203_sal5_NC_031946(1),PHAGE_Gordon_BritBrat_NC_030942(1),PHAGE_Yersin_L_413C_NC_004745(1),PHAGE_Entero_WPhi_NC_005056(1),PHAGE_Escher_TL_2011b_NC_019445(1),PHAGE_Entero_HK629_NC_019711(1),PHAGE_Thermu_OH2_NC_021784(1),PHAGE_Pseudo_phiPSA1_NC_024365(1),PHAGE_Burkho_KS9_NC_013055(1),PHAGE_Bacill_phiCM3_NC_023599(1),PHAGE_Salmon_BTP1_NC_042346(1),PHAGE_Entero_HK97_NC_002167(1),PHAGE_Bacill_BtCS33_NC_018085(1),PHAGE_Escher_pro147_NC_028896(1),PHAGE_Stx2_II_NC_004914(1),PHAGE_Entero_YYZ_2008_NC_011356(1),PHAGE_Mycoba_Mozy_NC_042323(1),PHAGE_Xantho_CP2_NC_020205(1),PHAGE_Entero_mEp460_NC_019716(1),PHAGE_Burkho_phi1026b_NC_005284(1),PHAGE_Entero_VT2_Sakai_NC_000902(1),PHAGE_Salmon_SPN1S_NC_016761(1),PHAGE_Escher_PA28_NC_041935(1),PHAGE_Escher_HK639_NC_016158(1),PHAGE_Entero_Tyrion_NC_031077(1),PHAGE_Salmon_SE1_NC_011802(1),PHAGE_Stx2_vB_EcoP_24B_NC_027984(1),PHAGE_Entero_Min27_NC_010237(1),PHAGE_Erwini_phiEt88_NC_015295(1),PHAGE_Salmon_118970_sal4_NC_030919(1),PHAGE_Entero_HK106_NC_019768(1),PHAGE_Entero_HK022_NC_002166(1),PHAGE_Entero_mEp390_NC_019721(1),PHAGE_Entero_BP_4795_NC_004813(1),PHAGE_Entero_VT2phi_272_NC_028656(1),PHAGE_Bacill_SPbeta_NC_001884(1),PHAGE_Bacill_G_NC_023719(1),PHAGE_Salico_CGphi29_NC_020844(1),PHAGE_Salmon_SEN34_NC_028699(1),PHAGE_Brucel_BiPBO1_NC_031264(1),PHAGE_Mycoba_GUmbie_NC_023746(1),PHAGE_Salmon_vB_SemP_Emek_NC_018275(1),PHAGE_Stx2_c_86_NC_008464(1),PHAGE_Plankt_PaV_LD_NC_016564(1),PHAGE_Salmon_ST160_NC_014900(1),PHAGE_Salmon_SEN22_NC_028696(1),PHAGE_Escher_phi191_NC_028660(1),PHAGE_Entero_HK630_NC_019723(1),PHAGE_Entero_P2_NC_001895(1),PHAGE_Salmon_epsilon15_NC_004775(1) 23 32.39% 49.93% 12 33.7Kb intact(150) integrase,portal,terminase,capsid,tail,lysis,lysin,plate 4062031-4095731 0 44 38 0 86.3% 6 yes 3 PHAGE_Salmon_Fels_2_NC_010463(35),PHAGE_Salmon_RE_2010_NC_019488(32),PHAGE_Erwini_ENT90_NC_019932(13),PHAGE_Entero_186_NC_001317(11),PHAGE_Entero_PsP3_NC_005340(10),PHAGE_Salmon_SEN1_NC_029003(9),PHAGE_Salmon_SP_004_NC_021774(5),PHAGE_Escher_P2_NC_041848(4),PHAGE_Escher_pro483_NC_028943(4),PHAGE_Ralsto_RSA1_NC_009382(3),PHAGE_Entero_WPhi_NC_005056(3),PHAGE_Ralsto_RSY1_NC_025115(3),PHAGE_Burkho_KS5_NC_015265(3),PHAGE_Burkho_KS14_NC_015273(3),PHAGE_Entero_fiAA91_ss_NC_022750(2),PHAGE_Salmon_SEN5_NC_028701(2),PHAGE_Entero_P2_NC_001895(2),PHAGE_Escher_D108_NC_013594(1),PHAGE_Shigel_SfIV_NC_022749(1),PHAGE_Entero_Mu_NC_000929(1),PHAGE_Entero_HK106_NC_019768(1),PHAGE_Pasteu_F108_NC_008193(1),PHAGE_Haemop_HP2_NC_003315(1),PHAGE_Aeromo_phiO18P_NC_009542(1),PHAGE_Pseudo_YMC11/02/R656_NC_028657(1),PHAGE_Salmon_SEN4_NC_029015(1),PHAGE_Pseudo_phiCTX_NC_003278(1),PHAGE_Erwini_vB_EamP_Frozen_NC_031062(1),PHAGE_Erwini_Ea9_2_NC_023579(1),PHAGE_Entero_HK97_NC_002167(1),PHAGE_Entero_P1_NC_005856(1),PHAGE_Entero_c_1_NC_019706(1),PHAGE_Pseudo_PAJU2_NC_011373(1),PHAGE_Entero_mEp213_NC_019720(1),PHAGE_Burkho_ST79_NC_021343(1),PHAGE_Edward_PEi21_NC_021342(1),PHAGE_Entero_P88_NC_026014(1),PHAGE_Pseudo_YMC11/06/C171_PPU_BP_NC_030923(1) 35 79.54% 50.89%